BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044791
(623 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225428796|ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
[Vitis vinifera]
Length = 593
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/639 (62%), Positives = 460/639 (71%), Gaps = 62/639 (9%)
Query: 1 MASLMAIRCLRSRRHSSLTKVRFTSLQYSYLNHPQNNIIGKTLTLSLAKTLSTSAV--EY 58
MASL++IR R+ S L+KV Y +H +L KTLSTSAV +Y
Sbjct: 1 MASLLSIRRARTPLFSFLSKV-----PSPYSSH---------FIFTLTKTLSTSAVPNDY 46
Query: 59 NTPPPQPPQSPLSDSRAFPDQSNFNNNQWASQQEQNNHLSYPNQGHGYATNQYSSDRNYP 118
P QPP P R F DQ N + N W SQ + ++ + N G +++YP
Sbjct: 47 QRPQQQPPSEP----RDFQDQRNPSYN-WNSQTQSQSYPQHMNYG--------DQNQSYP 93
Query: 119 NRGYPNQGQRLPIQGQAYPQQHQPGNHQYQNPS--NNQEYQRSNYQGQR-----SPNQGQ 171
NRGYPNQGQ YPQ P Q P+ Q R N+Q Q +P+ GQ
Sbjct: 94 NRGYPNQGQ-------GYPQHENPNQWNRQTPTYPQPQNPSRPNHQNQYYPPTGNPSLGQ 146
Query: 172 VYPHQQQPH--SNQYQNPG-----NQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQ 224
YP Q+ P+ + Q+QNP NQN+ QP S N +NQ NQ YP + Q +Q
Sbjct: 147 GYPQQRSPNQWNPQHQNPSHLNNQNQNYPQPGSRNLPSNQ-NQSYPHQGSPSQW---NNQ 202
Query: 225 IPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLF 284
PNQ V N ++ P PSVADL LCQEGKVKEA+ELM+KGV+ADA CFY LF
Sbjct: 203 NPNQAQIVENQVSHAP-------PSVADLMNLCQEGKVKEAVELMEKGVRADAQCFYALF 255
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
CG+PK E AKKVHD+FLQST R DL LNNKV+EMYG CGSMTDARRVFDHMA+R MD
Sbjct: 256 NSCGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANRDMD 315
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SWHLMINGYA+N +GD+GLQL+EQMRKLGL+PNEQTFLAV S C SA+A+EE FIHFESM
Sbjct: 316 SWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESM 375
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
K+E+GI+P EHY+G++ VLGK GH+ EA++FIEQ +P EP+A WEAL NYA+IHGDID
Sbjct: 376 KTEYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQ-MPVEPSAVVWEALMNYAKIHGDID 434
Query: 465 LEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL 524
LEDHAEELMV LDP KA K PTPPPKKRTAI++LDGK+RL EFRNPTLY+DDEKLK+L
Sbjct: 435 LEDHAEELMVALDPLKAVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSL 494
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
N MKE+ YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG
Sbjct: 495 NGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 554
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNAIKIMS+IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 555 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 593
>gi|147834943|emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
Length = 627
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/608 (63%), Positives = 437/608 (71%), Gaps = 70/608 (11%)
Query: 43 LTLSLAKTLSTSAV--EYNTPPPQPPQSPLSDSRAFPDQSNFNNNQWASQQEQNNHLSYP 100
+L KTLSTSAV +Y P QPP P R F Q N N N W SQ + ++ +
Sbjct: 63 FIFTLTKTLSTSAVPNDYQRPQQQPPSEP----RDFQHQRNPNYN-WNSQTQSQSYPQHM 117
Query: 101 NQGHGYATNQYSSDRNYPNRGYPNQGQRLPIQGQAYPQQHQPGNHQYQNPSNNQEYQRSN 160
N G +++YPNRGYPN QGQ YPQ P Q P+
Sbjct: 118 NYG--------EQNQSYPNRGYPN-------QGQGYPQHGSPNQWNRQTPT--------- 153
Query: 161 YQGQRSPNQGQVYPHQQQP----HSNQYQNP-GN----QNFQQPRSPNQWN--------- 202
YP Q P H NQY P GN Q + Q RSPNQWN
Sbjct: 154 ------------YPQPQNPSRPNHQNQYYPPTGNPSLGQGYPQQRSPNQWNPQHQNPSPL 201
Query: 203 NQQNQGYPQ--ARN--SYQQVSPGHQ-IPNQLNNVPNNMNQCPAGDQV--LPPSVADLAR 255
N QN+ YPQ +RN S Q S HQ P+Q NN N Q +QV PPSVADL
Sbjct: 202 NNQNENYPQPGSRNLPSNQNQSYPHQGSPSQWNNQNTNQAQI-VENQVSHAPPSVADLMN 260
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LCQEGKVKEA+ELM+KGV+ADA CFY LF CG+PK E AKKVHD+FLQST R DL LN
Sbjct: 261 LCQEGKVKEAVELMEKGVRADAQCFYALFNSCGSPKLLEEAKKVHDFFLQSTFRSDLQLN 320
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
NKV+EMYG CGSMTDARRVFDHM +R MDSWHLMINGYA+N +GD+GLQL+EQMRKLGL+
Sbjct: 321 NKVLEMYGNCGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLE 380
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PNEQTFLAV S C SA+A+EE FIHFESMK+E+GI+P EHY+G++ VLGK GH+ EA++
Sbjct: 381 PNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKE 440
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRT 495
FIEQ +P EP+A WEAL NYA+IHGDIDLEDHAEELMV LDP KA K PTPPPKKRT
Sbjct: 441 FIEQ-MPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKKRT 499
Query: 496 AISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
AI++LDGK+RL EFRNPTLY+DDEKLK+LN MKE+ YVPDTRYVLHDIDQEAKEQALLYH
Sbjct: 500 AINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVLHDIDQEAKEQALLYH 559
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS+IVGRELIVRDNKRFHHFKDG
Sbjct: 560 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDG 619
Query: 616 KCSCGDYW 623
KCSCGDYW
Sbjct: 620 KCSCGDYW 627
>gi|449438679|ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 688
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/707 (54%), Positives = 463/707 (65%), Gaps = 103/707 (14%)
Query: 1 MASLMAIRCLRSRRHSSLTKVRF---TSLQYSYLNHPQNNIIGKTLTLSLAKTLSTSAV- 56
MASLMA+R R+ S KVR+ + +++ N T +L KTLSTSA+
Sbjct: 1 MASLMAVRRARTPIIVSSFKVRYPLSSCFTFTFRNQ----------TETLIKTLSTSAIP 50
Query: 57 -----------------------EYNTPPPQPPQSPLSDSRAFPDQSNFNNNQWASQQEQ 93
++ +P P S + ++F S F N +A Q
Sbjct: 51 NDFSNFPSSPQQPSSSSPSYRQPQWGSPSQVNPPSENFNHQSF---SEFQNRDYAQQGSH 107
Query: 94 NNHLSY--------PN-----QGHGYATNQYSSDRNYPNRGYPNQGQRLPIQGQAYPQQH 140
N L+Y PN QG Y+ ++ N PN+ Q P Q++PQ
Sbjct: 108 GNQLNYRSQHQSPQPNPGFSRQGQSYSQVGKTNSWNPPNQSSQYQNPSQPPPNQSFPQYQ 167
Query: 141 QPGNH-------QYQNPSN----NQEYQRSNYQGQRSPNQ-GQVYPHQQQP--------- 179
P QYQNPS NQ Y S YQ PN Q YP Q P
Sbjct: 168 NPSQPPPNQSYPQYQNPSQTNPPNQSY--SQYQNPSQPNAPNQRYPQYQNPSQPNPPNQS 225
Query: 180 --------HSN-------QYQNPG-----NQNFQQPRSPNQWNNQQNQGYPQARNSYQQV 219
SN QYQNP N N+QQ R PNQWNNQ NQ +PQ +
Sbjct: 226 HPQYQNPSQSNPPNQSYPQYQNPSQPNPPNFNYQQQRGPNQWNNQ-NQEHPQFGRP-EHR 283
Query: 220 SPGHQIPNQLNN---VPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKAD 276
+P + NQLNN + + Q A + ++ P + +L R C EGK+KEA+EL+ +GVKAD
Sbjct: 284 NPQAENSNQLNNQAGIQRDGTQNQAPNALVSP-IDELRRFCGEGKLKEAVELLKQGVKAD 342
Query: 277 ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD 336
CF+ LFELCG K ++NAK VHDYFLQS+ R DL LNN+V+EMYG+CGSM+DARRVFD
Sbjct: 343 VDCFHLLFELCGKSKSFDNAKVVHDYFLQSSCRSDLQLNNEVLEMYGRCGSMSDARRVFD 402
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
HM DRS+DSWHLM+ GYADNGLGDEGL+LFE M+ LGLQPN QTFL V SAC SA+A+EE
Sbjct: 403 HMPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYVMSACASANAVEE 462
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
F++FESMK+++ I+P T HYLGL+G+LG+ GH+ EA +++E KLP EPT E WE L+NY
Sbjct: 463 GFLYFESMKNDYHITPDTNHYLGLLGILGEPGHIHEAFEYVE-KLPMEPTVEVWETLKNY 521
Query: 457 ARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR 516
ARIHGD+DLED+AEEL+VDLDP+KA KI TPPPKKR+AIS+LDGK+R+VEFRNPTLY+
Sbjct: 522 ARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKKRSAISMLDGKNRIVEFRNPTLYK 581
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
DDEKLKAL MKE YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI
Sbjct: 582 DDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 641
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 642 IKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 688
>gi|449519292|ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g15690-like [Cucumis sativus]
Length = 588
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/659 (55%), Positives = 441/659 (66%), Gaps = 107/659 (16%)
Query: 1 MASLMAIRCLRSRRHSSLTKVRF---TSLQYSYLNHPQNNIIGKTLTLSLAKTLSTSAV- 56
MASLMA+R R+ S KVR+ + +++ N T +L KTLSTSA+
Sbjct: 1 MASLMAVRRARTPIIVSSFKVRYPLSSCFTFTFRNQ----------TETLIKTLSTSAIP 50
Query: 57 -----------------------EYNTPPPQPPQSPLSDSRAFPDQSNFNNNQWASQQEQ 93
++ +P P S + ++F S F N +A Q
Sbjct: 51 NDFSNFPSSPQQPSSSSPSYRQPQWGSPSQVNPPSENFNHQSF---SEFQNRDYAQQGSH 107
Query: 94 NNHLSYPNQGHGYATNQYSSDRNYPNRGYPNQGQRL--PIQGQAYPQQHQPGNHQYQNPS 151
N L+Y +Q+ S + PN G+ QGQ P+ Q+YPQ YQNPS
Sbjct: 108 GNQLNY--------RSQHQSPQ--PNPGFSRQGQSYSQPLPNQSYPQ--------YQNPS 149
Query: 152 NNQEYQRSNYQGQRSPNQGQVYPHQQQPHSNQYQNPGNQNFQQPRSPNQWNNQQNQ---- 207
QP NP N N+QQ R PNQWNNQ +
Sbjct: 150 --------------------------QP------NPPNFNYQQQRGPNQWNNQNQEHPQF 177
Query: 208 GYPQARNSYQQVSPGHQIPNQLNN---VPNNMNQCPAGDQVLPPSVADLARLCQEGKVKE 264
G P+ RN P + NQLNN + + Q A + ++ P + +L R C EGK+KE
Sbjct: 178 GRPEHRN------PQAENSNQLNNQAGIQRDGTQNQAPNALVSP-IDELRRFCGEGKLKE 230
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
A+EL+ +GVKAD CF+ LFELCG K ++NAK VHDYFLQS+ R DL LNN+V+EMYG+
Sbjct: 231 AVELLKQGVKADVDCFHLLFELCGKSKSFDNAKVVHDYFLQSSCRSDLQLNNEVLEMYGR 290
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CGSM+DARRVFDHM DRS+DSWHLM+ GYADNGLGDEGL+LFE M+ LGLQPN QTFL V
Sbjct: 291 CGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYV 350
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SAC SA+A+EE F++FESMK+++ I+P T HYLGL+G+LG+ GH+ EA +++E KLP E
Sbjct: 351 MSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGHIHEAFEYVE-KLPME 409
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
PT E WE L+NYARIHGD+DLED+AEEL+VDLDP+KA KI TPPPK +AIS+LDGK+
Sbjct: 410 PTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKNXSAISMLDGKN 469
Query: 505 RLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
R+VEFRNPTLY+DD KLKAL MKE YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG
Sbjct: 470 RIVEFRNPTLYKDDXKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 529
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 530 LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 588
>gi|357475405|ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509043|gb|AES90185.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 565
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/435 (70%), Positives = 356/435 (81%), Gaps = 12/435 (2%)
Query: 189 NQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPP 248
N NFQ P PN+ NQ NQ PQ N Q +P +Q PN Q P PP
Sbjct: 143 NPNFQPPNGPNRGINQ-NQWNPQNGNLNQFQNPNNQF-----QTPNVQEQAPP-----PP 191
Query: 249 SVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
S+ DL R CQEGKVKEA+ELM+KG+KADA+CF LF+LCG K E+AKKVHDYFLQST
Sbjct: 192 SIVDLTRFCQEGKVKEALELMEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTF 251
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R D ++NKVIEMYG C SMTDARRVFDHM +R+MDSWH+MI GYA++ +GDEGLQLFEQ
Sbjct: 252 RSDFKMHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQ 311
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M +LGL+ +T LAV SACGSA+A+E+A+I+ ESMKS++GI PG EHY+GL+ VLG+ G
Sbjct: 312 MNELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSG 371
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+L EA++FIEQ LPFEPT +E L+NYARIHGD+DLEDH EEL+V LDPSKA KIPT
Sbjct: 372 YLKEAEEFIEQ-LPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPT 430
Query: 489 PPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAK 548
PPPKK TAIS+LDGK+R++E++NPTLY+DDEKL A+N MK++ YVPDTRYVLHDIDQEAK
Sbjct: 431 PPPKKYTAISMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAK 490
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
EQALLYHSERLAIAYGLISTP RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR
Sbjct: 491 EQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 550
Query: 609 FHHFKDGKCSCGDYW 623
FHHFKDGKCSCGDYW
Sbjct: 551 FHHFKDGKCSCGDYW 565
>gi|388508872|gb|AFK42502.1| unknown [Medicago truncatula]
Length = 565
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/435 (70%), Positives = 356/435 (81%), Gaps = 12/435 (2%)
Query: 189 NQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPP 248
N NFQ P PN+ NQ NQ PQ N Q +P +Q PN Q P PP
Sbjct: 143 NPNFQPPNGPNRGINQ-NQWNPQNGNLNQFQNPNNQF-----QTPNVQEQAPP-----PP 191
Query: 249 SVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
S+ DL R CQEGKVKEA+ELM+KG+KADA+CF LF+LCG K E+AKKVHDYFLQST
Sbjct: 192 SIVDLTRFCQEGKVKEALELMEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTF 251
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R D ++NKVIEMYG C SMTDARRVFDHM +R+MDSWH+MI GYA++ +GDEGLQLFEQ
Sbjct: 252 RSDFKMHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQ 311
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M +LGL+ +T LAV SACGSA+A+E+A+I+ ESMKS++GI PG EHY+GL+ VLG+ G
Sbjct: 312 MNELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSG 371
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+L EA++FIEQ LPFEPT +E L+NYARIHGD+DLEDH EEL+V LDPSKA KIPT
Sbjct: 372 YLKEAEEFIEQ-LPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPT 430
Query: 489 PPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAK 548
PPPKK TAIS+LDGK+R++E++NPTLY+DDEKL A+N MK++ YVPDTRYVLHDIDQEAK
Sbjct: 431 PPPKKYTAISMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAK 490
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
EQALLYHSERLAIAYGLISTP RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR
Sbjct: 491 EQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 550
Query: 609 FHHFKDGKCSCGDYW 623
FHHFKDGKCSCGDYW
Sbjct: 551 FHHFKDGKCSCGDYW 565
>gi|356500039|ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 591
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 310/454 (68%), Positives = 358/454 (78%), Gaps = 19/454 (4%)
Query: 184 YQNPGNQN--FQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPA 241
+Q P +QN F+ P +PN+WNNQ P A N + S G NQ N N +N A
Sbjct: 143 FQTPTSQNPNFRPPTTPNRWNNQN----PAAPNQWNPRSQGFPNSNQFQNPNNQLNNNQA 198
Query: 242 GDQV------------LPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGN 289
Q LPPS+ DL RLC+EGKVKEAIELMDKGVKADA CF LF+LCG
Sbjct: 199 SIQAQTHPAPPPPPHPLPPSITDLTRLCKEGKVKEAIELMDKGVKADAGCFDLLFDLCGQ 258
Query: 290 PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLM 349
K E+AKK HD+FLQST R DL LNNKVIEMYG C SMTDARRVFDHM +R M SWHLM
Sbjct: 259 SKSLEDAKKAHDHFLQSTFRSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMGSWHLM 318
Query: 350 INGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFG 409
+ GYA N GD+ LQLFEQM +LGL+ +T LAV SAC SA+ +E+AF+HFESMKS++G
Sbjct: 319 LRGYAYNTNGDDALQLFEQMNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKSKYG 378
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHA 469
I PG EHY+GL+ VLG+ +L EA++FI+Q LPFEPT WE L++YAR+HGD+DLED+
Sbjct: 379 IEPGVEHYMGLLDVLGQSAYLKEAEEFIDQ-LPFEPTVAVWEKLKHYARVHGDVDLEDYT 437
Query: 470 EELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE 529
EEL+V LDPSKA KIPTPPPKK TAI++LDG++R++E++NPTLY+DDEKLKAL+ MKE
Sbjct: 438 EELIVSLDPSKAVANKIPTPPPKKYTAINMLDGRNRIIEYKNPTLYKDDEKLKALSGMKE 497
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP RTPLRIIKNLRVCGDCHNA
Sbjct: 498 TGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNA 557
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 558 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 591
>gi|356521500|ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 588
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 305/462 (66%), Positives = 356/462 (77%), Gaps = 7/462 (1%)
Query: 168 NQGQVYPHQQQPHSNQYQNPGNQN--FQQPRSPNQWNNQQ----NQGYPQARNSYQQVSP 221
N Q P P + +Q P +QN F+ P +PN+WNNQ NQ P+++
Sbjct: 128 NHNQWNPQPTPPQNLNFQTPTSQNPNFRIPTTPNRWNNQNLATPNQWNPRSQGFPNPNQF 187
Query: 222 GHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFY 281
+ NN + +Q PPS+ DL RLC+EGKVKEAIELMDKGVKADA CF
Sbjct: 188 QNPNNQLNNNQTSVQSQASPAPPPQPPSITDLTRLCREGKVKEAIELMDKGVKADAGCFA 247
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
LF+ CG K E+AKK HD+FLQST R DL LNNKVIEMYG C SMTDARRVFDHM +R
Sbjct: 248 LLFDSCGQSKSLEDAKKAHDHFLQSTFRSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNR 307
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
MDSWHLM+ GYA+N GDE LQLFEQM +LGL+ +T LAV SAC SA+ +E+AF+HF
Sbjct: 308 DMDSWHLMMRGYANNTNGDEALQLFEQMNELGLEITSETLLAVLSACASAEDVEDAFLHF 367
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
ESMKS++GI P HY+GL+ VLG+ +L EA++FI+Q LPFEPT WE L++YAR HG
Sbjct: 368 ESMKSKYGIEPVVGHYMGLLDVLGQSAYLKEAEEFIDQ-LPFEPTVAVWEKLKHYARAHG 426
Query: 462 DIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKL 521
D DLED+ EEL+V LDPSKA KIP PPPKK TAI++LDG++R++E++NPTLY+DDEKL
Sbjct: 427 DFDLEDYTEELIVSLDPSKAVANKIPMPPPKKYTAINMLDGRNRIIEYKNPTLYKDDEKL 486
Query: 522 KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
KAL+ MKE+ YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP RTPLRIIKNLR
Sbjct: 487 KALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLR 546
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 547 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 588
>gi|18397896|ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15690
gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|20197709|gb|AAD17413.2| Expressed protein [Arabidopsis thaliana]
gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|330251336|gb|AEC06430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 579
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/631 (51%), Positives = 396/631 (62%), Gaps = 60/631 (9%)
Query: 1 MASLMAIRCLRSRRHSSLTKVRFTSLQYSYLNHPQNNIIGKTLTLSLAKTLSTSAV--EY 58
M+SLMAIRC R++ + +T L+ S+ TL K LSTSA +Y
Sbjct: 1 MSSLMAIRCARTQ--NIVTIGSLLQLRSSFPRLSSQFHFSGTLNSIPIKHLSTSAAANDY 58
Query: 59 NTPPPQPPQS--PLSDSRAFPDQSNFNNNQWASQQEQNNHLSYPNQGHGYATNQYSSDRN 116
+ Q PQS P R +P QS + SQ + N + P + ++T
Sbjct: 59 H----QNPQSGSPSQHQRPYPPQS------FDSQNQTNTNQRVPQSPNQWSTQHGGQIPQ 108
Query: 117 YPNRGYPNQGQRLPIQGQAYPQQHQPGNHQYQNPSNNQEYQRSNYQGQRSPNQGQVYPHQ 176
Y + + GQR P GQ Q Q + NP + R Y GQR
Sbjct: 109 YGGQNPQHGGQRPPYGGQNPQQGGQMSQYGGHNPQHGG--HRPQYGGQRP---------- 156
Query: 177 QQPHSNQYQNPGNQNFQQPRSPNQ----WNNQQNQGYPQARNSYQQVSPGHQIPNQLNNV 232
QY PGN Q + + QQ Q R+S +Q PNQ+N V
Sbjct: 157 ------QYGGPGNNYQNQNVQQSNQSQYYTPQQQQQPQPPRSS-------NQSPNQMNEV 203
Query: 233 PNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKW 292
PPSV ++ RLCQ K+AIEL+DKG D CF LFE C N K
Sbjct: 204 ------------APPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKS 251
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
E++KKVHD+FLQS RGD LNN VI M+G+C S+TDA+RVFDHM D+ MDSWHLM+
Sbjct: 252 LEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCA 311
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
Y+DNG+GD+ L LFE+M K GL+PNE+TFL VF AC + IEEAF+HF+SMK+E GISP
Sbjct: 312 YSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISP 371
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
TEHYLG++GVLGKCGHL EA+Q+I + LPFEPTA+FWEA+RNYAR+HGDIDLED+ EEL
Sbjct: 372 KTEHYLGVLGVLGKCGHLVEAEQYI-RDLPFEPTADFWEAMRNYARLHGDIDLEDYMEEL 430
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTY 532
MVD+DPSKA KIPTPPPK +++ KSR++EFRN T Y+D+ K A K Y
Sbjct: 431 MVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK--KGVVY 488
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
VPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I TP R L IIKNLRVCGDCHN IKI
Sbjct: 489 VPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKI 548
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
MS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 549 MSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>gi|297836184|ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
gi|297331814|gb|EFH62233.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
Length = 548
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/624 (50%), Positives = 388/624 (62%), Gaps = 77/624 (12%)
Query: 1 MASLMAIRCLRSRRHSSLTKVRFTSLQYSYLNHPQNNIIGKTLTLSLAKTLSTSAVEYNT 60
M+SLMAIRC R+++ ++ + + L+ ++ + TL K LSTSA +
Sbjct: 1 MSSLMAIRCARTQKIVTIGSLLHLRSSFPRLSSQFHSSV--TLNSIPIKNLSTSAATNDY 58
Query: 61 PPPQPPQSPLSDSRAFPDQSNFNNNQWASQQEQNNHLSYPNQGHGYATNQYSSDRNYPNR 120
SP R +P QS F++ + +Q+ N PN+
Sbjct: 59 YQNPQSGSPSQQQRPYPPQS-FDSQSYQNQRVPQN----------------------PNQ 95
Query: 121 GYPNQGQRLPIQGQAYPQQHQPGNHQYQNPSNNQEYQRSNYQGQRSPNQGQVYPHQQQPH 180
P G + P G H+P QY QR Y GQR
Sbjct: 96 WTPQHGGQNPQHGG-----HRP---QYGG-------QRPQYGGQRP-------------- 126
Query: 181 SNQYQNPGNQNFQQPRSPNQWNNQQNQGYPQARNSYQQVS-PGHQIPNQLNNVPNNMNQC 239
QY GN Q + Q+Q Y + QQ +QI NQ+N
Sbjct: 127 --QYGGAGNNYQNQNVQ----QSHQSQYYTPQQQQQQQPPRSSNQISNQMN--------- 171
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKV 299
+V PPSV ++ LCQ K+AIEL+DKG D CF LFE C N K E++KKV
Sbjct: 172 ----EVAPPSVEEVMSLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKV 227
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
HD+FLQS RGD LNN VI M+G+C S+TDA+RVFDHM D+ MDSWHLM+ Y+DNG+G
Sbjct: 228 HDHFLQSKFRGDPKLNNMVISMFGECRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMG 287
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG 419
D+ L LFE+M K GL+PNE+TFL VF AC + I+EAF+HF+SM++E GISP TEHYLG
Sbjct: 288 DDALHLFEEMTKQGLKPNEETFLTVFLACATVGGIKEAFLHFDSMRNEHGISPKTEHYLG 347
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS 479
++GVLGKCGHL EA+Q+I + LPFEPTA+FWEA+RNYAR+HGDIDLED+ EELMVDLD S
Sbjct: 348 VLGVLGKCGHLIEAEQYI-RDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDLDSS 406
Query: 480 KADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYV 539
KA KIPTP PK +++ KSR++EFRN T Y+D+ K A K YVPDTR+V
Sbjct: 407 KAVTNKIPTPQPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK--KGVVYVPDTRFV 464
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHDIDQEAKEQALLYHSERLAIAYG+I TP R L IIKNLRVCGDCHN IKIMS+I+GR
Sbjct: 465 LHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGR 524
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
ELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 525 ELIVRDNKRFHHFKDGKCSCGDYW 548
>gi|224070865|ref|XP_002303271.1| predicted protein [Populus trichocarpa]
gi|222840703|gb|EEE78250.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/331 (77%), Positives = 286/331 (86%), Gaps = 1/331 (0%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+E+AKKVHDYFLQST RGD+ LNN VI+MYGKCGSM DARRVFDHM +R+MDSWHLMIN
Sbjct: 5 HEDAKKVHDYFLQSTFRGDVKLNNNVIKMYGKCGSMADARRVFDHMPERNMDSWHLMINE 64
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
YA+N LGDEGL+LFEQM+KLGL+P +TF AV SAC SA+A+EE F++FE M EFGISP
Sbjct: 65 YANNDLGDEGLELFEQMKKLGLEPTGETFHAVLSACASAEAVEEGFLYFEEMSREFGISP 124
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
EHYL ++ VLGK +L EA ++IE KLPFEPT E WEALR YAR HGDIDLEDHAEEL
Sbjct: 125 TLEHYLSIIDVLGKSAYLNEAVEYIE-KLPFEPTVEIWEALRKYARSHGDIDLEDHAEEL 183
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTY 532
+V LD SKA KIPTPPPKK IS+L+GK+R+ EFRNPT Y+DDEKLK L +MK Y
Sbjct: 184 IVSLDSSKAVANKIPTPPPKKYNLISMLEGKNRVAEFRNPTFYKDDEKLKELREMKTGGY 243
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPAR PLRIIKNLRVCGDCHNAIKI
Sbjct: 244 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARMPLRIIKNLRVCGDCHNAIKI 303
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
MS+IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 304 MSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 334
>gi|225444971|ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Vitis vinifera]
Length = 476
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/436 (61%), Positives = 326/436 (74%), Gaps = 16/436 (3%)
Query: 191 NFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSV 250
N Q P + Q N +P +++ Q ++ G Q+ NN N + + S
Sbjct: 54 NHQPTNKPRVFRRQTNSTHPPKQHNGQNLT-GTQL--------NNANYPQTENFTVVHSG 104
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
DL LC+EGK++EA+E M +GV A+ F + CG K E ++VHD +S G
Sbjct: 105 VDLMGLCEEGKIREAVEYMGQGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGG 164
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ LNNK+IEMYG+CGSM DARRVFD M +R+M SWHLMINGYA NG G +GL LFE+MR
Sbjct: 165 DVELNNKLIEMYGRCGSMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFERMR 224
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
K+GL+P +TF+AV SACGS +EE ++FE MK E GI PG EHYLG++ VLGK GH+
Sbjct: 225 KVGLRPVGETFVAVLSACGS---VEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFGHI 281
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EA++F++ K+P EPTAE WEALRN+ARIHG I+LED AEE++ LDPSKA KIPTPP
Sbjct: 282 NEAEEFVD-KMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIPTPP 340
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDD--EKLKALN-QMKESTYVPDTRYVLHDIDQEA 547
KK+ A+++L+GK+R+ E+R+ Y+ D EKLK LN QM+E+ YVPDTRYVLHDIDQEA
Sbjct: 341 QKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDIDQEA 400
Query: 548 KEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNK 607
KEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNK
Sbjct: 401 KEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 460
Query: 608 RFHHFKDGKCSCGDYW 623
RFHHFKDGKCSCGDYW
Sbjct: 461 RFHHFKDGKCSCGDYW 476
>gi|147835805|emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
Length = 497
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/475 (58%), Positives = 339/475 (71%), Gaps = 25/475 (5%)
Query: 159 SNYQGQRSPNQGQVYPHQQQPHSNQYQNP--------GNQNFQQPRSPNQWNNQQNQGYP 210
SN++ R P P +P S+ QNP N Q P + Q N +P
Sbjct: 17 SNFKA-RIPAHSSALP--LKPISSSPQNPPLKLLCTYALPNHQPTNKPRVFRRQTNSTHP 73
Query: 211 QARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMD 270
+++ Q ++ G Q+ Q N P N + S DL LC+EGK++EA+E M
Sbjct: 74 PKQHNGQNLT-GTQLNTQNANYPQTENF------TVVHSGVDLMGLCEEGKIREAVEYMG 126
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV A+ F + CG K E ++VHD +S GD+ LNNK+IEMYG+CGSM D
Sbjct: 127 QGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIEMYGRCGSMRD 186
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
ARRVFD M +R+M SWHLMINGYA NG G +GL LFE+MRK+GL+P +TF+AV SACGS
Sbjct: 187 ARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFERMRKVGLRPVGETFVAVLSACGS 246
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+EE ++FE MK E GI PG EHYLG++ VLGK GH+ EA++F++ K+P EPTAE W
Sbjct: 247 ---VEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFGHINEAEEFVD-KMPIEPTAEVW 302
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFR 510
EALRN+ARIHG I+LED AEE++ LDPSKA KIPTPP KK+ A+++L+GK+R+ E+R
Sbjct: 303 EALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIPTPPQKKQLAVNMLEGKNRVSEYR 362
Query: 511 NPTLYRDD--EKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+ Y+ D EKLK LN QM+E+ YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS
Sbjct: 363 STNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 422
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
TPARTPLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNKRFHHFKDGKCSCGDY
Sbjct: 423 TPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDY 477
>gi|293334013|ref|NP_001167864.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
gi|223944527|gb|ACN26347.1| unknown [Zea mays]
gi|413946729|gb|AFW79378.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 578
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/373 (65%), Positives = 301/373 (80%), Gaps = 9/373 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+L LC+EG+VK+A+EL+DKG AD + FY L C NPK E +KVHD+FL+S RG
Sbjct: 215 GELMGLCREGRVKDAVELLDKGACADPAAFYELAAACSNPKLLEELRKVHDFFLRSPFRG 274
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL +NNK+++MY KC +M ARR FD+M DR MDSWH++I+GY+ NGLGDE L+LFE M+
Sbjct: 275 DLRVNNKLLKMYAKCAAMPHARRTFDNMPDRDMDSWHIVIDGYSVNGLGDEALRLFELMK 334
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ + P T+L V +AC +++AIEEA ++F++M + GI PG EHY+G++ VLGK GHL
Sbjct: 335 EC-MSPTSHTYLLVLNACANSEAIEEALLYFDAMHRDHGIEPGVEHYVGIIEVLGKSGHL 393
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EA +FIE KLPFEP A WE+L N AR++GDIDLED AEEL+V LDPSK++ KK+PTPP
Sbjct: 394 NEALEFIE-KLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKSNHKKLPTPP 452
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQ 550
PK+R I++LDG+++LVE+R P + ++K+ + E YVPDTRYVLHDIDQEAKEQ
Sbjct: 453 PKRRLGINMLDGRNKLVEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKEQ 505
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
ALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFH
Sbjct: 506 ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFH 565
Query: 611 HFKDGKCSCGDYW 623
HFKDGKCSCGDYW
Sbjct: 566 HFKDGKCSCGDYW 578
>gi|242056975|ref|XP_002457633.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
gi|241929608|gb|EES02753.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
Length = 396
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/373 (65%), Positives = 299/373 (80%), Gaps = 9/373 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+L LC+EG+VK+A+EL+ KG +AD FY L C NPK E +KVHD+FL+S RG
Sbjct: 33 GELIGLCREGRVKDAVELLAKGARADPPAFYELAAACSNPKLIEELRKVHDFFLRSPFRG 92
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL +NNK++EMY KCG+M ARR FD+M DR MDSWH+M++GY+ NGLGDE L++FE M+
Sbjct: 93 DLRVNNKLLEMYTKCGAMPHARRTFDNMPDRDMDSWHIMMDGYSMNGLGDEALRMFELMK 152
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ L P T++ V +AC +++AIEEAF++F++M + GI PG EHY+G++ VLGK GHL
Sbjct: 153 EC-LAPTSHTYVLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHL 211
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EA ++IE KLPFEP A WE++ N AR++GDIDLED AEEL+V LDPSKA+PKK+ T P
Sbjct: 212 NEALEYIE-KLPFEPNAMVWESVLNLARMNGDIDLEDRAEELLVSLDPSKANPKKLSTLP 270
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQ 550
PK+R I++LDG++RLVE+R P + K +N E YVPDTRYVLHDIDQEAKEQ
Sbjct: 271 PKRRMGINMLDGRNRLVEYRLPPKI----ERKVVN---EQRYVPDTRYVLHDIDQEAKEQ 323
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
ALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFH
Sbjct: 324 ALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFH 383
Query: 611 HFKDGKCSCGDYW 623
HFKDGKCSCGDYW
Sbjct: 384 HFKDGKCSCGDYW 396
>gi|326515404|dbj|BAK03615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/371 (66%), Positives = 300/371 (80%), Gaps = 8/371 (2%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
L LC+EG+ KEA+EL++KG +ADA+ FY L C PK E +KVHDY L+S R DL
Sbjct: 176 LIALCREGRAKEAVELLEKGARADAASFYELAGACSTPKLLEELRKVHDYLLRSPFRADL 235
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+NN+ +EMYG+CG+MT ARR FDHM DR M SWHLMI GYA NGLGD GLQLFE+M++
Sbjct: 236 QVNNRFLEMYGRCGNMTHARRTFDHMPDRDMASWHLMIEGYAANGLGDAGLQLFEEMKRC 295
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+ P +TF+ V AC +++AIEEAF++F++M + GI PG EHY+G++ VLGK GHL E
Sbjct: 296 GMAPTARTFVLVLDACANSEAIEEAFLYFDAMSRDHGIEPGMEHYVGIIEVLGKSGHLNE 355
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
A +++E KLPFEP A WE++ N AR++GDIDLED EEL+V LDPSKA+PKK+PTPPPK
Sbjct: 356 AVEYVE-KLPFEPNAMIWESVLNLARMNGDIDLEDRVEELLVSLDPSKANPKKLPTPPPK 414
Query: 493 KRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+R I++LDG+++L E+R P + ++K+ + E YVPDTRYVLHDIDQEAKEQAL
Sbjct: 415 RRLGINMLDGRNKLGEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKEQAL 467
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
LYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHHF
Sbjct: 468 LYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHF 527
Query: 613 KDGKCSCGDYW 623
K+GKCSCGDYW
Sbjct: 528 KEGKCSCGDYW 538
>gi|125547430|gb|EAY93252.1| hypothetical protein OsI_15058 [Oryza sativa Indica Group]
Length = 407
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/374 (66%), Positives = 301/374 (80%), Gaps = 9/374 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+L L +EG+VKEA+E +DKG +AD FY L C NPK E +K+HD+FL+S R
Sbjct: 42 GELIGLGREGRVKEAVEKLDKGARADPQAFYELAAACSNPKLLEELRKIHDFFLRSPFRA 101
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL +NNK++EMY KC +M ARR FDHM DR+MDSWH+MI+GYA NGLGD LQLFE+M+
Sbjct: 102 DLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMK 161
Query: 371 -KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
K G+ P TF V +AC +++AIEEAF++F++M + GI PG EHY+G++ VLGK GH
Sbjct: 162 TKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGH 221
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP 489
L EA ++IE KLPFEPTA WE+L N AR++GDIDLED AEEL+V LDP+K +PKK+PTP
Sbjct: 222 LNEAVEYIE-KLPFEPTATVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTP 280
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKE 549
PPK+R I++LDG+++LVE+R P + ++K+ + E YVPDTRYVLHDIDQEAKE
Sbjct: 281 PPKRRLGINMLDGRNKLVEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKE 333
Query: 550 QALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF 609
QALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRF
Sbjct: 334 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 393
Query: 610 HHFKDGKCSCGDYW 623
HHFKDGKCSCGDYW
Sbjct: 394 HHFKDGKCSCGDYW 407
>gi|125589603|gb|EAZ29953.1| hypothetical protein OsJ_14007 [Oryza sativa Japonica Group]
Length = 504
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/374 (65%), Positives = 300/374 (80%), Gaps = 9/374 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+L L +EG+VKEA+E +DKG +AD FY L C NPK E +K+HD+FL+S R
Sbjct: 139 GELIGLGREGRVKEAVEKLDKGARADPQAFYELAAACSNPKLLEELRKIHDFFLRSPFRA 198
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL +NNK++EMY KC +M ARR FDHM DR+MDSWH+MI+GYA NGLGD LQLFE+M+
Sbjct: 199 DLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMK 258
Query: 371 -KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
K G+ P TF V +AC +++AIEEAF++F++M + GI PG EHY+G++ VLGK GH
Sbjct: 259 TKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGH 318
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP 489
L EA ++IE KLPFEPT WE+L N AR++GDIDLED AEEL+V LDP+K +PKK+PTP
Sbjct: 319 LNEAVEYIE-KLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTP 377
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKE 549
PPK+R I++LDG+++LVE+R P + ++K+ + E YVPDTRYVLHDIDQEAKE
Sbjct: 378 PPKRRLGINMLDGRNKLVEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKE 430
Query: 550 QALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF 609
QALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRF
Sbjct: 431 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 490
Query: 610 HHFKDGKCSCGDYW 623
HHFKDGKCSCGDYW
Sbjct: 491 HHFKDGKCSCGDYW 504
>gi|259490048|ref|NP_001159270.1| uncharacterized protein LOC100304360 [Zea mays]
gi|223943115|gb|ACN25641.1| unknown [Zea mays]
gi|413948667|gb|AFW81316.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 580
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/372 (65%), Positives = 299/372 (80%), Gaps = 9/372 (2%)
Query: 252 DLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
+L LC+EG+VK+A+EL+ KG + D FY L C NPK E +KVHD+FL+S RGD
Sbjct: 218 ELMGLCREGRVKDAVELLSKGARTDLDTFYELAATCSNPKLLEELRKVHDFFLRSPFRGD 277
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L +NN ++ MY KC +M ARR FD+M DR MDSWH+MI+GY+ NGLGDE L+LFE M++
Sbjct: 278 LRVNNMLLAMYAKCAAMPHARRTFDNMPDRDMDSWHIMIDGYSVNGLGDEALRLFELMKE 337
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
+ P QT+L V +AC +++AIEEA ++F++M + GI PG EHY+G++ VLGK GHL
Sbjct: 338 C-MAPTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLN 396
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
EA +FIE KLPFEP A WE+L N AR++GDIDLED AEEL+V LDPSKA+PKK+PTPPP
Sbjct: 397 EALEFIE-KLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKANPKKLPTPPP 455
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQA 551
K+R I++LDG+++LVE+R P + ++K+ + E YVPDTRYVLHDIDQEAKEQA
Sbjct: 456 KRRLGINMLDGRNKLVEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKEQA 508
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
LLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHH
Sbjct: 509 LLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHH 568
Query: 612 FKDGKCSCGDYW 623
FKDGKCSCGDYW
Sbjct: 569 FKDGKCSCGDYW 580
>gi|242089073|ref|XP_002440369.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
gi|241945654|gb|EES18799.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
Length = 642
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/372 (65%), Positives = 300/372 (80%), Gaps = 9/372 (2%)
Query: 252 DLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
+L LC+EG+VK+A+EL+ KG AD FY L C NPK E +KVHD+FL+S R D
Sbjct: 280 ELMGLCREGRVKDAVELLAKGAHADPPAFYELAAACSNPKLLEELRKVHDFFLRSPFRSD 339
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L +NNK++EMY KC +M ARR FD+M DR MDSWH+MI+GY+ NGLGDE L+LFE M++
Sbjct: 340 LRVNNKLLEMYAKCAAMPHARRTFDNMPDRDMDSWHIMIDGYSVNGLGDEALRLFELMKE 399
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
+ P QT+L V +AC +++AIEEA ++F++M + GI PG EHY+G++ VLGK GHL
Sbjct: 400 C-MAPTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLN 458
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
EA +FIE KLPFEP A WE+L N A+++GDIDLED AEEL+V LDPSKA+PKK+PTPPP
Sbjct: 459 EALEFIE-KLPFEPNAMVWESLLNLAQMNGDIDLEDRAEELLVSLDPSKANPKKLPTPPP 517
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQA 551
K+R I++LDG+++LVE+R P + ++K+ + E YVPDTRYVLHDIDQEAKEQA
Sbjct: 518 KRRLGINMLDGRNKLVEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKEQA 570
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
LLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHH
Sbjct: 571 LLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHH 630
Query: 612 FKDGKCSCGDYW 623
FKDGKCSCGDYW
Sbjct: 631 FKDGKCSCGDYW 642
>gi|449446817|ref|XP_004141167.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/380 (60%), Positives = 285/380 (75%), Gaps = 5/380 (1%)
Query: 248 PSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
PS DL LC+EGKV + +E + +G K D F L C N K E ++V +
Sbjct: 80 PSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTK 139
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
RGDL LNN++IEMY CG M DAR+VFD MA++ SW+LMI GY DNG GD GL LFE
Sbjct: 140 FRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNLMIKGYGDNGEGDNGLALFE 199
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM+ GLQPN +TFL V +AC A+A++E +F+ M +E+GI+P EHYLG+V VLGK
Sbjct: 200 QMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKS 259
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
GHL EA++FIE K+P PTA+ W+ALRNYAR+HG+++LED AEELM LDPS P
Sbjct: 260 GHLIEAEEFIE-KMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKP 318
Query: 488 T-PPPKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALN-QMKESTYVPDTRYVLHDI 543
+ PP +K+++ ++L+ K R+ EFR Y++ + +LK LN QM+E+ YVPDTRYVLHDI
Sbjct: 319 SLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDI 378
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D+EAK+QAL YHSERLAIAYGLISTPART LRIIKNLR+CGDCHNAIKIMS+IVGRELIV
Sbjct: 379 DEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIV 438
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RDNKRFHHFKDGKCSCGDYW
Sbjct: 439 RDNKRFHHFKDGKCSCGDYW 458
>gi|449488164|ref|XP_004157956.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/380 (60%), Positives = 286/380 (75%), Gaps = 5/380 (1%)
Query: 248 PSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
PS DL LC+EGKV +A+E + +G K D F L C N K E ++V +
Sbjct: 80 PSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTK 139
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
RGDL LNN++IEMY CG M DAR+VFD MA++ SW+LMI G DNG GD GL LFE
Sbjct: 140 FRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNLMIKGCGDNGEGDNGLALFE 199
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM+ +GLQPN +TFL V +AC A+A++E +F+ M +E+GI+P EHYLG+V VLGK
Sbjct: 200 QMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKS 259
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
GHL EA++FIE K+P PTA+ W+ALRNYAR+HG+++LED AEELM LDPS P
Sbjct: 260 GHLIEAEEFIE-KMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKP 318
Query: 488 T-PPPKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALN-QMKESTYVPDTRYVLHDI 543
+ PP +K+++ ++L+ K R+ EFR Y++ + +LK LN QM+E+ YVPDTRYVLHDI
Sbjct: 319 SLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDI 378
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D+EAK+QAL YHSERLAIAYGLISTPART LRIIKNLR+CGDCHNAIKIMS+IVGRELIV
Sbjct: 379 DEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIV 438
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RDNKRFHHFKDGKCSCGDYW
Sbjct: 439 RDNKRFHHFKDGKCSCGDYW 458
>gi|388511541|gb|AFK43832.1| unknown [Lotus japonicus]
Length = 295
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/296 (75%), Positives = 263/296 (88%), Gaps = 1/296 (0%)
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M DARRVFDHM+ ++++SWHLM+ GYA++ +GD+ L+LFEQM +LGL+ +T LAV SA
Sbjct: 1 MIDARRVFDHMSSKNVESWHLMLRGYANSTMGDDALRLFEQMNELGLEITSETLLAVLSA 60
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
CGSA+A+E+AF+HF+SMKS++GI PG EHY+GL+ VLG+ G+L EA++FIE KLPFEPT
Sbjct: 61 CGSAEAVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIE-KLPFEPTL 119
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLV 507
WE L+NYARIHGDIDLEDH EELMV+LDPSKA KIPTPPPKK IS+LDG++R++
Sbjct: 120 TVWETLKNYARIHGDIDLEDHVEELMVNLDPSKAVANKIPTPPPKKYNHISMLDGRNRII 179
Query: 508 EFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
E++NP+LY+DDEKLKAL MK++ YVPDTRYVLHDIDQEAK QALLYHSERLAIAYGLIS
Sbjct: 180 EYKNPSLYKDDEKLKALIGMKDAGYVPDTRYVLHDIDQEAKGQALLYHSERLAIAYGLIS 239
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 240 TPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 295
>gi|255555475|ref|XP_002518774.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542155|gb|EEF43699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 573
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 276/493 (55%), Positives = 330/493 (66%), Gaps = 59/493 (11%)
Query: 76 FPDQSNFNNNQW-----ASQQEQNNHLSYPNQGHGYATNQYSSDRNY-------PNRGYP 123
+PD N N+NQW +Q N + P+Q H N ++ NY P+RGYP
Sbjct: 69 YPDDRNPNHNQWNQGGSPNQVNPNQWNAQPHQQHSQHINPNNNQFNYQSSNQTNPSRGYP 128
Query: 124 NQGQRLPI----------QGQAYPQ-----QHQPGNHQYQNPSNNQEYQRSNYQGQRSPN 168
N + QGQ + Q Q P +++ +PS Q + + Q++PN
Sbjct: 129 NPFPQQQPQQNHHNQWNSQGQNFSQYQNQSQMNPNANKWSSPS--QNFPNHQNRPQQNPN 186
Query: 169 QGQVYPHQQQPHSNQYQ-NPGNQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPN 227
Q P H N Q +P Q +QQP + +QWNNQ NQGYPQARN PG P
Sbjct: 187 QWNSPPQNFPQHQNPSQVHPNVQGYQQPGNASQWNNQ-NQGYPQARN------PGQWAPQ 239
Query: 228 QLNNVPNNMNQCPAGDQV----------LP---PSVADLARLCQEGKVKEAIELMDKGVK 274
VPN NQ + LP P+ ADL RL QEGKVKEAIELMDKGVK
Sbjct: 240 ----VPN-FNQGHGASETQSPNVNVEANLPAPAPTAADLMRLFQEGKVKEAIELMDKGVK 294
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
ADA CFY LFELCG E+AKKVHDYFLQST RGD+ LN KVIEMYGKCGSMTDARRV
Sbjct: 295 ADADCFYALFELCGK---IEDAKKVHDYFLQSTCRGDVRLNKKVIEMYGKCGSMTDARRV 351
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
FDHM DR +D WHLMINGYA N LGDEGLQLFEQMR+ GL+P +TFLAV SAC SA+A+
Sbjct: 352 FDHMKDRDIDLWHLMINGYASNNLGDEGLQLFEQMRQSGLKPTAETFLAVLSACASAEAV 411
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
EE F+HFESMK+E+G +PGTEHYLG++ VLGK G++ E Q++I QKLPFEPT + W ALR
Sbjct: 412 EEGFLHFESMKNEYGFNPGTEHYLGVIDVLGKSGYINEIQEYI-QKLPFEPTVDVWGALR 470
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTL 514
NYARIHGD+DLED AEELMV LDPSKA KIPTPPPKK + IS+L+GK+R+VEFRNPTL
Sbjct: 471 NYARIHGDVDLEDRAEELMVALDPSKAVANKIPTPPPKKYSLISMLEGKNRIVEFRNPTL 530
Query: 515 YRDDEKLKALNQM 527
Y+DDEKLKA++++
Sbjct: 531 YKDDEKLKAMSKV 543
>gi|356497955|ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 452
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/417 (56%), Positives = 304/417 (72%), Gaps = 8/417 (1%)
Query: 213 RNSYQQVSPGHQIPNQLN-NVPNNMN-QCPAGDQVLP-PSVADLARLCQEGKVKEAIELM 269
RN H+IP N+PN Q +Q P P DL LC+EG + + +ELM
Sbjct: 38 RNGTNNSRSTHKIPPLCKGNLPNEQKLQLDHQNQNAPLPLNVDLVSLCEEGNLDQVLELM 97
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+G AD + L LC + + E+ K+VH++ +ST R D+ L+N++I MY KCGS+
Sbjct: 98 GQGAVADYRVYLALLNLCEHTRSLESGKRVHEFLRRSTFRRDVELSNRLIGMYCKCGSVK 157
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
DARRVFD + +R++ SWHLMI GYA NGLG +GL +F+QM++ G+ P+ +TF V +AC
Sbjct: 158 DARRVFDQIPERNISSWHLMIGGYAANGLGCDGLLVFQQMKQAGVPPDGETFELVLAACA 217
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A+A+EE F+HFESMK E GI P EHYL ++ +LG G L EA++FIE K+P E E
Sbjct: 218 QAEAVEEGFLHFESMK-EHGIVPSMEHYLEVINILGNTGQLNEAEEFIE-KIPIELGVEA 275
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEF 509
WE+LRN+A+ HGD+DLEDHAEE++ LDPSKA K+P PP KK++ +++L+ K+R+ E+
Sbjct: 276 WESLRNFAQKHGDLDLEDHAEEVLTCLDPSKAVADKLPPPPRKKQSDMNMLEEKNRVTEY 335
Query: 510 RNPTLYRDD--EKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
R Y+++ EKL L+ QM+E+ YVPDTRYVLHDID+E KE+AL YHSERLAIAYGLI
Sbjct: 336 RYSIPYKEEAHEKLGGLSGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLI 395
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
STP RT LRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 396 STPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 452
>gi|358248494|ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/379 (59%), Positives = 285/379 (75%), Gaps = 5/379 (1%)
Query: 248 PSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
P DL LC+EG + + +ELM +G AD + L LC + + E+ K+VH+ +S
Sbjct: 73 PLNVDLVALCEEGNLDQVLELMGQGAVADYRVYLALLNLCEHTRSLESGKRVHEILRRSA 132
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
RGD+ L+N++I MY KCGS+ +ARRVFD M DR+M +WHLMI GY NGLG +GL +F+
Sbjct: 133 FRGDVELSNRLIGMYCKCGSVKNARRVFDQMLDRNMATWHLMIGGYTSNGLGCDGLLVFQ 192
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM++ L P+ +TF V +AC A+A+EE F+HFESMK E+GI P EHYL ++ ++G
Sbjct: 193 QMKQAELPPDGETFELVLAACSQAEAVEEGFLHFESMK-EYGIVPSMEHYLEVINIMGNA 251
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
G L EA++FIE +P E E WE+LR +ARIHGD+DLED AEEL+ DPSKA K+P
Sbjct: 252 GQLKEAEEFIEN-VPIELGVEAWESLRKFARIHGDLDLEDCAEELLTRFDPSKAIADKLP 310
Query: 488 TPPPKKRTAISILDGKSRLVEFRNPTLYR--DDEKLKALN-QMKESTYVPDTRYVLHDID 544
TPP KK++ +++L+ K+R E+R Y+ D+EKL L+ QM+E+ YVPDTRYVLHDID
Sbjct: 311 TPPRKKQSDVNMLEEKNRATEYRYSIPYKEEDNEKLGGLSGQMREAGYVPDTRYVLHDID 370
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+E KE+AL YHSERLAIAYGLISTP RT LRIIKNLR+CGDCHNAIKIMS+IVGRELIVR
Sbjct: 371 EEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 430
Query: 605 DNKRFHHFKDGKCSCGDYW 623
DNKRFHHFKDGKCSCGDYW
Sbjct: 431 DNKRFHHFKDGKCSCGDYW 449
>gi|38347147|emb|CAD39490.2| OSJNBa0039G19.7 [Oryza sativa Japonica Group]
Length = 557
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 277/339 (81%), Gaps = 9/339 (2%)
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
L NPK E +K+HD+FL+S R DL +NNK++EMY KC +M ARR FDHM DR+MDS
Sbjct: 227 LAPNPKLLEELRKIHDFFLRSPFRADLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDS 286
Query: 346 WHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
WH+MI+GYA NGLGD LQLFE+M+ K G+ P TF V +AC +++AIEEAF++F++M
Sbjct: 287 WHIMIDGYAVNGLGDVALQLFEEMKTKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAM 346
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+ GI PG EHY+G++ VLGK GHL EA ++IE KLPFEPT WE+L N AR++GDID
Sbjct: 347 SRDHGIEPGVEHYVGIIEVLGKSGHLNEAVEYIE-KLPFEPTDTVWESLLNLARMNGDID 405
Query: 465 LEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL 524
LED AEEL+V LDP+K +PKK+PTPPPK+R I++LDG+++LVE+R P + ++K+
Sbjct: 406 LEDRAEELLVSLDPTKVNPKKLPTPPPKRRLGINMLDGRNKLVEYRLPP--KIEKKV--- 460
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ E YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CG
Sbjct: 461 --VNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICG 518
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 519 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 557
>gi|357501199|ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 446
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/376 (58%), Positives = 278/376 (73%), Gaps = 5/376 (1%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ A QEG V + +ELM +G AD S F +L +LC + K E K+VH++ +S G
Sbjct: 73 VNFAHFLQEGNVNQVLELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGG 132
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ L N++I +Y KCGS+ DAR+VFD M DR++ S +LMI GY NGLG +GL +F+QMR
Sbjct: 133 NVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMR 192
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G+ P+E+TF V + C D +EE + FESMK E+GI PG EHYLG+V + G G L
Sbjct: 193 QQGVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNIFGCAGRL 251
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EA +FIE +P E E WE LRN+ARIHGD++ ED A+EL+ LDPSKA K+P P
Sbjct: 252 DEAHEFIEN-MPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPSKAAADKVPLPQ 310
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALN-QMKESTYVPDTRYVLHDIDQEA 547
KK++AI++L+ K+R+ E+R Y++ D KL+ L QM+E+ YVPDTRYVLHDID+E
Sbjct: 311 RKKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLHDIDEEE 370
Query: 548 KEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNK 607
KE+AL YHSERLAIAYGLISTP RT LRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNK
Sbjct: 371 KEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 430
Query: 608 RFHHFKDGKCSCGDYW 623
RFHHFKDGKCSCGDYW
Sbjct: 431 RFHHFKDGKCSCGDYW 446
>gi|297602164|ref|NP_001052155.2| Os04g0174800 [Oryza sativa Japonica Group]
gi|255675179|dbj|BAF14069.2| Os04g0174800 [Oryza sativa Japonica Group]
Length = 299
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/307 (69%), Positives = 255/307 (83%), Gaps = 9/307 (2%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQP 376
++EMY KC +M ARR FDHM DR+MDSWH+MI+GYA NGLGD LQLFE+M+ K G+ P
Sbjct: 1 MLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMKTKYGIAP 60
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
TF V +AC +++AIEEAF++F++M + GI PG EHY+G++ VLGK GHL EA ++
Sbjct: 61 TAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNEAVEY 120
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA 496
IE KLPFEPT WE+L N AR++GDIDLED AEEL+V LDP+K +PKK+PTPPPK+R
Sbjct: 121 IE-KLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPPPKRRLG 179
Query: 497 ISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
I++LDG+++LVE+R P + ++K+ + E YVPDTRYVLHDIDQEAKEQALLYHS
Sbjct: 180 INMLDGRNKLVEYRLPP--KIEKKV-----VNEQRYVPDTRYVLHDIDQEAKEQALLYHS 232
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
ERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK
Sbjct: 233 ERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 292
Query: 617 CSCGDYW 623
CSCGDYW
Sbjct: 293 CSCGDYW 299
>gi|357501047|ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/372 (54%), Positives = 264/372 (70%), Gaps = 14/372 (3%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ A QEG V + +ELM +G AD S F +L +LC + K E K+VH++ +S G
Sbjct: 73 VNFAHFLQEGNVNQVLELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGG 132
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ L N++I +Y KCGS+ DAR+VFD M DR++ S +LMI GY NGLG +GL +F+QMR
Sbjct: 133 NVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMR 192
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G+ P+E+TF V + C D +EE + FESMK E+GI PG EHYLG+V + G G L
Sbjct: 193 QQGVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNIFGCAGPL 251
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EAQ+FIE +P E + WE LRN+ARI+GD++ ED A+ L V DPSKA K+P P
Sbjct: 252 DEAQEFIEN-MPIEAGVDVWETLRNFARIYGDLEREDRAKLLTVR-DPSKAAADKMPLPQ 309
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQ 550
KK++AI++L+ K+R+ E+R T Q++E+ YVPDTRYVLHDID+E KE+
Sbjct: 310 RKKQSAINMLEEKNRVSEYRCLT-----------GQIREAGYVPDTRYVLHDIDEEEKEK 358
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
AL YHSERLAIAYGLISTP RT LRIIKNLR+CGDCHNAIK MS+IVG +LIVRDNKRFH
Sbjct: 359 ALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVGMKLIVRDNKRFH 418
Query: 611 HFKDGKCSCGDY 622
HFKDGKC+ Y
Sbjct: 419 HFKDGKCAISMY 430
>gi|357501237|ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/372 (54%), Positives = 263/372 (70%), Gaps = 14/372 (3%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ A QEG V + +ELM +G AD S F +L +LC + K E K+VH++ +S G
Sbjct: 73 VNFAHFLQEGNVNQVLELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGG 132
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ L N++I +Y KCGS+ DAR+VFD M DR++ S +LMI GY NGLG +GL +F+QMR
Sbjct: 133 NVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMR 192
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G+ P+E+TF V + C D +EE + FESMK E+GI PG EHYLG+ + G G L
Sbjct: 193 QQGVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVDNIFGCAGPL 251
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EAQ+FIE +P E + WE LRN+ARI+GD++ ED A+ L V DPSKA K+P P
Sbjct: 252 DEAQEFIEN-MPIEAGVDVWETLRNFARIYGDLEREDRAKLLTVR-DPSKAAADKMPLPQ 309
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQ 550
KK++AI++L+ K+R+ E+R T Q++E+ YVPDTRYVLHDID+E KE+
Sbjct: 310 RKKQSAINMLEEKNRVSEYRCLT-----------GQIREAGYVPDTRYVLHDIDEEEKEK 358
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
AL YHSERLAIAYGLISTP RT LRIIKNLR+CGDCHNAIK MS+IVG +LIVRDNKRFH
Sbjct: 359 ALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVGMKLIVRDNKRFH 418
Query: 611 HFKDGKCSCGDY 622
HFKDGKC+ Y
Sbjct: 419 HFKDGKCAISMY 430
>gi|357501247|ref|XP_003620912.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495927|gb|AES77130.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 415
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/377 (53%), Positives = 255/377 (67%), Gaps = 38/377 (10%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ A QEG V + +ELM +G AD S F +L +LC + K E K+VH++ +S G
Sbjct: 73 VNFAHFLQEGNVNQVLELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGG 132
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ L N++I +Y KCGS+ DAR+VFD M DR++ SW+LMI GY NGLG +GL +F+QMR
Sbjct: 133 NVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQMR 192
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G+ P+E+TF V + C D +EE G EHYLG+V + G G L
Sbjct: 193 QQGIVPDEETFALVLAVCALVDGVEE----------------GMEHYLGVVNIFGCAGRL 236
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK-KIPTP 489
EA +FIE IHGD++ ED A+EL+ +DPSKA K+P P
Sbjct: 237 NEAHEFIENI------------------IHGDLEREDCADELLTVIDPSKAAADDKVPLP 278
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLYR--DDEKLKALN-QMKESTYVPDTRYVLHDIDQE 546
KK++AI++++ K+R+ E+R Y DDEKL+ L QM+E+ YVPDTRYVLHDID+E
Sbjct: 279 QRKKQSAINMMEEKNRVSEYRCNMPYEEEDDEKLRGLTGQMREAGYVPDTRYVLHDIDEE 338
Query: 547 AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
KE+AL YHSE LAIAYGLISTP RT LRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDN
Sbjct: 339 EKEKALQYHSECLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 398
Query: 607 KRFHHFKDGKCSCGDYW 623
KRFHHFKDGKCSCGDYW
Sbjct: 399 KRFHHFKDGKCSCGDYW 415
>gi|225430210|ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
[Vitis vinifera]
Length = 807
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/516 (41%), Positives = 307/516 (59%), Gaps = 47/516 (9%)
Query: 140 HQPGNHQYQNPSNNQEYQRSNYQGQRSPNQGQVYPHQQQPHSNQYQ-NPGNQNFQQPRSP 198
H+ QYQ PS N Y+ + Q Q++PN GQ +QQ P+ QYQ NP +QQ +P
Sbjct: 307 HRENLQQYQ-PSENMYYRENVGQYQQNPNVGQ---YQQNPNIGQYQQNPNVAQYQQ--NP 360
Query: 199 NQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQV-------LPPSVA 251
N QQN Q YQ S ++ N + P + N P G+ + ++
Sbjct: 361 NVAQYQQNPNVAQ----YQTNS--NEFQNSMVGSPKSSNYKPDGESLEAAESSQYSGTLE 414
Query: 252 DLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
++ C++GKVKEAIE++ + D + L + CG K + AK VH+ ++S
Sbjct: 415 EVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSV 474
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ N+++EMY KCGSM DA VF M +R++ SW MI +A N LG+E + LF
Sbjct: 475 SPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDLFI 534
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
Q ++ GL+P+ Q F+ VF AC + E +HF SM ++GI P +HY +V +LG
Sbjct: 535 QFKESGLKPDGQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVDMLGNS 594
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
G+L EA +F+E K+P EP+ + WE L N R+ G++++ D EL+ L+PS+ +
Sbjct: 595 GYLDEALEFVE-KMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSKA 653
Query: 488 TPPPKKRTAI------------SILDGKSRLVEFR--------NPTLYRDDEKLKALNQM 527
P K + + ++L+ +SR+ E+R N +Y LKA QM
Sbjct: 654 GLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLKA--QM 711
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
KE+ YVP+TR+VLHDIDQE KE+ALL HSERLA+AYGL+S+PAR+P+R+IKNLRVCGDCH
Sbjct: 712 KEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCH 771
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A+KI+S++VGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 772 TALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 807
>gi|49533766|gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
Length = 741
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/537 (39%), Positives = 307/537 (57%), Gaps = 50/537 (9%)
Query: 134 QAYPQQHQPGNHQYQNPSN-NQEYQRSNYQGQRSPNQGQVYPHQ-------------QQP 179
+A P Q+ H QN + N E R N+ G + N G P Q Q
Sbjct: 208 EAQPSQNGVYGHYQQNLNGGNSETSRQNFSGNYTSNGG--VPQQNLSNYDPGNVRNVQSE 265
Query: 180 HSNQY-QNPGNQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNN------- 231
+S +Y QN N ++ + + ++ + Y Q + + S GHQ Q N
Sbjct: 266 NSEKYPQNASGYNMERHTNSSGYSREMMGLYQQNLSGFNPSSAGHQASYQYQNGIVGHQE 325
Query: 232 ----VPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTL 283
P + SV +L LC+EGKVKEA+E++ + V D S + L
Sbjct: 326 MRSSTPVEQSIDSDDSSSKKGSVDELDDLCKEGKVKEAVEVLQLLDQQHVTVDLSRYIML 385
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
++C K E+AK +H++ ++S D+ + NK++EMYGKCGSM DA VF M R++
Sbjct: 386 MDVCSEDKSLEDAKSIHEHLVRSHPHLDIKMYNKILEMYGKCGSMKDAFLVFRKMPQRNL 445
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
SW MI NGLG++ ++LF + ++ G++P+ Q FL VF AC I E +HFES
Sbjct: 446 TSWDTMITWLGKNGLGEDAIELFGEFKETGMKPDGQMFLGVFHACSVVGDIVEGMLHFES 505
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
M ++ I E Y+G+V +LG G+L EA +FIE ++P EP+ E WE + N RIHG++
Sbjct: 506 MSKDYDIDLSMEQYVGVVDMLGSTGYLDEAMEFIE-RMPIEPSIEVWETMMNLCRIHGNL 564
Query: 464 DLEDHAEELMVDLDPSKADPKK-----------IPTPPPKKRTAISILDGKSRLVEFR-N 511
+L D E++ LDPS+ D + I KKR+A S+L+ +S++ E+R
Sbjct: 565 ELGDRCAEIVELLDPSRLDEQSKAGFLAVKASDIAKEKEKKRSAQSLLEARSKVHEYRAG 624
Query: 512 PTLYRDDEKLKALNQ-----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ D EK+ AL + MKE Y+P+T++VLHD+DQE KE AL+ HSERLA A GL+
Sbjct: 625 DRSHPDHEKIYALLRGLKQLMKEDGYIPETKFVLHDVDQETKEDALMAHSERLAFAQGLM 684
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ AR+P+RIIKNLRVCGDCHNA+KI S++VGRE+I+RD KRFHH KDG CSC DYW
Sbjct: 685 NSSARSPIRIIKNLRVCGDCHNALKIASKLVGREIIMRDAKRFHHLKDGLCSCRDYW 741
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 306/515 (59%), Gaps = 47/515 (9%)
Query: 140 HQPGNHQYQNPSNNQEYQRSNYQGQRSPNQGQVYPHQQQPHSNQYQ-NPGNQNFQQPRSP 198
H+ QYQ PS N Y+ + Q Q++PN GQ +QQ P+ QYQ NP +QQ +P
Sbjct: 307 HRENLQQYQ-PSENMYYRENVGQYQQNPNVGQ---YQQNPNIGQYQQNPNVAQYQQ--NP 360
Query: 199 NQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQV-------LPPSVA 251
N QQN Q YQ S ++ N + P + N P G+ + ++
Sbjct: 361 NVAQYQQNPNVAQ----YQTNS--NEFQNSMVGSPKSSNYKPDGESLEAAESSQYSGTLE 414
Query: 252 DLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
++ C++GKVKEAIE++ + D + L + CG K + AK VH+ ++S
Sbjct: 415 EVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSV 474
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ N+++EMY KCGSM DA VF M +R++ SW MI +A N LG+E + LF
Sbjct: 475 SPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDLFI 534
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
Q ++ GL+P+ Q F+ VF AC + E +HF SM ++GI P +HY +V +LG
Sbjct: 535 QFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVDMLGNS 594
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
G+L EA +F+E K+P EP+ + WE L N R+ G++++ D EL+ L+PS+ +
Sbjct: 595 GYLDEALEFVE-KMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSKA 653
Query: 488 TPPPKKRTAI------------SILDGKSRLVEFR--------NPTLYRDDEKLKALNQM 527
P K + + ++L+ +SR+ E+R N +Y LKA QM
Sbjct: 654 GLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLKA--QM 711
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
KE+ YVP+TR+VLHDIDQE KE+ALL HSERLA+AYGL+S+PAR+P+R+IKNLRVCGDCH
Sbjct: 712 KEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCH 771
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
A+KI+S++VGRELI+RD KRFHHFKDG CSC DY
Sbjct: 772 TALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDY 806
>gi|115439809|ref|NP_001044184.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|20160509|dbj|BAB89460.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113533715|dbj|BAF06098.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|125571952|gb|EAZ13467.1| hypothetical protein OsJ_03384 [Oryza sativa Japonica Group]
gi|215704215|dbj|BAG93055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 796
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 277/414 (66%), Gaps = 22/414 (5%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLF 284
++ +P+ + +G+ + +V ++ +LC++GKVKEA+EL+ ++G A ++ L
Sbjct: 386 IDGLPSGASDVTSGESKV--TVEEMDKLCEDGKVKEAVELLALLQEEGTVVHAPQYFKLM 443
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
+ CG+ A+K+H+ QS + D +NNK++EMY KCGSM DA+++F+ +A R++
Sbjct: 444 QACGDATSLAEARKIHNQISQSALAVDTDINNKILEMYAKCGSMEDAKKLFNTIAQRNLA 503
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW+ +I+G+ NGLGDE F+Q ++ G +P+ F VF ACG +++E +HFESM
Sbjct: 504 SWNTIISGFVYNGLGDEATDFFDQFKQTGNKPDSTMFTHVFLACGILGSVDEGMLHFESM 563
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+ +FG++P EHY+ +V +LG+ G++ EA +F+EQ +P EP+ + WE+L N R++G ++
Sbjct: 564 QKDFGVTPTMEHYVSIVNMLGQSGYIDEACEFVEQ-MPVEPSIDVWESLMNMCRLNGFLE 622
Query: 465 LEDHAEELMVDLDPSKA-DPKKIPTPP--------PKKRTAISILDGKSRLVEFR----- 510
L + +++ LD S+ D KI P K+R + ++ +S++ E+R
Sbjct: 623 LGNRCAQIVERLDSSRLNDQSKIGLFPVDASELAKEKERKKANAVEARSKVHEYRAGDRS 682
Query: 511 NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
+P + E+L+ L MKE+ Y+ DTR+VLHD+DQE KE ALL HSERLA++YGLI++
Sbjct: 683 HPEHLKIYEELRYLAAHMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSA 742
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
AR+P+R+IKNLR CGDCH A+KI+S++VGR +I RD KRFHHF++G CSC DYW
Sbjct: 743 ARSPIRVIKNLRSCGDCHTALKIISKLVGRLIIARDAKRFHHFENGVCSCKDYW 796
>gi|125527635|gb|EAY75749.1| hypothetical protein OsI_03662 [Oryza sativa Indica Group]
Length = 796
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 331/552 (59%), Gaps = 27/552 (4%)
Query: 93 QNNHLSYPNQGHGYATNQYSSDRNYPNRGYPNQGQRLPIQGQAYPQQHQPGN-HQYQNPS 151
QNN +Y ++ +GY + S ++ N Q Q + Q A ++PG+ +Y NPS
Sbjct: 251 QNNQQAYDSRQYGYGPSGQSYQKSTGNDQQVFQQQEVD-QRSAGNYANRPGSTSEYPNPS 309
Query: 152 NNQEYQRSNYQGQRSPNQGQVYPHQQQPHSNQYQNPGNQNF-QQPRSPNQWNNQQNQGYP 210
+ +N+Q + G H Q + NF QP + N+ + Q N P
Sbjct: 310 RFNKEHAANFQQGYNGGIGHNVSHAPQSPYVSSKIDAQGNFPGQPMNVNR-SVQHNTHAP 368
Query: 211 QARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM- 269
+P P+ ++ +P+ + G+ + +V ++ +LC++GKVKEA+EL+
Sbjct: 369 ALYQDGIYRNPLTDSPS-IDGLPSGASDVTNGESKV--TVEEMDKLCEDGKVKEAVELLA 425
Query: 270 ---DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++G A ++ L + CG+ A+K+H+ QS + D +NNK++EMY KCG
Sbjct: 426 LLQEEGTAVHAPQYFKLMQACGDATSLAEARKIHNQISQSALAVDTDINNKILEMYAKCG 485
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DA+++F+ +A R++ SW+ MI+G+ NGLGDE F+Q ++ G + + F VF
Sbjct: 486 SMEDAKKLFNTIAQRNLASWNTMISGFVYNGLGDEATDFFDQFKQTGNKSDSTMFTHVFL 545
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
ACG +++E +HFESM+ +FG++P EHY+ +V +LG+ G++ EA++F+EQ +P EP+
Sbjct: 546 ACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIVNMLGQSGYIDEAREFVEQ-MPVEPS 604
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-DPKKIPTPP--------PKKRTAI 497
+ WE+L N R++G ++L + +++ LD S+ D KI P K+R
Sbjct: 605 IDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLNDQSKIGLFPVDASELAKEKERKKA 664
Query: 498 SILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQA 551
+ ++ +S++ E+R +P + E+L+ L MKE+ Y+ DTR+VLHD+DQE KE A
Sbjct: 665 NAVEARSKVHEYRAGDRSHPEHLKIYEELRYLAAHMKEAGYIADTRFVLHDVDQETKEDA 724
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
LL HSERLA++YGLI++ AR+P+R+IKNLR CGDCH A+KI+S++VGR +I RD KRFHH
Sbjct: 725 LLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCHTALKIISKLVGRLIIARDAKRFHH 784
Query: 612 FKDGKCSCGDYW 623
F++G CSC DYW
Sbjct: 785 FENGVCSCKDYW 796
>gi|357130926|ref|XP_003567095.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Brachypodium distachyon]
Length = 771
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 315/524 (60%), Gaps = 61/524 (11%)
Query: 141 QPGNH--QYQNPSNNQEYQRSNYQGQRSPNQGQVYPHQQQPHSNQYQNPGNQNFQQPRSP 198
+PGN QY+NPS+ + + +Q Q HS + + +Q +Q P +
Sbjct: 268 RPGNSDSQYRNPSDFHKEHIAGFQ---------------QGHSVHFGHNASQAYQIPYAT 312
Query: 199 NQWNNQQN-QGYPQARNSYQQVSPGHQIPNQLNNVP----------------NNMNQCPA 241
N+ ++Q+N +GY N+ Q +P N LN+ P N +
Sbjct: 313 NKVDSQRNHRGYVMNVNTDLQRNP---RGNNLNSTPYQDGMYFHHSLPGSQPNEGSPSEV 369
Query: 242 GDQV--LPP-SVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYE 294
D+ +P ++ +L +LC++GKVKEA+E++ +KG+ A + L + C +
Sbjct: 370 SDEASGIPKGTIEELEKLCEDGKVKEALEVLPVLQEKGIVLHAPQYIKLMQACPDASALA 429
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
A+K+H+ +S + D V+NNK+++MY KC SM DA+ +F M SW +I+G+
Sbjct: 430 EARKIHNEISRSGL-ADTVINNKILDMYAKCASMEDAKNLFSTMPQHDATSWSTIISGFV 488
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
DNGLG+E F+Q ++ G +P+ F VF ACG +++E +HFESM+ +FGI+P
Sbjct: 489 DNGLGEEATDFFDQFKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPAM 548
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
+HY +V +LG+ G+L EA++FIE ++P EP+ + WE+L N R++G ++L D +++
Sbjct: 549 DHYASIVSMLGQSGYLDEAREFIE-RMPVEPSIDVWESLMNMCRLNGSMELGDRCAQIIE 607
Query: 475 DLDPSKADPK-KIPTPP--------PKKRTAISILDGKSRLVEFR-----NPTLYRDDEK 520
LDPS+ + + K+ P K+R + ++ +S++ E+R +P +R E+
Sbjct: 608 CLDPSRLNEQSKMGLFPINASDLAKEKERKKANSVEARSKVHEYRAGDRSHPETFRIYEE 667
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L+ L+ MKE+ Y+ DTR+VLHD+DQE KE ALL HSERLA++YGLI++ R+P+R+IKN
Sbjct: 668 LRYLSAHMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAVRSPIRVIKN 727
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR CGDCH A KI+S++VGR++I RD KRFHHF++G CSC DYW
Sbjct: 728 LRSCGDCHTAFKIISKLVGRQIIARDAKRFHHFENGVCSCNDYW 771
>gi|449449711|ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Cucumis sativus]
Length = 671
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/499 (40%), Positives = 293/499 (58%), Gaps = 36/499 (7%)
Query: 152 NNQEYQRSNY--QGQRSPNQGQVYPHQQQPHSNQYQNPGNQN---FQQPRSPNQWNNQQN 206
NN+ Q++NY GQ + P+ P S QY+ QN Q P+ +
Sbjct: 182 NNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYE----QNSIPLQHPQGQYHQGSSVE 237
Query: 207 QGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI 266
Q P ++ Q G Q+ LNNV N D + L C+EGK+KEA+
Sbjct: 238 QYQPNT-DTNQNSMIGTQL---LNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAV 293
Query: 267 ELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
++++ + + D S + L CG + E AK V +Y ++S + NK++EMY
Sbjct: 294 QILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMY 353
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
KCGSM DA +F+ M R++ SW MI A NGLG++ + LF + +K GL+P+ + F+
Sbjct: 354 SKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFI 413
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
VFSAC +E +HFESM +GI+P HY+ +V +LG G + EA +FIE K+P
Sbjct: 414 GVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIE-KMP 472
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAI----- 497
EP + WE + N +R HG ++L D EL+ LD S+ + + P K + +
Sbjct: 473 LEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKERE 532
Query: 498 -------SILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
++L+ +SR+ E+R T + +++++ L QMKE+ Y+P+TR+VLHDID
Sbjct: 533 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 592
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
QEAK ALL HSERLA+AYGLIS+ AR+P+R+IKNLRVCGDCH+A+KI+S+IVGRELI+R
Sbjct: 593 QEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 652
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D KRFHHFKDG CSC DYW
Sbjct: 653 DAKRFHHFKDGLCSCRDYW 671
>gi|449485419|ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g25580-like [Cucumis sativus]
Length = 731
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/499 (40%), Positives = 293/499 (58%), Gaps = 36/499 (7%)
Query: 152 NNQEYQRSNY--QGQRSPNQGQVYPHQQQPHSNQYQNPGNQN---FQQPRSPNQWNNQQN 206
NN+ Q++NY GQ + P+ P S QY+ QN Q P+ +
Sbjct: 242 NNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYE----QNSIPLQHPQGQYHQGSSVE 297
Query: 207 QGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI 266
Q P ++ Q G Q+ LNNV N D + L C+EGK+KEA+
Sbjct: 298 QYQPNT-DTNQNSMIGTQL---LNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAV 353
Query: 267 ELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
++++ + + D S + L CG + E AK V +Y ++S + NK++EMY
Sbjct: 354 QILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMY 413
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
KCGSM DA +F+ M R++ SW MI A NGLG++ + LF + +K GL+P+ + F+
Sbjct: 414 SKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFI 473
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
VFSAC +E +HFESM +GI+P HY+ +V +LG G + EA +FIE K+P
Sbjct: 474 GVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIE-KMP 532
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAI----- 497
EP + WE + N +R HG ++L D EL+ LD S+ + + P K + +
Sbjct: 533 LEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLXKRER 592
Query: 498 -------SILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
++L+ +SR+ E+R T + +++++ L QMKE+ Y+P+TR+VLHDID
Sbjct: 593 EEKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 652
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
QEAK ALL HSERLA+AYGLIS+ AR+P+R+IKNLRVCGDCH+A+KI+S+IVGRELI+R
Sbjct: 653 QEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 712
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D KRFHHFKDG CSC DYW
Sbjct: 713 DAKRFHHFKDGLCSCRDYW 731
>gi|357501057|ref|XP_003620817.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495832|gb|AES77035.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 371
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 247/366 (67%), Gaps = 31/366 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EG V + +ELM +G AD S F +L +LC + K E K+VH++ +S G++ L N++
Sbjct: 36 EGNVNQVLELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRL 95
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I +Y KCGS+ DAR+VFD M DR++ SW+LMI GY NGLG +GL +F+QMR+ G+ P+E
Sbjct: 96 IGLYVKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQMRQQGIVPDE 155
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+TF V + C D +EE G EHYLG+V + G G L EAQ+FIE
Sbjct: 156 ETFALVLAVCALVDGVEE----------------GMEHYLGVVNIFGCAGPLDEAQEFIE 199
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK-KIPTPPPKKRTAI 497
+P E + WE LRN+ARI+GD++ ED A+EL+ DPSKA K+P P KK++AI
Sbjct: 200 N-MPIEAGVDVWETLRNFARIYGDLEREDRADELLTVRDPSKAAADDKVPLPQRKKQSAI 258
Query: 498 SILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
++L+ K+R+ E+R L + + + DT ++ + + +E+AL YHSE
Sbjct: 259 NMLEEKNRVSEYRCNILGK-----------QVMFLIRDTYSMI--LMRRKREKALRYHSE 305
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
RLAIAYGLISTP RT LRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNKRFHHFKDGKC
Sbjct: 306 RLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKC 365
Query: 618 SCGDYW 623
SCGDYW
Sbjct: 366 SCGDYW 371
>gi|356528308|ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 307/541 (56%), Gaps = 39/541 (7%)
Query: 121 GYPNQGQRLPIQGQAYPQQHQPGNHQYQNP-SNNQEYQRSNYQGQRSPNQ-GQVYPHQQQ 178
GY QG Q + G+ + NP ++ + QG +SPN P + Q
Sbjct: 125 GYFGQGDMKMQQKVGAGVDNAWGSGMHANPFVEKHDWTQEPGQGMQSPNAYSSPGPLESQ 184
Query: 179 PHSNQYQNPGNQNFQQPRSPN-QWNNQQNQGYPQARNSYQQVSPGHQIPN---------- 227
+ N +FQQP++ + + +++ YP S Q + G +PN
Sbjct: 185 GNLRGDLNQNIDHFQQPQNVHYKGSHEMRPQYPGYGQSQQSLKDGQYLPNLNTAQRSVVG 244
Query: 228 ---QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASC----F 280
N P+ + + D ++ +L C EG VKEA+E+++ K D +
Sbjct: 245 SHLSSNANPDGESAKASNDSPYRGTLEELDNFCIEGNVKEAVEVLELLEKLDIPVDLPRY 304
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
L CG K E AK VH + LQ + N+++EMY +CGS+ DA +F++M +
Sbjct: 305 LQLMHQCGENKSLEEAKNVHRHALQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPE 364
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
R++ +W MI A NG ++ + LF Q + LGL+P+ Q F+ V ACG I+E H
Sbjct: 365 RNLTTWDTMITQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGVLFACGMLGDIDEGMQH 424
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
FESM ++GI P H++ +V ++G GHL EA +FIE K+P +P+A+ WE L N R+H
Sbjct: 425 FESMNKDYGIVPSMTHFVSVVDMIGSIGHLDEAFEFIE-KMPMKPSADIWETLMNLCRVH 483
Query: 461 GDIDLEDHAEELMVDLDPS----KADPKKIP------TPPPKKRTAIS--ILDGKSRLVE 508
G+ L D EL+ LD S ++ +P T +KRT + +L+ +SR+ E
Sbjct: 484 GNTGLGDCCAELVEQLDSSCLNEQSKAGLVPVKASDLTKEKEKRTLTNKNLLEVRSRVRE 543
Query: 509 FR-NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIA 562
+R T + + +K+ AL +QMKE+ YVP+T++VLHDIDQE KE+ALL HSERLAIA
Sbjct: 544 YRAGDTFHPESDKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAIA 603
Query: 563 YGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
YGL+++PAR P+R+IKNLRVCGDCH A+KI+S++VGRELI+RD KRFHHF DG CSC DY
Sbjct: 604 YGLLNSPARAPMRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFNDGLCSCRDY 663
Query: 623 W 623
W
Sbjct: 664 W 664
>gi|356510940|ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 202/500 (40%), Positives = 295/500 (59%), Gaps = 40/500 (8%)
Query: 162 QGQRSPNQ-GQVYPHQQQPHSNQYQNPGNQNFQQPRSPN-QWNNQQNQGYPQARNSYQQV 219
Q +SPN G P + Q + N +FQQP + + + +++ Q YP + Q +
Sbjct: 167 QKMQSPNAYGSPRPLESQGNLRGDLNQNIDHFQQPENVHYKGSHEMRQQYPGSGQFQQSL 226
Query: 220 SPGHQIPNQLN---------NVPNNMNQCPAGDQVLPPS-----VADLARLCQEGKVKEA 265
G +PN LN ++ NN N D+ S + +L C EG VKEA
Sbjct: 227 KDGRYLPN-LNIAQRSGVGSHLSNNANHDGESDKASNDSPYRATLEELDNFCIEGNVKEA 285
Query: 266 I---ELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+ EL++K + D + L C K E AK VH + Q + N+++EM
Sbjct: 286 VNVLELLEKLHIPVDLPRYLQLMHQCAENKSLEEAKIVHRHTSQHLSPLQVSTYNRILEM 345
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y +CGS+ DA +F++M +R++ +W MI A NG ++ + LF Q + LGL+P+ Q F
Sbjct: 346 YLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAEDSIDLFTQFKNLGLKPDGQMF 405
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+ V AC I+E +HFESM ++GI P H++ +V ++G GHL EA +FIE ++
Sbjct: 406 IGVLFACSVLGDIDEGMLHFESMSKDYGIVPSMTHFVSVVDMIGSIGHLDEAFEFIE-RM 464
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAIS--- 498
P EP+AE WE L N R+HG+ L D EL+ LD S+ + + P K + ++
Sbjct: 465 PMEPSAETWETLMNLCRVHGNTGLGDRCAELVEQLDSSRLNEQSKAGLVPVKASDLTKEK 524
Query: 499 ---------ILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDI 543
+L+ +SR+ E+R T + +++K+ AL +QMKE+ YVP+T++VLHDI
Sbjct: 525 EKKNLASKNLLEVRSRVREYRAGDTSHPENDKIYALLRGLKSQMKEAGYVPETKFVLHDI 584
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
DQE KE+ALL HSERLA+AYGL+++PAR P+R+IKNLRVCGDCH A+KI+S++VGRELI+
Sbjct: 585 DQEGKEEALLAHSERLAVAYGLLNSPARAPMRVIKNLRVCGDCHTALKIISKLVGRELII 644
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD KRFHHFKDG CSC DYW
Sbjct: 645 RDAKRFHHFKDGLCSCRDYW 664
>gi|217073734|gb|ACJ85227.1| unknown [Medicago truncatula]
Length = 452
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 239/337 (70%), Gaps = 5/337 (1%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ A QEG V + +ELM +G AD S F +L +LC + K E K+VH++ +S G
Sbjct: 73 VNFAHFLQEGNVNQVLELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGG 132
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ L N++I +Y KCGS+ DAR+VFD + DR++ S +LMI GY NGLG +GL +F+QMR
Sbjct: 133 NVELCNRLIGLYVKCGSVKDARKVFDKVPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMR 192
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G+ P+E+TF V + C D +EE + FESMK E+GI PG EHYLG+V + G G L
Sbjct: 193 QQGVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNIFGCAGRL 251
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EA +FIE +P E E WE LRN+ARIHGD++ ED A+EL+ LDPSKA K+P P
Sbjct: 252 DEAHEFIEN-MPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPSKAAADKVPLPQ 310
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALN-QMKESTYVPDTRYVLHDIDQEA 547
KK++AI++L+ K+R+ E+R Y++ D KL+ L QM+E+ YVPDTRYVLHDID+E
Sbjct: 311 RKKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLHDIDEEE 370
Query: 548 KEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
KE+AL YHSERLAIAYGLISTP RT LRIIKNLR+CG
Sbjct: 371 KEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICG 407
>gi|326524400|dbj|BAK00583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 287/461 (62%), Gaps = 27/461 (5%)
Query: 185 QNPGNQNFQQPRSPNQ-WNNQQN--QGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPA 241
Q+ N+ + +P S Q + +N P N Y Q S +PN + P+ ++ +
Sbjct: 8 QHSHNRTYPEPHSDIQPITSAENNLSSTPYQDNMYFQHSLPGSLPN--DGSPSEVSNEVS 65
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAK 297
G + ++ +L +LC++G +KEA+E L KG+ A ++ L + C + A+
Sbjct: 66 G--ISKGTIEELDKLCEDGNIKEALEALPVLQGKGIVLHAPQYFKLMQACADASALAEAR 123
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H+ QS + D+ +NNK+++MY KC SM DA+++F MA + SW +I+G+ NG
Sbjct: 124 QIHNQISQSELAVDIDVNNKILDMYAKCASMEDAKKLFSTMAQHDLTSWSTIISGFVHNG 183
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
LG+E F++ ++ G +P+ F VF ACG +++E +HFESM+ +FGI+P +HY
Sbjct: 184 LGEEATDFFDRFKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPSVDHY 243
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +LG+ G++ EA++FIE ++P EP+ + WE+L N R++G ++L D +++ LD
Sbjct: 244 ASIVNMLGQSGYVDEAREFIE-RMPTEPSVDIWESLMNMCRLNGYLELGDRCAQIIERLD 302
Query: 478 PSKADPKKIPTPPP---------KKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKA 523
PS+ + + P K+R + + +S++ E+R +P + E+L+
Sbjct: 303 PSRLNEQSKTGLFPVNASDLAKEKERKKANTAEARSKVHEYRAGDRSHPETLKIYEELRY 362
Query: 524 LN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L MKE+ Y+ DTR+VLHD+D E KE ALL HSERLA++YGLI++ AR+P+R+IKNLR
Sbjct: 363 LAAHMKEAGYIADTRFVLHDVDPETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRS 422
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH A+KI+S++VGR++I RD KRFHHF++G CSC DYW
Sbjct: 423 CGDCHTALKIISKLVGRQIIARDAKRFHHFENGLCSCKDYW 463
>gi|224128233|ref|XP_002320276.1| predicted protein [Populus trichocarpa]
gi|222861049|gb|EEE98591.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 168/336 (50%), Positives = 234/336 (69%), Gaps = 7/336 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E A+ +HD ++S D+ NK++EMY KCG+M +A VFD+M + ++ SW++MI
Sbjct: 2 EEARVIHDCIVRSQSPLDVGTLNKILEMYSKCGAMDEAFSVFDNMQECNLTSWYIMITWL 61
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A NG G++ + LF Q ++ GL+P+ Q F+ VFSAC I E +HFESM EF I P
Sbjct: 62 AKNGYGEDAIDLFNQFKQGGLKPDAQIFVGVFSACNVLGDINEGLLHFESMWKEFSIVPS 121
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY+ +V +LG G+L EA +FIE K+P EP+ + WE L N R HG ++L D EL+
Sbjct: 122 MEHYVSIVDMLGSNGYLVEALEFIE-KMPMEPSVDVWETLMNLCRAHGHLELGDRCAELI 180
Query: 474 VDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQM 527
LDPS+ + + PKK + ++LD +SR+ E+R T + D +++ AL QM
Sbjct: 181 EQLDPSRLNEQSNAGLVPKKTASQNLLDVRSRVHEYRAGDTSFPDRDRVYALLRGMKAQM 240
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
K++ Y+P TR+VLHDID+E+KE ALL HSERLA A+GL++T AR+PLR++KNLR CGDCH
Sbjct: 241 KDAGYIPVTRFVLHDIDEESKEDALLAHSERLATAHGLLTTAARSPLRVVKNLRFCGDCH 300
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NA+KI+S++VGR+LI+RD KRFHHFKDG CSCGDYW
Sbjct: 301 NAMKIISKLVGRQLIMRDAKRFHHFKDGVCSCGDYW 336
>gi|414880613|tpg|DAA57744.1| TPA: pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 763
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/551 (35%), Positives = 299/551 (54%), Gaps = 82/551 (14%)
Query: 149 NP-SNNQEYQRSNYQGQRSPNQGQVYPHQQQPHSNQYQNP-------------------- 187
NP N+Q Q+ Y RS G YP + H +QY NP
Sbjct: 219 NPVGNSQRVQKQQYVDHRS---GGSYPDRSGHHPSQYVNPTHSRKEHVAGFQQGNNSNFG 275
Query: 188 --GNQNFQQPRSPNQWNNQQ-NQGYPQARNS-YQQVSPG-----HQIPNQLNNVPNNMNQ 238
+Q +Q P Q + +QGY N+ Q++S G H + N++N
Sbjct: 276 YNASQAYQSPYFTRQADTHSTSQGYSMYLNTDVQRLSHGVHQEKHSHAQSAGSFGNHVNS 335
Query: 239 CP----------------AGDQVLPPS---------VADLARLCQEGKVKEAIELM---- 269
P G PS V +L + C +G VKEA+E++
Sbjct: 336 APHEYGKYHQSLQGNPSNVGSPYEVPSEAGSKHKCTVEELEKFCDDGNVKEALEVLAMLK 395
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ + A ++ L + CG+ A+ +H +S++ D NK++EMY +CGSM
Sbjct: 396 ENRIVLHAPQYFRLMQACGDATALSEARLIHSQISESSLTVDTDFQNKIMEMYARCGSME 455
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
DA+++F M ++ SW+ MI+G+ N LG+E + FE+ ++ G +P+ F VF ACG
Sbjct: 456 DAKKIFSSMDHHNLTSWNTMISGFVHNVLGEEAIDFFERFKQTGDKPDHGMFRHVFLACG 515
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
++ E +HFESM+ +FGI P TEHY +V +LG+ G++ EA +F+E ++P EP+ E
Sbjct: 516 ILGSVNEGMLHFESMQKDFGIHPTTEHYASIVTMLGQSGYIVEAYEFVE-RMPVEPSIEV 574
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK-KIPTPP--------PKKRTAISIL 500
WE L N R++G ++L D +++ LD S+ + + K+ P K+R S+
Sbjct: 575 WENLMNMCRLNGFLELGDRCAQIIECLDSSRLNEQSKMGLFPVDVSDLAKEKERKKASVA 634
Query: 501 DGKSRLVEFR--------NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+ +S++ E+R P +Y + L L MKE+ Y+ DTR+VLHD+DQE KE AL
Sbjct: 635 EARSKVHEYRAGDRSHPDTPKIYEELRYL--LAHMKEAGYIADTRFVLHDVDQETKEDAL 692
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
L HSERLAI+YGLI++ R+P+R+IKNLR CGDCH A KI+S++VGR++I RD KRFHHF
Sbjct: 693 LAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCHTAFKIISKLVGRQIIARDAKRFHHF 752
Query: 613 KDGKCSCGDYW 623
++G CSC DYW
Sbjct: 753 ENGVCSCKDYW 763
>gi|242054359|ref|XP_002456325.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
gi|241928300|gb|EES01445.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
Length = 763
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 312/602 (51%), Gaps = 104/602 (17%)
Query: 101 NQGHGYATNQYSSDR---NYPNRGYPNQGQRLPIQGQAYPQQHQPGNHQYQNP-SNNQEY 156
+ G+ +NQ +R NY GY GQ P NP NN
Sbjct: 187 SSGYNTQSNQKVYEREGVNYGQYGYGPSGQACP------------------NPIGNNHHI 228
Query: 157 QRSNYQGQRSPNQGQVYPHQQQPHSNQYQNPGN------QNFQQPRSPN----------- 199
Q+ Y RS G+ YP + + H +QY NP + FQQ + N
Sbjct: 229 QKQQYVDHRS---GESYPDRSRNHPSQYVNPTHFHKEHVAGFQQGNNSNFGYNASQSYQS 285
Query: 200 -QWNNQQN-----QGYPQARNSYQQVSPGHQI--------------PNQLNNVPNNMN-- 237
+N Q + QGY N+ Q P H + N LNN P+
Sbjct: 286 PHFNRQADMHSTPQGYSMYLNTDVQ-RPSHGVHQEKHSHAQSAGSFGNHLNNAPHEDGKY 344
Query: 238 ---------------QCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADAS 278
+ P +V +L + C++G VKEA+E++ + +
Sbjct: 345 HQSLQGNFSNVGLPYEVPKAVGKHKGTVEELEKFCEDGNVKEALEVLAMLKENRIVLHPP 404
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
++ L + CG+ A+ +H +S+ D N++++MY KCGSM DA+++F M
Sbjct: 405 QYFRLMQACGDAAALSEARLIHSQISESSTVVDTDFQNEILKMYAKCGSMEDAKKLFSSM 464
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
++ SW MI+G+ N LG+E + F++ ++ G +P+ F VF ACG ++ E
Sbjct: 465 DHHNLTSWSTMISGFVHNTLGEEAIDFFDRFKQTGDKPDLGMFRHVFLACGILGSVNEGM 524
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+HFESM+ +FGI P EHY ++ +LG+ G++ EA +F+EQ +P EP+ E WE L N R
Sbjct: 525 LHFESMQKDFGIHPTMEHYASIISMLGQSGYIAEAYEFVEQ-MPVEPSIEVWENLMNMCR 583
Query: 459 IHGDIDLEDHAEELMVDLDPSKADPK-KIPTPP--------PKKRTAISILDGKSRLVEF 509
++G ++L D +++ LD S+ + + K+ P K+R S+ + +S++ E+
Sbjct: 584 LNGFLELGDRCAQIIERLDSSRLNEQSKMGLFPVDASDLAKEKERKKASVAEARSKVHEY 643
Query: 510 R--------NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
R P +Y + L L MKE+ Y+ DTR+VLHD+DQE KE ALL HSERLAI
Sbjct: 644 RAGDRSHPDTPKIYEELRYL--LAHMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAI 701
Query: 562 AYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGD 621
+YGLI++ R+P+R+IKNLR CGDCH A KI+S++VGR++I RD KRFHHF++G CSC D
Sbjct: 702 SYGLITSAPRSPIRVIKNLRSCGDCHTAFKIISKLVGRQIIARDAKRFHHFENGVCSCKD 761
Query: 622 YW 623
YW
Sbjct: 762 YW 763
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/377 (43%), Positives = 236/377 (62%), Gaps = 23/377 (6%)
Query: 252 DLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
DL RLC++G V+ A+ ++D+ GV A L ++C + K E K+ H+ ++ +
Sbjct: 218 DLKRLCRQGNVEAALHVIDEMERNGVTVSALGLAELLQVCIDLKLLEVGKRAHELVMRLS 277
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+++ NK++EMY G A RVF+ M R++DSW+ MI G NG G+E L +F
Sbjct: 278 SNPSVIVFNKLLEMYFDLGDTRSACRVFEEMRGRTLDSWNRMILGLVKNGEGEEALAIFS 337
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+++K G++P+ TF+ V SAC A+EE HF SM +++GI+P EH+ +V + G+
Sbjct: 338 KLKKDGIEPDGSTFIGVLSACECLGAVEEGLAHFNSMSTDYGITPSMEHFAIIVDLFGRL 397
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
+ EA++FI +P EP++ W+ L+ Y + VD +P+
Sbjct: 398 QKIAEAKEFIAS-MPLEPSSMIWQTLQKYLKTE------------RVD-EPAPLTTGSGL 443
Query: 488 TPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQE 546
KKR + + + +P + EKL++L++ +KE+ YV DTRYVLHD+DQE
Sbjct: 444 KLSHKKRVKSNFVSKQKN----ASPEKSKAYEKLRSLHKGVKEAGYVSDTRYVLHDLDQE 499
Query: 547 AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
AKE++LLYHSERLAIAYGLISTP T LRIIKNLR+CGDCHN IKI+S I RE+IVRDN
Sbjct: 500 AKEKSLLYHSERLAIAYGLISTPPGTTLRIIKNLRICGDCHNFIKILSNIEKREIIVRDN 559
Query: 607 KRFHHFKDGKCSCGDYW 623
KRFHHF+DGKCSCGDYW
Sbjct: 560 KRFHHFRDGKCSCGDYW 576
>gi|357487235|ref|XP_003613905.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515240|gb|AES96863.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 768
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/413 (42%), Positives = 240/413 (58%), Gaps = 33/413 (7%)
Query: 231 NVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFEL 286
NV NMN + +L C EG+VKEAI+++ + D L +
Sbjct: 294 NVFRNMNMTE------RKLIEELDSSCMEGEVKEAIDVLQVLEKFHILVDLDRCLRLMQQ 347
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG K E AK VH Y LQ + N ++EMY +CGS+ DA VF +M +R + +
Sbjct: 348 CGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTI 407
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+MI A NG ++ + LF Q ++ GL+P+ Q F+ VF AC I E +HFESM
Sbjct: 408 CIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSR 467
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
++ I P EHY+ LV ++G GHL EA +FIE K+P EP+ E WE L N R+HG+ +L
Sbjct: 468 DYDIVPTMEHYVSLVDMIGSIGHLDEALEFIE-KMPMEPSVEVWETLMNSCRVHGNTELG 526
Query: 467 DHAEELMVDLDPSKADPKK------IPTPPPKKRTAISI------LDGKSRLVEFR---- 510
D EL+ LDPS+ + K I T K + + +R+ E+R
Sbjct: 527 DRCAELVEKLDPSRLNEKSKVGLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDT 586
Query: 511 ----NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
N +Y +L+ QMKE+ Y+ +TR+ LHD+DQE KE ALL HSERLAIA GL+
Sbjct: 587 SLPENNMIYVLLRRLRV--QMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLL 644
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
++PAR+ +R+IKNLRVCGDCH A+KI+S +VGRE I+RD KRFHHFK+G CSC
Sbjct: 645 NSPARSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSC 697
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 234 NNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK----ADASCFYTLFELCGN 289
N+ NQ A D + L +C+EG+VK+AI ++ + K D L +LCG
Sbjct: 194 NSDNQNSASD---TDKLKKLDEVCKEGEVKKAIAVLQELEKLHTYVDLYLCLRLMQLCGK 250
Query: 290 PKWYENAKKVHDYFLQS----TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
++ E AK VH Y LQ T+R + +++EMY +CGS+ DA VF +M +M
Sbjct: 251 AEFLEEAKVVHIYVLQHLSPLTVRTCI----RILEMYFQCGSVDDAVNVFRNM---NMTE 303
Query: 346 WHLM--INGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
L+ ++ G E + + + + K + + L + CG ++EEA
Sbjct: 304 RKLIEELDSSCMEGEVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEA 357
>gi|255546183|ref|XP_002514151.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546607|gb|EEF48105.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 388
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/268 (53%), Positives = 203/268 (75%), Gaps = 1/268 (0%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
DL LC EGKV+EA+E M +G AD S F L + CG+ K + K+VH++ +ST
Sbjct: 92 VDLMSLCDEGKVEEALECMGQGASADCSVFGALLDCCGSLKLLDMGKRVHEFLRRSTFAD 151
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ +NNK+IEMYG CGS+ DARRVFD M +R+M SWHL+I+GYA NG GD+GL LFE+M+
Sbjct: 152 DIEMNNKLIEMYGNCGSVRDARRVFDKMRERNMRSWHLLISGYAANGQGDDGLLLFEEMK 211
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ GL+P+E TF VF+AC SA AI+E + FE++++E+G+SP +HYLG++ +LGK GHL
Sbjct: 212 ESGLRPDENTFSVVFAACSSAGAIKEGLLFFEALRNEYGMSPRIDHYLGVIDILGKAGHL 271
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
EA++FIE ++PFEPT E W ALR++A+IHGDI+LEDH ++L+V LDPS+A+ KI PP
Sbjct: 272 CEAKEFIE-RMPFEPTMEVWMALRSFAQIHGDIELEDHVQQLLVALDPSEANANKIALPP 330
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDD 518
KK++ I++L+GK+ L E+R YR++
Sbjct: 331 RKKQSVINMLEGKNSLGEYRCTEPYREE 358
>gi|51969704|dbj|BAD43544.1| putative protein [Arabidopsis thaliana]
Length = 537
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 292/538 (54%), Gaps = 42/538 (7%)
Query: 110 QYSSDRNYPNRGYPNQGQRLPIQGQAYPQQHQPGNHQYQNPSNNQE-----YQRSNYQGQ 164
+YSS +Y + G P G P + + Y N N E +Q+++Y+
Sbjct: 18 RYSSLFSYLSTAALRLGFENPTNGN--PMDNSSHHIGYVNGFNGGEQSLGGFQQNSYEQS 75
Query: 165 RSPNQGQVYPHQQQPHSNQYQNPGNQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQ 224
+P GQ P + YQN N+N Q ++ NQ+NQ + + + G+
Sbjct: 76 LNPVSGQ------NPTNRFYQNGYNRN-QSYGEHSEIINQRNQNWQSSDGCSSYGTTGNG 128
Query: 225 IPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCF 280
+P + N N+ Q +G S+ +L +C+EGKVK+A+E++ ++G D
Sbjct: 129 VPQENNTGGNHFQQDHSGH----SSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRL 184
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+ + +LCG+ + + AK VH++ S D+ N +IEMY CGS+ DA VF+ M +
Sbjct: 185 FWMAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPE 244
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
R++++W +I +A NG G++ + F + ++ G +P+ + F +F ACG + E +H
Sbjct: 245 RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLH 304
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
FESM E+GI P EHY+ LV +L + G+L EA +F+E EP + WE L N +R+H
Sbjct: 305 FESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE---SMEPNVDLWETLMNLSRVH 361
Query: 461 GDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAI------SILDGKSRLVEF----- 509
GD+ L D ++++ LD S+ + + P K + + + G + + +
Sbjct: 362 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGD 421
Query: 510 ----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
N LY + LK M E YVP ++ LHD+DQE+K++ L H+ER A
Sbjct: 422 ISRPENRELYMALKSLK--EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTF 479
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ TPAR+ +R++KNLRVC DCHNA+K+MS+IVGRELI RD KRFHH KDG CSC +YW
Sbjct: 480 LDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>gi|15236806|ref|NP_194971.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75209381|sp|Q9SUU7.1|PP346_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32450, mitochondrial; Flags: Precursor
gi|4049347|emb|CAA22572.1| putative protein [Arabidopsis thaliana]
gi|7270149|emb|CAB79962.1| putative protein [Arabidopsis thaliana]
gi|50897242|gb|AAT85760.1| At4g32450 [Arabidopsis thaliana]
gi|332660662|gb|AEE86062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 292/538 (54%), Gaps = 42/538 (7%)
Query: 110 QYSSDRNYPNRGYPNQGQRLPIQGQAYPQQHQPGNHQYQNPSNNQE-----YQRSNYQGQ 164
+YSS +Y + G P G P + + Y N N E +Q+++Y+
Sbjct: 18 RYSSLFSYLSTAALRLGFENPTNGN--PMDNSSHHIGYVNGFNGGEQSLGGFQQNSYEQS 75
Query: 165 RSPNQGQVYPHQQQPHSNQYQNPGNQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQ 224
+P GQ P + YQN N+N Q ++ NQ+NQ + + + G+
Sbjct: 76 LNPVSGQ------NPTNRFYQNGYNRN-QSYGEHSEIINQRNQNWQSSDGCSSYGTTGNG 128
Query: 225 IPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCF 280
+P + N N+ Q +G S+ +L +C+EGKVK+A+E++ ++G D
Sbjct: 129 VPQENNTGGNHFQQDHSGH----SSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRL 184
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+ + +LCG+ + + AK VH++ S D+ N +IEMY CGS+ DA VF+ M +
Sbjct: 185 FWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPE 244
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
R++++W +I +A NG G++ + F + ++ G +P+ + F +F ACG + E +H
Sbjct: 245 RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLH 304
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
FESM E+GI P EHY+ LV +L + G+L EA +F+E EP + WE L N +R+H
Sbjct: 305 FESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE---SMEPNVDLWETLMNLSRVH 361
Query: 461 GDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAI------SILDGKSRLVEF----- 509
GD+ L D ++++ LD S+ + + P K + + + G + + +
Sbjct: 362 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGD 421
Query: 510 ----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
N LY + LK M E YVP ++ LHD+DQE+K++ L H+ER A
Sbjct: 422 ISRPENRELYMALKSLK--EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTF 479
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ TPAR+ +R++KNLRVC DCHNA+K+MS+IVGRELI RD KRFHH KDG CSC +YW
Sbjct: 480 LDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>gi|296082000|emb|CBI21005.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 236/427 (55%), Gaps = 74/427 (17%)
Query: 213 RNSYQQVSPGHQI----PNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL 268
R + QQ P I P N P+ + A ++ ++ C++GKVKEAIE+
Sbjct: 308 RENLQQYQPSENIMVGSPKSSNYKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEV 367
Query: 269 MDKGVK----ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
+ K D + L + CG K + AK VH+ ++S + N+++EMY K
Sbjct: 368 LGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSK 427
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CGSM DA VF M +R++ SW MI +A N LG+E + L
Sbjct: 428 CGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDL------------------- 468
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
++GI P +HY +V +LG G+L EA +F+E K+P E
Sbjct: 469 ---------------------KDYGIVPSMKHYASMVDMLGNSGYLDEALEFVE-KMPLE 506
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
P+ + WE L N R+ G++++ D EL+ L+PS+ T K R S
Sbjct: 507 PSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRL------TEQSKVR---------S 551
Query: 505 RLVEFR--------NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
R+ E+R N +Y LKA QMKE+ YVP+TR+VLHDIDQE KE+ALL HS
Sbjct: 552 RVHEYRAGDTSHPENDKIYAKLRGLKA--QMKEAGYVPETRFVLHDIDQEGKEEALLAHS 609
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
ERLA+AYGL+S+PAR+P+R+IKNLRVCGDCH A+KI+S++VGRELI+RD KRFHHFKDG
Sbjct: 610 ERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFKDGL 669
Query: 617 CSCGDYW 623
CSC DYW
Sbjct: 670 CSCRDYW 676
>gi|358347047|ref|XP_003637574.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503509|gb|AES84712.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 753
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 236/409 (57%), Gaps = 40/409 (9%)
Query: 231 NVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNP 290
NV NMN + +L C EG+VKEAI+++ L +
Sbjct: 294 NVFRNMNMTE------RKLIEELDSSCMEGEVKEAIDVLQ-----------VLEKFHIPT 336
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
K E AK VH Y LQ + N ++EMY +CGS+ DA VF +M DR + + ++MI
Sbjct: 337 KSLEEAKVVHRYVLQHLSPLKVSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMI 396
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
A NG ++ + LF Q ++ GL+P+ Q F+ VF AC I E +HFESM ++ I
Sbjct: 397 KQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEI 456
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
P HY+ +V ++G G+L EA +FIE K+P EP+ E WE L N R+HG+ +L D
Sbjct: 457 VPTMAHYVSVVDMIGSIGNLDEALEFIE-KMPMEPSVEVWETLMNSCRVHGNTELGDRCA 515
Query: 471 ELMVDLDPSKADPKKIPTPPPKKRTAISI------------LDGKSRLVEFR-------- 510
EL+ LDPS+ + K + + I+ + +R+ E+R
Sbjct: 516 ELVEKLDPSRLNEKSKVCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPE 575
Query: 511 NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
N +Y +L+ QMKE+ Y+ +TR+ LHD+DQE KE ALL HSERLAIA GL+++PA
Sbjct: 576 NNMIYALLRRLRV--QMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 633
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
R+ +R+IKNLRVCGDCH A+KI+S +VGRE I+RD KRFHHFK+G CSC
Sbjct: 634 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSC 682
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 227/400 (56%), Gaps = 38/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EAI+L + G+K D F + C +P + + K +H + + D+
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVY 435
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + ++ MY KCGSM DAR VF+ M++R++ +W MI G A +G E L+ FEQM+K G
Sbjct: 436 LQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P++ TF +V SAC +EE HF SM ++GI P EHY V +LG+ GHL EA
Sbjct: 496 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 555
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+ I +PF+P W AL + RIH D++ + A E ++ LDP
Sbjct: 556 ENVI-LTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAA 614
Query: 481 ----ADPKKIPTPPPKKRTA-------ISILDGKSRLVEFRNPT------LYRDDEKLKA 523
D +K+ K+ I + DGK + + + +Y + KL
Sbjct: 615 AGRYEDAEKVRQVMEKRDVVKEPGQSWIEV-DGKVHVFHVEDKSHPEAKEIYAELGKLT- 672
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
Q+KE YVPDTR+VLHD+D+E K Q L HSERLAI YGL+ TP TP+RI+KNLRVC
Sbjct: 673 -EQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVC 731
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH A K +S++VGRE+I RD RFHHF DG CSCGD+W
Sbjct: 732 GDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 137/259 (52%), Gaps = 24/259 (9%)
Query: 251 ADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
D++ LC++G++KEA+ +++ +G + + F L + C + E ++VH L+S
Sbjct: 66 GDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKS 125
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I+ + L N ++ MY KCGS+TDARRVFD + DR++ SW MI + E + +
Sbjct: 126 GIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCY 185
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVGV 423
E M+ G +P++ TF+++ +A + + ++ +H E K+ + P GT LVG+
Sbjct: 186 ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTS----LVGM 241
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
KCG + +A Q I KLP + + + YA+ G +D+ A EL+ + ++ P
Sbjct: 242 YAKCGDISKA-QVIFDKLPEKNVVTWTLLIAGYAQ-QGQVDV---ALELLEKMQQAEVAP 296
Query: 484 KKIPTPPPKKRTAISILDG 502
KI T SIL G
Sbjct: 297 NKI--------TYTSILQG 307
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q+G+V A+EL++K +A+ + + ++ + C P E+ KKVH Y +QS
Sbjct: 270 IAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY 329
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + N +I MY KCG + +AR++F + R + +W M+ GYA G DE + LF +
Sbjct: 330 GREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRR 389
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL--GLVGVLG 425
M++ G++P++ TF + ++C S ++E IH + + + + + + YL LV +
Sbjct: 390 MQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL----DVYLQSALVSMYA 445
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG + +A+ Q E W A+ HG
Sbjct: 446 KCGSMDDARLVFNQM--SERNVVAWTAMITGCAQHG 479
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 8/216 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G K D F +L NP+ + +KVH ++ + + + ++ MY KCG ++ A
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKA 251
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+ +FD + ++++ +W L+I GYA G D L+L E+M++ + PN+ T+ ++ C +
Sbjct: 252 QVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTP 311
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A+E +H ++S +G + L+ + KCG L EA++ LP +
Sbjct: 312 LALEHGKKVHRYIIQSGYGREIWVVN--ALITMYCKCGGLKEARKLFGD-LPHRDVVTWT 368
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ YA+ + D A +L + P K+
Sbjct: 369 AMVTGYAQ----LGFHDEAIDLFRRMQQQGIKPDKM 400
>gi|358345888|ref|XP_003637006.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355502941|gb|AES84144.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 679
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 236/409 (57%), Gaps = 40/409 (9%)
Query: 231 NVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNP 290
NV NMN + +L C EG+VKEAI+++ L +
Sbjct: 220 NVFRNMNMTE------RKLIEELDSSCMEGEVKEAIDVLQ-----------VLEKFHIPT 262
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
K E AK VH Y LQ + N ++EMY +CGS+ DA VF +M DR + + ++MI
Sbjct: 263 KSLEEAKVVHRYVLQHLSPLKVSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMI 322
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
A NG ++ + LF Q ++ GL+P+ Q F+ VF AC I E +HFESM ++ I
Sbjct: 323 KQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEI 382
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
P HY+ +V ++G G+L EA +FIE K+P EP+ E WE L N R+HG+ +L D
Sbjct: 383 VPTMAHYVSVVDMIGSIGNLDEALEFIE-KMPMEPSVEVWETLMNSCRVHGNTELGDRCA 441
Query: 471 ELMVDLDPSKADPKKIPTPPPKKRTAISI------------LDGKSRLVEFR-------- 510
EL+ LDPS+ + K + + I+ + +R+ E+R
Sbjct: 442 ELVEKLDPSRLNEKSKVCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPE 501
Query: 511 NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
N +Y +L+ QMKE+ Y+ +TR+ LHD+DQE KE ALL HSERLAIA GL+++PA
Sbjct: 502 NNMIYALLRRLRV--QMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 559
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
R+ +R+IKNLRVCGDCH A+KI+S +VGRE I+RD KRFHHFK+G CSC
Sbjct: 560 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSC 608
>gi|357447727|ref|XP_003594139.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483187|gb|AES64390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 230/389 (59%), Gaps = 25/389 (6%)
Query: 249 SVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
++ +L C++GKVKEA+E + K + D L +CG K E A+ VH + L
Sbjct: 102 TLEELDSFCRDGKVKEAVENLQKLEKLHIHVDLQRCLQLMRICGKAKSLEEARVVHRHAL 161
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
Q + +N+V+EMY +CGS+ DA VF M + + +WH MI NG ++ +
Sbjct: 162 QHLHPLTVSTDNRVLEMYFECGSLDDAIDVFKSMPEYDLTTWHTMIMQLVKNGFAEDSID 221
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+F Q + +GL+P+ Q F+ VF AC I E +HFESM ++GI P HY+ LV ++
Sbjct: 222 IFTQFKNMGLKPDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMAHYVSLVEMI 281
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----DPSK 480
GHL EA +FIE K+P EP E W+ L N R+HG+ +L D + + L D K
Sbjct: 282 ASIGHLDEALEFIE-KMPMEPNVEVWKTLMNSCRVHGNTELGDVKAKAGLLLGENSDLIK 340
Query: 481 ADPKKIPTPPPKKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKAL-NQMKESTYVP 534
+ + T PK G+SR+ EFRN P + L+ L QMKE Y+
Sbjct: 341 KNEQNKLTINPK---------GQSRVHEFRNGDTSDPKSDKIYTLLRGLREQMKEDGYIA 391
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
+TRY LHDID+E KE LL HSERLA+A GL S+PAR+ +R+IKN R+C DCH A+KI+S
Sbjct: 392 ETRYALHDIDEEGKEDVLLAHSERLAVAKGLFSSPARSTIRVIKNFRICPDCHTALKIIS 451
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IVGRELI++ KR HHFK+G CSC DY+
Sbjct: 452 KIVGRELIIQ-AKRCHHFKNGLCSCKDYF 479
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 224/386 (58%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +GV+A+ + + + C NP + K++H +++ I DL + N ++ MY KCG
Sbjct: 438 KMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCG 497
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA RV + M+ R + +W+ +I G A NG G E LQ FE M+ ++PN TF+ V S
Sbjct: 498 SVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMS 557
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + +EE F SM+ ++GI P +HY +V +L + GHL EA+ I +PF+P+
Sbjct: 558 ACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVI-LTMPFKPS 616
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R HG++++ + A E + L+P A K
Sbjct: 617 AAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKL 676
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK S ++ + F R +Y + E L Q+K YVPDTR
Sbjct: 677 MKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALT--KQIKSLGYVPDTR 734
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+V+HD+DQE KE+A+ +HSE+LAIAYGLISTP TP+R+ KNLRVC DCH A K +S+I
Sbjct: 735 FVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKIT 794
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE+I RD RFHHFK+G+CSCGDYW
Sbjct: 795 GREIIARDAHRFHHFKNGECSCGDYW 820
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L KG + D+ + L + C K K+VH++ L+ ++ ++ + N ++++Y CGS
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +ARR+FD +++S+ SW++MI+GYA GLG E LF M++ GL+P++ TF+++ SA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
C S A+ +H M E G++ L+ + KCG + +A++ +
Sbjct: 155 CSSPAALNWGREVHVRVM--EAGLANNATVGNALISMYAKCGSVRDARRVFD 204
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G++ D F ++ C +P ++VH +++ + + + N +I MY KCGS+ D
Sbjct: 139 EGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRD 198
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
ARRVFD MA R SW + YA++G E L+ + M + G++P+ T++ V SACGS
Sbjct: 199 ARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGS 258
Query: 391 ADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
A+E+ IH + ++SE L + KCG + +A++ E
Sbjct: 259 LAALEKGKQIHAQIVESEH--HSDVRVSTALTKMYIKCGAVKDAREVFE 305
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 256 LCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L G+++EA ++ + V D + + C P K++H ++ + D
Sbjct: 322 LVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSD 381
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ N +I MY K GSM DAR+VFD M R + SW ++ GYAD G E F++M +
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ 441
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++ N+ T++ V AC + A++ IH E +K+ GI L+ + KCG +
Sbjct: 442 QGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA--GIFADLAVANALMSMYFKCGSV 499
Query: 431 FEAQQFIE 438
+A + E
Sbjct: 500 EDAIRVSE 507
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +GV+ + + CG+ E K++H ++S D+ ++ + +MY KCG+
Sbjct: 237 MLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGA 296
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR VF+ + +R + +W+ MI G D+G +E +F +M K + P+ T+LA+ SA
Sbjct: 297 VKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSA 356
Query: 388 C----GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
C G A E IH ++K G+ L+ + K G + +A+Q + ++P
Sbjct: 357 CARPGGLACGKE---IHARAVKD--GLVSDVRFGNALINMYSKAGSMKDARQVFD-RMPK 410
Query: 444 EPTAEFWEAL 453
W AL
Sbjct: 411 RDVVS-WTAL 419
>gi|297821961|ref|XP_002878863.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324702|gb|EFH55122.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 235/394 (59%), Gaps = 21/394 (5%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
+ + C++GKVK+A+ +D + S L +LCG + + AK VH
Sbjct: 217 IKEFDEFCKQGKVKKALYTIDTLESMNHVVILSRLLRLAKLCGEAEGLQEAKVVHGKISS 276
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
S D+ N+ ++EMY CG +A VF+ M+++++++W+++I +A NG G++ + +
Sbjct: 277 SVSHLDVSSNHVLLEMYSNCGLANEAANVFEKMSEKNLETWYIIIRCFAKNGFGEDAIDM 336
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F + +K G +P+ Q F +F ACG ++E +HFESM ++GI P E Y+ LV +
Sbjct: 337 FARFKKEGNRPDAQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIVPSIEDYVSLVEMYS 396
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
G L EA +F+E ++P EP + WE L N +R+HG+++L D E++ LDP++ + +
Sbjct: 397 LPGFLDEALEFVE-RMPMEPNVDVWETLMNLSRVHGNLELGDRCAEVVELLDPTRLNKQS 455
Query: 486 IPTPPPKKRTAI---------SILDG-KSRLVEFR--NPTLYRDDEKLKALNQMK----E 529
P K + I IL G KS ++ F+ + L +DE + L +K E
Sbjct: 456 REGFLPVKASDIEKEILKKRSGILHGVKSTMLNFKAGDTNLPENDELFQLLRNLKMHMVE 515
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YV DT+ LHDIDQE+KE ALL HSER+A A +++TP R P ++KNLRVC DCHNA
Sbjct: 516 MGYVADTKPALHDIDQESKETALLGHSERIAFARAVLNTPPRKPFTVMKNLRVCVDCHNA 575
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KIM+ IVGRE+I+RD KRFHH K+G CSC DYW
Sbjct: 576 WKIMAVIVGREVIMRDIKRFHHMKNGACSCNDYW 609
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 237/428 (55%), Gaps = 38/428 (8%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLF 284
L + CPA D V S+ + Q G +EA+++ D+ +K DA F +LF
Sbjct: 441 LEDAAKVFEVCPAEDLVAYTSM--ITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLF 498
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C N YE K++H + L+ + D+ N ++ MY KCGS+ DA +F+ ++ R +
Sbjct: 499 NACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIV 558
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW MI G A +G G + LQLF QM K G+ PN T ++V SAC A + EA F M
Sbjct: 559 SWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLM 618
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+ FGI+P EHY +V +LG+ G L EA +++ +PF+ +A W AL ARIH +I+
Sbjct: 619 EKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKE-MPFQASAAVWGALLGAARIHKNIE 677
Query: 465 LEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGK 503
L HA E+++ L+P K+ + + KK +S ++ K
Sbjct: 678 LGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELK 737
Query: 504 SRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
++ F R+ +Y + L+ ++ + YVP LHD++Q KEQ L +H
Sbjct: 738 DKVYTFIVGDRSHPRSKEIYVKLDDLR--ERLTSAGYVPMIETDLHDVEQIEKEQLLWHH 795
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LA+A+GLI+TP P+R+ KNLRVC DCH A K +S++ RE+IVRD RFHHF+DG
Sbjct: 796 SEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDG 855
Query: 616 KCSCGDYW 623
CSCGDYW
Sbjct: 856 SCSCGDYW 863
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 265 AIELMDK-GVKADASCFYTL---FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
A++L+ K G A +TL + C + +++H ++ + D + +I+
Sbjct: 273 ALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLID 332
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG + DAR VFD M + + W+ +I+GY++ G E + LF M K GL+ N+ T
Sbjct: 333 MYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTT 392
Query: 381 FLAVF-SACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ S GS A+ E +H S+KS + + L+ GKC L +A + E
Sbjct: 393 LSTILKSTAGSQANGFCEQ-VHTISIKSGYQYDGYVAN--SLLDSYGKCCLLEDAAKVFE 449
Query: 439 QKLPFEPTAEFWEALRNYAR 458
P E + + Y++
Sbjct: 450 V-CPAEDLVAYTSMITAYSQ 468
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++VH ++S + D + N +++ YGKC + DA +VF+ + ++ MI Y+
Sbjct: 409 CEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQ 468
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
GLG+E L+++ +M+ ++P+ F ++F+AC + A E+ IH +K G+
Sbjct: 469 YGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC--GLLSDV 526
Query: 415 EHYLGLVGVLGKCGHLFEAQ 434
LV + KCG + +A
Sbjct: 527 FAGNSLVNMYAKCGSIDDAS 546
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ +Y KC AR++ ++ + SW +I+GY NG G+E L + +M LG + NE
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEF---GISPGTEHYLGLVGVLGKCGHL 430
TF +V C +E IH ++ +E GISP L VL C L
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNE---FSLSTVLNACAGL 201
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 4/205 (1%)
Query: 261 KVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
+V E++ G+ + T+ C + KVH Y ++ D N +++
Sbjct: 172 RVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K G A VF + + SW+ +I G + D L+L +M + P+ T
Sbjct: 232 MYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFT 291
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ AC + ++ +H MK + + P + +GL+ + KCG L +A+ +
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALMKMD--MEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 440 KLPFEPTAEFWEALRNYARIHGDID 464
+P + + + Y+ DI+
Sbjct: 350 -MPXKDVIVWNSIISGYSNCGYDIE 373
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 225/395 (56%), Gaps = 39/395 (9%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EAI L + G+K D F ++ C +P + + K++H + + D+ L + ++
Sbjct: 333 EAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALV 392
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY-ADNGLGDEGLQLFEQMRKLGLQPNE 378
MY KCGSM DA VF+ M++R++ +W +I G A +G E L+ F+QM+K G++P++
Sbjct: 393 SMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDK 452
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF +V SAC +EE HF SM ++GI P EHY V +LG+ GHL EA+ I
Sbjct: 453 VTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVI- 511
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------A 481
+PF P W AL + R+H D++ + A E ++ LDP
Sbjct: 512 LSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYE 571
Query: 482 DPKKIPTPPPKKRTA-------ISILDGKSRLVEFRNPT------LYRDDEKLKALNQMK 528
D +K+ K+ I + DGK + + + +Y + KL Q+K
Sbjct: 572 DAEKVRQVMEKRDVVKEPGQSWIEV-DGKVHVFHVEDKSHPESEQIYVELGKLT--EQIK 628
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E YVPDTR+VLHD+D+E KE+ L HSERLAI YGL+ TP P+RI+KNLRVCGDCH
Sbjct: 629 EMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHT 688
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +S++VGRE+I RD +RFHHF DG CSCGD+W
Sbjct: 689 ATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 137/258 (53%), Gaps = 24/258 (9%)
Query: 252 DLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
D++ LC+ G++KEA+ +M+ +G + + F L + C + E ++VH L+S
Sbjct: 18 DVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSG 77
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
I+ + L N ++ MY KCGS+TDARRVFD + DR++ SW MI + E + +E
Sbjct: 78 IQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVGVL 424
M+ G +P++ TF+++ +A + + ++ +H E +++ + P GT LVG+
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTS----LVGMY 193
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
KCG + +A + I +LP + + + YA+ G +D+ A EL+ + ++ P
Sbjct: 194 AKCGDISKA-RVIFDRLPEKNVVTWTLLIAGYAQ-QGQVDV---ALELLETMQQAEVAPN 248
Query: 485 KIPTPPPKKRTAISILDG 502
KI T SIL G
Sbjct: 249 KI--------TFASILQG 258
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 108/194 (55%), Gaps = 11/194 (5%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q+G+V A+EL++ +A+ + F ++ + C P E+ KKVH Y +QS
Sbjct: 221 IAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGY 280
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+L + N +I MY KCG + +AR++F + R + +W M+ GYA G DE + LF +
Sbjct: 281 GRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRR 340
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL--GLVGVLG 425
M++ G++P++ TF +V ++C S ++E IH + + + + + + YL LV +
Sbjct: 341 MQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL----DVYLQSALVSMYA 396
Query: 426 KCGHLFEAQQFIEQ 439
KCG + +A Q
Sbjct: 397 KCGSMDDASLVFNQ 410
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G K D F +L NP+ + +KVH +++ + + + ++ MY KCG ++ A
Sbjct: 143 GCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKA 202
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R +FD + ++++ +W L+I GYA G D L+L E M++ + PN+ TF ++ C +
Sbjct: 203 RVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTP 262
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A+E +H ++S +G + L+ + KCG L EA++ LP +
Sbjct: 263 AALEHGKKVHRYIIQSGYGRELWVVN--SLITMYCKCGGLEEARKLFSD-LPHRDVVTWT 319
Query: 451 EALRNYARI 459
+ YA++
Sbjct: 320 AMVTGYAQL 328
>gi|51969930|dbj|BAD43657.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 615
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 231/390 (59%), Gaps = 25/390 (6%)
Query: 256 LCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C+ GKVK+A+ +D D S L ++CG + + AK VH S D
Sbjct: 229 FCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLD 288
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L N+ ++EMY CG +A VF+ M+++++++W ++I +A NG G++ + +F + ++
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G P+ Q F +F ACG ++E +HFESM ++GI+P E Y+ LV + G L
Sbjct: 349 EGDIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLD 408
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK----IP 487
EA +F+E ++P EP + WE L N +R+HG+++L D+ E++ LDP++ + + IP
Sbjct: 409 EALEFVE-RMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 467
Query: 488 TPPP-------KKRTAISILDG-KSRLVEFR--NPTLYRDDEKLKALNQMK----ESTYV 533
KKR+ I L G KS + EFR + L +DE + L +K E YV
Sbjct: 468 VKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYV 525
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
+TR LHDIDQE+KE LL HSER+A A ++++ R P +IKNLRVC DCHNA+KIM
Sbjct: 526 AETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIM 585
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S IVGRE+I RD KRFH K+G C+C DYW
Sbjct: 586 SDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>gi|79563130|ref|NP_180129.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546773|sp|Q680H3.2|PP170_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g25580
gi|330252626|gb|AEC07720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 615
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 231/390 (59%), Gaps = 25/390 (6%)
Query: 256 LCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C+ GKVK+A+ +D D S L ++CG + + AK VH S D
Sbjct: 229 FCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLD 288
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L N+ ++EMY CG +A VF+ M+++++++W ++I +A NG G++ + +F + ++
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G P+ Q F +F ACG ++E +HFESM ++GI+P E Y+ LV + G L
Sbjct: 349 EGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLD 408
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK----IP 487
EA +F+E ++P EP + WE L N +R+HG+++L D+ E++ LDP++ + + IP
Sbjct: 409 EALEFVE-RMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 467
Query: 488 TPPP-------KKRTAISILDG-KSRLVEFR--NPTLYRDDEKLKALNQMK----ESTYV 533
KKR+ I L G KS + EFR + L +DE + L +K E YV
Sbjct: 468 VKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYV 525
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
+TR LHDIDQE+KE LL HSER+A A ++++ R P +IKNLRVC DCHNA+KIM
Sbjct: 526 AETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIM 585
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S IVGRE+I RD KRFH K+G C+C DYW
Sbjct: 586 SDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>gi|4874299|gb|AAD31361.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 567
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 231/390 (59%), Gaps = 25/390 (6%)
Query: 256 LCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C+ GKVK+A+ +D D S L ++CG + + AK VH S D
Sbjct: 181 FCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLD 240
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L N+ ++EMY CG +A VF+ M+++++++W ++I +A NG G++ + +F + ++
Sbjct: 241 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 300
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G P+ Q F +F ACG ++E +HFESM ++GI+P E Y+ LV + G L
Sbjct: 301 EGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLD 360
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK----IP 487
EA +F+E ++P EP + WE L N +R+HG+++L D+ E++ LDP++ + + IP
Sbjct: 361 EALEFVE-RMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 419
Query: 488 TPPP-------KKRTAISILDG-KSRLVEFR--NPTLYRDDEKLKALNQMK----ESTYV 533
KKR+ I L G KS + EFR + L +DE + L +K E YV
Sbjct: 420 VKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYV 477
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
+TR LHDIDQE+KE LL HSER+A A ++++ R P +IKNLRVC DCHNA+KIM
Sbjct: 478 AETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIM 537
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S IVGRE+I RD KRFH K+G C+C DYW
Sbjct: 538 SDIVGREVITRDIKRFHQMKNGACTCKDYW 567
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 221/386 (57%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +GVKA+ + + + C NP + K++H +++ + DL + N ++ MY KCG
Sbjct: 422 QMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCG 481
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA RVF+ M+ R + +W+ +I G NG G E LQ +E M+ G++PN TF+ V S
Sbjct: 482 SVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLS 541
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + +EE F M ++GI P +HY +V +L + GHL EA+ I +P +P+
Sbjct: 542 ACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVI-LTIPLKPS 600
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKK 485
A W AL RIH ++++ + A E + L+P A K
Sbjct: 601 AAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKF 660
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK S ++ + F R +Y + E LK QMK YVPDTR
Sbjct: 661 MKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLK--KQMKSLGYVPDTR 718
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+V+HD+D E KE+A+ +HSE+LAIAYGLISTP TP+RI KNLRVC DCH A K +S+I
Sbjct: 719 FVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKIT 778
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I RD RFHHFK+G+CSCGDYW
Sbjct: 779 KREIIARDAHRFHHFKNGECSCGDYW 804
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F ++ C +P +++H +++ + D + N +I MY KCGS+ DARRVF
Sbjct: 128 DKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVF 187
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
D MA R SW + YA++G G+E L+ + M + ++P+ T++ V SACGS A+E
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247
Query: 396 EAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ IH ++SE+ L + KCG +A++ E
Sbjct: 248 KGKQIHAHIVESEY--HSDVRVSTALTKMYMKCGAFKDAREVFE 289
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L KG + D+ + L + C K K+VH++ L+ ++ ++ + N ++++Y CGS
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +AR++FD +++S+ SW++MI+GYA GL E LF M++ L+P++ TF+++ SA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
C S + IH M E G++ T L+ + KCG + +A++ +
Sbjct: 139 CSSPAVLNWGREIHVRVM--EAGLANDTTVGNALISMYAKCGSVRDARRVFD 188
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++++GV D + + T+ C P K++H + + D+ N +I MY K GS
Sbjct: 322 MLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGS 381
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M DAR+VFD M R + SW ++ YAD E F+QM + G++ N+ T++ V A
Sbjct: 382 MKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKA 441
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
C + A++ IH E +K+ G+ L+ + KCG + +A + E
Sbjct: 442 CSNPVALKWGKEIHAEVVKA--GLLADLAVTNALMSMYFKCGSVEDAIRVFE 491
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ + CG+ E K++H + ++S D+ ++ + +MY KCG+ DAR VF+ ++
Sbjct: 233 YMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLS 292
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
R + +W+ MI G+ D+G +E F +M + G+ P+ T+ V SAC +
Sbjct: 293 YRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKE 352
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
IH + K G+ L+ + K G + +A+Q + ++P + L YA
Sbjct: 353 IHARAAKD--GLVSDVRFGNALINMYSKAGSMKDARQVFD-RMPKRDVVSWTTLLGRYA 408
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 221/397 (55%), Gaps = 42/397 (10%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L D+ G+K D + + C N E AK++H L+ D L N +
Sbjct: 630 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNAL 689
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ Y KCGS +DA VFD M R++ SW+ +I G A +G G + LQLFE+M+ G++P+
Sbjct: 690 VSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDI 749
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+++ SAC A +EE +F SM +FGI+P EHY +V +LG+ G L E + I
Sbjct: 750 VTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALI- 808
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAIS 498
+ +PF+ W AL RIHG++ + + A E + LDP D + A
Sbjct: 809 KTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDP---DNAAVYVALSHMYAAAG 865
Query: 499 ILDGKSRL---VEFRNPT-----------------------------LYRDDEKLKALNQ 526
+ D ++L +E R T +Y + +KL +
Sbjct: 866 MWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLT--HA 923
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
MK YVPDTR V+HD+D+ KE A+ +HSERLAIAYGLIST TP+RI KNLRVC DC
Sbjct: 924 MKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDC 983
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K +++IV RE++ RD RFHHFKDG CSCGDYW
Sbjct: 984 HTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 9/216 (4%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L + G EA+ ++ G+K + + ++ C +P + +++H +++
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA 576
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D + N ++ MY CGS+ DAR+VFD M R + +++ MI GYA + LG E L+LF
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLF 636
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
+++++ GL+P++ T++ + +AC ++ ++E A IH +K G T LV
Sbjct: 637 DRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD--GYLSDTSLGNALVSTYA 694
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG +A ++ + + W A+ HG
Sbjct: 695 KCGSFSDALLVFDKMMKRNVIS--WNAIIGGCAQHG 728
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Query: 256 LCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L + G +EA E+ +G+ + + L C NP +++H ++ D
Sbjct: 421 LAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFD 480
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + N +I MY +CGS+ DAR +F+ M + + SW MI G A +GLG E L +F+ M++
Sbjct: 481 ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQ 540
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
GL+PN T+ ++ +AC S A++ IH + + E G++ LV + CG +
Sbjct: 541 AGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI--EAGLATDAHVANTLVNMYSMCGSV 598
Query: 431 FEAQQFIEQ 439
+A+Q ++
Sbjct: 599 KDARQVFDR 607
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G ++EA++L+ + G+ + L C +P E +++H +++ + D+
Sbjct: 221 QYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVN 280
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ MY KCGS+ +AR VFD M +S+ SW ++I GYAD G + ++F++M++ G
Sbjct: 281 VANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG 340
Query: 374 LQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ PN T++ V +A A+ + H + E ++ GT LV + KCG
Sbjct: 341 VVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGT----ALVKMYAKCGSY 396
Query: 431 FEAQQFIEQ 439
+ +Q E+
Sbjct: 397 KDCRQVFEK 405
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
KW K VH + L + DL + +++MY KCGS D R+VF+ + +R + +W+ MI
Sbjct: 362 KW---GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 418
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG 409
G A+ G +E +++ QM++ G+ PN+ T++ + +AC + A+ IH +K F
Sbjct: 419 GGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHA 469
++ L+ + +CG + +A+ + + + + W A+ I G A
Sbjct: 479 FDISVQN--ALISMYARCGSIKDARLLFNKMVRKDIIS--WTAM-----IGGLAKSGLGA 529
Query: 470 EELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
E L V D +A K P + T SIL+ S
Sbjct: 530 EALAVFQDMQQAGLK------PNRVTYTSILNACS 558
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L +G + ++ + + + C K ++VH++ +Q D N +I MY +CGS
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 328 MTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ +AR+V++ + +R++ SW+ M+ GY G +E L+L +M++ GL T + +
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
S+C S A+E IH E+MK+ + ++ + KCG + EA++ + K+ +
Sbjct: 252 SSCKSPSALECGREIHVEAMKARLLFDVNVANC--ILNMYAKCGSIHEAREVFD-KMETK 308
Query: 445 PTAEFWEALRNYARI-HGDIDLE 466
+ + YA H +I E
Sbjct: 309 SVVSWTIIIGGYADCGHSEIAFE 331
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 234/417 (56%), Gaps = 38/417 (9%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYEN 295
P D VL S+ + Q+G+ +EA+ E+ D+G+K D+ +L C + YE
Sbjct: 375 PIVDLVLFTSL--VTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQ 432
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K+VH + L+ D+ N ++ MY KCGS+ DA F + R + SW MI G A
Sbjct: 433 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ 492
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G E LQLF+QM K+G+ PN T ++V AC A + EA +F SMK FGI P E
Sbjct: 493 HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQE 552
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY ++ +LG+ G L A + + K+PF+ A W AL ARIH +IDL + A E+++
Sbjct: 553 HYACMIDLLGRAGKLEAAMELV-NKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLA 611
Query: 476 LDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF----- 509
L+P K+ + + KK +S L+ K ++ F
Sbjct: 612 LEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDR 671
Query: 510 ---RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
R+ +Y ++L L +K++ YVP LHD+++ KEQ L +HSE+LA+A+GLI
Sbjct: 672 SHSRSTEIYAKLDELSDL--LKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLI 729
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+TP P+R+ KNLR+C DCH +K +S+IV RE+IVRD RFHHF++G CSCG+YW
Sbjct: 730 ATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 8/226 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+K + F ++ + C K K+VH + + D + N ++ +Y KCG DA
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GS 390
R +FD + DRS+ SW+ + + Y + + E + LF M G++PNE + ++ + C G
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
D+++ IH +K G LV + K G L +A ++ +P W
Sbjct: 125 EDSVQGRKIHGYLIK--LGYDSDAFSANALVDMYAKVGILEDASSVFDE--IAKPDIVSW 180
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA 496
A+ +H + A EL+ +++ S P K A
Sbjct: 181 NAIIAGCVLH---EYHHRALELLREMNKSGMCPNMFTLSSALKACA 223
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C E +++H ++ + D L +I+MY KC SM DAR VF M +R M +W
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF----IHFE 402
+ +I+G++ N +E LF M G+ N+ T V S A++ + IH
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLK---SIAALQANYMCRQIHAL 338
Query: 403 SMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
S+KS F ++Y+ L+ GKCGH+ +A + E+ P F + YA+
Sbjct: 339 SLKSGFEF----DNYVVNSLIDTYGKCGHVEDATRVFEES-PIVDLVLFTSLVTAYAQ 391
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H L+S D + N +I+ YGKCG + DA RVF+ + + ++ YA
Sbjct: 332 CRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQ 391
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
+G G+E L+L+ +M+ G++P+ ++ +AC S A E+ +H +K FG
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK--FGFMSDI 449
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG + +A ++P W A+ HG
Sbjct: 450 FAGNSLVNMYAKCGSIEDASCAF-SRIPVRGIVS-WSAMIGGLAQHG 494
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ G++ + ++ +C + +K+H Y ++ D N +++MY K G
Sbjct: 101 DMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVG 160
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA VFD +A + SW+ +I G + L+L +M K G+ PN T +
Sbjct: 161 ILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALK 220
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQ 434
AC A+ E S S + G++ +L GL+ + KC + +A+
Sbjct: 221 ACAGM-ALRELGRQLHS--SLIKMDMGSDSFLGVGLIDMYSKCNSMDDAR 267
>gi|297802776|ref|XP_002869272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315108|gb|EFH45531.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 468
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 234/392 (59%), Gaps = 20/392 (5%)
Query: 249 SVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
S+ +L +C+EGKVKEA++++ ++G D + +LCG+ + + AK VH++
Sbjct: 80 SLDELDAICREGKVKEAVDIIKSWRNEGYVVDLLRLLWIAQLCGDAQALQEAKVVHEFIT 139
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
S D+ N +I+MY CGS DA VF+ M +R++++W +I +A NG G++ +
Sbjct: 140 SSVGTSDISAYNSIIQMYSGCGSAEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAID 199
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+F + ++ G +P+ + F +F ACG + E +HFESM E+GI P EHY+ LV +L
Sbjct: 200 IFSRFKEEGNRPDGEIFKDIFFACGVLGDMNEGLLHFESMVKEYGIFPSVEHYVSLVKML 259
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
+ G+L EA +F+E EP + WE L N +R+HGD L D ++++ LD S+ + +
Sbjct: 260 AEPGYLDEALRFVE---SMEPNVDLWETLMNLSRVHGDFILGDRCQDMVEQLDASRLNKE 316
Query: 485 KIPTPPPKKRTAI------SILDG---KSRLVEFRNPTLYRDDEKLKALNQMKEST---- 531
P K + + + G SR + + + + E AL +KE
Sbjct: 317 SRAGLVPVKSSDLVKEKLQRMAKGPKYGSRHMAAGDISRPENREFYMALKSLKEHMIEIG 376
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVP+++ LHD+D+E+K++ L H+ER A + TPAR+ ++++KN+RVC DCHNA+K
Sbjct: 377 YVPESKLALHDVDKESKDENLFNHNERFAFIRTFLDTPARSTIQVVKNIRVCVDCHNALK 436
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+MS+IVGRELI RD KR+HH KDG CSC DYW
Sbjct: 437 LMSKIVGRELISRDAKRYHHMKDGVCSCRDYW 468
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 242/428 (56%), Gaps = 39/428 (9%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLF 284
L + N N P D V ++ +A Q GK + A + + + G+K D F L
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTI--IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C +P+ +++H ++ D+++ +I MY KCGS+ DA +VF + +++
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW MI GYA +G G E L+LF QM++ G++P+ TF+ SAC A IEE HF+SM
Sbjct: 683 SWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM 742
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
K EF I P EHY +V + G+ G L EA +FI K+ EP + W AL ++H +++
Sbjct: 743 K-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFI-IKMQVEPDSRVWGALLGACQVHLNVE 800
Query: 465 LEDHAEELMVDLDPSKADPKKIPT----------PPPKKRTAISILD-------GKSRL- 506
L + A + ++LDP+ I + K R +LD G+S +
Sbjct: 801 LAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV--MLDRGVVKKPGQSWIE 858
Query: 507 VEFRNPTLYRDDE----------KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
V+ + T Y DD+ +L+ L+ +M++ YVPDTRYVLHD++ KEQAL YH
Sbjct: 859 VDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYH 918
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SERLAI YGL+ TP TP+ I KNLRVCGDCH A K +S+I R++I RD+ RFHHFKDG
Sbjct: 919 SERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDG 978
Query: 616 KCSCGDYW 623
CSCGD+W
Sbjct: 979 VCSCGDFW 986
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 223 HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADAS 278
H + + + P D V S+ + L + G+ K+A L ++GV+ D
Sbjct: 256 HIKCGDIGDATKVFDNLPTRDLVTWTSM--ITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
F +L C +P+ E KKVH + ++ + ++ MY KCGSM DA VFD +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
R++ SW MI G+A +G DE F +M + G++PN TF+++ AC S A++
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG- 432
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ E G L+ + KCG L +A + E+
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G++ EA ++++ G++ + F ++ C +P + +++ D+ +++
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + ++ MY KCGS+ DA RVF+ ++ +++ +W+ MI Y + D L F
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+ + K G++PN TF ++ + C S+D++E ++HF MK+ G+ LV +
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFV 560
Query: 426 KCGHLFEAQQFI 437
CG L A+
Sbjct: 561 NCGDLMSAKNLF 572
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 133/258 (51%), Gaps = 25/258 (9%)
Query: 221 PGHQIPNQLNNVPNNMN-QCPAGDQVLPPSVAD-------LARLCQEGKVKEAIELMDKG 272
P H+ L + + + +CP G V+ + D L RL + G+ EA++++++
Sbjct: 42 PTHEGIETLRMLTTSFSGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVLER- 100
Query: 273 VKADAS-------CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
D+S + L +LC K + ++++++ +S ++ D+ + N +I MY KC
Sbjct: 101 --VDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKC 158
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G+ A+++FD M ++ + SW+L++ GY +GL +E +L EQM + ++P+++TF+++
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPF 443
+AC A +++ E T+ ++G L+ + KCG + +A + + LP
Sbjct: 219 NACADARNVDKG---RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN-LPT 274
Query: 444 EPTAEFWEALRNYARIHG 461
+ + AR HG
Sbjct: 275 RDLVTWTSMITGLAR-HG 291
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ +G+K ++S F ++ +C + E K VH +++ + DL ++N ++ M+ CG
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A+ +F+ M R + SW+ +I G+ +G F+ M++ G++P++ TF + +A
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C S +A+ E ++ +E GL+ + KCG + +A Q + KLP +
Sbjct: 625 CASPEALTEGR-RLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQ-VFHKLPKKNVY 682
Query: 448 EFWEALRNYARIHG 461
+ + YA+ HG
Sbjct: 683 SWTSMITGYAQ-HG 695
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L Q G +EA +L ++ VK D F ++ C + + + +++++ L++
Sbjct: 183 LGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL + +I M+ KCG + DA +VFD++ R + +W MI G A +G + LF++
Sbjct: 243 DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGK 426
M + G+QP++ F+++ AC +A+E+ MK + TE Y+G ++ + K
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE---VGWDTEIYVGTAILSMYTK 359
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
CG + +A + + L W A+ HG ID
Sbjct: 360 CGSMEDALEVFD--LVKGRNVVSWTAMIAGFAQHGRID 395
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 242/428 (56%), Gaps = 39/428 (9%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLF 284
L + N N P D V ++ +A Q GK + A + + + G+K D F L
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTI--IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C +P+ +++H ++ D+++ +I MY KCGS+ DA +VF + +++
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW MI GYA +G G E L+LF QM++ G++P+ TF+ SAC A IEE HF+SM
Sbjct: 683 SWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM 742
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
K EF I P EHY +V + G+ G L EA +FI K+ EP + W AL ++H +++
Sbjct: 743 K-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFI-IKMQVEPDSRVWGALLGACQVHLNVE 800
Query: 465 LEDHAEELMVDLDPSKADPKKIPT----------PPPKKRTAISILD-------GKSRL- 506
L + A + ++LDP+ I + K R +LD G+S +
Sbjct: 801 LAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV--MLDRGVVKKPGQSWIE 858
Query: 507 VEFRNPTLYRDDE----------KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
V+ + T Y DD+ +L+ L+ +M++ YVPDTRYVLHD++ KEQAL YH
Sbjct: 859 VDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYH 918
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SERLAI YGL+ TP TP+ I KNLRVCGDCH A K +S+I R++I RD+ RFHHFKDG
Sbjct: 919 SERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDG 978
Query: 616 KCSCGDYW 623
CSCGD+W
Sbjct: 979 VCSCGDFW 986
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 223 HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADAS 278
H + + + P D V S+ + L + G+ K+A L ++GV+ D
Sbjct: 256 HIKCGDIGDATKVFDNLPTRDLVTWTSM--ITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
F +L C +P+ E KKVH + ++ + ++ MY KCGSM DA VFD +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
R++ SW MI G+A +G DE F +M + G++PN TF+++ AC S A++
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG- 432
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ E G L+ + KCG L +A + E+
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G++ EA ++++ G++ + F ++ C +P + +++ D+ +++
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + ++ MY KCGS+ DA RVF+ ++ +++ +W+ MI Y + D L F
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+ + K G++PN TF ++ + C S+D++E ++HF MK+ G+ LV +
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFV 560
Query: 426 KCGHLFEAQQFI 437
CG L A+
Sbjct: 561 NCGDLMSAKNLF 572
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 133/258 (51%), Gaps = 25/258 (9%)
Query: 221 PGHQIPNQLNNVPNNMN-QCPAGDQVLPPSVAD-------LARLCQEGKVKEAIELMDKG 272
P H+ L + + + +CP G V+ + D L RL + G+ EA++++++
Sbjct: 42 PTHEGIETLRMLTTSFSGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVLER- 100
Query: 273 VKADAS-------CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
D+S + L +LC K + ++++++ +S ++ D+ + N +I MY KC
Sbjct: 101 --VDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKC 158
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G+ A+++FD M ++ + SW+L++ GY +GL +E +L EQM + ++P+++TF+++
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPF 443
+AC A +++ E T+ ++G L+ + KCG + +A + + LP
Sbjct: 219 NACADARNVDKG---RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN-LPT 274
Query: 444 EPTAEFWEALRNYARIHG 461
+ + AR HG
Sbjct: 275 RDLVTWTSMITGLAR-HG 291
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ +G+K ++S F ++ +C + E K VH +++ + DL ++N ++ M+ CG
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A+ +F+ M R + SW+ +I G+ +G F+ M++ G++P++ TF + +A
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C S +A+ E ++ +E GL+ + KCG + +A Q + KLP +
Sbjct: 625 CASPEALTEGR-RLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQ-VFHKLPKKNVY 682
Query: 448 EFWEALRNYARIHG 461
+ + YA+ HG
Sbjct: 683 SWTSMIAGYAQ-HG 695
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L Q G +EA +L ++ VK D F ++ C + + + +++++ L++
Sbjct: 183 LGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL + +I M+ KCG + DA +VFD++ R + +W MI G A +G + LF++
Sbjct: 243 DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGK 426
M + G+QP++ F+++ AC +A+E+ MK + TE Y+G ++ + K
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE---VGWDTEIYVGTAILSMYTK 359
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
CG + +A + + L W A+ HG ID
Sbjct: 360 CGSMEDALEVFD--LVKGRNVVSWTAMIAGFAQHGRID 395
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 218/368 (59%), Gaps = 28/368 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ C + E K+VH ++ D+ ++N +++MYGKCG + DA+ VF + +
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ SW+ MI+G A +G G E + LFEQM + G++PN+ TF+ V S C A ++E +F+
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
SM + GISP EHY +V + G+ G L EA FI Q +P EP A W +L R+HG+
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQ-MPVEPNASVWGSLLGACRVHGN 182
Query: 463 IDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILD 501
I+L + A E +++L P K + KK S ++
Sbjct: 183 IELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIE 242
Query: 502 GKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
++++ F +P + E L+ L QMK + Y+P+T +VLHD+++E KE L +H
Sbjct: 243 VQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHH 302
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LAIA+G+ISTP T +R++KNLRVCGDCH A K +SRIV RE+++RD RFHHFKDG
Sbjct: 303 SEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDG 362
Query: 616 KCSCGDYW 623
+CSCGDYW
Sbjct: 363 QCSCGDYW 370
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 228/417 (54%), Gaps = 34/417 (8%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWY 293
+C GD V S+ + Q G+ +EA++L D +K D +L C N +
Sbjct: 493 ECTIGDLVSFTSM--ITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 550
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K++H + L+ D+ N ++ MY KCGS+ DA R F + +R + SW MI G
Sbjct: 551 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 610
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A +G G + LQLF QM K G+ PN T ++V AC A + EA ++FESM+ FG P
Sbjct: 611 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 670
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY ++ +LG+ G + EA + + K+PFE A W AL ARIH D++L A E++
Sbjct: 671 QEHYACMIDLLGRAGKINEAVELV-NKMPFEANASVWGALLGAARIHKDVELGRRAAEML 729
Query: 474 VDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEFR-- 510
L+P K+ + + KK +S ++ K ++ F
Sbjct: 730 FILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVG 789
Query: 511 NPTLYRDDEKLKALNQ----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ + YR E L++ M ++ YVP LHD++Q KE L +HSE+LA+A+GLI
Sbjct: 790 DRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLI 849
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+TP P+R+ KNLRVC DCH A K + +IV RE+IVRD RFHHFKDG CSCGDYW
Sbjct: 850 ATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVK + F ++ + C K K+VH + S GD+ + N ++ MY KC D+
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GS 390
+R+FD + +R++ SW+ + + Y E + LF +M G++PNE + ++ +AC G
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
D+ IH +K + P + + LV + K G L +A E+ +P W
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEK--IKQPDIVSW 327
Query: 451 EALRNYARIH 460
A+ +H
Sbjct: 328 NAVIAGCVLH 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 247 PPSVADLARLCQEGKVKEAIELMDKGVKADASCFYT-LFELCGNPKWYENAKKVHDYFLQ 305
P + + + ++ + + L+DKG S Y+ L C K ++H + +
Sbjct: 25 PKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITK 84
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
S + D + N +I +Y KC AR++ D ++ + SW +I+GYA NGLG L
Sbjct: 85 SGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMA 144
Query: 366 FEQMRKLGLQPNEQTFLAVFSAC 388
F +M LG++ NE TF +V AC
Sbjct: 145 FHEMHLLGVKCNEFTFSSVLKAC 167
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+ +G+ + + T+ + + ++VH ++S D+ + N +I+ YGKC
Sbjct: 422 VEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKC 481
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ DA R+F+ + S+ MI YA G G+E L+LF +M+ + L+P+ ++
Sbjct: 482 SHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 541
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+AC + A E+ +H +K F + + LV + KCG + +A
Sbjct: 542 NACANLSAFEQGKQLHVHILKYGFVLDIFAGN--SLVNMYAKCGSIDDA 588
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENA--------KKVHDYFLQSTIRGD 311
G + +AI + +K + D + + C + +E A +++H ++ + D
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESD 366
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L ++ +++MY KC + DAR F+ + ++ + +W+ +I+GY+ E L LF +M K
Sbjct: 367 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 426
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCG 428
G+ N+ T + + + +H S+KS F ++ Y+ L+ GKC
Sbjct: 427 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF----HSDIYVVNSLIDSYGKCS 482
Query: 429 HLFEAQQFIEQ 439
H+ +A++ E+
Sbjct: 483 HVEDAERIFEE 493
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G+K + ++ C + K +H Y ++ D N +++MY K G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ DA VF+ + + SW+ +I G + ++ L+L QM++
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 228/417 (54%), Gaps = 34/417 (8%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWY 293
+C GD V S+ + Q G+ +EA++L D +K D +L C N +
Sbjct: 520 ECTIGDLVSFTSM--ITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K++H + L+ D+ N ++ MY KCGS+ DA R F + +R + SW MI G
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 637
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A +G G + LQLF QM K G+ PN T ++V AC A + EA ++FESM+ FG P
Sbjct: 638 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 697
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY ++ +LG+ G + EA + + K+PFE A W AL ARIH D++L A E++
Sbjct: 698 QEHYACMIDLLGRAGKINEAVELV-NKMPFEANASVWGALLGAARIHKDVELGRRAAEML 756
Query: 474 VDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEFR-- 510
L+P K+ + + KK +S ++ K ++ F
Sbjct: 757 FILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVG 816
Query: 511 NPTLYRDDEKLKALNQ----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ + YR E L++ M ++ YVP LHD++Q KE L +HSE+LA+A+GLI
Sbjct: 817 DRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLI 876
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+TP P+R+ KNLRVC DCH A K + +IV RE+IVRD RFHHFKDG CSCGDYW
Sbjct: 877 ATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 8/226 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVK + F ++ + C K K+VH + S GD+ + N ++ MY KC D+
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GS 390
+R+FD + +R++ SW+ + + Y E + LF +M G++PNE + ++ +AC G
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
D+ IH +K + P + + LV + K G L +A E+ +P W
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEK--IKQPDIVSW 327
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA 496
A+ +H + + A EL+ + S P K A
Sbjct: 328 NAVIAGCVLH---EHHEQALELLGQMKRSGICPNIFTLSSALKACA 370
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 247 PPSVADLARLCQEGKVKEAIELMDKGVKADASCFYT-LFELCGNPKWYENAKKVHDYFLQ 305
P + + + Q+ + + L+DKG S Y+ L C K ++H + +
Sbjct: 25 PKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITK 84
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
S + D + N +I +Y KC + AR++ D ++ + SW +I+GYA NGLG L
Sbjct: 85 SGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMA 144
Query: 366 FEQMRKLGLQPNEQTFLAVFSAC 388
F +M LG++ NE TF +V AC
Sbjct: 145 FHEMHLLGVKCNEFTFSSVLKAC 167
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+ +G+ + + T+ + + ++VH ++S D+ + N +I+ YGKC
Sbjct: 449 VEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKC 508
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ DA R+F+ + S+ MI YA G G+E L+LF +M+ + L+P+ ++
Sbjct: 509 SHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 568
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+AC + A E+ +H +K F + + LV + KCG + +A
Sbjct: 569 NACANLSAFEQGKQLHVHILKYGFVLDIFAGN--SLVNMYAKCGSIDDA 615
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 263 KEAIELMDKGVKADASC--FYTL---FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
++A+EL+ + +K C +TL + C E +++H ++ + DL ++
Sbjct: 341 EQALELLGQ-MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG 399
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++MY KC + DAR F+ + ++ + +W+ +I+GY+ E L LF +M K G+ N
Sbjct: 400 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 459
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQ 434
+ T + + + +H S+KS F ++ Y+ L+ GKC H+ +A+
Sbjct: 460 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF----HSDIYVVNSLIDSYGKCSHVEDAE 515
Query: 435 QFIEQ 439
+ E+
Sbjct: 516 RIFEE 520
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 13/206 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G+K + ++ C + K +H Y ++ D N +++MY K G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA VF+ + + SW+ +I G + ++ L+L QM++ G+ PN T +
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALK 367
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ---------FI 437
AC ++E S + + +GLV + KC L +A+ I
Sbjct: 368 ACAGM-GLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 426
Query: 438 EQKLPFEPTAEFW---EALRNYARIH 460
+++W EAL + +H
Sbjct: 427 AWNAIISGYSQYWEDMEALSLFVEMH 452
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 225/395 (56%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +EA+E L + + D F ++ C + K +H ++ + D+++
Sbjct: 294 GRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVK 353
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N + MY KCGSM +ARR+FD M RS SW+ M+ YA +G +E L+L +M + G++
Sbjct: 354 NALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVK 413
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N TF++V S+C A I E +F S+ + GI TEHY LV +LG+ G L EA++
Sbjct: 414 LNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 473
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------ 483
+I K+P EP W +L R+H D+D A +++LDP +
Sbjct: 474 YI-SKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERG 532
Query: 484 ---------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMK 528
+ + + KK IS + K+++ EFR +P +K++ L M+
Sbjct: 533 DWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMR 592
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E+ YVPDT+ VLHD+D+E KE L YHSE+LAIA+GLISTP ++ L I KNLRVC DCH
Sbjct: 593 EAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHT 652
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +S+I GRE++VRDN RFHHF+DG CSC DYW
Sbjct: 653 ATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G + D F ++ + C NP+ ++ K V + +++ DL + +I MY +C S +
Sbjct: 105 EGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEN 164
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +VF M +++ +W +I +AD+G E L+ F M++ G+ PN TF+++ + +
Sbjct: 165 AAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTT 224
Query: 391 ADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKC--GHLFEAQQFIEQKLPFEPTA 447
+EE + IH + +E G+ T LV V G+C G L A+ +++ + TA
Sbjct: 225 PSGLEELSRIHL--LITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITA 282
Query: 448 EFWEALRNYARIHG 461
W L N +HG
Sbjct: 283 --WNVLINGYTLHG 294
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +GVKA+ F + +P K +H +S D+ +N ++ Y KCGS
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+TDAR+VFD M RS+ +W+ MI+ Y+ + E +F++M+ G + + TFL++ A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 388 C 388
C
Sbjct: 121 C 121
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC--GSM 328
+G+ + F +L P E ++H + + ++N ++ +YG+C G +
Sbjct: 206 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGEL 265
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A + M ++ + +W+++INGY +G E L+ +++++ + ++ TF++V +AC
Sbjct: 266 DVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNAC 325
Query: 389 GSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
S+ ++ E IH S E G+ L + KCG + A++ + +P
Sbjct: 326 TSSTSLAEGKMIH--SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDS-MPIRSAV 382
Query: 448 EFWEALRNYARIHGD 462
+ L+ YA+ HG+
Sbjct: 383 SWNGMLQAYAQ-HGE 396
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 229/402 (56%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G + + EL+ +G + D ++ E CG E K VH ++ +
Sbjct: 490 IAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGL 549
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D V+ +I MY KCG +T+AR VFD +++R +W+ M+ GY +G+G E + LF++
Sbjct: 550 ESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKR 609
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M K + PNE TF AV SACG A ++E F M+ +F + PG +HY +V +LG+ G
Sbjct: 610 MLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAG 669
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA++FI Q++P EP W AL + H ++ L + A ++ L+PS A
Sbjct: 670 RLQEAEEFI-QRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLS 728
Query: 482 ----------DPKKIPTPP-----PKKRTAISI-LDGKSRLV---EFRNPTLYRDDEKLK 522
D K+ K R SI +DG+ + +P + +L+
Sbjct: 729 NIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELE 788
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L +MKE+ Y PD R+VLHD+D+ KE+AL +HSE+LAIAYGL+ TP TP+RI+KNLR
Sbjct: 789 MLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLR 848
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCH A K +S+I RE++ RD RFH+FK+G CSCGD+W
Sbjct: 849 VCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q K+ EA EL +K G+ +A F +L C P+ +++H + + + D+V
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG-----DEGLQLFEQ 368
+ N +I MY KC + DAR FD M+ R + SW MI GYA +G DE QL E+
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR+ G+ PN+ TF+++ AC A+E+ IH E S+ G + + KC
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI--SKVGFESDRSLQTAIFNMYAKC 434
Query: 428 GHLFEAQQFIEQ 439
G ++EA+Q +
Sbjct: 435 GSIYEAEQVFSK 446
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 11/245 (4%)
Query: 216 YQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVA--DLARLCQEGKVKEAIELMD--- 270
++Q +Q+ + V NN + P SV+ ++ RLC+ G++KEAI+L+
Sbjct: 11 WKQALQNYQVGAMTSIVYNNGFASTGEELAGPRSVSGGEVWRLCKAGRLKEAIQLLGIIK 70
Query: 271 -KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+G+ +++ + + E C + +E+ K VH + + D+ L N +I Y K G +
Sbjct: 71 QRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVA 130
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+VF M R + +W MI YA N + FE+M+ ++PN TFL++ AC
Sbjct: 131 SVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACN 190
Query: 390 SADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ +E+A IH ++ G+ L+ + KCG + A + I QK+ E
Sbjct: 191 NYSMLEKAREIH--TVVKASGMETDVAVATALITMYSKCGEISLACE-IFQKMK-ERNVV 246
Query: 449 FWEAL 453
W A+
Sbjct: 247 SWTAI 251
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V ++ MY KCG +T A +VF M+ R++ SW+LMI GYA +G + +L M+
Sbjct: 451 NVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G QP+ T +++ ACG+ A+E +H E++K G+ T L+G+ KCG
Sbjct: 511 VEGFQPDRVTIISILEACGALSALERGKLVHAEAVK--LGLESDTVVATSLIGMYSKCGE 568
Query: 430 LFEAQQFIEQ 439
+ EA+ ++
Sbjct: 569 VTEARTVFDK 578
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ D ++ + F ++ + C N E A+++H S + D+ + +I MY KCG
Sbjct: 170 MKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGE 229
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
++ A +F M +R++ SW +I A + +E +L+E+M + G+ PN TF+++ ++
Sbjct: 230 ISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS 289
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
C + +A+ IH S SE G+ L+ + KC + +A++
Sbjct: 290 CNTPEALNRGRRIH--SHISERGLETDVVVANALITMYCKCNCIQDARE 336
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 227/402 (56%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G EA ++++ +G+ DA+ + ++ C + E K+VH + + + +
Sbjct: 508 ISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGL 567
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL + N ++ MY KCGS+ DARRVFD M +R + SW +MI G A +G G + L LF +
Sbjct: 568 VSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVK 627
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+ G +PN +F+AV SAC A ++E F S+ ++GI P EHY +V +LG+ G
Sbjct: 628 MKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAG 687
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
L EA+ FI +P EP W AL +G++++ + A + + L P A
Sbjct: 688 QLEEAKHFI-LNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 746
Query: 484 ----------KKIPTPPPKKRTAISILDGKSRL-VEFRNPTLYRDD----------EKLK 522
+K+ +R I G+S + V+ + + D KLK
Sbjct: 747 NIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLK 806
Query: 523 AL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L ++K YVPDTR VL + DQE KEQAL HSE+LAI YGL+ TP R P+R+ KNLR
Sbjct: 807 DLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLR 866
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH A K +S++ GRE++ RD KRFHHFKDG CSCGDYW
Sbjct: 867 VCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 4/186 (2%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + +++ +G DA+ F + + E K+VH Y + + + DL + N
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGN 474
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG+ A++VFD M +R++ +W +MI+G A +G G E LF QM + G+ P
Sbjct: 475 ALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP 534
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ T++++ SAC S A+E +H ++ + G+ LV + KCG + +A++
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNA--GLVSDLRVGNALVHMYAKCGSVDDARR 592
Query: 436 FIEQKL 441
+ L
Sbjct: 593 VFDDML 598
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 70/116 (60%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ ++ + C +P + KK+H + +QS + D+ + ++ MY KCGS+ DA+ +FD M
Sbjct: 33 YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMV 92
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+R++ SW +MI G A G G E F QM++ G PN T++++ +A SA A+E
Sbjct: 93 ERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALE 148
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K+VH + ++ DL + N +I MY KCGS+ DAR VFD M DR + SW+ MI G
Sbjct: 251 EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGL 310
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS---ACGSADAIEEAFIHFESMKSEFGI 410
A NG G E +F +M++ G P+ T+L++ + + G+ + ++E H E G+
Sbjct: 311 AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH----AVEVGL 366
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
V + +CG + +A Q I KL W A+
Sbjct: 367 VSDLRVGSAFVHMYIRCGSIDDA-QLIFDKLAVRNVTT-WNAM 407
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 14/218 (6%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q G EA + K G D++ + +L + +E K+VH + ++
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ DL + + + MY +CGS+ DA+ +FD +A R++ +W+ MI G A G E L LF
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLF 424
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-TEHYLG--LVGV 423
QMR+ G P+ TF+ + SA+ EEA + + S + I G + +G LV +
Sbjct: 425 LQMRREGFFPDATTFVNIL----SANVGEEALEWVKEVHS-YAIDAGLVDLRVGNALVHM 479
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG+ A+Q + + E W + + HG
Sbjct: 480 YAKCGNTMYAKQVFDDMV--ERNVTTWTVMISGLAQHG 515
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K+VH + + + + DL + N ++ MY K GS+ DAR VFD M +R + SW +MI G
Sbjct: 148 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGL 207
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF--SACGSADAIE 395
A +G G E LF QM + G PN T+L++ SA S A+E
Sbjct: 208 AQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALE 251
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSE 407
MI GYA+ G ++ ++++ QMR+ G QPNE T+L++ AC S +++ IH ++S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
F E LV + KCG + +AQ ++ +
Sbjct: 61 FQSDVRVE--TALVNMYVKCGSIDDAQLIFDKMV 92
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 228/399 (57%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + K+AI++ MD +GV+ DA F T+ + C + + VHD S I D+
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L V+ YGKCG + +AR +FD + ++ +W ++ YA NG E ++L+ +M + G
Sbjct: 265 LGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGG 324
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+ N TFL + AC A + +F SM +FG+ P EHYL L+ +LG+ G L +
Sbjct: 325 LEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLS 384
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ I +P+EP + W AL R+HGD+D EL+ +LDP + P
Sbjct: 385 EDLI-NSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSS 443
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYR---DDEKLKAL 524
K + K+ +S ++ K R+ EF +P L R + E+LKA
Sbjct: 444 TGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKA- 502
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++KE+ YV D R VL D+++E KEQ L YHSERLAIA+GLISTP T L I+KNLRVC
Sbjct: 503 -RVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCF 561
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A+K +S++VGR+++VRD RFHHF++G CSCGDYW
Sbjct: 562 DCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+ + S + L + C + K K+VH ++ D ++ N +IEMYGKCG + +AR
Sbjct: 21 REEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARS 80
Query: 334 VFDHMADRSMD--SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
VFD + +++ D SW+ +I Y NGLG E L LF+ M G+ N+ T + AC S
Sbjct: 81 VFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASL 140
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ EE I ++ + + T LV + GKC ++ +A + + LP
Sbjct: 141 PSEEEGRI-VHAIAVDKRLESDTMVGTSLVNMFGKCKNV-DAARAVFDSLP 189
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 258 QEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA+ L MD +GV A+ + C + E + VH + + D +
Sbjct: 104 QNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTM 163
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++ M+GKC ++ AR VFD + +++ +W+ M+ Y+ N + +Q+F M G
Sbjct: 164 VGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEG 223
Query: 374 LQPNEQTFLAVFSACGSADA-IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+QP+ TFL + AC + A E +H + S GI ++ GKCG L
Sbjct: 224 VQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS--GIPMDVALGTAVMHFYGKCGRLDN 281
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYA 457
A+ + L + T + L YA
Sbjct: 282 ARAIFDS-LGKKNTVTWSAILAAYA 305
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 236/416 (56%), Gaps = 42/416 (10%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKK 298
D V+ S+ ++ Q G+ A++L+ + V+ + + C K+
Sbjct: 564 DVVVWNSI--ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + ++ + + N +I+MYG+CGS+ +RR+FD M R + SW++MI+ Y +G
Sbjct: 622 IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGF 681
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
G + + LF+Q R +GL+PN TF + SAC + IEE + +F+ MK+E+ + P E Y
Sbjct: 682 GMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYA 741
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+V +L + G E +FIE K+PFEP A W +L RIH + DL ++A + +L+P
Sbjct: 742 CMVDLLSRAGQFNETLEFIE-KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 800
Query: 479 SKA-----------------DPKKI--------PTPPPKKRTAISILDGKSRLVEF---- 509
+ D KI T PP S ++ K +L F
Sbjct: 801 QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP----GCSWIEVKRKLHSFVVGD 856
Query: 510 -RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+P + + K+++L +KE YVPDT +VL D+D++ KE +L HSE++A+A+GLIS
Sbjct: 857 TSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLIS 916
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T A TPLRIIKNLRVCGDCH+A K +S++ R++I+RDN RFHHF DG CSCGDYW
Sbjct: 917 TTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + C G +E I+L +++GV+ D F +F+ C K Y K V+DY L
Sbjct: 160 AIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI 219
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
G+ + +++M+ KCG M ARR F+ + + + W++M++GY G + L+
Sbjct: 220 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCI 279
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M+ G++P++ T+ A+ S + EEA +F M P + L+ +
Sbjct: 280 SDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQ 339
Query: 427 CGHLFEA 433
G+ FEA
Sbjct: 340 NGYDFEA 346
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDL 312
Q G EA+ + K GVK ++ + C N + +++H Y ++ + DL
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL 398
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N +++ Y KC S+ ARR F + + SW+ M+ GYA G +E ++L +M+
Sbjct: 399 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQ 458
Query: 373 GLQPNEQTF---LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G++P+ T+ + F+ G A E F SM G+ P T + G L CG
Sbjct: 459 GIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM----GMDPNTTT---ISGALAACGQ 511
Query: 430 L 430
+
Sbjct: 512 V 512
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD--EGLQLFEQMRK 371
L ++++E+Y + G + DARR+FD M++R++ SW ++ Y GLGD E ++LF M
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC--GLGDYEETIKLFYLMVN 183
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++P+ F VF AC ++ M S G + ++ + KCG +
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMD 242
Query: 432 EAQQFIEQ 439
A++F E+
Sbjct: 243 IARRFFEE 250
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G K A+E + G+ + + CG + + K++H Y L++ I
Sbjct: 476 QYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTG 535
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I MY C S+ A VF ++ R + W+ +I+ A +G L L +M
Sbjct: 536 VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG--TEHYL--GLVGVLGKCG 428
++ N T ++ AC A+ + IH +F I G T +++ L+ + G+CG
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIH------QFIIRCGLDTCNFILNSLIDMYGRCG 649
Query: 429 HLFEAQQFIE 438
+ ++++ +
Sbjct: 650 SIQKSRRIFD 659
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR-----SMDSWH 347
++ A K S ++ D V N +I Y + G +A + F M ++ SW
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+I G NG E L +F +M G++PN T + SAC
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 223/395 (56%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +EA+E L + + D F ++ C + K +H ++ + D+++
Sbjct: 543 GRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVK 602
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N + MY KCGSM +ARR+FD M RS SW+ M+ YA +G +E L+L +M + G++
Sbjct: 603 NALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVK 662
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N TF++V S+C A I E +F S+ + GI TEHY LV +LG+ G L EA++
Sbjct: 663 LNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 722
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------ 483
+I K+P EP W +L R+ D+D A +++LDP +
Sbjct: 723 YI-SKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERG 781
Query: 484 ---------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMK 528
+ + + KK IS + K+++ EFR +P +K++ L M+
Sbjct: 782 DWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMR 841
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E+ YVPDT+ VLHD+D+E KE L YHSE+LAIA+GLISTP + L I KNLRVC DCH
Sbjct: 842 EAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHT 901
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +S+I GRE++VRDN RFHHF+DG CSC DYW
Sbjct: 902 ATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G + D F ++ + C NP+ ++ K V + +++ DL + +I MY +C S D
Sbjct: 255 EGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPED 314
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +VF M ++ +W +I +AD+G E L+ F M++ G+ PN TF+++ + +
Sbjct: 315 AAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTT 374
Query: 391 ADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+EE + IH + +E G+ T LV V G+C
Sbjct: 375 PSGLEELSRIHL--LITEHGLDDTTTMRNALVNVYGRC 410
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
V L C + V+ ++ +GVKA+ F + +P K +H +S
Sbjct: 133 VYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHS 192
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D+ +N ++ Y KCGS+TDAR+VFD M RS+ +W+ MI+ Y+ + E +F++M
Sbjct: 193 LDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRM 252
Query: 370 RKLGLQPNEQTFLAVFSAC 388
++ G + + TFL++ AC
Sbjct: 253 QQEGERCDRVTFLSILDAC 271
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY +CGS+ DA F + R++ SW++MI+ Y+ E L LF M G+ PN T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
+AV ++CGS + + I ++ E G T L+ + GKCG L +AQ E+
Sbjct: 61 LVAVLNSCGSFRELRDG-ILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 441 LPFEPTAEFWEALRNYARIHG 461
E W A+ + G
Sbjct: 120 A--EKNVVTWNAMLGVYSLQG 138
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +GV +A + CG+ + + VH L+ + ++ ++ MYGKCG+
Sbjct: 49 MLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGT 108
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLG-DEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA+ VF+ MA++++ +W+ M+ Y+ G ++LF +M G++ N TFL V +
Sbjct: 109 LLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLN 168
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ DA+ + FIH +SE + LV KCG L +A++ +
Sbjct: 169 SVVDPDALRKGKFIHSCVRESEHSLDVFVNT--ALVNTYTKCGSLTDARKVFD 219
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ + F +L P E ++H + + + N ++ +YG+C S D
Sbjct: 356 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG- 389
AR VFD + ++ SW+ MI Y D+ LQLF M++ G+QP+ F+ + AC
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTI 475
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ +H +S G SP + LV + K G L A+ +++ + TA
Sbjct: 476 GSHGRTRKLVHQCVEESGLGGSPLVQT--SLVNMYAKAGELDVAEVILQEMDEQQITA-- 531
Query: 450 WEALRNYARIHG 461
W L N +HG
Sbjct: 532 WNVLINGYALHG 543
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G++ D F T+ C K VH +S + G ++ ++ MY K G +
Sbjct: 457 QGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDV 516
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A + M ++ + +W+++INGYA +G E L+ +++++ + ++ TF++V +AC S
Sbjct: 517 AEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTS 576
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ ++ E IH S E G+ L + KCG + A++ + +P +
Sbjct: 577 STSLAEGKMIH--SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDS-MPIRSAVSW 633
Query: 450 WEALRNYARIHGD 462
L+ YA+ HG+
Sbjct: 634 NGMLQAYAQ-HGE 645
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 225/402 (55%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G E + +++ +K + F ++ C + K++H Y ++S
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
G++ + + +++MY KCG++ AR +FD M M SW MI GYA +G + + LF++
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 428
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M G++PN F+AV +AC A ++EA+ +F SM ++ I PG EHY + +LG+ G
Sbjct: 429 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 488
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA +FI + EPT W L R+H +I+L + + + +DP
Sbjct: 489 RLEEAYEFISD-MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLS 547
Query: 482 ----------DPKKIPTPP----PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
D +K+ KK+ A S ++ K+++ F +P R +E LK
Sbjct: 548 NIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALK 607
Query: 523 AL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L QM+ YV DT VLHD+++E K L HSERLAI +G+ISTPA T +R+ KNLR
Sbjct: 608 VLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 667
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH A K +S+IVGRE++VRDN RFHHFKDGKCSCGD+W
Sbjct: 668 VCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ D+ + + +I+MY KC + D+ RVF + SW+ +I G
Sbjct: 255 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQ 314
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
NG+ DEGL+ F+QM ++PN +F ++ AC + +H ++S F +
Sbjct: 315 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFI 374
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG++ A+ ++ ++ + W A+ +HG
Sbjct: 375 AS--ALVDMYAKCGNIRTARWIFDKMELYDMVS--WTAMIMGYALHG 417
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I+++ G D + F ++ + C K + VH ++ + DL N ++ MY K
Sbjct: 95 IQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKF 154
Query: 326 GSMTDA-----------------------------RRVFDHMADRSMDSWHLMINGYADN 356
S+ + R+VF+ M R + SW+ +I+G A N
Sbjct: 155 WSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQN 214
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G+ ++ L + +M L+P+ T +V
Sbjct: 215 GMHEDALMMVREMGNADLRPDSFTLSSVL 243
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 223/386 (57%), Gaps = 28/386 (7%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
A ++ ++GV + F ++ C + E K+VH ++ ++GD+ + +I MY K
Sbjct: 777 AYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAK 836
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CGS+ +A+ VFD+ ++++ +W+ MIN YA +GL + L F M K G++P+ TF ++
Sbjct: 837 CGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSI 896
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SAC + + E F S++S+ G+SP EHY LVG+LG+ G EA+ I Q +PF
Sbjct: 897 LSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQ-MPFP 955
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------------DPSK-- 480
P A WE L RIHG++ L +HA + L D +K
Sbjct: 956 PDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIR 1015
Query: 481 --ADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALN-QMKESTYVPDTR 537
+ + I P + + + + + +P E+LK L+ +M+ + Y PDT+
Sbjct: 1016 RVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQ 1075
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YVLH++D+E +E +L HSERLAIAYGL+ TP TP+RI KNLR+CGDCH A K +S++V
Sbjct: 1076 YVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLV 1135
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE+I RD+ RFH FK+GKCSC D+W
Sbjct: 1136 GREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 13/218 (5%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + +G+ ++A EL + G K S F ++ + C + + KKV + L S
Sbjct: 658 AMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS 717
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + N +I Y K GSMTDAR+VFD M +R + SW+ MI GYA NGLG LQ
Sbjct: 718 GYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFA 777
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGV 423
QM++ G+ N+ +F+++ +AC S A+EE +H E +K + + G L+ +
Sbjct: 778 YQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGA----ALISM 833
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG L EAQ+ + E W A+ N HG
Sbjct: 834 YAKCGSLEEAQEVFDNFT--EKNVVTWNAMINAYAQHG 869
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E K +E+ +G++ D F ++ C NP+ E +++H ++S ++ D+ L N +
Sbjct: 569 EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNAL 628
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY +CGS+ DA VF + R++ SW MI G+AD G + +LF QM+ G +P +
Sbjct: 629 INMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVK 688
Query: 379 QTFLAVFSACGSADAIEE---AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
TF ++ AC S+ ++E H + E G L+ K G + +A++
Sbjct: 689 STFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN----ALISAYSKSGSMTDARK 744
Query: 436 FIEQKLPFEPTAEFWEALRNYAR 458
+ K+P + + + YA+
Sbjct: 745 VFD-KMPNRDIMSWNKMIAGYAQ 766
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 12/241 (4%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A L Q G +EA E + GV + + + ++ C K + +H + +
Sbjct: 355 ALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D+ + N +I MY +CG + AR +F+ M R + SW+ +I GYA E ++L+
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLY 474
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+QM+ G++P TFL + SAC ++ A + IH + ++S GI L+ +
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS--GIKSNGHLANALMNMYR 532
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
+CG + EAQ E + + W ++ HG + A +L +++ +P K
Sbjct: 533 RCGSIMEAQNVFEGTRARDIIS--WNSMIAGHAQHGSY---EAAYKLFLEMKKEGLEPDK 587
Query: 486 I 486
I
Sbjct: 588 I 588
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ +GVK F L C N Y + K +H+ L+S I+ + L N ++ MY +CG
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ +A+ VF+ R + SW+ MI G+A +G + +LF +M+K GL+P++ TF +V
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
C + +A+E IH ++S G+ L+ + +CG L +A +
Sbjct: 596 GCKNPEALELGRQIHMLIIES--GLQLDVNLGNALINMYIRCGSLQDAYE 643
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 142/301 (47%), Gaps = 28/301 (9%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+ + L + C + AK++H +++ + D+ L+N +I MY KC S++DA +VF
Sbjct: 83 AAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLK 142
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
M R + SW+ +I+ YA G + QLFE+M+ G P++ T++++ +AC S +E
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 398 -FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
IH + +++ + P ++ L+ + GKC L A+Q + + + +Y
Sbjct: 203 KKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVF--------SGIYRRDVVSY 252
Query: 457 ARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR 516
+ G + + EE + ++ PP K T I++LD F P++
Sbjct: 253 NTMLGLYAQKAYVEECIGLFGQMSSEG-----IPPDKVTYINLLDA------FTTPSMLD 301
Query: 517 DDEKLK--ALNQMKESTYVPDTRYVLHDI---DQEAKEQALLYHSERLAIAY-GLISTPA 570
+ +++ A+N+ S T + D +QAL ++R + Y LI+ A
Sbjct: 302 EGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALA 361
Query: 571 R 571
+
Sbjct: 362 Q 362
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L Q+ V+E I L +G+ D + L + P + K++H + +
Sbjct: 256 LGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGL 315
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + M+ +CG + A++ + ADR + ++ +I A +G +E + + Q
Sbjct: 316 NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQ 375
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR G+ N T+L+V +AC ++ A+ IH S SE G S + L+ + +C
Sbjct: 376 MRSDGVVMNRTTYLSVLNACSTSKALGAGELIH--SHISEVGHSSDVQIGNSLISMYARC 433
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
G L A++ +P + + YAR
Sbjct: 434 GDLPRARELF-NTMPKRDLISWNAIIAGYAR 463
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G K+A +L ++ G + ++ C +P E KK+H +++ + D
Sbjct: 160 QQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPR 219
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ MYGKC + AR+VF + R + S++ M+ YA +E + LF QM G
Sbjct: 220 VQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEG 279
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P++ T++ + A + ++E IH + G++ L + +CG +
Sbjct: 280 IPPDKVTYINLLDAFTTPSMLDEGKRIH--KLAVNEGLNSDIRVGTALATMFVRCGDVAG 337
Query: 433 AQQFIE 438
A+Q +E
Sbjct: 338 AKQALE 343
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 239/426 (56%), Gaps = 35/426 (8%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLF 284
L + N N P D V ++ +A Q G+ + A + + + GVK D F L
Sbjct: 559 LMSAMNLFNDMPERDLVSWNTI--IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLL 616
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C +P+ +++H ++ + D+V+ +I MY KCGS+ DA VF ++ +++
Sbjct: 617 NACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVY 676
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW MI GYA +G G E L+LF QM++ G++P+ TF+ SAC A I+E HFESM
Sbjct: 677 SWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM 736
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
K +F I P EHY +V + G+ G L EA +FI K+ +P + W AL ++H D++
Sbjct: 737 K-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFI-NKMQVKPDSRLWGALLGACQVHLDVE 794
Query: 465 LEDHAEELMVDLDP-------------SKADPKKIPTPPPKKRTAISILD--GKSRL-VE 508
L + + ++LDP + A K T K ++ G+S + V+
Sbjct: 795 LAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVD 854
Query: 509 FRNPTLYRDDE----------KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
R DD+ +L L+ +MK+ YVPDTRYVLHD++ KE AL +HSE
Sbjct: 855 GRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSE 914
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
RLAIAYGL+ TP TP+ I KNLRVCGDCH A K++S+I R++I RD+ RFHHFKDG C
Sbjct: 915 RLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVC 974
Query: 618 SCGDYW 623
SCGD+W
Sbjct: 975 SCGDFW 980
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 236 MNQCPAGDQVLPPS-VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWY 293
N P D + S + LAR Q + ++M++ GV+ D F +L + C +P+
Sbjct: 263 FNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEAL 322
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K+VH + + ++ + ++ MY KCGSM DA VF+ + R++ SW MI G+
Sbjct: 323 EQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGF 382
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP 412
A +G +E F +M + G++PN TF+++ AC A+++ IH +K+ G
Sbjct: 383 AQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA--GYIT 440
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
L+ + KCG L +A+ E+
Sbjct: 441 DDRVRTALLSMYAKCGSLMDARNVFER 467
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ +G+K D+S F ++ +C +P E K V +++ DL + N ++ M+ CG
Sbjct: 499 LLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGD 558
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A +F+ M +R + SW+ +I G+ +G F+ M++ G++P++ TF + +A
Sbjct: 559 LMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNA 618
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C S +A+ E ++ +E + GL+ + KCG + +A + LP +
Sbjct: 619 CASPEALTEGR-RLHALITEAALDCDVVVGTGLISMYTKCGSIDDA-HLVFHNLPKKNVY 676
Query: 448 EFWEALRNYARIHG 461
+ + YA+ HG
Sbjct: 677 SWTSMITGYAQ-HG 689
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G+++EA ++++ G++ + F ++ C P + +++HD +++
Sbjct: 377 AMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA 436
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + ++ MY KCGS+ DAR VF+ ++ +++ +W+ MI Y + D + F
Sbjct: 437 GYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATF 496
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+ + K G++P+ TF ++ + C S DA+E +S+ G LV +
Sbjct: 497 QALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVN 555
Query: 427 CGHLFEAQ 434
CG L A
Sbjct: 556 CGDLMSAM 563
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L RL + G++ EA+ ++ ++ + +L +LC K + +++H++ S
Sbjct: 74 AFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFS 133
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I+ D+ + N +I MY KCG+ A+++FD M D+ + SW+L++ GY + +E +L
Sbjct: 134 KIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLH 193
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
EQM + G++P++ TF+ + +AC A +++
Sbjct: 194 EQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 5/171 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GVK D F + C + K + ++ L + DL + +I M+ KCG
Sbjct: 195 QMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCG 254
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA +VF+++ R + +W MI G A + + LF+ M + G+QP++ F+++
Sbjct: 255 GVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLK 314
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQ 435
AC +A+E+ MK E G+ TE Y+G L+ + KCG + +A +
Sbjct: 315 ACNHPEALEQGKRVHARMK-EVGLD--TEIYVGTALLSMYTKCGSMEDALE 362
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 227/383 (59%), Gaps = 29/383 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + + +LF C + + E K VH Y ++S + N +++MY K GS
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR++FD +A R + SW+ ++ YA +G G E + FE+MR++G++PNE +FL+V +A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + ++E + ++E MK + GI P HY+ +V +LG+ G L A +FIE+ +P EPTA
Sbjct: 373 CSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE-MPIEPTA 430
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKI 486
W+AL N R+H + +L +A E + +LDP P KK+
Sbjct: 431 AIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKM 490
Query: 487 PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVL 540
KK A S ++ ++ + F R+P K + L ++KE YVPDT +V+
Sbjct: 491 KESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVI 550
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
+DQ+ +E L YHSE++A+A+ L++TP + + I KN+RVCGDCH AIK+ S++VGRE
Sbjct: 551 VHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGRE 610
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+IVRD RFHHFKDG CSC DYW
Sbjct: 611 IIVRDTNRFHHFKDGNCSCKDYW 633
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+ AD + TL + C K + VH + LQS R D+V+ N ++ MY KCGS+ +AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+VF+ M R +W +I+GY+ + + L F QM + G PNE T +V A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + ++ ++ + + ++++Y + G M DA+ VFD + R+ SW+ +I G+A
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS 406
++ L+LF+ M + G +P+ ++ ++F AC S +E+ ++H +KS
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/389 (38%), Positives = 222/389 (57%), Gaps = 28/389 (7%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V+ A ++ ++ V + F +L C + E K+VH ++ ++GD+ + +I M
Sbjct: 719 VEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISM 778
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCGS +A+ VFD++ ++++ +W+ MIN YA +GL + L F M K G++P+ TF
Sbjct: 779 YAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTF 838
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
++ SAC A + E + F SM+SE+G+ P EHY LVG+LG+ EA+ I Q +
Sbjct: 839 TSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQ-M 897
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------------DPS 479
PF P A WE L RIHG+I L +HA + L D +
Sbjct: 898 PFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVA 957
Query: 480 K----ADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALN-QMKESTYVP 534
K + + I P + + + + + +P +LK L+ +M+E+ Y P
Sbjct: 958 KIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFP 1017
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
DT++VLHD+ + +E +L HSERLAIAYGLI TP TP+RI KNLR+CGDCH A K +S
Sbjct: 1018 DTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFIS 1077
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++VGRE+I RD+ RFH FK+GKCSC DYW
Sbjct: 1078 KLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 259 EGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+G+ +AIEL ++G + S F ++ ++C + + KKV Y L S D +
Sbjct: 611 QGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGV 670
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I Y K GSMTDAR VFD M R + SW+ +I GYA NGLG ++ QM++ +
Sbjct: 671 GNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLF 431
PN+ +F+++ +AC S A+EE +H E +K + + G L+ + KCG
Sbjct: 731 VPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGA----ALISMYAKCGSQG 786
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
EAQ+ + + E W A+ N HG
Sbjct: 787 EAQEVFDNII--EKNVVTWNAMINAYAQHG 814
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A L Q G EA E + GV + + + ++ C K E K +H + +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D+ + N +I MY +CG + AR +F M R + SW+ +I GYA E ++L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+QM+ G++P TFL + SAC ++ A + IH + ++S GI L+ +
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYR 477
Query: 426 KCGHLFEAQQFIE 438
+CG L EAQ E
Sbjct: 478 RCGSLMEAQNVFE 490
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+ + L + C + AK++H +++ + D+ L+N +I MY KC S+ DA +VF
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
M R + SW+ +I+ YA G + QLFE+M+ G PN+ T++++ +AC S +E
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 398 -FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
IH + +K+ + P ++ L+ + GKCG L A+Q
Sbjct: 148 KKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQ 184
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ ++ ++ D F ++ C NP+ E K++H +S ++ D+ L N +I MY +CG
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCG 581
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DAR VF + R + SW MI G AD G + ++LF QM+ G +P + TF ++
Sbjct: 582 SLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILK 641
Query: 387 ACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
C S+ ++E A+I + S + + G + L+ K G + +A++ + K+
Sbjct: 642 VCTSSACLDEGKKVIAYI----LNSGYELDTGVGN--ALISAYSKSGSMTDAREVFD-KM 694
Query: 442 PFEPTAEFWEALRNYAR 458
P + + + YA+
Sbjct: 695 PSRDIVSWNKIIAGYAQ 711
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ +GVK F L C N Y + K +H+ L+S I+ + L N ++ MY +CG
Sbjct: 421 QMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCG 480
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ +A+ VF+ R + SW+ MI G+A +G + +LF++M+ L+P+ TF +V S
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
C + +A+E +E G+ L+ + +CG L +A+
Sbjct: 541 GCKNPEALELG-KQIHGRITESGLQLDVNLGNALINMYIRCGSLQDAR 587
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G K+A +L ++ G + + ++ C +P EN KK+H +++ + D
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPR 164
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ MYGKCG + AR+VF ++ R + S++ M+ YA E L LF QM G
Sbjct: 165 VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG 224
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P++ T++ + A + ++E IH + E G++ LV + +CG +
Sbjct: 225 ISPDKVTYINLLDAFTTPSMLDEGKRIH--KLTVEEGLNSDIRVGTALVTMCVRCGDVDS 282
Query: 433 AQQFIEQKLPFEPTAE 448
A+Q F+ TA+
Sbjct: 283 AKQ------AFKGTAD 292
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 20/259 (7%)
Query: 217 QQVSPGHQ----IPNQLNNVPNNMNQCPAGDQVL----PPSVAD----LARLCQEGKVKE 264
Q + G+Q + N L ++ P QV P V L Q+ VKE
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212
Query: 265 AIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
+ L +G+ D + L + P + K++H ++ + D+ + ++
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
M +CG + A++ F ADR + ++ +I A +G E + + +MR G+ N T
Sbjct: 273 MCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTT 332
Query: 381 FLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+L++ +AC ++ A+E IH S SE G S + L+ + +CG L +A++
Sbjct: 333 YLSILNACSTSKALEAGKLIH--SHISEDGHSSDVQIGNALISMYARCGDLPKARELF-Y 389
Query: 440 KLPFEPTAEFWEALRNYAR 458
+P + + YAR
Sbjct: 390 TMPKRDLISWNAIIAGYAR 408
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 222/395 (56%), Gaps = 38/395 (9%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L D+ G+K D + + C N E A+++H + D + N +
Sbjct: 512 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNAL 571
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ Y KCGS +DA VF+ M R++ SW+ +I G A +G G + LQLFE+M+ G++P+
Sbjct: 572 VSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDI 631
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+++ SAC A +EE +F SM +F I P EHY +V +LG+ G L EA+ I
Sbjct: 632 VTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALI- 690
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--LMVDLD------------------P 478
+ +PF+ W AL RIHG++ + + A E L +DLD
Sbjct: 691 KTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWD 750
Query: 479 SKADPKKI-----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMK 528
S A +K+ T P R+ I + D V ++ +Y + ++L + MK
Sbjct: 751 SAAKLRKLMEQRGVTKEP-GRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLT--HAMK 807
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVPDTR V+HD+D+ KE A+ +HSERLAIAYGLISTP T + I KNLRVC DCH
Sbjct: 808 MKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHT 867
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +S+IV RE+I RD RFHHFKDG CSCGDYW
Sbjct: 868 ATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 7/215 (3%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L + G EA+ E+ GV+ + + ++ C +P E +++H +++
Sbjct: 399 AMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA 458
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D + N ++ MY CGS+ DAR+VFD M R + +++ MI GYA + LG E L+LF
Sbjct: 459 GLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLF 518
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+++++ GL+P++ T++ + +AC ++ ++E A ++ + G T LV K
Sbjct: 519 DRLQEEGLKPDKVTYINMLNACANSGSLEWAR-EIHTLVRKGGFFSDTSVGNALVSTYAK 577
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
CG +A E+ + W A+ + HG
Sbjct: 578 CGSFSDASIVFEKMTKRNVIS--WNAIIGGSAQHG 610
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ L + G +EA E+ + +GV + + L C N K++H ++
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + N +I MY +CGS+ DAR VFD M + + SW MI G A +G G E L ++++
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLG 425
M++ G++PN T+ ++ +AC S A+E IH + + E G++ T+ ++G LV +
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV--EAGLA--TDAHVGNTLVNMYS 475
Query: 426 KCGHLFEAQQFIEQKLPFEPTA 447
CG + +A+Q ++ + + A
Sbjct: 476 MCGSVKDARQVFDRMIQRDIVA 497
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +++A++L+ + G+ D + + C +P E +++H +Q+ + D+
Sbjct: 103 QYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVK 162
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ MY KCGS+ +AR VFD M +S+ SW + I GYAD G + ++F++M + G
Sbjct: 163 VANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEG 222
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ PN T+++V +A S A++ +H + + G T LV + KCG +
Sbjct: 223 VVPNRITYISVLNAFSSPAALKWGKAVHSRILNA--GHESDTAVGTALVKMYAKCGSYKD 280
Query: 433 AQQFIEQ 439
+Q E+
Sbjct: 281 CRQVFEK 287
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ + A E+ K GV + + ++ +P + K VH L + D +
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCGS D R+VF+ + +R + +W+ MI G A+ G +E +++ QM++ G+
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM 325
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PN+ T++ + +AC ++ A+ IH K+ F G ++ L+ + +CG + +A+
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQN--ALISMYSRCGSIKDAR 383
Query: 435 QFIEQKLPFEPTAEFWEAL 453
++ + + + W A+
Sbjct: 384 LVFDKMVRKDVIS--WTAM 400
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 18/250 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
++G V L +G + ++S + + + C K ++VH + +Q D N
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 318 VIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I MY +CGS+ +AR+V+ ++ +R++ SW+ M+ GY G ++ L+L QM++ GL
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+ T ++ S+C S A+E IHF++M++ G+ + ++ + KCG + EA+
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKR 494
+ + K+ + + + YA D + A E+ ++ P +I
Sbjct: 182 EVFD-KMEKKSVVSWTITIGGYA----DCGRSETAFEIFQKMEQEGVVPNRI-------- 228
Query: 495 TAISILDGKS 504
T IS+L+ S
Sbjct: 229 TYISVLNAFS 238
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 229/401 (57%), Gaps = 40/401 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ A++L+ + V+ + + C K++H + ++ +
Sbjct: 334 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 393
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MYG+CGS+ +RR+FD M R + SW++MI+ Y +G G + + LF+Q R +G
Sbjct: 394 ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG 453
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+PN TF + SAC + IEE + +F+ MK+E+ + P E Y +V +L + G E
Sbjct: 454 LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNET 513
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
+FIE K+PFEP A W +L RIH + DL ++A + +L+P +
Sbjct: 514 LEFIE-KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSA 572
Query: 482 -----DPKKI--------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKA 523
D KI T PP S ++ K +L F +P + + K+++
Sbjct: 573 AGRWEDAAKIRCLMKERGVTKPP----GCSWIEVKRKLHSFVVGDTSHPLMEQISAKMES 628
Query: 524 LN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L +KE YVPDT +VL D+D++ KE +L HSE++A+A+GLIST A TPLRIIKNLRV
Sbjct: 629 LYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRV 688
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH+A K +S++ R++I+RDN RFHHF DG CSCGDYW
Sbjct: 689 CGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + C G +E I+L +++GV+ D F +F+ C K Y K V+DY L
Sbjct: 81 AIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI 140
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
G+ + +++M+ KCG M ARR F+ + + + W++M++GY G + L +F
Sbjct: 141 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVF 200
Query: 367 EQMRKLGLQPNEQTFLAVFSAC 388
+M G++PN T + SAC
Sbjct: 201 RKMVLEGVKPNSITIASAVSAC 222
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD--EGLQLFEQMRK 371
L ++++E+Y + G + DARR+FD M++R++ SW ++ Y GLGD E ++LF M
Sbjct: 47 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC--GLGDYEETIKLFYLMVN 104
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++P+ F VF AC ++ M S G + ++ + KCG +
Sbjct: 105 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMD 163
Query: 432 EAQQFIEQ 439
A++F E+
Sbjct: 164 IARRFFEE 171
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 259 EGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDLV 313
+G+ K+A+ + K GVK ++ + C N + +++H Y ++ + DL+
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 249
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLM--INGYADNGLGDEGLQLFEQM 369
+ N +++ Y KC S+ ARR F + + SW+ M + G+ G G L+ F++M
Sbjct: 250 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 219/394 (55%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C ++++ +G+ DA+ + ++ C + E K+VH++ + + + DL + N
Sbjct: 705 CGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGN 764
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCGS+ DAR VFD M +R + SW +MI G A +G G E L F +M+ G +P
Sbjct: 765 ALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKP 824
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N +++AV +AC A ++E F SM ++GI P EHY +V +LG+ G L EA+ F
Sbjct: 825 NGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELF 884
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------- 483
I +P EP W AL +G++++ + A + + L P A
Sbjct: 885 I-LNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGK 943
Query: 484 --KKIPTPPPKKRTAISILDGKSRL-VEFRNPTLYRDD-------EKLKALN----QMKE 529
+K+ +R I G+S + V+ R + D E LN ++K
Sbjct: 944 WEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKA 1003
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPDTR VL + DQE KEQAL HSE+LAI YGL+ T ++ P+R+ KNLRVC DCH A
Sbjct: 1004 KGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTA 1063
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I GRE++ RD KRFHHFKDG CSCGDYW
Sbjct: 1064 TKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K VH + ++ DL + N +I MY KCGS+ DAR VFD M DR + SW+ M+ G
Sbjct: 440 EWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGL 499
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
A NG G E +F QM++ GL P+ T+L++ + GS DA+E
Sbjct: 500 AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALE 541
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 70/116 (60%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ ++ + C P + KK+H + +QS + D+ + ++ MY KCGS+ DA+ +FD M
Sbjct: 222 YLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMV 281
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+R++ SW +MI G A G G E LF QM++ G PN T++++ +A SA A+E
Sbjct: 282 ERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K+VH + + + + DL + N ++ MY K GS+ DAR VFD M +R + SW +MI G
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGL 396
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF--SACGSADAIEEAFIHFESMKSEFGIS 411
A +G G E LF QM++ G PN T+L++ SA S A+E + E G
Sbjct: 397 AQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKV-VHKHAEEAGFI 455
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQ 434
L+ + KCG + +A+
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDAR 478
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + +++ +G DA+ F + + + E K+VH + + + DL + N
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV-DLRVGN 663
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ Y KCG++ A++VFD M +R++ +W +MI G A +G G + F QM + G+ P
Sbjct: 664 ALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVP 723
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ T++++ SAC S A+E +H ++ + G+ LV + KCG + +A+
Sbjct: 724 DATTYVSILSACASTGALEWVKEVHNHAVSA--GLVSDLRVGNALVHMYAKCGSIDDARS 781
Query: 436 FIE 438
+
Sbjct: 782 VFD 784
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 251 ADLARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q G EA +++ +G+ D++ + +L G+ E +VH + +++
Sbjct: 494 AMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVET 553
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D + + I MY +CGS+ DAR +FD ++ R + +W+ MI G A G E L LF
Sbjct: 554 GLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLF 613
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVL 424
QM++ G P+ TF+ + SA+ EEA + + S + + +G LV
Sbjct: 614 LQMQREGFIPDATTFINIL----SANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTY 669
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG++ A+Q + + E W + HG
Sbjct: 670 SKCGNVKYAKQVFDDMV--ERNVTTWTMMIGGLAQHG 704
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 263 KEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
K+A+ ++ +G+ D+ + + + C + AK+VH ++S + +L + NK+
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ +Y +CG + AR+VFD + +++ W MI GYA+ G ++ ++++++MR+ QPNE
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T+L++ AC ++ IH ++S F E LV + KCG + +AQ
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE--TALVNMYVKCGSIEDAQLIF 277
Query: 438 EQKL 441
++ +
Sbjct: 278 DKMV 281
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 235/402 (58%), Gaps = 30/402 (7%)
Query: 250 VADLARLCQEGKVKEAIE-LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A AR C K E + ++ +G + + +LF C + + E K VH Y ++S
Sbjct: 225 IAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 284
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ N +++MY K GS+ DAR++FD +A R + SW+ ++ YA +G G+E + FE+
Sbjct: 285 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEE 344
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
MR+ G++PNE +FL+V +AC + ++E + ++E MK + GI HY+ +V +LG+ G
Sbjct: 345 MRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAG 403
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
L A +FIE+ +P EPTA W+AL N R+H + +L +A E + +LDP P
Sbjct: 404 DLNRALRFIEE-MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 462
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
KK+ KK A S ++ ++ + F R+P K +
Sbjct: 463 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 522
Query: 523 -ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L ++KE YVPDT +V+ +DQ+ +E L YHSE++A+A+ L++TP + + I KN+R
Sbjct: 523 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 582
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCH+AIK+ S+ VGRE+IVRD RFHHFKDG CSC DYW
Sbjct: 583 VCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 66/118 (55%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+ D + TL + C K + VH + +QS R DLV+NN ++ MY KCGS+ +AR
Sbjct: 47 IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+VFD M +R +W +I+GY+ + + L LF QM + G PNE T +V A +
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAA 164
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + ++ ++ + + ++++Y + G M DA+ VFD + R+ SW+ +I G+A
Sbjct: 173 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRC 232
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS 406
++ L+LF+ M + G +P+ ++ ++F AC S +E+ ++H +KS
Sbjct: 233 GTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 282
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 224/402 (55%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G + + EL+ +G + D T+ E CG E K VH ++ +
Sbjct: 468 IAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGL 527
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D V+ +I MY KCG + +AR VFD M++R +W+ M+ GY +G G E + LF++
Sbjct: 528 ESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKR 587
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M K + PNE T AV SAC A ++E F M+ +F ++P +HY +V +LG+ G
Sbjct: 588 MLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAG 647
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA++FI Q +P EP W AL + H ++ L + A +++L+PS A
Sbjct: 648 RLQEAEEFI-QSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLS 706
Query: 482 ----------DPKKIPTPP-----PKKRTAISI-LDGKSRLV---EFRNPTLYRDDEKLK 522
D K+ K R SI +DG+ + +P + +L+
Sbjct: 707 NIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELE 766
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L +MKE+ Y PD R+VLHD+D KE+AL +HSE+LAIAYGL+ TP+ TP+RI+KNLR
Sbjct: 767 TLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLR 826
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCH A K +S+I RE++ RD RFH+F +G CSCGD+W
Sbjct: 827 VCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 12/192 (6%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q K+ EA EL + G+ +A F +L C P+ +++H + + + D++
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG-----DEGLQLFEQ 368
+ N +I MY KC S+ +AR +FD M+ R + SW MI GYA +G DE QL E+
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR+ G+ PN+ TF+++ AC + A+E+ IH E K F + + + + KC
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKC 412
Query: 428 GHLFEAQQFIEQ 439
G ++EA+Q +
Sbjct: 413 GSIYEAEQVFSK 424
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 247 PPSVA--DLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVH 300
P SV+ ++ RLC+ G+++EAI+L+ +G+ +++ + + E C + +E+ K VH
Sbjct: 20 PTSVSGGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVH 79
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
+ + D+ L N +I Y K + A +VF M R + +W MI YA N
Sbjct: 80 KQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPA 139
Query: 361 EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG 419
+ FE+M ++PN TFL++ AC + +E+ IH ++ G+
Sbjct: 140 KAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH--TIVKAMGMETDVAVATA 197
Query: 420 LVGVLGKCGHL 430
L+ + KCG +
Sbjct: 198 LITMYSKCGEI 208
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V + MY KCG ++ A +VF M R++ SW+LMI GYA NG + +L M+
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G QP+ T + + ACG+ +E +H E++K G+ T L+G+ KCG
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK--LGLESDTVVATSLIGMYSKCGQ 546
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
+ EA+ + K+ T + L Y + HGD
Sbjct: 547 VAEARTVFD-KMSNRDTVAWNAMLAGYGQ-HGD 577
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ D ++ + F ++ + C N E +K+H + D+ + +I MY KCG
Sbjct: 148 MTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGE 207
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
++ A VF M +R++ SW +I A + +E +L+EQM + G+ PN TF+++ ++
Sbjct: 208 ISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNS 267
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C + +A+ IH S SE G+ L+ + KC + EA++ ++
Sbjct: 268 CNTPEALNRGRRIH--SHISERGLETDMIVANALITMYCKCNSVQEAREIFDR 318
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 218/380 (57%), Gaps = 28/380 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV + ++ +C + ++ ++VH ++S DL + + +I MY KCG +
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVR 388
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A+ +F+ + + W+ MI GY+ +GLG+E L +F M G+QP+E TF+ V SAC
Sbjct: 389 AKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSY 448
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ ++E F FE+MK + + PG EHY +V +LG+ G + EA + +E K+P EP A W
Sbjct: 449 SGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVE-KMPMEPDAIVW 507
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PPPKKRTAISILDGK--SR 505
AL R H +DL + A E + L+P A P + + + + +L K R
Sbjct: 508 GALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR 567
Query: 506 LVEFRNPTLYRDDEKL--------------KALNQM--------KESTYVPDTRYVLHDI 543
+++F + ++K+ + QM +E+ Y PD +VLHD+
Sbjct: 568 VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDV 627
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D+E K +L YHSERLA+AYGL+ P P+R++KNLRVCGDCH+AIK+++++ GRE+I+
Sbjct: 628 DEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIL 687
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHFKDG CSC D+W
Sbjct: 688 RDANRFHHFKDGSCSCKDFW 707
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
QEG V+EA +L + + + + + ++AKK+ D + D+V+
Sbjct: 126 QEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTN 181
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y + G + +AR +FD M R++ +W M++GYA NG D +LFE M + N
Sbjct: 182 MIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMP----ERN 237
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQ 435
E ++ A+ + ++EAF FE+M ++ I E L GL G + + +FE +
Sbjct: 238 EVSWTAMLMGYTQSGRMKEAFELFEAMPVKW-IVACNEMILQFGLAGEMHRARMMFEGMK 296
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V N++I +G G M AR +F+ M +R +W+ MI + GL E L LF +M++
Sbjct: 269 IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
G+ N + ++V S C S +++ +H ++SEF + Y+ L+ + KCG
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEF----DQDLYVASVLITMYVKCG 384
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
L A+ I + F+ + + Y++ HG L + A + D+ S P ++
Sbjct: 385 DLVRAKG-IFNRFLFKDVVMWNSMITGYSQ-HG---LGEEALNVFHDMCSSGVQPDEV 437
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
N +I Y K G + DAR+VFD M +R++ SW M+ GY G+ +E +LF +M
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM 140
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L N I YG+ G + +AR+VFD+ + R++ SW+ M++ Y ++ + L LF+QM
Sbjct: 19 LCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM 78
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 226/403 (56%), Gaps = 34/403 (8%)
Query: 253 LARLCQEGKVKEAIE-----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G E ++ LM K +K + F ++ C + K++H Y ++
Sbjct: 373 IAGCVQNGLFDEGLKFFRQMLMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 431
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
++ + + +++MY KCG++ AR++FD M R M SW MI G A +G + ++LFE
Sbjct: 432 FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFE 491
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM+ G++PN F+AV +AC A ++EA+ +F SM +FGI+PG EHY + +LG+
Sbjct: 492 QMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRA 551
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---- 483
G L EA FI +P PT W L + R+H ++D+ + ++++DP
Sbjct: 552 GRLEEAYDFI-CGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILL 610
Query: 484 -----------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL 521
+ +K A S ++ ++++ F +P + E +
Sbjct: 611 ANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAM 670
Query: 522 KALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
+ L + M++ YVPDT V HD+++E K+ + HSERLAI +G+I+TPA T +R+ KNL
Sbjct: 671 EVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNL 730
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH A K +S+IVGRE++VRDN RFHHFK+G CSCGDYW
Sbjct: 731 RVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +K D+ ++ L K++H ++ + ++ + + +I+MY KC
Sbjct: 290 EMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCT 349
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ D+ RVF + +R SW+ +I G NGL DEGL+ F QM ++P +F ++
Sbjct: 350 RVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMP 409
Query: 387 ACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
AC + +I I+ LV + KCG++ A+Q ++
Sbjct: 410 ACAHLTTLHLGKQLHGYITRNGFDENIFIAS------SLVDMYAKCGNIRTARQIFDRMR 463
Query: 442 PFEPTAEFWEALRNYARIHG 461
+ + W A+ +HG
Sbjct: 464 LRDMVS--WTAMIMGCALHG 481
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
S+ R++F+ M ++ + SW+ +I G A NGL E L + +M L+P+ T +V
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVL 307
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 231/410 (56%), Gaps = 39/410 (9%)
Query: 251 ADLARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EAI L MD +G + ++ + C K++H S
Sbjct: 364 AMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSS 423
Query: 307 TIRG-DLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYADNGLGDEGL 363
+ L+L N VI MYGKCG++ AR VF+ + RS+ +W MI YA NG+G+E +
Sbjct: 424 PLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAI 483
Query: 364 QLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVG 422
+LF++M G +PN TFL+V SAC +E+A+ HF SM +FG+ P +HY LV
Sbjct: 484 ELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVD 543
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS--- 479
+LG+ G L EA++ + + FE W A + +++GD++ A + + +L+P
Sbjct: 544 LLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVA 603
Query: 480 --------------KADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPT 513
+AD +I + KK S ++ +R+ EF R
Sbjct: 604 GRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLE 663
Query: 514 LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 573
+Y + E+L ++KE+ YVPDT+ VL D+D+E K Q L YHSERLA+A G+ISTP T
Sbjct: 664 IYSELERLH--REIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTT 721
Query: 574 LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR++KNLRVC DCH A K +S+IVGR++IVRD RFHHFKDG CSCGDYW
Sbjct: 722 LRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFEL 286
L+ + ++ P D + ++ A L +G+++ A E++ D + L E
Sbjct: 246 GHLDLAKKSFDRMPQRDSIAFTAMT--AVLSDQGELRGAREMLRYLSAVDVIAWNALLEG 303
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
+ +++ T+ V+ ++ +YGKCG + DARRV D M R+ SW
Sbjct: 304 YSRTGDLDEVRRLFSAMEHRTV-ATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSW 362
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI YA NG E + LF+ M G +P++ T ++V +C + ++S
Sbjct: 363 TAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRS 422
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYA 457
S ++ + GKCG+L A++ E + W A+ R YA
Sbjct: 423 SPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYA 474
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + AK +HD +S + L N +I+++GKCG AR VF+ + + SW
Sbjct: 17 CAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSW 76
Query: 347 HLMINGYADNGLGDEGLQLFEQM 369
+I Y + + LF+ M
Sbjct: 77 SCIIQAYVSSSRIHDARALFDSM 99
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 39/410 (9%)
Query: 251 ADLARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EAI L MD +G + ++ + C K++H S
Sbjct: 306 AMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSS 365
Query: 307 -TIRGDLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYADNGLGDEGL 363
+ L+L N VI MYGKCG++ AR VF+ + RS+ +W MI YA NG+G+E +
Sbjct: 366 PSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAI 425
Query: 364 QLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVG 422
+LF++M G +PN TFL+V AC +E+A+ HF SM +FG+ P +HY LV
Sbjct: 426 ELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVD 485
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS--- 479
+LG+ G L EA++ + + FE W A + +++GD++ A + + +L+P
Sbjct: 486 LLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVA 545
Query: 480 --------------KADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPT 513
+AD +I + KK S ++ +R+ EF R
Sbjct: 546 GRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLE 605
Query: 514 LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 573
+Y + E+L ++KE+ YVPDT+ VL D+D+E K Q L YHSERLA+A G+ISTP T
Sbjct: 606 IYSELERLH--REIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTT 663
Query: 574 LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR++KNLRVC DCH A K +S+IVGR++IVRD RFHHFKDG CSCGDYW
Sbjct: 664 LRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 261 KVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-RGDLVLNNKV 318
+ E + MD +G+K + +L + C + N H + R V+ +
Sbjct: 217 RALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTL 276
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ +YGKCG + DARRV D M R+ SW MI YA NG E + LF+ M G +P++
Sbjct: 277 VNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSD 336
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T ++V +C + ++S S ++ + GKCG+L A++ E
Sbjct: 337 ITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFE 396
Query: 439 QKLPFEPTAEFWEAL-RNYA 457
+ W A+ R YA
Sbjct: 397 CVPLRTRSVVTWTAMIRAYA 416
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ +GV+ +A T C + +K+++ + D + + +I MYG+C
Sbjct: 124 MCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCRE 183
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +A R FD ++ + W MI+ YA N L+L +M G++ T++++ A
Sbjct: 184 IEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDA 243
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLG-LVGVLGKCGHLFEAQQFIEQKLPFEPT 446
C S + + F + G+ + G LV + GKCG + +A++ ++ +P +
Sbjct: 244 CASTMDLRNG-VAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLD-AMPVRTS 301
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
+ + YA+ +G+ A L +D A+P I T IS++D + L
Sbjct: 302 VSWTAMIAAYAQ-NGN---AAEAINLFQCMDLEGAEPSDI--------TLISVVDSCAVL 349
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 18/244 (7%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ +K+H + + L N +++ Y K GS+ A+ F + + SW++++ Y
Sbjct: 49 DEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAY 108
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE-FGISP 412
A NG LF M G++PN T AC +A + E + SE I
Sbjct: 109 AQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDS 168
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
E L+ + G+C + EA++ ++ P E W A+ + A H A EL
Sbjct: 169 HVES--SLITMYGRCREIEEAERAFDRS-P-EKDVVCWTAMIS-AYAHN--WRTSRALEL 221
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTY 532
+ +D + K+ P T +S+LD + ++ RN + ++ A+ + ST
Sbjct: 222 VRRMD---LEGIKLGLP-----TYVSLLDACASTMDLRNGVAFH--QRAAAIGLDRSSTV 271
Query: 533 VPDT 536
V T
Sbjct: 272 VAGT 275
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 217/383 (56%), Gaps = 33/383 (8%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ + ++ +C + ++ K+VH ++S DL + + +I MY KCG++
Sbjct: 332 EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVR 391
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A++VF+ + + W+ MI GY+ +GLG+E L +F M G+ P++ TF+ V SAC
Sbjct: 392 AKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSY 451
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ ++E FE+MK ++ + PG EHY LV +LG+ + EA + +E K+P EP A W
Sbjct: 452 SGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVE-KMPMEPDAIVW 510
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
AL R H +DL + A E + L+P A P +KI
Sbjct: 511 GALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKAR 570
Query: 490 PPKKRTAISILDGKSRLVEFRN---------PTLYRDDEKLKALNQMKESTYVPDTRYVL 540
K S ++ + ++ F P + + EKL L ++E+ Y PD +VL
Sbjct: 571 SVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGL--LREAGYCPDGSFVL 628
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
HD+D+E K +L YHSE+LA+AYGL+ P P+R++KNLRVCGDCH+AIK+++++ GRE
Sbjct: 629 HDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 688
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+I+RD RFHHFKDG CSC DYW
Sbjct: 689 IILRDANRFHHFKDGHCSCKDYW 711
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ N++I +G G + ARRVF M +R +W MI Y G E L LF +M++
Sbjct: 272 VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQR 331
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
GL N + ++V S C S +++ +H + ++SEF + Y+ L+ + KCG
Sbjct: 332 EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF----DQDLYVASVLITMYVKCG 387
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+L A+Q + + P + + + Y++ HG L + A + D+ S
Sbjct: 388 NLVRAKQ-VFNRFPLKDVVMWNSMITGYSQ-HG---LGEEALNVFHDMCSSGV------- 435
Query: 489 PPPKKRTAISILDGKS 504
PP T I +L S
Sbjct: 436 -PPDDVTFIGVLSACS 450
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
++A+K+ D + D+V +I Y + G + +AR +FD M R++ +W M++GY
Sbjct: 165 DDARKLFDMMPEK----DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGY 220
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
A NG D +LFE M + NE ++ A+ + + EA F++M
Sbjct: 221 ARNGKVDVARKLFEVMP----ERNEVSWTAMLLGYTHSGRMREASSLFDAM 267
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I + K G +++ARRVFD M DR++ SW M+ GY NG E +LF M
Sbjct: 90 NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP----H 145
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N ++ + +++A F+ M + ++ ++G + G L EA+
Sbjct: 146 KNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVA-----VTNMIGGYCEEGRLDEARA 200
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
++ +P + + YAR +G +D+ E+M
Sbjct: 201 LFDE-MPKRNVVTWTAMVSGYAR-NGKVDVARKLFEVM 236
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 214/384 (55%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D G+ A F +L + +++H L+ + + + N +I MY +CG
Sbjct: 115 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 174
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +VF+ M DR++ SW MI G+A +G L++F +M + G +PNE T++AV S
Sbjct: 175 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 234
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC I E HF SM E GI P EHY +V +LG+ G L EA +FI +P
Sbjct: 235 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI-NSMPLMAD 293
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTP 489
A W L R+HG+ +L HA E++++ +P D KI
Sbjct: 294 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 353
Query: 490 PPK----KRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYV 539
+ K S ++ ++R+ F +P ++ ++L L +++KE Y+PDT +V
Sbjct: 354 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 413
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHDI++E KEQ L HSE++A+A+GLIST P+RI KNLRVCGDCH AIK +S GR
Sbjct: 414 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 473
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD+ RFHH K+G CSC DYW
Sbjct: 474 EIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY + G M DAR+ FD + ++++ S++ +++GYA N +E LF ++ G
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120
Query: 374 LQPNEQTFLAVFSACGSADAI 394
+ + TF ++ S S A+
Sbjct: 121 IGISAFTFASLLSGAASIGAM 141
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 321 MYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQLFEQMRKLGLQP 376
MY KC GS+ D+R+VF+ M + ++ SW +I Y +G D E ++LF +M +
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC 60
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFE 402
+ +++++ G + +AF I FE
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFE 87
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 221/395 (55%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ EA+ L +GV+ D +L C ++ H Y ++ + G+L
Sbjct: 220 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAG 279
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++++Y KCGS+ A +VFD M ++S+ SW +I G A NG G E L+LF+++ + GL
Sbjct: 280 NALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLM 339
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+E TF+ V AC ++E F +F+ MK E+GI P EHY +V +LG+ G + +A +
Sbjct: 340 PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE 399
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPK 484
FI Q +P +P A W L IHG + L + A ++ L+P A +
Sbjct: 400 FI-QNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQ 458
Query: 485 KIPTPPPKKRTAI----------SILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MK 528
+ +RT + S+++ ++RL EF +P KL + + +K
Sbjct: 459 RWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLK 518
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVP VL DI++E KE AL YHSE++AIA+ LI+T A P+R++KNLRVC DCH
Sbjct: 519 LEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHL 578
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
AIK++S++ RE++VRD RFHHFKDG CSC DYW
Sbjct: 579 AIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 12/194 (6%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+KVH +++ + + N ++ MY CG A ++F+ MA+R++ +W+ +INGYA
Sbjct: 159 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 218
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISP 412
NG +E L LF +M G++P+ T +++ SAC A+ A ++ + + +
Sbjct: 219 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 278
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
G L+ + KCG + +A + ++ E + W +L ++G A EL
Sbjct: 279 GN----ALLDLYAKCGSIRQAHKVFDEME--EKSVVSWTSLIVGLAVNG---FGKEALEL 329
Query: 473 MVDLDPSKADPKKI 486
+L+ P +I
Sbjct: 330 FKELERKGLMPSEI 343
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+ + C M+ A ++F + + ++ +W+ MI GYA++ L+L+ QM ++P+
Sbjct: 80 IFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPD 139
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEA 433
T+ + A + E E + S I G E + LV + CGH A
Sbjct: 140 THTYPFLLKAIAKLMDVREG----EKVHS-IAIRNGFESLVFVQNTLVHMYAACGHAESA 194
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ E L E W ++ N ++G
Sbjct: 195 HKLFE--LMAERNLVTWNSVINGYALNG 220
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 218/385 (56%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ ++ ++ D F ++ C NP+ E K++H +S ++ D+ L N +I MY +CG
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCG 581
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ-PNEQTFLAVF 385
S+ DAR VF + R + SW MI G AD G + ++LF QM+ G + P+ TF ++
Sbjct: 582 SLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSIL 641
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A + E + F SM+SE+G+ P EHY LVG+LG+ EA+ I Q +PF P
Sbjct: 642 SACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQ-MPFPP 700
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------------DPSK--- 480
A WE L RIHG+I L +HA + L D +K
Sbjct: 701 DAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRR 760
Query: 481 -ADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALN-QMKESTYVPDTRY 538
+ + I P + + + + + +P +LK L+ +M+E+ Y PDT++
Sbjct: 761 VMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQH 820
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+ + +E +L HSERLAIAYGLI TP TP+RI KNLR+CGDCH A K +S++VG
Sbjct: 821 VLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVG 880
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I RD+ RFH FK+GKCSC DYW
Sbjct: 881 REIIARDSNRFHSFKNGKCSCEDYW 905
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A L Q G EA E + GV + + + ++ C K E K +H + +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D+ + N +I MY +CG + AR +F M R + SW+ +I GYA E ++L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+QM+ G++P TFL + SAC ++ A + IH + ++S GI L+ +
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYR 477
Query: 426 KCGHLFEAQQFIE 438
+CG L EAQ E
Sbjct: 478 RCGSLMEAQNVFE 490
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+ D + + L + C + AK++H +++ + D+ L+N +I MY KC S+ DA
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VF M R + SW+ +I+ YA G + QLFE+M+ G PN+ T++++ +AC S
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 393 AIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+E IH + +K+ + P ++ L+ + GKCG L A+Q
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVF 186
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ +GVK F L C N Y + K +H+ L+S I+ + L N ++ MY +CG
Sbjct: 421 QMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCG 480
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ +A+ VF+ R + SW+ MI G+A +G + +LF++M+ L+P+ TF +V S
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
C + +A+E +E G+ L+ + +CG L +A+
Sbjct: 541 GCKNPEALELG-KQIHGRITESGLQLDVNLGNALINMYIRCGSLQDAR 587
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G K+A +L ++ G + + ++ C +P EN KK+H +++ + D
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPR 164
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ MYGKCG + AR+VF ++ R + S++ M+ YA E L LF QM G
Sbjct: 165 VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG 224
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P++ T++ + A + ++E + E G++ LV + +CG + A
Sbjct: 225 ISPDKVTYINLLDAFTTPSMLDEG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283
Query: 434 QQ 435
+Q
Sbjct: 284 KQ 285
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 20/259 (7%)
Query: 217 QQVSPGHQ----IPNQLNNVPNNMNQCPAGDQVL----PPSVAD----LARLCQEGKVKE 264
Q + G+Q + N L ++ P QV P V L Q+ VKE
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212
Query: 265 AIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
+ L +G+ D + L + P + K++H ++ + D+ + ++
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
M +CG + A++ F +ADR + ++ +I A +G E + + +MR G+ N T
Sbjct: 273 MCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTT 332
Query: 381 FLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+L++ +AC ++ A+E IH S SE G S + L+ + +CG L +A++
Sbjct: 333 YLSILNACSTSKALEAGKLIH--SHISEDGHSSDVQIGNALISMYARCGDLPKARELF-Y 389
Query: 440 KLPFEPTAEFWEALRNYAR 458
+P + + YAR
Sbjct: 390 TMPKRDLISWNAIIAGYAR 408
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 225/388 (57%), Gaps = 34/388 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE+ +G+K D+ ++ C + E K++H Y ++S ++V+ ++++Y KC
Sbjct: 412 IEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKC 471
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ A+++F+ M ++ + SW MI Y +G G++ L LF +M++ G + + F A+
Sbjct: 472 GNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAIL 531
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+AC A +++ +F+ MKS++G++P EHY LV +LG+ GHL EA I + + EP
Sbjct: 532 TACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGII-KNMSLEP 590
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PK 484
A W AL RIH +I+L + A + + +LDP A K
Sbjct: 591 DANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRK 650
Query: 485 KIPTPPPKKRTAISIL----DGKSRLVEFRNPTLYRDDEKLKAL-----NQMKESTYVPD 535
+ KK+ S++ D ++ LV R + E++ A+ QM+++ YVP+
Sbjct: 651 MMKEKGVKKQPGCSVVAVHRDVQTFLVGDRT---HPQSEQIYAMLEILYEQMRKAGYVPN 707
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T L D+++EAKE L HSE+LAI++G+I+T P+RI+KNLRVC DCHNA K +S+
Sbjct: 708 TNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISK 767
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IVGRE+IVRD RFHH K+G CSCGDYW
Sbjct: 768 IVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D F ++ + CG+ + +KVH+ + D+++ + MY KCGS+ +A
Sbjct: 115 GINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENA 174
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R+VFD M R + SW+ +I GY+ NG E L LF +M+ G++PN T ++V C
Sbjct: 175 RQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHL 234
Query: 392 DAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A+E+ IH +++S GI GLV + KCG++ A + E ++P A W
Sbjct: 235 LALEQGKQIHCYAIRS--GIESDVLVVNGLVNMYAKCGNVNTAHKLFE-RMPIRDVAS-W 290
Query: 451 EAL 453
A+
Sbjct: 291 NAI 293
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 9/216 (4%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G+ EA+ L + G+K ++S ++ +C + E K++H Y ++S
Sbjct: 191 AIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS 250
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I D+++ N ++ MY KCG++ A ++F+ M R + SW+ +I GY+ N E L F
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFF 310
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M+ G++PN T ++V AC A+E+ IH +++S F + + LV +
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN--ALVNMYA 368
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG++ A + E ++P + W A+ + HG
Sbjct: 369 KCGNVNSAYKLFE-RMP-KKNVVAWNAIISGYSQHG 402
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+K ++ ++ C + E +++H Y ++S + V+ N ++ MY KCG++
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNS 375
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A ++F+ M +++ +W+ +I+GY+ +G E L LF +M+ G++P+ ++V AC
Sbjct: 376 AYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAH 435
Query: 391 ADAIEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
A+E+ IH +++S F + GT GLV + KCG++ AQ+ E ++P +
Sbjct: 436 FLALEQGKQIHGYTIRSGFESNVVVGT----GLVDIYAKCGNVNTAQKLFE-RMPEQDVV 490
Query: 448 EFWEALRNYARIHG 461
+ + Y IHG
Sbjct: 491 SWTTMILAYG-IHG 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
W I GY NG ++ L+L+ QM++ G+ P++ FL+V ACGS ++ +H + +
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147
Query: 405 KSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
F + GT L + KCG L A+Q + ++P W A+
Sbjct: 148 ARGFESDVIVGT----ALASMYTKCGSLENARQVFD-RMPKRDVVS-WNAI 192
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 219/404 (54%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L+ Q + +A L D+ GV+ +L LC + K VH Y +
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D +LN +++MY KCG + A R+F R + W+ +I G+A +G G+E L +F
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 448
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M + G++PN+ TF+ + AC A + E FE M FG+ P EHY +V +LG+
Sbjct: 449 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 508
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA + I + +P +P W AL R+H + L + A +++++P
Sbjct: 509 AGLLDEAHEMI-KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVL 567
Query: 479 -------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
+ K + T KK S+++ + EF +P + R +E
Sbjct: 568 MSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEM 627
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L + ++ E+ YVPDT VL +ID+E KE AL YHSE+LA+A+GLIST TP+RI+KN
Sbjct: 628 LAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKN 687
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH A K++S+I GR +IVRD RFHHF++G CSCGDYW
Sbjct: 688 LRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + CG W + K++H + L+ + D+ + N ++ MYG+C + AR VFD M +R
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 188
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-----E 396
+ SW MI + N D L+L +M + ++P+E +++ + +
Sbjct: 189 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLPFEPTAEFWEAL 453
A++ S G+ T L+ + KCGHL A+Q + QK TA +
Sbjct: 249 AYVIRNSNNEHMGVPTTT----ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304
Query: 454 RN 455
R+
Sbjct: 305 RS 306
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING---------------------- 352
+++MY KCG + AR++F+ + +++ SW MI G
Sbjct: 265 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV 324
Query: 353 ---------YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH-- 400
YA D+ LF+QMR G++P + T +++ S C A A++ ++H
Sbjct: 325 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 384
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
+ + E T LV + KCG + A + + + + W A+ +H
Sbjct: 385 IDKERVEVDCILNT----ALVDMYAKCGDINAAGRLFIEAISRDIC--MWNAIITGFAMH 438
Query: 461 G 461
G
Sbjct: 439 G 439
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 219/406 (53%), Gaps = 45/406 (11%)
Query: 259 EGKVKEAIEL----MDKGVKADAS-------CFYTLFELCGNPKWYENAKKVHDYFLQST 307
+G+ ++EL M+KG+K D S ++ CGN + H Y +Q+
Sbjct: 555 DGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTG 614
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
D+++ +++MY KCGS+ AR +FD A + + W MI Y +G G + + LF+
Sbjct: 615 FEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFD 674
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM K G++P+ TF V SAC + +EE ++F+ M EF I+ +Y +V +LG+
Sbjct: 675 QMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRA 734
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI- 486
G L EA IE +P EP A W +L RIH ++DL + + + LDP A +
Sbjct: 735 GQLSEAVDLIEN-MPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLL 793
Query: 487 --------------PTPPPKKRTAISILDGKSRLVEFRNPT---------------LYRD 517
R + + G S LVE+ N LY
Sbjct: 794 SNIYAAKSRWNEVEKVRKMMARRGANKIQGFS-LVEYDNQVHKFGVGDRSHPQWEKLYAK 852
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
E+L A MK YVP T +VLHDI++EAKE AL YHSERLAIA+GLI+T T LRI
Sbjct: 853 LEELAA--PMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRIT 910
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+CGDCHNAIK++S+IV R ++VRD RFH F+DG CSCGDYW
Sbjct: 911 KNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G++ DA + ++ A +H Y ++S ++ + +IE+Y KCGS
Sbjct: 329 MLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGS 388
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM----------RKLGLQPN 377
+ DA ++F M R + W MI Y +G G E L++F+QM ++ +QP
Sbjct: 389 LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQ 448
Query: 378 EQTFLAVFSACGSADAI 394
Q LA+ ++C A I
Sbjct: 449 VQPPLAI-TSCTLATHI 464
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
GDL L N ++ +Y K G A +F M ++ + SW MI YA+N +E L LF +M
Sbjct: 204 GDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEM 263
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEE 396
+ +PN T ++ AC + +EE
Sbjct: 264 IEKRFEPNSVTVVSALQACAVSRNLEE 290
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
LF+ C N + + ++H ++ I D K+ +Y KC S+ AR+VFD +
Sbjct: 10 LFQACNNGR---SVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ W+ + Y +E L+LF M G P+ T AC +E IH
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 401 FESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
+ K++ G++ ++G LV + KCG + EA + E+
Sbjct: 127 GFAKKND---EIGSDMFVGSALVELYSKCGQMGEALKVFEE 164
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 287 CGNPKWYENAKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C + E K +H + ++ I D+ + + ++E+Y KCG M +A +VF+
Sbjct: 113 CAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVL 172
Query: 346 WHLMINGYADNGLGDEGLQLFEQM 369
W M+ GY N +E L LF QM
Sbjct: 173 WTSMVTGYQQNNDPEEALALFSQM 196
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K MY + A VF+ + + W++MI G+A +G L+L+ +M + GL+
Sbjct: 515 TKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLK 574
Query: 376 -------PNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLG 425
PN + L+V ACG+ A+ + + H +++ EF I T ++ +
Sbjct: 575 PDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVAT----AIMDMYS 630
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG----DIDLED 467
KCG L A+ ++ + W A+ IHG IDL D
Sbjct: 631 KCGSLDLARCLFDETAGKDLVC--WSAMIASYGIHGHGRKAIDLFD 674
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 95/229 (41%), Gaps = 11/229 (4%)
Query: 236 MNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYEN 295
M C GD L S+ +L + G K A L K + D + T+ N +
Sbjct: 198 MMDCFDGDLPLVNSLLNL--YAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANE 255
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A + ++ + V ++ ++ + +++ + + SW +++GYA
Sbjct: 256 ALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQ 315
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
NG+ + + +F M G+QP+ + + +A ++A +H ++S F +
Sbjct: 316 NGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF----NS 371
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++G L+ + KCG L +A + + + + W ++ IHG
Sbjct: 372 NVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV--IWSSMIAAYGIHG 418
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 214/384 (55%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D G+ A F +L + +++H L+ + + + N +I MY +CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +VF+ M DR++ SW MI G+A +G L++F +M + G +PNE T++AV S
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC I E HF SM E GI P EHY +V +LG+ G L EA +FI +P
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI-NSMPLMAD 430
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTP 489
A W L R+HG+ +L HA E++++ +P D KI
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 490
Query: 490 PPK----KRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYV 539
+ K S ++ ++R+ F +P ++ ++L L +++KE Y+PDT +V
Sbjct: 491 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 550
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHDI++E KEQ L HSE++A+A+GLIST P+RI KNLRVCGDCH AIK +S GR
Sbjct: 551 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 610
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD+ RFHH K+G CSC DYW
Sbjct: 611 EIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 253 LARLCQEGKVKEAIEL-MD---KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G ++AI+L +D G D + ++ C K++H ++ +
Sbjct: 28 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 87
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D+ + +++MY KC GS+ D+R+VF+ M + ++ SW +I YA +G D E ++
Sbjct: 88 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIE 147
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACG 389
LF +M ++PN +F +V ACG
Sbjct: 148 LFCKMISGHIRPNHFSFSSVLKACG 172
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 263 KEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEAIEL K + F ++ + CGN ++V+ Y ++ I + N +
Sbjct: 143 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 202
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY + G M DAR+ FD + ++++ S++ +++GYA N +E LF ++ G+ +
Sbjct: 203 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 262
Query: 379 QTFLAVFSACGSADAI 394
TF ++ S S A+
Sbjct: 263 FTFASLLSGAASIGAM 278
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A +VFD M +R++ +W LMI +A G + + LF M G P+ T+ +V SAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 214/384 (55%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D G+ A F +L + +++H L+ + + + N +I MY +CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +VF+ M DR++ SW MI G+A +G L++F +M + G +PNE T++AV S
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC I E HF SM E GI P EHY +V +LG+ G L EA +FI +P
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI-NSMPLMAD 425
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTP 489
A W L R+HG+ +L HA E++++ +P D KI
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 485
Query: 490 PPK----KRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYV 539
+ K S ++ ++R+ F +P ++ ++L L +++KE Y+PDT +V
Sbjct: 486 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 545
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHDI++E KEQ L HSE++A+A+GLIST P+RI KNLRVCGDCH AIK +S GR
Sbjct: 546 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 605
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD+ RFHH K+G CSC DYW
Sbjct: 606 EIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 253 LARLCQEGKVKEAIEL-MD---KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G ++AI+L +D G D + ++ C K++H ++ +
Sbjct: 23 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 82
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D+ + +++MY KC GS+ D+R+VF+ M + ++ SW +I YA +G D E ++
Sbjct: 83 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIE 142
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACG 389
LF +M ++PN +F +V ACG
Sbjct: 143 LFCKMISGHIRPNHFSFSSVLKACG 167
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 263 KEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEAIEL K + F ++ + CGN ++V+ Y ++ I + N +
Sbjct: 138 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 197
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY + G M DAR+ FD + ++++ S++ +++GYA N +E LF ++ G+ +
Sbjct: 198 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 257
Query: 379 QTFLAVFSACGSADAI 394
TF ++ S S A+
Sbjct: 258 FTFASLLSGAASIGAM 273
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A +VFD M +R++ +W LMI +A G + + LF M G P+ T+ +V SAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 239/444 (53%), Gaps = 40/444 (9%)
Query: 214 NSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM---- 269
+++ + G+ +++ N ++ P D V A +A Q G EA+ L
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKMPKRDPV--SWAAMIAGYSQSGHSYEALRLFVLME 396
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+G + + S F + C + E K++H ++ + N ++ MY KCGS+
Sbjct: 397 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 456
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+A +F MA + + SW+ MI GY+ +G G+E L+ FE M++ GL+P++ T +AV SAC
Sbjct: 457 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACS 516
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+++ +F +M ++G+ P ++HY +V +LG+ G L EA + + +PFEP A
Sbjct: 517 HTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLM-KNMPFEPDAAI 575
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTPPPK 492
W L +R+HG+ +L + A + + ++P + D K+
Sbjct: 576 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 635
Query: 493 KRTAISILDGKSRLVEFRNPTLY---------RDDEKLKALN----QMKESTYVPDTRYV 539
K + + G S +E +N T DE L +MK++ YV T V
Sbjct: 636 K--GVKKVPGYS-WIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVV 692
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD+++E KE+ + YHSERLA+AYG++ + P+R+IKNLRVC DCHNAIK M+++ GR
Sbjct: 693 LHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGR 752
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
+I+RDN RFHHFKDG CSCGDYW
Sbjct: 753 LIILRDNNRFHHFKDGSCSCGDYW 776
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DLV N +I+ Y + ++ AR +F+ M +R + SW+ +++GYA NG D+ ++F++M
Sbjct: 120 DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMP 179
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ N+ ++ A+ SA +EEA + F S ++ +S L+G K +
Sbjct: 180 ----EKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNC-----LLGGFVKKKKI 230
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
EA+QF + + + + YA+ +G+ID
Sbjct: 231 VEARQFFDS-MKVRDVVSWNTIITGYAQ-NGEID 262
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
F S D+V N +I Y + G + +AR++FD + +W M++GY N + +E
Sbjct: 236 FFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEA 295
Query: 363 LQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP--GTEHYLGL 420
+LF++M + NE ++ A+ + + +E A K F + P + +
Sbjct: 296 RELFDRMP----ERNEVSWNAMLAGYVQGERVEMA-------KELFDVMPCRNVSTWNTM 344
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ +CG + EA+ ++ +P + W A+
Sbjct: 345 ITGYAQCGKISEAKNLFDKMPKRDPVS--WAAM 375
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
LV N ++ + K + +AR+ FD M R + SW+ +I GYA NG DE QLF++
Sbjct: 214 LVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE 270
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 216/388 (55%), Gaps = 26/388 (6%)
Query: 258 QEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ L + + D F ++ +CGN E K++H L+++
Sbjct: 88 QMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSF 147
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I +Y KCG + DA VF + R++ W+ M+ A + ++ LF+QM +G
Sbjct: 148 VGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVG 207
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TFL V AC A +E+ +FE MK E+GI PG +HY +V +LG+ G L +A
Sbjct: 208 MKPNFITFLCVLYACSHAGLVEKGQFYFELMK-EYGIEPGAQHYASMVDLLGRAGKLKDA 266
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
I +K+P EPT W AL RIHGD +L + + +L P +
Sbjct: 267 VSII-KKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGPVSSAAGRYEEAARAR 325
Query: 484 KKIPTPPPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKALNQMKESTYVPD 535
K + KK T +S ++ +R+ F +Y+ E+L +M+ + Y+ D
Sbjct: 326 KMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELG--EEMERAGYIAD 383
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T +VL ++D E K Q + YHSERLAIA+GLIS P P+R++KNLRVCGDCH AIK MS+
Sbjct: 384 TSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSK 443
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR +IVRDN RFH F+DG CSC DYW
Sbjct: 444 CCGRTIIVRDNNRFHRFEDGNCSCRDYW 471
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++D GV+ D F + + CG + + VH + +++ D+ + + +++MY KCG
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR++FD M DR++ SW MI GY+ G +E L+LF+Q L N+ TF +V
Sbjct: 61 IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFE 444
CG++ +E IH +K+ + + ++G L+ + KCG + E + ++P
Sbjct: 121 CGNSTLLELGKQIHGLCLKTSY----DSSSFVGSSLISLYSKCG-VIEDAYLVFHEIPIR 175
Query: 445 PTAEFWEAL 453
W A+
Sbjct: 176 NLG-MWNAM 183
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 225/401 (56%), Gaps = 41/401 (10%)
Query: 257 CQ-EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
CQ E +K +++ G + + S ++ C N + K+VH +S + ++
Sbjct: 206 CQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAG 265
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
++ MY KCG + DA ++F M + + +W+ MI+GYA +G G++ L LF++MR G++
Sbjct: 266 TSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMK 325
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF+AV SAC A ++ +F SM ++G+ +HY +V +LG+ G L EA
Sbjct: 326 PDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVD 385
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
I +K+PF+P + + L RIH +++L + A + +++LDP A
Sbjct: 386 LI-KKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMN 444
Query: 482 -------------DPKKIPTPPPKKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKA 523
D K I TP S ++ KS + EFR+ P L EKL
Sbjct: 445 RWDHVAMVRRSMKDNKVIKTP------GYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNE 498
Query: 524 LN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L +M+ + YVPD Y LHD+ +E K+Q LL HSE+LAIAYGLI P TP+R+ KNLRV
Sbjct: 499 LERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRV 558
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH+A K +S I GR +IVRD RFHHF+ G+CSCGDYW
Sbjct: 559 CGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V +I + K G + A + F+ M +++ +W+ MI GY +N + GL+LF++M +
Sbjct: 161 VVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVE 220
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCG 428
G +PN + +V C + A++ +H KS + I+ GT L+ + KCG
Sbjct: 221 SGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTS----LLSMYCKCG 276
Query: 429 HLFEAQQF 436
L +A +
Sbjct: 277 DLEDAWKL 284
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+ GK+K A +L D+ + D + + + E+A+ +F Q ++ D N
Sbjct: 49 RRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARL---FFDQMPVK-DTASWNT 104
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+I + + G M AR +F M R+ SW+ MI+GY ++G D QLFE
Sbjct: 105 MISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFE 154
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 214/384 (55%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D G+ A F +L + +++H L+ + + + N +I MY +CG
Sbjct: 445 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 504
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +VF+ M DR++ SW MI G+A +G L++F +M + G +PNE T++AV S
Sbjct: 505 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 564
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC I E HF SM E GI P EHY +V +LG+ G L EA +FI +P
Sbjct: 565 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI-NSMPLMAD 623
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTP 489
A W L R+HG+ +L HA E++++ +P D KI
Sbjct: 624 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 683
Query: 490 PPK----KRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYV 539
+ K S ++ ++R+ F +P ++ ++L L +++KE Y+PDT +V
Sbjct: 684 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 743
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHDI++E KEQ L HSE++A+A+GLIST P+RI KNLRVCGDCH AIK +S GR
Sbjct: 744 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 803
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD+ RFHH K+G CSC DYW
Sbjct: 804 EIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + + L + C + ++ K VH +QS + D V+ N +I +Y KCG AR +F
Sbjct: 43 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102
Query: 336 DHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+ M + R + SW M++ +A+N + + + F M +LG PNE F AV AC +A+
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 160
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Query: 253 LARLCQEGKVKEAIEL-MD---KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G ++AI+L +D G D + ++ C K++H ++ +
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D+ + +++MY KC GS+ D+R+VF+ M + ++ SW +I Y +G D E ++
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 340
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACG 389
LF +M ++PN +F +V ACG
Sbjct: 341 LFCKMISGHIRPNHFSFSSVLKACG 365
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 263 KEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEAIEL K + F ++ + CGN ++V+ Y ++ I + N +
Sbjct: 336 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 395
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY + G M DAR+ FD + ++++ S++ +++GYA N +E LF ++ G+ +
Sbjct: 396 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 455
Query: 379 QTFLAVFSACGSADAI 394
TF ++ S S A+
Sbjct: 456 FTFASLLSGAASIGAM 471
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGK 324
+++++ G + CF + C N + + ++ + +++ + D+ + ++I+M+ K
Sbjct: 135 LDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 194
Query: 325 -CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G + A +VFD M +R++ +W LMI +A G + + LF M G P+ T+ +
Sbjct: 195 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 254
Query: 384 VFSAC 388
V SAC
Sbjct: 255 VLSAC 259
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 223/405 (55%), Gaps = 34/405 (8%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + G+ ++ + L ++ GVK +A ++ C N + K+VH +
Sbjct: 233 AMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKC 292
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D ++ MY KCG + DA +F + + + W+ MI+GYA +G G + L+LF
Sbjct: 293 PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLF 352
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M+K GL+P+ TF+AV AC A ++ +F +M+ +FGI EHY +V +LG+
Sbjct: 353 DEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGR 412
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA I + +PF+P + L RIH +++L + A + +++LDP+ A
Sbjct: 413 AGKLSEAVDLI-KSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQ 471
Query: 482 ----------------------DPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDE 519
D + P S++ G R + +P L E
Sbjct: 472 LANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHG-FRSSDRLHPELASIHE 530
Query: 520 KLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
KLK L +MK + YVPD +VLHD+ +E KEQ LL+HSE+LAIA+GL+ P P+R+ K
Sbjct: 531 KLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFK 590
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH+A K +S I GRE+IVRD RFHHFKDG CSC DYW
Sbjct: 591 NLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y K G + A R+F M+ R++ +W+ MI GY +NG ++GL+LF M + G++PN
Sbjct: 203 MITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPN 262
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ +V C + A++ + + +S T LV + KCG L +A +
Sbjct: 263 ALSLTSVLLGCSNLSALQLG-KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELF 321
Query: 438 EQ 439
Q
Sbjct: 322 IQ 323
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQLFEQM 369
+++ +NK+I Y +CG + A RVF+ M +S +W+ ++ +A G + QLFE++
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE-HYLGLVGVLGKCG 428
QPN ++ + + + +A F+SM + S T L VG++G+
Sbjct: 100 P----QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
LF A +P E W A+ + GD+D
Sbjct: 156 RLFSA-------MP-EKNCVSWSAMVSGYVACGDLD 183
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 214/384 (55%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D G+ A F +L + +++H L+ + + + N +I MY +CG
Sbjct: 427 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 486
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +VF+ M DR++ SW MI G+A +G L++F +M + G +PNE T++AV S
Sbjct: 487 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 546
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC I E HF SM E GI P EHY +V +LG+ G L EA +FI +P
Sbjct: 547 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI-NSMPLMAD 605
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTP 489
A W L R+HG+ +L HA E++++ +P D KI
Sbjct: 606 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 665
Query: 490 PPK----KRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYV 539
+ K S ++ ++R+ F +P ++ ++L L +++KE Y+PDT +V
Sbjct: 666 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 725
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHDI++E KEQ L HSE++A+A+GLIST P+RI KNLRVCGDCH AIK +S GR
Sbjct: 726 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 785
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD+ RFHH K+G CSC DYW
Sbjct: 786 EIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + + L + C + ++ K VH +QS + D V+ N +I +Y KCG AR +F
Sbjct: 25 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84
Query: 336 DHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+ M + R + SW M++ +A+N + + + F M +LG PNE F AV AC +A+
Sbjct: 85 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 142
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Query: 253 LARLCQEGKVKEAIEL-MD---KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G ++AI+L +D G D + ++ C K++H ++ +
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D+ + +++MY KC GS+ D+R+VF+ M + ++ SW +I Y +G D E ++
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 322
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACG 389
LF +M ++PN +F +V ACG
Sbjct: 323 LFCKMISGHIRPNHFSFSSVLKACG 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 263 KEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEAIEL K + F ++ + CGN ++V+ Y ++ I + N +
Sbjct: 318 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 377
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY + G M DAR+ FD + ++++ S++ +++GYA N +E LF ++ G+ +
Sbjct: 378 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 437
Query: 379 QTFLAVFSACGSADAI 394
TF ++ S S A+
Sbjct: 438 FTFASLLSGAASIGAM 453
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGK 324
+++++ G + CF + C N + + ++ + +++ + D+ + ++I+M+ K
Sbjct: 117 LDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 176
Query: 325 -CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G + A +VFD M +R++ +W LMI +A G + + LF M G P+ T+ +
Sbjct: 177 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 236
Query: 384 VFSAC 388
V SAC
Sbjct: 237 VLSAC 241
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 222/381 (58%), Gaps = 29/381 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV+++ ++ +C + ++ ++VH ++S D+ + + +I MY KCG +
Sbjct: 324 EGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVK 383
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR++FD + + + W+ +I GYA +GL +E LQ+F +M G+ + TF+ V SAC
Sbjct: 384 ARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSY 443
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++E FESMKS++ + P TEHY +V +LG+ G + +A I QK+P E A W
Sbjct: 444 TGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLI-QKMPVEADAIIW 502
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
AL R H +++L + A + ++ L+P A P + +
Sbjct: 503 GALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVK 562
Query: 490 PPKKRTAISILDGKSRL------VEFRNPTLYRDDEKLKALNQM-KESTYVPDTRYVLHD 542
K S ++ + R+ V ++P L + L+ L+ M +E+ Y PD+ +VLHD
Sbjct: 563 KVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHD 622
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+D+E K ++L +HSERLA+A+GL+ P P+R++KNLRVCGDCH+AIK++++I GRE+I
Sbjct: 623 VDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREII 682
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD RFHHFKDG CSC DYW
Sbjct: 683 LRDANRFHHFKDGFCSCRDYW 703
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 38/218 (17%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYT----------------LFELC---GNPKW----- 292
CQEG++ EA EL D+ + + + T LFE+ W
Sbjct: 182 CQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLM 241
Query: 293 -------YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
E A ++ D + V N +I +G+ G + AR+VFD + ++ +
Sbjct: 242 GYTQGGRIEEASELFDAMPVKAV----VACNAMILGFGQNGEVAKARQVFDQIREKDDGT 297
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
W MI Y G E L LF M++ G+Q N + ++V S C S +++ +H E +
Sbjct: 298 WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV 357
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
KS+F L+ + KCG L +A+Q ++ P
Sbjct: 358 KSQFDSDVFVASV--LITMYVKCGDLVKARQIFDRFSP 393
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V +I Y + G + +AR +FD M R++ SW MI+GY NG D +LFE M
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP 229
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ NE ++ A+ IEEA F++M + + LG G+ G +
Sbjct: 230 ----EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVK-AVVACNAMILG----FGQNGEV 280
Query: 431 FEAQQFIEQ 439
+A+Q +Q
Sbjct: 281 AKARQVFDQ 289
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y K +++AR+ FD M +R++ SW M+ GY GL E LF QM +
Sbjct: 82 NGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP----E 137
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC--GHLFEA 433
N ++ + I+EA + F I P + + G C G L EA
Sbjct: 138 KNVVSWTVMLGGLIQVRRIDEA-------RGLFDIMPVKDVVARTNMISGYCQEGRLAEA 190
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
++ ++ +P + + Y + +G +D+ E+M
Sbjct: 191 RELFDE-MPRRNVISWTTMISGYVQ-NGQVDVARKLFEVM 228
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
N I Y + G + ARRVFD M D+ + SW+ M+ GY N E LF++M
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM 73
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 235/431 (54%), Gaps = 42/431 (9%)
Query: 230 NNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEA----IELMDKGVKADASCFYTLFE 285
N+ N +Q + L S+ LA +G KE+ +E+++ ++ D T+
Sbjct: 663 NDAKNLFDQMEQRNTALWNSI--LAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 720
Query: 286 LCGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
LC + E+ ++H ++ + +VL +++MY KCG++T AR VFD+M +++
Sbjct: 721 LCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIV 780
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW+ MI+GY+ +G E L L+E+M K G+ PNE TFLA+ SAC +EE F SM
Sbjct: 781 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 840
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+ ++ I EHY +V +LG+ G L +A++F+E K+P EP W AL R+H D+D
Sbjct: 841 QEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVE-KMPIEPEVSTWGALLGACRVHKDMD 899
Query: 465 LEDHAEELMVDLDPSKADPKKIPT---------------------PPPKKRTAISILDGK 503
+ A + + +LDP P I + KK +S ++
Sbjct: 900 MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 959
Query: 504 SRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH---DIDQEAKEQAL 552
S + F + +Y + L Q K Y+PDT ++L DI +E +E+ L
Sbjct: 960 SEIQIFHAGSKTHPKTEEIYNNLRHLTL--QSKGLGYIPDTSFILQNVKDIKEEEEEEYL 1017
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
L HSERLA++ GLIS P ++ +R+ KNLR+CGDCH A K +S+I GR +I RD RFHHF
Sbjct: 1018 LQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHF 1077
Query: 613 KDGKCSCGDYW 623
++GKCSCGDYW
Sbjct: 1078 ENGKCSCGDYW 1088
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 16/201 (7%)
Query: 251 ADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A LA QEGK +EA+EL + G++ D F TL LC N + +++H + ++
Sbjct: 448 ALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR 507
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ I ++++ +++ MY +CG + A+ +F+ MA+R+ SW+ MI GY NG E L+L
Sbjct: 508 ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 567
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-----FIHFESMKSEFGISPGTEHYLGL 420
F+QM+ G++P+ + ++ S+C S ++ FI +M+ E GI + L
Sbjct: 568 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE-GILQ-----VVL 621
Query: 421 VGVLGKCGHLFEAQQFIEQKL 441
V + KCG + A + +Q +
Sbjct: 622 VDMYAKCGSMDYAWKVYDQTI 642
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ GV D F + +CG + + K+VH + +GD + N +I+MY KC
Sbjct: 267 MLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD 326
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+VFD M +R+ +W+ +I+ A G ++ L LF +M++ G + N ++ A
Sbjct: 327 EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMA 386
Query: 388 -CGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKL 441
G AD + +H +++ ++ LG LV + KCG + EA Q L
Sbjct: 387 SAGLADIGKGRELHGHLVRNLL----NSDIILGSALVDMYSKCGMVEEAHQVFRSLL 439
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ L + G+K D ++ C + + +++H++ +++T+ + +
Sbjct: 557 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616
Query: 314 LNNKVIEMYGKCGSM-------------------------------TDARRVFDHMADRS 342
L +++MY KCGSM DA+ +FD M R+
Sbjct: 617 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRN 676
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
W+ ++ GYA+ GL E F +M + ++ + T + + + C S A+E +H
Sbjct: 677 TALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHS 736
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+K F ++ LV + KCG + +A+ +
Sbjct: 737 LIIKKGF-VNCSVVLETALVDMYSKCGAITKARTVFD 772
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H + +++ + D++L + +++MY KCG + +A +VF + +R+ S++ ++ GY
Sbjct: 396 GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ 455
Query: 356 NGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACG 389
G +E L+L+ M+ + G+QP++ TF + + C
Sbjct: 456 EGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD---ARRVFD 336
+ +L + C + ++ K +H + + D L K++ +Y + G + D AR++F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
M +R++ +W+ MI YA E L+L+ +MR G ++ TF +V AC
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 57/116 (49%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
+D F ++ + C + +++ +++ + +L + +++ Y + G M DA
Sbjct: 173 SDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTS 232
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
D + S+ +W+ +I GY +E +F++M K+G+ P+ TF + CG+
Sbjct: 233 LDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGA 288
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 246/444 (55%), Gaps = 34/444 (7%)
Query: 211 QARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEA----I 266
Q +S+ + G+ + N ++ P D + ++ +A Q G +EA +
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAI--IAGYAQSGYGEEALHLFV 383
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G + + S F + C E K+VH +++ + + N ++ MY KCG
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ DA VF+ + ++ + SW+ MI GYA +G G E L LFE M+K G+ P++ T + V S
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +++ +F SM ++GI+ ++HY ++ +LG+ G L +AQ + + +PFEP
Sbjct: 504 ACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLM-KNMPFEPD 562
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL +RIHG+ +L + A +++ +++P + +
Sbjct: 563 AATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLR 622
Query: 486 IPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKESTYVPDTRYV 539
+ KK S ++ ++++ F +P R L+ L+ +MK+ YV T+ V
Sbjct: 623 MRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLV 682
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD+++E K L YHSE+LA+A+G+++ PA P+R+IKNLRVC DCHNA+K +S+IVGR
Sbjct: 683 LHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGR 742
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
+I+RD+ RFHHF G+CSCGDYW
Sbjct: 743 LIILRDSHRFHHFNGGQCSCGDYW 766
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ N+L + ++ P D+V ++ ++ Q G++ EA L ++
Sbjct: 206 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM--ISGYAQNGELLEAQRLFEESPV 263
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
D + + + A++V D + + V N +I Y +C M AR +
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQAREL 319
Query: 335 FDHMADRSMDSWHLMINGYADN-------------------------------GLGDEGL 363
F+ M +++ SW+ MI GYA N G G+E L
Sbjct: 320 FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEAL 379
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--L 420
LF +M++ G + N TF + S C A+E +H +K+ G+ G Y+G L
Sbjct: 380 HLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA--GLESGC--YVGNAL 435
Query: 421 VGVLGKCGHLFEAQQFIE 438
+ + KCG++ +A E
Sbjct: 436 LVMYCKCGNIDDAYIVFE 453
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
A L+ Q G VKEA E+ D+ K S L N + E+A+++ +S
Sbjct: 147 AMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR-IEDARRL----FESKAD 201
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+L+ N ++ Y K + DAR +FD M +R SW+ MI+GYA NG E +LFE+
Sbjct: 202 WELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE- 260
Query: 370 RKLGLQPNEQTF--LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
P F A+ S ++EA F+ M + +S + ++ +C
Sbjct: 261 -----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQC 310
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+ +A++ E +P + + + + YA+ +GDI
Sbjct: 311 KRMDQARELFE-AMPCQNVSSWNTMITGYAQ-NGDI 344
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DLV N +I + ++ AR +FD M +R + SW+ M++GYA NG E ++F++M
Sbjct: 110 DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 168
>gi|255578133|ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530566|gb|EEF32444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 548
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 208/342 (60%), Gaps = 22/342 (6%)
Query: 249 SVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
++ +L LC+E KVKEA+E++ ++ V D F L +CG K E AK VHD+ +
Sbjct: 201 TLEELDELCKEKKVKEAVEVLNLLEERRVLVDLPRFLQLMRICGEAKASEEAKVVHDHLV 260
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ + NK++EMYGKCG M A VF+ M R++ +W MI A NGLG++ +
Sbjct: 261 RLQSPLAVSTFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAID 320
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
LF Q ++ GL P+ Q F+ VFSACG + E +HFESMK ++GI P EH++ +V +L
Sbjct: 321 LFSQFKQAGLVPDAQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIVDML 380
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G GHL EA +FIE K+P EP+ + WE+L N +RIHG+++L D +L+ LD S + +
Sbjct: 381 GTIGHLDEALEFIE-KMPMEPSIDVWESLMNLSRIHGNLELGDRCAKLVELLDASHLNEQ 439
Query: 485 KIPTPPPKKRTAIS-----------ILDGKSRLVEFR-----NPTLYRDDEKLKALN-QM 527
P K + ++ +L+ +SR+ E+R +P R L+ L QM
Sbjct: 440 SKAGLVPAKVSNLTKEKDKKPASQNLLEVRSRVHEYRAGDTSHPETDRIYAMLRGLRAQM 499
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
KE Y+P+TR+VLHD+DQE KE ALL HSERLA AYGL+++P
Sbjct: 500 KEHGYIPETRFVLHDVDQECKEDALLSHSERLAAAYGLLTSP 541
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 220/383 (57%), Gaps = 33/383 (8%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV+ + ++ +CG+ ++ ++VH ++S D+ +++ +I MY KCG +
Sbjct: 324 EGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVT 383
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+RVFD + + + W+ +I GYA +G G++ L++F +M G P+E TF+ V SACG
Sbjct: 384 GKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGY 443
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++E FESMKS++ + TEHY +V +LG+ G L EA IE +P E A W
Sbjct: 444 TGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIEN-MPVEADAIVW 502
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
AL + R H ++DL + A + ++ L+PS A P K +
Sbjct: 503 GALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRAR 562
Query: 490 PPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKALNQMKESTYVPDTRYVL 540
K S ++ +++ F + + + EKL A ++E+ Y PD +V+
Sbjct: 563 NVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGA--SLREAGYCPDGSFVM 620
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
HD+D+E K +L +HSE++A+AYGL+ P P+R++KNLRVCGDCH+AIK+++++ GRE
Sbjct: 621 HDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGRE 680
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+I+RD RFHHFKDG CSC D+W
Sbjct: 681 IILRDANRFHHFKDGLCSCRDFW 703
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I +G G + AR VFD M ++ +W +I Y G E L LF M++ G++
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PN + +++ S CGS +++ +H + ++S F + L+ + KCG L +
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSV--LITMYIKCGDLVTGK 385
Query: 435 QFIEQ 439
+ ++
Sbjct: 386 RVFDR 390
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V + +I G +++AR +FD M R++ +W MI+GYA N D +LFE M
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE-FGISPGTEHYLGLVGVLGKCGH 429
NE T+ A+ + I EA F++M + G GL G +GK
Sbjct: 230 ----DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARW 285
Query: 430 LFE 432
+F+
Sbjct: 286 VFD 288
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
N ++ Y K G +++AR+VFD M +R++ SW M+ GY GL DE LF +M
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM 135
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 222/398 (55%), Gaps = 34/398 (8%)
Query: 259 EGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
EG+ +A IE +G++ ++ C E K VH +++ + G++ +
Sbjct: 187 EGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFV 246
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG- 373
+ +++MYGKCGS+ DA R FD M +R++ +W+ MI GYA G D + LF++M
Sbjct: 247 GSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 306
Query: 374 -LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ PN TF+ V SAC A ++ FESM+ +GI PG EHY +V +LG+ G + +
Sbjct: 307 RVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ 366
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------- 478
A QFI +K+P PT W AL +++ G +L A + + +LDP
Sbjct: 367 AYQFI-KKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFA 425
Query: 479 -------SKADPKKIPTPPPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----N 525
+ K++ KK S + + + F+ T + + +++A+
Sbjct: 426 AAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRG 485
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+M+ + Y+PDT + L D+++E K + YHSE++A+A+GLIS PA P+RI KNLR+CGD
Sbjct: 486 EMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGD 545
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH+AIK +S IVGRE+IVRDN FH F+D +CSC DYW
Sbjct: 546 CHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K+VH +++ D+ + +MY K G +AR++FD M +R++ +W+ ++
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPG 413
G D+ L F + RK G++P + +V SAC +E +H ++K+ I G
Sbjct: 188 GRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 247
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ LV + GKCG + +A++ ++
Sbjct: 248 S----ALVDMYGKCGSIEDAERAFDE 269
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY K A+ + +RS+ +W +I G NG L F MR+ +Q
Sbjct: 46 NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQ 105
Query: 376 PNEQTFLAVFSACGS 390
PN+ TF F A GS
Sbjct: 106 PNDFTFPCAFKASGS 120
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 222/404 (54%), Gaps = 35/404 (8%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L ++ V EAIE + KG+ T+ +C + K++H ++ST
Sbjct: 251 IAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA 310
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D + N +++MY KCG+M RRVF+ M + + SW+ +I GYA NG E ++ F++
Sbjct: 311 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQE 370
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M G P+ TF+A+ S C A ++ FE MK ++GISP EHY LV VLG+ G
Sbjct: 371 MICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAG 430
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
+ EA + + + +PF+PT W +L N R+HG++ L + + + +L+P+ A
Sbjct: 431 RIKEALEIV-KNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLS 489
Query: 482 ---------DPKKIPTPPPKKR-----TAISILDGKSRL--------VEFRNPTLYRDDE 519
+ K+ +KR S L KS++ EFRN Y+
Sbjct: 490 NIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVW 549
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
K + + M+E YVPDT VLHD+ +E + + HSERLA + LI+T + P+RI KN
Sbjct: 550 K-RLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKN 608
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH+ +K +S++ GR +++RD RFHHFKDG CSC DYW
Sbjct: 609 LRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + + + VH L++T D V+NN ++ +Y + G +A RVFD M
Sbjct: 181 FSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMP 240
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
R++ SW+ +I G E ++ F M+ G+ + T + C A+
Sbjct: 241 HRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKE 300
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
IH +KS P LV + KCG +
Sbjct: 301 IHAVIVKST--AKPDAPVLNSLVDMYAKCGAM 330
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 226/394 (57%), Gaps = 36/394 (9%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA+EL D+G+ A A F +L + +++H ++S ++ + + N +
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY +CG++ A +VF+ M DR++ SW +I G+A +G + L+LF +M + G++PNE
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T++AV SAC + E + HF+SM +E G+ P EHY +V +LG+ G L EA QFI
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFI- 637
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------SKAD 482
+P++ A W R+HG+++L HA +++++ +P SK D
Sbjct: 638 NSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWD 697
Query: 483 PKKIPTPPPKKRTAISILDGKSRLVEFRNPT--LYRDD----------EKLKALN-QMKE 529
K++ I + VE N Y D ++L+ L+ ++K+
Sbjct: 698 EVSNIRKAMKEKXLIK--EAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKK 755
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVP+ +VLHD+++E KE+ L HSE++A+A+GLIST P+R+ KNLR+CGDCH+A
Sbjct: 756 LGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSA 815
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK +S GRE+IVRD RFHH KDG+CSC +YW
Sbjct: 816 IKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 253 LARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ RL Q G EAI+L + G + D + C N + +++H ++ +
Sbjct: 243 ITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D + +I MY KC GSM AR++FD + D ++ SW MI GY G D E L
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIH 400
LF M + PN TF + AC + A+ E+ F H
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 254 ARLCQE---GKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
RL QE G++ +AI ++ +G D + + C + ++ VH+ QS
Sbjct: 36 GRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQS 95
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQL 365
++ D V N +I +Y KCG A +F M + R + SW M++ +A+N +G L
Sbjct: 96 DLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLT 155
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F M + G PNE F A AC +A+ +
Sbjct: 156 FVDMIENGYYPNEYCFAAATRACSTAEFV 184
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + + C N ++V + ++ + N +I MY + G + DAR+ FD +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
++++ S++ +I+ YA N +E L+LF ++ G+ + TF ++ S S I +
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
IH +KS ++ + L+ + +CG++ A Q E
Sbjct: 499 IHARVIKSGLKLNQSVCN--ALISMYSRCGNIESAFQVFE 536
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGK 324
+++++ G + CF C ++ + + +++ ++ D+ + +I+M+ K
Sbjct: 157 VDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK 216
Query: 325 C-GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G + A +VF+ M +R+ +W LMI G E + LF M G +P+ T
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSG 276
Query: 384 VFSACGSADAI 394
V SAC + + +
Sbjct: 277 VISACANMELL 287
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 219/404 (54%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L+ Q + +A L D+ GV+ +L LC + K VH Y +
Sbjct: 369 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 428
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D +LN +++MY KCG + A R+F R + W+ +I G+A +G G+E L +F
Sbjct: 429 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 488
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M + G++PN+ TF+ + AC A + E FE M FG+ P EHY +V +LG+
Sbjct: 489 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 548
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA + I + +P +P W AL R+H + L + A +++++P
Sbjct: 549 AGLLDEAHEMI-KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVL 607
Query: 479 -------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
+ K + T KK S+++ + EF +P + R +E
Sbjct: 608 MSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEM 667
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L + ++ E+ YVPDT VL +ID+E KE AL YHSE+LA+A+GLIST TP+RI+KN
Sbjct: 668 LAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKN 727
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH A K++S+I GR +IVRD RFHHF++G CSCGDYW
Sbjct: 728 LRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+L CG + K++H Y L++ L L +++MYGKC + +AR +FD
Sbjct: 301 MLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQ 360
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
+R + W M++ YA D+ LF+QMR G++P + T +++ S C A A++ +
Sbjct: 361 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKW 420
Query: 399 IH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
+H + + E T LV + KCG + A + + + + W A+
Sbjct: 421 VHSYIDKERVEVDCILNT----ALVDMYAKCGDINAAGRLFIEAISRDIC--MWNAIITG 474
Query: 457 ARIHG 461
+HG
Sbjct: 475 FAMHG 479
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + CG W + K++H + L+ + D+ + N ++ MYG+C + AR VFD M +R
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-----E 396
+ SW MI + N D L+L +M + ++P+E +++ + +
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLPFEPTAEFWEAL 453
A++ S G+ T L+ + KCGHL A+Q + QK TA +
Sbjct: 219 AYVIRNSNNEHMGVPTTT----ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 454 RN 455
R+
Sbjct: 275 RS 276
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+++MY KCG + AR++F+ + +++ SW MI G + +EG +LF +M++ +
Sbjct: 235 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENI 294
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PNE T L++ CG A++ +H +++ F +S LV + GKC + A
Sbjct: 295 FPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALAT--ALVDMYGKCSDIRNA 352
Query: 434 QQFIEQKLPFEPT----AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP 489
+ F+ T W A+ L +A+ +D + D +
Sbjct: 353 RAL------FDSTQNRDVMIWTAM-----------LSAYAQANCIDQAFNLFDQMRTSGV 395
Query: 490 PPKKRTAISIL 500
P K T +S+L
Sbjct: 396 RPTKVTIVSLL 406
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 246/444 (55%), Gaps = 34/444 (7%)
Query: 211 QARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEA----I 266
Q +S+ + G+ + N ++ P D + ++ +A Q G +EA +
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAI--IAGYAQSGYGEEALHLFV 302
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G + + S F + C E K+VH +++ + + N ++ MY KCG
Sbjct: 303 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 362
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ DA VF+ + ++ + SW+ MI GYA +G G E L LFE M+K G+ P++ T + V S
Sbjct: 363 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 422
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +++ +F SM ++GI+ ++HY ++ +LG+ G L +AQ + + +PFEP
Sbjct: 423 ACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLM-KNMPFEPD 481
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL +RIHG+ +L + A +++ +++P + +
Sbjct: 482 AATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLR 541
Query: 486 IPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKESTYVPDTRYV 539
+ KK S ++ ++++ F +P R L+ L+ +MK+ YV T+ V
Sbjct: 542 MRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLV 601
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD+++E K L YHSE+LA+A+G+++ PA P+R+IKNLRVC DCHNA+K +S+IVGR
Sbjct: 602 LHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGR 661
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
+I+RD+ RFHHF G+CSCGDYW
Sbjct: 662 LIILRDSHRFHHFNGGQCSCGDYW 685
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ N+L + ++ P D+V ++ ++ Q G++ EA L ++
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM--ISGYAQNGELLEAQRLFEESPV 182
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
D + + + A++V D + + V N +I Y +C M AR +
Sbjct: 183 RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQAREL 238
Query: 335 FDHMADRSMDSWHLMINGYADN-------------------------------GLGDEGL 363
F+ M +++ SW+ MI GYA N G G+E L
Sbjct: 239 FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEAL 298
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--L 420
LF +M++ G + N TF + S C A+E +H +K+ G+ G Y+G L
Sbjct: 299 HLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA--GLESGC--YVGNAL 354
Query: 421 VGVLGKCGHLFEAQQFIE 438
+ + KCG++ +A E
Sbjct: 355 LVMYCKCGNIDDAYIVFE 372
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A L+ Q G VKEA E+ D+ ++ + + E+A+++ +S
Sbjct: 66 AMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRL----FESKADW 121
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L+ N ++ Y K + DAR +FD M +R SW+ MI+GYA NG E +LFE+
Sbjct: 122 ELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE-- 179
Query: 371 KLGLQPNEQTF--LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
P F A+ S ++EA F+ M + +S + ++ +C
Sbjct: 180 ----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCK 230
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+ +A++ E +P + + + + YA+ +GDI
Sbjct: 231 RMDQARELFE-AMPCQNVSSWNTMITGYAQ-NGDI 263
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
AR +FD M +R + SW+ M++GYA NG E ++F++M
Sbjct: 49 ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 87
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 218/394 (55%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + + +++ D GV+ + +L LC + K H Y + + D++L
Sbjct: 313 CIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKT 372
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I+MY KCG ++ A+R+F DR + +W++M+ GY +G G++ L+LF +M LG++P
Sbjct: 373 ALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKP 432
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N+ TF+ AC A + E FE M +FG+ P EHY +V +LG+ G L EA +
Sbjct: 433 NDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKM 492
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD-------------- 482
IE +P P W A+ +IH + ++ + A ++ L+P
Sbjct: 493 IES-MPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANR 551
Query: 483 -------PKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ-MKE 529
K + KK +S ++ + +F+ +P + + E L +++ +KE
Sbjct: 552 WNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKE 611
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ Y+PDT VLH+ID+E KE AL YHSE+LA+A+GLIST TP+R++KNLR+C DCH
Sbjct: 612 AGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTV 671
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I R +IVRD RFHHF++G CSCG YW
Sbjct: 672 TKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ ++++ V + +L CG + K++H Y L++ L L +++MYGKC
Sbjct: 221 VRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKC 280
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR +FD M ++ + +W MI+ YA D QLF QMR G++PNE T +++
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
S C A++ F + + G+ L+ + KCG + AQ+ + + +
Sbjct: 341 SLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDI 399
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W + +HG + A +L +++ P I
Sbjct: 400 CT--WNVMMAGYGMHG---YGEKALKLFTEMETLGVKPNDI 435
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
++ D+ ++ + C K++H + +++ + D+ + N +++MY +CGS+ AR
Sbjct: 105 IEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSAR 164
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLG----------------------DEGLQLFEQMR 370
+FD M++R + SW MI Y G +EG +LF +M
Sbjct: 165 LLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ + PN+ T L++ +CG A++ +H +++ FG+S LV + GKCG
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA--TALVDMYGKCGE 282
Query: 430 LFEAQQFIE 438
+ A+ +
Sbjct: 283 IRSARAIFD 291
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 224/399 (56%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G++ EAI+ K +K D+ ++ AK +H +++ + ++
Sbjct: 455 QNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVF 514
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG++ AR++FD M +R + +W+ MI+GY +GLG L+LFE+M+K
Sbjct: 515 VATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEV 574
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PNE TFL V SAC + +EE F +F SMK ++G+ P +HY +V +LG+ L EA
Sbjct: 575 IKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEA 634
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
FI QK+P EP + A+ RIH +++L + A + DLDP
Sbjct: 635 WDFI-QKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYAT 693
Query: 482 -----DPKKIPTPPPKKRT----AISILDGKSRLVEFRNPT--------LYRDDEKLKAL 524
++ T KK S+++ ++ + F + T +Y E L
Sbjct: 694 ASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLG-- 751
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
N++K + Y+PDT V HD++ KEQ L HSE+LAIA+ L++T T + + KNLRVCG
Sbjct: 752 NRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCG 810
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K +S + RE+IVRD +RFHHFKDG CSCGDYW
Sbjct: 811 DCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ F L ++CG+ K++H + + ++ V+ MY KC + +A
Sbjct: 170 GVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEA 229
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
++FD M +R + W+ +I+GYA NG G L+L +M++ G +P+ T +++ A
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 289
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++ IH SM++ G LV + KCG + A+ ++
Sbjct: 290 GSLRIGRSIHGYSMRA--GFESFVNVSTALVDMYSKCGSVGTARLIFDR 336
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G K A+EL+ ++G + D+ ++ + + +H Y +++ +
Sbjct: 253 QNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVN 312
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ +++MY KCGS+ AR +FD M +++ SW+ MI+GY NG +++F++M
Sbjct: 313 VSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQ 372
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++ T + AC +E+ F+H + E G + L+ + KC +
Sbjct: 373 VEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMN--SLISMYSKCKRVDI 430
Query: 433 AQQFIE 438
A + E
Sbjct: 431 AAEIFE 436
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 8/221 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++MD+ V+ C + E + VH Q + D+ + N +I MY KC
Sbjct: 367 KMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCK 426
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +F+++ +++ SW+ MI GYA NG +E + F +M+ ++P+ T ++V
Sbjct: 427 RVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIP 486
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
A + +A +IH +++ + LV + KCG + A++ + + E
Sbjct: 487 ALAELSVLPQAKWIHGLVIRT--CLDKNVFVATALVDMYAKCGAVHTARKLFD--MMDER 542
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W A+ + HG L A EL + P ++
Sbjct: 543 HVTTWNAMIDGYGTHG---LGKAALELFEKMKKEVIKPNEV 580
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYF---LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
L ELC + K++H + +++ + + + K++ ++ K GS+ +A RVF +
Sbjct: 83 LLELC------TSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIE 136
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAF 398
D+ + +H M+ GYA N D+ + F +MR G++P F + CG +AD +
Sbjct: 137 DKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKE 196
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
IH + + + G + G+V + KC + EA + ++
Sbjct: 197 IHCQLIVN--GFASNVFAMTGVVNMYAKCRLVEEAYKMFDR 235
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 217/387 (56%), Gaps = 34/387 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKC 325
++M +G+ DA + C ++ A VH L+ + +I++Y KC
Sbjct: 199 QMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKC 258
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GS+T AR+VFD M +R++ +W MI+GY +G G E L LF+QM K ++P+ TF+++
Sbjct: 259 GSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSIL 317
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC + + E + F SM +FG++P EHY +V +LG+ G L EA FIE ++P P
Sbjct: 318 SACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIE-RMPVRP 376
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPT 488
A W AL RIH ++DL + + DLDP A + I T
Sbjct: 377 NAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRT 436
Query: 489 PPP----KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
KK S+++ K++L F + +Y + E+L ++++++ Y PD
Sbjct: 437 LMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERL--MDRIRQEGYTPDI 494
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
+VLHD+D+E KE L HSE+LAI +GL++ + +RI KNLRVCGDCH A K +S++
Sbjct: 495 NFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKV 554
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE++VRD RFHHFK+G CSC DYW
Sbjct: 555 TGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 14/212 (6%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+E A V+ +++ + D + + M+ +CG + AR++FD + + + +W I
Sbjct: 124 HEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEA 183
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
Y + E L L +QM G+ P+ T L V AC + + + A I + + F +
Sbjct: 184 YVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQ 243
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
L+ + KCG L A++ + E W A+ + +HG E
Sbjct: 244 LLAVETALIDLYVKCGSLTYARKVFDGMQ--ERNIITWSAMISGYGMHG------WGREA 295
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
+ D KA K P T +SIL S
Sbjct: 296 LNLFDQMKASVK------PDHITFVSILSACS 321
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G++ D F + + C + +E ++H ++ + + ++N +I MYGKC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+R+VFD M D++ SW +I + EG LF QM G +P+ L +
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
S + ++ + + E G+ G+ +CG + A++ +
Sbjct: 121 VRSHEEADDVY----RVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFD 167
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 220/386 (56%), Gaps = 35/386 (9%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
LM K +K + F ++ C + K++H Y ++ ++ + + +++MY KCG+
Sbjct: 332 LMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN 390
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A+++FD M R M SW MI G A +G + ++LFEQM G++PN F+AV +A
Sbjct: 391 IRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTA 450
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C ++EA+ +F SM +FGI+PG EHY + +LG+ G L EA FI + PT
Sbjct: 451 CSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI-CGMHIGPTG 509
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPS------------------------KADP 483
W L + R+H +ID+ + ++++DP+ +A
Sbjct: 510 SIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASM 569
Query: 484 KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTR 537
++I +K A S ++ K+++ F +P + E ++ L + M++ YVPDT
Sbjct: 570 RRIGI---RKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTS 626
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
V HD+++E K+ + HSERLAI +G+I+TPA +R+ KNLRVC DCH A K +S+IV
Sbjct: 627 EVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIV 686
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE++VRDN RFHHFK+G CSCGDYW
Sbjct: 687 GREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +K D+ ++ L K++H ++ + D+ + + +I+MY KC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ D+ RVF + +R SW+ +I G NGL DEGL+ F QM ++P +F ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 387 ACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
AC + +I I+ LV + KCG++ A+Q ++
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIAS------SLVDMYAKCGNIRTAKQIFDRMR 402
Query: 442 PFEPTAEFWEALRNYARIHG 461
+ + W A+ +HG
Sbjct: 403 LRDMVS--WTAMIMGCALHG 420
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 32/152 (21%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK- 324
I ++ G+ D + F ++ + C + +H Y ++ + DL N ++ MY K
Sbjct: 95 IGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKL 154
Query: 325 ------------CGSMTD-------------------ARRVFDHMADRSMDSWHLMINGY 353
G + D R++F+ M ++ + SW+ +I G
Sbjct: 155 RFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGN 214
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
A NGL +E L++ +M L+P+ T +V
Sbjct: 215 ARNGLYEETLRMIREMGGANLKPDSFTLSSVL 246
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 238/444 (53%), Gaps = 40/444 (9%)
Query: 214 NSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM---- 269
+++ + G+ +++ N ++ P D V A +A Q G EA+ L
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPV--SWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+G + + S F + C + E K++H ++ + N ++ MY KCGS+
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+A +F MA + + SW+ MI GY+ +G G+ L+ FE M++ GL+P++ T +AV SAC
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+++ +F +M ++G+ P ++HY +V +LG+ G L +A + + +PFEP A
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM-KNMPFEPDAAI 580
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTPPPK 492
W L +R+HG+ +L + A + + ++P + D K+
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 493 KRTAISILDGKSRLVEFRNPTLY---------RDDEKLKALNQ----MKESTYVPDTRYV 539
K + + G S +E +N T DE L + MK++ YV T V
Sbjct: 641 K--GVKKVPGYS-WIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVV 697
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD+++E KE+ + YHSERLA+AYG++ + P+R+IKNLRVC DCHNAIK M+RI GR
Sbjct: 698 LHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGR 757
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
+I+RDN RFHHFKDG CSCGDYW
Sbjct: 758 LIILRDNNRFHHFKDGSCSCGDYW 781
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+E A+K+ D + DLV N +I+ Y + ++ AR +F+ M +R + SW+ M++G
Sbjct: 111 FELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG 166
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
YA NG D+ +F++M + N+ ++ A+ SA +EEA + F+S ++ +S
Sbjct: 167 YAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIE 438
L+G K + EA+QF +
Sbjct: 223 NC-----LLGGFVKKKKIVEARQFFD 243
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
F S D+V N +I Y + G + +AR++FD + + +W M++GY N + +E
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 363 LQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP--GTEHYLGL 420
+LF++M + NE ++ A+ + + +E A K F + P + +
Sbjct: 301 RELFDKMP----ERNEVSWNAMLAGYVQGERMEMA-------KELFDVMPCRNVSTWNTM 349
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ +CG + EA+ ++ +P + W A+
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVS--WAAM 380
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
LV N ++ + K + +AR+ FD M R + SW+ +I GYA +G DE QLF++
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 246/464 (53%), Gaps = 59/464 (12%)
Query: 196 RSPNQWNNQ-----QNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSV 250
R+ + WN QN G QAR + + P D V ++
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMM--------------------PQRDCVSWAAI 362
Query: 251 ADLARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
++ Q G +EA +E+ G ++ S F C + E K+VH +++
Sbjct: 363 --ISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKA 420
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ N ++ MY KCGS +A VF+ + ++ + SW+ MI GYA +G G + L LF
Sbjct: 421 GFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLF 480
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E M+K G++P+E T + V SAC + I+ +F SM ++ + P ++HY ++ +LG+
Sbjct: 481 ESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGR 540
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--- 483
G L EA+ + + +PF+P A W AL +RIHG+ +L + A E++ ++P +
Sbjct: 541 AGRLEEAENLM-RNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 599
Query: 484 ------------------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEK 520
K+ +K T S ++ ++++ F +P R
Sbjct: 600 LSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAF 659
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L+ L+ +M+ YV T+ VLHD+++E KE L YHSE+LA+A+G+++ PA P+R++KN
Sbjct: 660 LEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKN 719
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCHNAIK +S+IVGR +I+RD+ RFHHF +G CSCGDYW
Sbjct: 720 LRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D++ N +I Y + G ++ A+R+F+ R + +W M++GY NG+ DE + F++M
Sbjct: 231 DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM 289
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 34/155 (21%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN------------------------ 351
N ++ Y + M A +F+ M R++ SW+ MI
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV 357
Query: 352 -------GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFES 403
GYA NG +E L +F +M++ G N TF S C A+E +H +
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV 417
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+K+ G G L+G+ KCG EA E
Sbjct: 418 VKA--GFETGCFVGNALLGMYFKCGSTDEANDVFE 450
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ Y + + +A ++FD M + + SW+ M++GYA NG DE ++F +M
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP 166
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
N ++ + +A ++EA FES + IS L+G K L
Sbjct: 167 ----HRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNC-----LMGGYVKRNML 217
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+A+Q + ++P + + YA++ GD+
Sbjct: 218 GDARQLFD-RMPVRDVISWNTMISGYAQV-GDL 248
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y + + AR +FD M +R + SW++M+ GY N E +LF+ M K
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPK---- 136
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ ++ A+ S ++EA F M IS + GL+ G L EA++
Sbjct: 137 KDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSIS-----WNGLLAAYVHNGRLKEARR 191
Query: 436 FIEQKLPFEPTAEFWEAL 453
E + +E + W L
Sbjct: 192 LFESQSNWELIS--WNCL 207
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 220/394 (55%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E ++ IE+ G + S F + C + E ++H +++ + N
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG+M DAR F+ M +R + SW+ MI GYA +G G E L++F+ MR +P
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
++ T + V +AC + +E+ +F SM +FG++ EHY ++ +LG+ G L EA
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------- 481
+ + +PFEP + W AL +RIH + +L A E + +L+P A
Sbjct: 543 M-KDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 601
Query: 482 --DPKKIPTPPP----KKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKE 529
D +K+ KK S ++ ++++ F ++ + EK+ A +MK+
Sbjct: 602 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKK 661
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YV T VLHD+++E KE L YHSE+LA+AYG+++ P P+R+IKNLRVCGDCHNA
Sbjct: 662 AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNA 721
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S I GR +++RD+ RFHHF+ G CSCGDYW
Sbjct: 722 FKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y + G + +A+ VFD M + SW M+ Y+ G +E LQLF +M + G
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
N F V S C A+E +H +++ +G+ ++G L+ + KCG++ +
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC----FVGNALLAMYFKCGNMED 436
Query: 433 AQQFIEQ 439
A+ E+
Sbjct: 437 ARNAFEE 443
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q GK+ EA EL D+ D + + A+++ D + +R D+
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTA 260
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP- 376
V+ Y + G + +ARRVFD M +R+ SW+ M+ Y + DE +LF M P
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------PC 314
Query: 377 -NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-----------TEHYLGLVGVL 424
N ++ + + A +EEA F++M + +S +E L L +
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 425 GKCGHLFEAQQF 436
G+CG F
Sbjct: 375 GRCGEWVNRSAF 386
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA + G+V+EA L + + DA + L + G +W + + F + R D+
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDAISWNAL--MSGYVQW-GKMSEARELFDRMPGR-DV 224
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
V N ++ Y + G M +ARR+FD R + +W +++GYA NG+ +E ++F+ M
Sbjct: 225 VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 220/394 (55%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E ++ IE+ G + S F + C + E ++H +++ + N
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG+M DAR F+ M +R + SW+ MI GYA +G G E L++F+ MR +P
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
++ T + V +AC + +E+ +F SM +FG++ EHY ++ +LG+ G L EA
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------- 481
+ + +PFEP + W AL +RIH + +L A E + +L+P A
Sbjct: 543 M-KDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 601
Query: 482 --DPKKIPTP----PPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKE 529
D +K+ KK S ++ ++++ F ++ + EK+ A +MK+
Sbjct: 602 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKK 661
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YV T VLHD+++E KE L YHSE+LA+AYG+++ P P+R+IKNLRVCGDCHNA
Sbjct: 662 AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNA 721
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S I GR +++RD+ RFHHF+ G CSCGDYW
Sbjct: 722 FKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y + G + +A+ VFD M + SW M+ Y+ G +E LQLF +M + G
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
N F V S C A+E +H +++ +G+ ++G L+ + KCG++ +
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC----FVGNALLAMYFKCGNMED 436
Query: 433 AQQFIEQ 439
A+ E+
Sbjct: 437 ARNAFEE 443
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q GK+ EA EL D+ D + + A+++ D + +R D+
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTA 260
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP- 376
V+ Y + G + +ARRVFD M +R+ SW+ M+ Y + DE +LF M P
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------PC 314
Query: 377 -NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-----------TEHYLGLVGVL 424
N ++ + + A +EEA F++M + +S +E L L +
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 425 GKCGHLFEAQQF 436
G+CG F
Sbjct: 375 GRCGEWVNRSAF 386
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA + G+V+EA L + + D + L + G +W + + F + R D+
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDVISWNAL--MSGYVQW-GKMSEARELFDRMPGR-DV 224
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
V N ++ Y + G M +ARR+FD R + +W +++GYA NG+ +E ++F+ M
Sbjct: 225 VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 217/390 (55%), Gaps = 37/390 (9%)
Query: 263 KEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
KE IE D V ++ C E K VH +++ + G++ + + +++MY
Sbjct: 303 KEGIEPTDFMVS-------SVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMY 355
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG--LQPNEQT 380
GKCGS+ DA R FD M +R++ +W+ MI GYA G D + LF++M + PN T
Sbjct: 356 GKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVT 415
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
F+ V SAC A ++ FESM+ +GI PG EHY +V +LG+ G + +A QFI +K
Sbjct: 416 FVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFI-KK 474
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------S 479
+P PT W AL +++ G +L A + + +LDP +
Sbjct: 475 MPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEA 534
Query: 480 KADPKKIPTPPPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKESTYV 533
K++ KK S + + + F+ T + + +++A+ +M+ + Y+
Sbjct: 535 TLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYI 594
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
PDT + L D+++E K + YHSE++A+A+GLIS PA P+RI KNLR+CGDCH+AIK +
Sbjct: 595 PDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFI 654
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S IVGRE+IVRDN FH F+D +CSC DYW
Sbjct: 655 SGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 259 EGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
EG+ +A IE +G + + F C + +++H + LQS D+ +
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I+ YGKC + + +F ++ + SW MI Y N ++ +F + RK G+
Sbjct: 247 ANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGI 306
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLF 431
+P + +V SAC +E +H ++K+ I G+ LV + GKCG +
Sbjct: 307 EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGS----ALVDMYGKCGSIE 362
Query: 432 EAQQFIEQ 439
+A++ ++
Sbjct: 363 DAERAFDE 370
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K+VH +++ D+ + +MY K G +AR++FD M +R++ +W+ ++
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
G D+ L F + R G +PN TF A +AC A + +H ++S F
Sbjct: 188 GRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA 247
Query: 416 HYLGLVGVLGKC 427
+ GL+ GKC
Sbjct: 248 N--GLIDFYGKC 257
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY K A+ + +RS+ +W +I G NG L F MR+ +Q
Sbjct: 46 NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQ 105
Query: 376 PNEQTFLAVFSACGS 390
PN+ TF F A GS
Sbjct: 106 PNDFTFPCAFKASGS 120
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 219/394 (55%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E +K E+ + GV D F N E +++H ++ DL + N
Sbjct: 1332 CGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTN 1391
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++MYGKCG M D ++ +RS SW+++I+ +A +G + + F +M KLG +P
Sbjct: 1392 AAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKP 1451
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+++ SAC ++E +++SM EFG+ PG EH + ++ +LG+ G L A+ F
Sbjct: 1452 DHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 1511
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------- 483
I++ +P P W +L RIHG+++L E +++LDPS
Sbjct: 1512 IKE-MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 1570
Query: 484 --------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQM-KE 529
K++ + KK+ A S + K ++ F +P R KL L +M KE
Sbjct: 1571 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 1630
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVPDT + LHD+D+E KE L HSERLA+A+GLI+TP + LRI KNLRVCGDCH+
Sbjct: 1631 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1690
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S IVGR++++RD RFHHF GKCSCGDYW
Sbjct: 1691 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ + D ++ +C N + ++H + L+ D+ + N +I+MY K G
Sbjct: 324 EMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA+R FD M ++++ SW +I+GYA +G G + L+++M G +PN+ TFL++
Sbjct: 384 EIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLF 443
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC E F +M +++ I P EHY +V + + G L EA + K+ +
Sbjct: 444 ACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLL-CKIDIKHN 502
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
A W A+ + I+G + L A + ++ P
Sbjct: 503 ASLWGAILGASSIYGYMSLGKEAASNLFNMQP 534
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 257 CQEGKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
C G++ EA++L+ + D S + + +LC + K + +H + + + DL LN
Sbjct: 9 CNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLN 68
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I Y K G + AR VFD M +RS+ SW M++GY+ NG ++ LF MR G++
Sbjct: 69 TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128
Query: 376 PNEQTFLAVFSACGSADAIE 395
N+ T+ + AC S ++
Sbjct: 129 ANQFTYGSALRACTSLRCLD 148
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H + + ++ + N +I MY K G++ AR VFD M R+ SW M++GY
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
GL +E + LF QM LG++PN ++ +AC + + + + GI
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
LV G G ++ AQ+ E+
Sbjct: 883 VGTALVHFYGSIGLVYNAQKLFEE 906
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 234 NNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWY 293
N+M C D + LA L Q GKV + F + C NP+
Sbjct: 1118 NSMMACYVQDGKCLDGLKILAELLQMGKVMNHVT------------FASALAACSNPECL 1165
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+K VH + + L++ N ++ MYGK G M +A++V M +W+ +I G+
Sbjct: 1166 IESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGH 1225
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
A+N +E ++ ++ +R+ G+ N T ++V AC + D
Sbjct: 1226 AENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPD 1264
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWY-ENAKKVHDYFLQST 307
L+ + G +EA+ L + GV+ + +L C + + +VH + +++
Sbjct: 817 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 876
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
I GD+ + ++ YG G + +A+++F+ M D ++ SW ++ GY+D+G E L +++
Sbjct: 877 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 936
Query: 368 QMRKLGLQPNEQTFLAVFSACG 389
+MR+ G+ N+ TF V S+CG
Sbjct: 937 RMRQEGVSGNQNTFATVTSSCG 958
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 124/309 (40%), Gaps = 35/309 (11%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPK-WYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
VK + +KG+ A+ ++ C P ++ +H + + + D + N +I
Sbjct: 1235 VKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLIT 1294
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG + + +FD + ++S +W+ M+ A +G G+E L++F +MR +G+ ++ +
Sbjct: 1295 MYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 1354
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
F +A + +EE + + G + + GKCG + + + + Q
Sbjct: 1355 FSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ- 1412
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISIL 500
P + W L + HG M+ L P P T +S+L
Sbjct: 1413 -PINRSRLSWNILISAFARHGCFQKARETFHEMLKLG-----------PKPDHVTFVSLL 1460
Query: 501 DG--KSRLVEFRNPTLYRDDEKLKALNQM-KESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
LV DE L + M +E P + + ID LL S
Sbjct: 1461 SACNHGGLV----------DEGLAYYDSMTREFGVFPGIEHCVCIID-------LLGRSG 1503
Query: 558 RLAIAYGLI 566
RL+ A G I
Sbjct: 1504 RLSHAEGFI 1512
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
N KW + +H ++ + ++ + N ++ +Y + G DA VF M +R + SW+
Sbjct: 1063 NLKW---GRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNS 1119
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA-IEEAFIHFESMKSE 407
M+ Y +G +GL++ ++ ++G N TF + +AC + + IE +H
Sbjct: 1120 MMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH------A 1173
Query: 408 FGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
I G +L LV + GK G + EA++ + Q +P +P W AL
Sbjct: 1174 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL-QTMP-QPDRVTWNAL 1221
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ ++A L GVKA+ + + C + + + +V + +L
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLF 167
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++ + KCG M DA +F M +R + SW+ MI GYA G D+ +F M + G
Sbjct: 168 VKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 227
Query: 374 LQPNEQTFLAVFSA 387
L P+ T +V A
Sbjct: 228 LVPDCYTLGSVLRA 241
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV + + F T+ CG + +V + +Q + + N +I M+ S+ +
Sbjct: 941 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 1000
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
A VFDHM + + SW+ MI+ YA +GL E L+ F MR L + N T
Sbjct: 1001 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 214/381 (56%), Gaps = 30/381 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+K DA F + E C + K +H +S + ++V+ N +I MY +CGS+ +A
Sbjct: 439 GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R+F ++++ SW M+ ++ G E L LF++M G++P++ T+ ++ C
Sbjct: 499 ERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHG 558
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
++E+ + +F M G++P +H+ +V +LG+ G LF+A++ +E +PFEP W
Sbjct: 559 GSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLES-MPFEPDPVAWM 617
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPP 490
RIHG ++L + A E + +LDPS P KK+
Sbjct: 618 TFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERG 677
Query: 491 PKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKALNQ----MKESTYVPDTRYVLHDID 544
KK +S ++ +L EF + Y R DE + L + M+ + YVPDT+ VLHD+
Sbjct: 678 LKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVS 737
Query: 545 QEAKEQALLYHSERLAIAYGLISTPAR-TPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ KE LLYHSE++AIA+GL+S+ P+R++KNLRVC DCH A K ++RI GR++I+
Sbjct: 738 EGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIL 797
Query: 604 RDNKRFHHF-KDGKCSCGDYW 623
RD RFH F DGKCSCGDYW
Sbjct: 798 RDCNRFHRFSSDGKCSCGDYW 818
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
P+ +K+H + + DLV+ +I MYGKCGS +AR VFD M R M SW++
Sbjct: 219 TPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNV 278
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSE 407
MI Y NG E L+L++++ G + + TF+++ AC S A+ + +H S E
Sbjct: 279 MIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVH--SHILE 336
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
G+ LV + KCG L EA++
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARK 364
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 48/252 (19%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+EL K G K + F ++ C + K + VH + L+ + ++
Sbjct: 285 QNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE------------ 361
+ ++ MY KCGS+ +AR+VF+ M +R +W +I YA NG G +
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLG 404
Query: 362 ----------------------GLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEA- 397
+++F +M GL+P+ TF+AV AC S + E
Sbjct: 405 SRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVK 464
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL---- 453
+H + +SE + + L+ + +CG L EA++ E T W A+
Sbjct: 465 ALHAQISESELESNVVVTNT--LINMYARCGSLEEAERLFAA--AKEKTVVSWTAMVAAF 520
Query: 454 RNYARIHGDIDL 465
Y R +DL
Sbjct: 521 SQYGRYAEALDL 532
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F T+ C + + +H+ S D ++ N +I MYGKC S+ DAR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 336 DHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ M R++ SW+ MI YA NG E L L+ +M GL + TF++V AC S
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+ L + G+ D F ++ C + +++H+ S
Sbjct: 80 AMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQGREIHNRVFYS 136
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ L N ++ MY + GS+ DA+R+F + R SW+ +I ++ +G L++F
Sbjct: 137 GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
++M K ++PN T++ V S + + + E IH E + + G L+ + G
Sbjct: 197 KEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN--GFDSDLVVATALINMYG 253
Query: 426 KCGHLFEAQQFIEQ 439
KCG EA++ ++
Sbjct: 254 KCGSSHEAREVFDK 267
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 225/383 (58%), Gaps = 28/383 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+++ V+A + ++ C + E ++H L++ D+V+ N +I+MY KCGS
Sbjct: 335 MLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGS 394
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +AR VFD +++R SW+ MI+GY+ +GL E L+ F+ M++ PN+ TF+++ SA
Sbjct: 395 IKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSA 454
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C +A ++ +F+SM ++GI P EHY +V +LG+ GHL +A + IE+ +P EP
Sbjct: 455 CSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEE-IPLEPNV 513
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------------SKADPKK-I 486
+ W AL IH D+DL + + ++ +DP S A +K +
Sbjct: 514 KVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFM 573
Query: 487 PTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKE-STYVPDTRYVL 540
KK +S ++ + + F +P + L+ LN E + YVPD VL
Sbjct: 574 KNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVL 633
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D++ + K++ L HSERLA+A+GLI TP+R +RI+KNLR+C DCH+AIK++S+IV R+
Sbjct: 634 RDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRD 693
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+I+RD RFHHF+DG CSCGDYW
Sbjct: 694 IIIRDMNRFHHFQDGICSCGDYW 716
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 142/286 (49%), Gaps = 34/286 (11%)
Query: 230 NNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKA----DASCFYTLFE 285
N+V + P D V+P S ++R Q + +EA+EL + +A + F ++ +
Sbjct: 194 NDVLRVFEEMPKHD-VIPWSFM-ISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQ 251
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C + + + K+VH + L+ + G++ ++N ++++Y KCG + ++ ++F + +R+ +
Sbjct: 252 SCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVT 311
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
W+ MI GY +G GD+ L L++ M + +Q +E T+ +V AC S A+E IH S+
Sbjct: 312 WNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSL 371
Query: 405 KSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE----FWEALRNYAR 458
K+ + + G L+ + KCG + A +L F+ +E W A+ +
Sbjct: 372 KTIYDKDVVVGN----ALIDMYAKCGSIKNA------RLVFDMLSERDEISWNAMISGYS 421
Query: 459 IHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
+HG + A ++M + + P K T +SIL S
Sbjct: 422 MHGLVGEALKAFQMMQETE-----------CVPNKLTFVSILSACS 456
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q ++ E ++L + G + + F T+ +L + + E A +H + +
Sbjct: 18 QSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAF 77
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+ Y CGS+ AR+ FD +A + M SW M+ YA+N + LQLF +MR +G
Sbjct: 78 VGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVG 137
Query: 374 LQPNEQTFLAVFSACGSADA 393
PN TF V AC +A
Sbjct: 138 FNPNHFTFAGVLKACIGLEA 157
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + + C + + K VH L++ DL + ++++Y K G D RVF+ M
Sbjct: 145 FAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+ W MI+ YA + E ++LF QMR+ + PN+ TF +V +C S + ++
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+H +K G+ L+ V KCG L
Sbjct: 265 VHCHVLK--VGLDGNVFVSNALMDVYAKCGRL 294
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 225/394 (57%), Gaps = 36/394 (9%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA+EL D+G+ A A F +L + +++H ++S ++ + + N +
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY +CG++ A +VF+ M DR++ SW +I G+A +G + L+LF +M + G++PN
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T++AV SAC + E + HF+SM +E G+ P EHY +V +LG+ G L EA QFI
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFI- 637
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------SKAD 482
+P++ A W R+HG+++L HA +++++ +P SK D
Sbjct: 638 NSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWD 697
Query: 483 PKKIPTPPPKKRTAISILDGKSRLVEFRNPT--LYRDD----------EKLKALN-QMKE 529
K++ I + VE N Y D ++L+ L+ ++K+
Sbjct: 698 EVSNIRKAMKEKNLIK--EAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKK 755
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVP+ +VLHD+++E KE+ L HSE++A+A+GLIST P+R+ KNLR+CGDCH+A
Sbjct: 756 LGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSA 815
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK +S GRE+IVRD RFHH KDG+CSC +YW
Sbjct: 816 IKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ RL Q G EAI E++ G + D + C N + +++H ++ +
Sbjct: 243 ITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYA-DNGLGDEGLQ 364
D + +I MY KC GSM AR++FD + D ++ SW MI GY G +E L
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIH 400
LF M + PN TF + AC + A+ E+ F H
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 254 ARLCQE---GKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
RL QE G++ +AI ++ +G D + + C + ++ VH+ QS
Sbjct: 36 GRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQS 95
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQL 365
++ D V N +I +Y KCG A +F M + R + SW M++ +A+N +G L
Sbjct: 96 DLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLT 155
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F M + G PNE F A AC +A+ +
Sbjct: 156 FVDMIENGYYPNEYCFAAATRACSTAEFV 184
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + + C N ++V + ++ + N +I MY + G + DAR+ FD +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
++++ S++ +I+ YA N +E L+LF ++ G+ + TF ++ S S I +
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
IH +KS ++ + L+ + +CG++ A Q E
Sbjct: 499 IHARVIKSGLKLNQSVCN--ALISMYSRCGNIESAFQVFE 536
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGK 324
+++++ G + CF C ++ + + +++ ++ D+ + +I+M+ K
Sbjct: 157 VDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK 216
Query: 325 C-GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G + A +VF+ M +R+ +W LMI G E + LF +M G +P+ T
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSG 276
Query: 384 VFSACGSADAI 394
V SAC + + +
Sbjct: 277 VISACANMELL 287
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 207/382 (54%), Gaps = 34/382 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + ++ CGN + H Y +Q+ D+++ +++MY KCGS+ A
Sbjct: 914 GVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA 973
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R +FD A + + W MI Y +G G + + LF+QM K G++P+ TF V SAC +
Sbjct: 974 RCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHS 1033
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+EE ++F+ M EF I+ +Y +V +LG+ G L EA IE +P EP A W
Sbjct: 1034 GLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIEN-MPVEPDASIWG 1092
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI---------------PTPPPKKRTA 496
+L RIH ++DL + + + LDP A + R
Sbjct: 1093 SLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRG 1152
Query: 497 ISILDGKSRLVEFRNPT---------------LYRDDEKLKALNQMKESTYVPDTRYVLH 541
+ + G S LVE+ N LY E+L A MK YVP T +VLH
Sbjct: 1153 ANKIQGFS-LVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAA--PMKHLGYVPLTDFVLH 1209
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
DI++EAKE AL YHSERLAIA+GLI+T T LRI KNLR+CGDCHNAIK++S+IV R +
Sbjct: 1210 DIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVI 1269
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFH F+DG CSCGDYW
Sbjct: 1270 LVRDMHRFHRFEDGVCSCGDYW 1291
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 29/303 (9%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G++ DA + ++ A +H Y ++S ++ + +IE+Y KCGS
Sbjct: 399 MLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGS 458
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK-LGLQPNEQTFLAVFS 386
+ DA ++F M R + W MI Y +G G E L++F+QM K ++PN TFL++ S
Sbjct: 459 LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS 518
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A +EE F+ M ++ + P +EH+ +V +LG+ G L +A I ++P
Sbjct: 519 ACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDII-NRMPIPAG 577
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------DPK---------K 485
W AL RIH +I++ + A + + LDPS A D K +
Sbjct: 578 PHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTR 637
Query: 486 IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD-----EKLKALN-QMKESTYVPDTRYV 539
I KK S+++ + + F + D E L+ L QM + Y+PD ++
Sbjct: 638 IKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFL 697
Query: 540 LHD 542
LHD
Sbjct: 698 LHD 700
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 259 EGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+G+ ++EL M+KG+K D F + C + K +H + + DL +
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+ +++MY KCG + AR VFD MA R + SW MI+GYA NG E L F+ MR G+
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLF 431
PN + L+V ACG+ A+ + + H +++ EF I T ++ + KCG L
Sbjct: 916 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVAT----AIMDMYSKCGSLD 971
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHG----DIDLED 467
A+ ++ + W A+ IHG IDL D
Sbjct: 972 LARCLFDETAGKDLVC--WSAMIASYGIHGHGRKAIDLFD 1009
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+++K + ++ + + C + E KK+H + D ++ +I+MY KC
Sbjct: 297 EMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCS 356
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+A +F + + + SW +++GYA NG+ + + +F M G+QP+ + + +
Sbjct: 357 CPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 416
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPF 443
A ++A +H ++S F + ++G L+ + KCG L +A + + +
Sbjct: 417 ASSELGIFQQALCLHGYVVRSGF----NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR 472
Query: 444 EPTAEFWEALRNYARIHG 461
+ W ++ IHG
Sbjct: 473 DVV--IWSSMIAAYGIHG 488
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 263 KEAIELMDKGVKADASCF--YTLFELCGNPKWYENAKK---VHDYFLQSTIRGDLVLNNK 317
+EA+ L + V D TL + N K VH ++ GDL L N
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ +Y K G A +F M ++ + SW MI YA+N +E L LF +M + +PN
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 378 EQTFLAVFSACGSADAIEEA-FIH----FESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
T ++ AC + +EE IH ++ + +F +S L+ + KC E
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST------ALIDMYMKCSCPDE 360
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYAR 458
A Q+LP + + L YA+
Sbjct: 361 AVDLF-QRLPKKDVVSWVALLSGYAQ 385
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 287 CGNPKWYENAKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C + E K +H + ++ I D+ + + ++E+Y KCG M +A +VF+
Sbjct: 113 CAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVL 172
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACG 389
W M+ GY N +E L LF QM + + + T ++V SAC
Sbjct: 173 WTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACA 217
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
LF+ C N + + ++H ++ I D K+ +Y KC S+ AR+VFD +
Sbjct: 10 LFQACNNGR---SVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ W+ + Y +E L+LF M G P+ T AC +E IH
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 401 FESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFE-PTAEFWEAL 453
+ K++ G++ ++G LV + KCG + EA + E+ F+ P W ++
Sbjct: 127 GFAKKND---EIGSDMFVGSALVELYSKCGQMGEALKVFEE---FQRPDTVLWTSM 176
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+ KK H ++ D + K MY + A VF+ + + W++MI G
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTF-LAVFSACGSADAIEEAFIHFESMKSEFGIS 411
+A +G L+L+ +M + GL+P++ F A+ S G +D IH + G S
Sbjct: 793 FATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCC--GCS 850
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
LV + KCG + EA + + K+ + + YA
Sbjct: 851 NDLFVDAALVDMYAKCGDI-EAARLVFDKMAVRDLVSWTSMISGYA 895
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 221/393 (56%), Gaps = 29/393 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNNK 317
EG VK ++L +GV+ + F ++ C P E K+ H ++S L +++
Sbjct: 475 EGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSA 534
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MY K G++ A VF DR + SW+ MI+GYA +G G + L++FE+MR L+ +
Sbjct: 535 LVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 594
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TF+ V SAC A + E +F+ M ++ I P EHY +V + + G L +A I
Sbjct: 595 GITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLI 654
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------------- 478
K+PF A W L R+H ++ L + A E ++ L P
Sbjct: 655 -NKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNW 713
Query: 479 -SKADPKKI-PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKES 530
+A +K+ KK S ++ K++ F +P R KL+ L+ ++K++
Sbjct: 714 QERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDA 773
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y PDT+YVLHD+++E KE L HSERLAIA+GLI+TP TP++I+KNLRVCGDCH I
Sbjct: 774 GYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVI 833
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I GR+++VRD+ RFHHFK G CSCGDYW
Sbjct: 834 KLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A G EA EL + GVK + F T+ +LC N K AK++H +++
Sbjct: 266 IAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGS 325
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFE 367
DL + ++ Y KC + DA ++F M +++ SW +I+GY NG D + LF
Sbjct: 326 DFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFC 385
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QMR+ G++PN T+ + +A A+ + IH +K+ + SP L K
Sbjct: 386 QMRREGVRPNHFTYSTILTANA---AVSPSQIHALVVKTNYENSPSVGT--ALSDSYSKI 440
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEA-LRNYARIHGDID 464
G EA + E L E W A L YA++ GDI+
Sbjct: 441 GDANEAAKIFE--LIDEKDIVAWSAMLSGYAQM-GDIE 475
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ L G D S + ++CG K+VH ++ D+ + +
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY K S+ D RVFD M +++ SW ++ GY NGL ++ L+LF QM+ G++PN
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKS 406
TF AV + A+E+ +H +KS
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA Q G ++A++L +G+K + F + E +VH ++S +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N ++ MY K ++DA+ VFD M +R+ SW+ MI G+ NGL E +LF +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMK--SEFGISPGTEHYLGLVGV 423
MR G++ + F V C A+ E +F +H + +K S+F ++ T L+
Sbjct: 285 MRLEGVKLTQTIFATVIKLC--ANIKEMSFAKQLHCQVIKNGSDFDLNIKT----ALMVA 338
Query: 424 LGKCGHLFEA 433
KC + +A
Sbjct: 339 YSKCSEIDDA 348
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y K G +A ++F+ + ++ + +W M++GYA G + +++F Q+ K G++PNE TF
Sbjct: 437 YSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTF 496
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+V +AC + A E F S + G S LV + K G++ A + ++++
Sbjct: 497 SSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV 556
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 229/427 (53%), Gaps = 34/427 (7%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTL 283
++ + NQ P+ D V +V ++ + G+ ++A+ ++ GV+ D F TL
Sbjct: 550 EMKSARKVFNQIPSPDDVAWTTV--ISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ C E K++H ++ D + +++MY KCG++ DA +F M RS+
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
W+ MI G A +G +E L F +M+ G+ P+ TF+ V SAC + +A+ +F+S
Sbjct: 668 ALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDS 727
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
M+ +G+ P EHY LV L + GH+ EA++ + +PFE +A + L N R+ GD
Sbjct: 728 MQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS-MPFEASATMYRTLLNACRVQGDK 786
Query: 464 DLEDHAEELMVDLDPSKADPKKIPT---------------------PPPKKRTAISILDG 502
+ + E + +DPS + + + KK S +D
Sbjct: 787 ETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDM 846
Query: 503 KSRLVEFRNPTLYRDDEKLK------ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
K+++ F ++ L + ++KE YVPDT + L DI++E KE AL YHS
Sbjct: 847 KNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHS 906
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
E+LAIAYGL+ TP T LR+IKNLRVCGDCHNAIK +S + RE+++RD RFHHF+ G
Sbjct: 907 EKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGI 966
Query: 617 CSCGDYW 623
CSCGDYW
Sbjct: 967 CSCGDYW 973
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA+ L ++G KAD F + G + K++H ++ DL + + +
Sbjct: 482 REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGI 541
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG M AR+VF+ + +W +I+G +NG ++ L + QMR G+QP+E
Sbjct: 542 LDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDE 601
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
TF + AC A+E+ IH MK P LV + KCG++ +A
Sbjct: 602 YTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDA 655
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ Q G+ EA++ +K+ C + + + + E K++H ++
Sbjct: 269 LSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW 328
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N I MY K GS+ ARR+F M + + SW+ +I+G A +GL + L+LF
Sbjct: 329 DQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFID 388
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-----IHFESMKSEFGISPGTEHYLGLVGV 423
+ + GL P++ T +V AC S +EE++ +H ++K+ GI + L+ V
Sbjct: 389 LLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKA--GIVLDSFVSTALIDV 443
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
K G + EA+ + F+ + W A+ +HG +++ E L
Sbjct: 444 YSKGGKMEEAELLFHNQDGFDLAS--WNAM-----MHGFTVSDNYREAL 485
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 283 LFELC---GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
LF+LC G+P ++ + Y ++ ++ D+ + ++ +Y K + +AR +FD M
Sbjct: 128 LFKLCLLYGSPS---ASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
R + W++M+ Y + G GDE L LF + GL+P+ + + G E
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE 240
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGN-PKWYENAKKVHDYFLQSTIRGDLVLNN 316
+E ++ I+L+ G+ D ++ C + + Y ++VH L++ I D ++
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVST 438
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I++Y K G M +A +F + + SW+ M++G+ + E L+LF M + G +
Sbjct: 439 ALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKA 498
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHY-----LGLVGVLGKCGHL 430
++ TF A G +++ IH +K F HY G++ + KCG +
Sbjct: 499 DQITFANAAKAAGCLVRLQQGKQIHAVVIKMRF-------HYDLFVISGILDMYLKCGEM 551
Query: 431 FEAQQFIEQ 439
A++ Q
Sbjct: 552 KSARKVFNQ 560
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYA 354
K+ H + S + D + N +I MY KCGS+ AR++FD +DR + +++ ++ YA
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYA 92
Query: 355 DNG-LGD-----EGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
G L D E +F +R+ + T +F C
Sbjct: 93 HTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC 132
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 228/406 (56%), Gaps = 38/406 (9%)
Query: 253 LARLCQEGKVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
+A Q G EAI L K G+K +A + C + + K++H+ ++
Sbjct: 272 IALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRM 331
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + +++MY KCG + A R F + ++++ SW MI GY +G G E L++F
Sbjct: 332 GLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIF 391
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M++ GL+PN TF++V +AC A ++E + +MK EFGI G EHY +V +LG+
Sbjct: 392 TEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGR 451
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA I++ + +P A W AL + RIH +++L + + + + +LD S +
Sbjct: 452 AGCLDEAYSLIKE-MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVL 510
Query: 482 ------------DPKKIPTPPPKKRT----AISILDGKSRLVEF--------RNPTLYRD 517
D ++I +R S + K ++ F ++ +Y
Sbjct: 511 LSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSY 570
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
EKL L +M+E+ YVP+T VLHD+D+E KE AL HSE+LA+A+ L+++ R+ + II
Sbjct: 571 LEKL--LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHII 628
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVC DCH A+K +++I RE+I+RD +RFHHFKDG CSC DYW
Sbjct: 629 KNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 316 NKVIEMYGKCGS--MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL- 372
N +++ Y K GS + AR+VFD M +R + SW+ MI YA NG+ E + L+ +M +
Sbjct: 237 NTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 295
Query: 373 -GLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++ N AV AC A AI+ IH + ++ G+ +V + KCG +
Sbjct: 296 GGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR--MGLEENVYVGTSIVDMYSKCGRV 353
Query: 431 -FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ F + K E W A+ +HG
Sbjct: 354 EMASRAFRKIK---EKNILSWSAMITGYGMHG 382
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 41/418 (9%)
Query: 243 DQVLPPSV----ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYE 294
+QV PS+ A ++ + G +EAIEL K ++ D+ + C E
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
A+ + +Y S R D+++N +I+ Y KCGS+ AR VFD + D+ + W M+ GY
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+G G E + LF MR+ G+ PN+ TF+ + +AC ++ +EE + F M+ ++GI P
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRH 511
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
+HY +V +LG+ GHL A F+ +P EP W AL + +IH + L ++A E +
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFV-MNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLF 570
Query: 475 DLDPSKAD-----------------PKKIPT----PPPKKRTAISILDGKSRLVEF---- 509
LDP K+ K S+++ +L F
Sbjct: 571 SLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGD 630
Query: 510 ----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
R+ ++ + E L+ ++KE+ +VP T VLHD++ E E+ L HSERLAIAYGL
Sbjct: 631 KTHPRSKEIFEEVEDLE--RRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGL 688
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
ISTP T LRI KNLR C +CH AIK++S++V RE++VRD RFHHFKDG CSCGDYW
Sbjct: 689 ISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G AIE+ + V D F + + C E ++VH + D+
Sbjct: 150 RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVF 209
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ +Y KCG + A VF + DR++ SW +I+GYA NG E L++F +MRK
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P+ ++V A + +E IH +K G+ + + L + KCGH+
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIK--MGLECEFDLLISLTSLYAKCGHVMV 327
Query: 433 AQQFIEQKLPFEPTAEFWEAL 453
A+ F Q P+ FW A+
Sbjct: 328 ARLFFNQVE--NPSLIFWNAM 346
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 103/228 (45%), Gaps = 17/228 (7%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
D+ + + ++ Q G+ EA+ E+ V+ D ++ + + E+ K
Sbjct: 236 DRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKS 295
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++ + + L + +Y KCG + AR F+ + + S+ W+ MI+GY NG
Sbjct: 296 IHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGY 355
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-----FIHFESMKSEFGISPG 413
+E ++LF M+ ++P+ T + +AC ++E A +I +++ ++
Sbjct: 356 AEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT- 414
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ KCG + + +F+ ++P + W A+ +HG
Sbjct: 415 -----SLIDTYAKCGSV-DMARFVFDRIP-DKDVVVWSAMMVGYGLHG 455
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L K++ G ++ AR++FD D + W+ ++ Y+ +G ++++ +M+
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC 168
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P+ +F V AC + A+E +H + + F ++ GLV + KCG +
Sbjct: 169 VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN--GLVALYAKCGEIVR 226
Query: 433 A 433
A
Sbjct: 227 A 227
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 228/406 (56%), Gaps = 38/406 (9%)
Query: 253 LARLCQEGKVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
+A Q G EAI L K G+K +A + C + + K++H+ ++
Sbjct: 271 IALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRM 330
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + +++MY KCG + A R F + ++++ SW MI GY +G G E L++F
Sbjct: 331 GLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIF 390
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M++ GL+PN TF++V +AC A ++E + +MK EFGI G EHY +V +LG+
Sbjct: 391 TEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGR 450
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA I++ + +P A W AL + RIH +++L + + + + +LD S +
Sbjct: 451 AGCLDEAYSLIKE-MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVL 509
Query: 482 ------------DPKKIPTPPPKKRT----AISILDGKSRLVEF--------RNPTLYRD 517
D ++I +R S + K ++ F ++ +Y
Sbjct: 510 LSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSY 569
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
EKL L +M+E+ YVP+T VLHD+D+E KE AL HSE+LA+A+ L+++ R+ + II
Sbjct: 570 LEKL--LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHII 627
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVC DCH A+K +++I RE+I+RD +RFHHFKDG CSC DYW
Sbjct: 628 KNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 316 NKVIEMYGKCGS--MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL- 372
N +++ Y K GS + AR+VFD M +R + SW+ MI YA NG+ E + L+ +M +
Sbjct: 236 NTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 294
Query: 373 -GLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++ N AV AC A AI+ IH + ++ G+ +V + KCG +
Sbjct: 295 GGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR--MGLEENVYVGTSIVDMYSKCGRV 352
Query: 431 -FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ F + K E W A+ +HG
Sbjct: 353 EMASRAFRKIK---EKNILSWSAMITGYGMHG 381
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 222/424 (52%), Gaps = 30/424 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQ--EGKVKEAIELMDKGVKADASCFYTLFEL 286
L++ +C +GD + S+ C EG +K +E++ KG++ D +L
Sbjct: 455 LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + YE K+VH + ++ D N ++ Y KCGS+ DA F + +R + SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI G A +G G L+LF +M G+ PN T +V AC A ++EA +F SMK
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
FGI EHY ++ +LG+ G L +A + + +PF+ A W AL +R+H D +L
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELV-NSMPFQANASIWGALLGASRVHKDPELG 693
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
A E + L+P K+ K + KK A+S ++ K +
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDK 753
Query: 506 LVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P KL L + M ++ +VP+ LHD+D+ KE L +HSERL
Sbjct: 754 VHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+ L+STP P+R+ KNLR+C DCH A K +S+IV RE+I+RD RFHHF+DG CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSC 873
Query: 620 GDYW 623
GDYW
Sbjct: 874 GDYW 877
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 265 AIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
AIEL+ + G+ + ++ + C ++ +++H + +++ D + +++
Sbjct: 287 AIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K + DAR+VFD M R + + +I+G + G DE L LF ++RK GL N T
Sbjct: 347 MYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AV + S +A +H ++K F + GL+ KC L +A + E+
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVN--GLIDSYWKCSCLSDANRVFEE 464
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADN 356
+VH + + D+ + N ++ MYG G M DARRVF+ ++R+ SW+ +++ Y N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
+ +Q+F +M G+QP E F V +AC + I EA +M G
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI-EAGRQVHAMVVRMGYDKDVFT 239
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDH-AEELMVD 475
LV + K G + + I +K+P + W AL + ++G DH A EL++
Sbjct: 240 ANALVDMYMKMGRV-DIASVIFEKMP-DSDVVSWNALISGCVLNG----HDHRAIELLLQ 293
Query: 476 LDPSKADP 483
+ S P
Sbjct: 294 MKYSGLVP 301
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G++ F + C + E ++VH ++ D+ N +++MY K G
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +F+ M D + SW+ +I+G NG ++L QM+ GL PN T ++
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILK 311
Query: 387 ACGSADAIE 395
AC A A +
Sbjct: 312 ACSGAGAFD 320
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL +G+ + + + + + + ++VH ++ D + N +I+ Y KC
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++DA RVF+ + + + MI + G+ ++LF +M + GL+P+ ++ +
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPF 443
AC S A E+ +H +K +F ++ + G LV KCG + E + LP
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSI-EDAELAFSSLP- 567
Query: 444 EPTAEFWEALRNYARIHG 461
E W A+ HG
Sbjct: 568 ERGVVSWSAMIGGLAQHG 585
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N +I Y KC ARRVFD + D SW ++ Y++NGL +Q F MR G
Sbjct: 39 FRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ NE V DA A +H +M + FG + LV + G G + +A
Sbjct: 99 VCCNEFALPVVLKCV--PDARLGAQVHAMAMATGFGSDVFVAN--ALVAMYGGFGFMDDA 154
Query: 434 QQFIEQKLPFEPTAEFWEAL 453
++ + E A W L
Sbjct: 155 RRVFNEA-DSERNAVSWNGL 173
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 30/424 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQ--EGKVKEAIELMDKGVKADASCFYTLFEL 286
L++ +C +GD + S+ C EG +K +E++ KG++ D +L
Sbjct: 455 LSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + YE K+VH + ++ D N ++ Y KCGS+ DA F + +R + SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI G A +G G L+LF +M G+ PN T +V AC A ++EA +F SMK
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
FGI EHY ++ +LG+ G L +A + + +PF+ A W AL +R+H D +L
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELV-NSMPFQANASVWGALLGASRVHKDPELG 693
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
A E + L+P K+ K + KK A+S ++ K +
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDK 753
Query: 506 LVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P KL L + M ++ Y+P+ LHD+D+ KE L +HSERL
Sbjct: 754 VHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+ L+STP P+R+ KNLR+C DCH A K +S IV RE+I+RD RFHHF+DG CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSC 873
Query: 620 GDYW 623
GDYW
Sbjct: 874 GDYW 877
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 265 AIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
AIEL+ G+ + ++ + C ++ +++H + +++ D + +++
Sbjct: 287 AIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K + DA +VFD M+ R + W+ +I+G + G DE +F +RK GL N T
Sbjct: 347 MYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 406
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AV + S +A A ++ + G GL+ KC L +A + E+
Sbjct: 407 LAAVLKSTASLEA-ASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 464
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADN 356
+VH + + D+ + N ++ MYG G M DARRVFD ++R+ SW+ +++ Y N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
+ +Q+F +M G+QP E F V +AC + I +A +M G
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMVVRMGYEKDVFT 239
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDH-AEELMVD 475
LV + K G + + I +K+P + W AL + ++G DH A EL++
Sbjct: 240 ANALVDMYVKMGRV-DIASVIFEKMP-DSDVVSWNALISGCVLNG----HDHRAIELLLQ 293
Query: 476 LDPSKADPKKIPTPPPKKRTA 496
+ S P K A
Sbjct: 294 MKSSGLVPNVFMLSSILKACA 314
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G++ F + C + + ++VH ++ D+ N +++MY K G
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMG 251
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +F+ M D + SW+ +I+G NG ++L QM+ GL PN ++
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILK 311
Query: 387 ACGSADAIE 395
AC A A +
Sbjct: 312 ACAGAGAFD 320
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I Y KC ARRVFD + D SW ++ Y++NGL +Q F MR G
Sbjct: 39 LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ NE V DA A +H +M + FG + LV + G G + +A
Sbjct: 99 VCCNEFALPVVLKCV--PDAQLGAQVHAMAMATGFGSDVFVAN--ALVAMYGGFGFMDDA 154
Query: 434 QQFIEQKLPFEPTAEFWEAL 453
++ ++ E A W L
Sbjct: 155 RRVFDEA-GSERNAVSWNGL 173
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y KC ++DA RVF+ + + + MI + G+ ++LF +M + GL+
Sbjct: 443 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
P+ ++ +AC S A E+ +H +K +F ++ + G LV KCG + E
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSI-E 557
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ LP E W A+ HG
Sbjct: 558 DAELAFSSLP-ERGVVSWSAMIGGLAQHG 585
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 222/424 (52%), Gaps = 30/424 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQ--EGKVKEAIELMDKGVKADASCFYTLFEL 286
L++ +C +GD + S+ C EG +K +E++ KG++ D +L
Sbjct: 455 LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + YE K+VH + ++ D N ++ Y KCGS+ DA F + +R + SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI G A +G G L+LF +M G+ PN T +V AC A ++EA +F SMK
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
FGI EHY ++ +LG+ G L +A + + +PF+ A W AL +R+H D +L
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELV-NSMPFQANASIWGALLGASRVHKDPELG 693
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
A E + L+P K+ K + KK A+S ++ K +
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDK 753
Query: 506 LVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P KL L + M ++ +VP+ LHD+D+ KE L +HSERL
Sbjct: 754 VHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+ L+STP P+R+ KNLR+C DCH A K +S+IV RE+I+RD RFHHF+DG CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSC 873
Query: 620 GDYW 623
GDYW
Sbjct: 874 GDYW 877
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 265 AIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
AIEL+ + G+ + ++ + C ++ +++H + +++ D + +++
Sbjct: 287 AIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K + DAR+VFD M R + + +I+G + G DE L LF ++RK GL N T
Sbjct: 347 MYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AV + S +A +H ++K F + GL+ KC L +A + E+
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVN--GLIDSYWKCSCLSDANRVFEE 464
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADN 356
+VH + + D+ + N ++ MYG G M DARRVF+ ++R+ SW+ +++ Y N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
+ +Q+F +M G+QP E F V +AC + I EA +M G
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI-EAGRQVHAMVVRMGYDKDVFT 239
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDH-AEELMVD 475
LV + K G + + I +K+P + W AL + ++G DH A EL++
Sbjct: 240 ANALVDMYMKMGRV-DIASVIFEKMP-DSDVVSWNALISGCVLNG----HDHRAIELLLQ 293
Query: 476 LDPSKADP 483
+ S P
Sbjct: 294 MKYSGLVP 301
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G++ F + C + E ++VH ++ D+ N +++MY K G
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +F+ M D + SW+ +I+G NG ++L QM+ GL PN T ++
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILK 311
Query: 387 ACGSADAIE 395
AC A A +
Sbjct: 312 ACSGAGAFD 320
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL +G+ + + + + + + ++VH ++ D + N +I+ Y KC
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++DA RVF+ + + + MI + G+ ++LF +M + GL+P+ ++ +
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPF 443
AC S A E+ +H +K +F ++ + G LV KCG + E + LP
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSI-EDAELAFSSLP- 567
Query: 444 EPTAEFWEALRNYARIHG 461
E W A+ HG
Sbjct: 568 ERGVVSWSAMIGGLAQHG 585
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N +I Y KC ARR FD + D SW ++ Y++NGL +Q F MR G
Sbjct: 39 FRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ NE V DA A +H +M + FG + LV + G G + +A
Sbjct: 99 VCCNEFALPVVLKCV--PDARLGAQVHAMAMATGFGSDVFVAN--ALVAMYGGFGFMDDA 154
Query: 434 QQFIEQKLPFEPTAEFWEAL 453
++ + E A W L
Sbjct: 155 RRVFNEA-DSERNAVSWNGL 173
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 213/381 (55%), Gaps = 30/381 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+K DA F + E C + K +H +S + ++V+ N +I MY +CGS+ +A
Sbjct: 439 GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R+F ++++ SW M+ ++ G E L LF++M G++P++ T+ ++ C
Sbjct: 499 ERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHG 558
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
++E+ + +F M ++P +H+ +V +LG+ G LF+A++ +E +PFEP W
Sbjct: 559 GSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLES-MPFEPDPVAWM 617
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPP 490
RIHG ++L + A E + +LDPS P KK+
Sbjct: 618 TFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERG 677
Query: 491 PKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKALNQ----MKESTYVPDTRYVLHDID 544
KK +S ++ +L EF + Y R DE + L + M+ + YVPDT+ VLHD+
Sbjct: 678 LKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVS 737
Query: 545 QEAKEQALLYHSERLAIAYGLISTPAR-TPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ KE LLYHSE++AIA+GL+S+ P+R++KNLRVC DCH A K ++RI GR++IV
Sbjct: 738 EGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIV 797
Query: 604 RDNKRFHHF-KDGKCSCGDYW 623
RD RFH F DGKCSCGDYW
Sbjct: 798 RDCNRFHRFSSDGKCSCGDYW 818
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSM 328
M VK +++ + + P+ +K+H + + DLV+ +I MYGKCGS
Sbjct: 199 MKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSS 258
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+AR VFD M R M SW++MI Y NG E L+L++++ G + + TF+++ AC
Sbjct: 259 HEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGAC 318
Query: 389 GSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
S A+ + +H S E G+ LV + KCG L EA++
Sbjct: 319 SSVKALAQGRLVH--SHILERGLDSEVAVATALVNMYAKCGSLEEARK 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+EL K G K + F ++ C + K + VH + L+ + ++ +
Sbjct: 287 GDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE-------------- 361
++ MY KCGS+ +AR+VF+ M +R +W +I YA NG G +
Sbjct: 347 TALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR 406
Query: 362 --------------------GLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEA-FI 399
+++F +M GL+P+ TF+AV AC S + E +
Sbjct: 407 DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKAL 466
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL----RN 455
H + +SE + + L+ + +CG L EA++ E T W A+
Sbjct: 467 HAQISESELESNVVVTNT--LINMYARCGSLEEAERLFAA--AKEKTVVSWTAMVAAFSQ 522
Query: 456 YARIHGDIDL 465
Y R +DL
Sbjct: 523 YGRYAEALDL 532
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F T+ C + + +H+ S D ++ N +I MYGKC S+ DAR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 336 DHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ M R++ SW+ MI YA NG E L L+ +M GL + TF++V AC S
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+ L + G+ D F ++ C + +++H+ S
Sbjct: 80 AMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQGREIHNRVFYS 136
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ L N ++ MY + GS+ DA+R+F + R SW+ +I ++ +G L++F
Sbjct: 137 GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
++M K ++PN T++ V S + + + E IH E + + F L+ + G
Sbjct: 197 KEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA--TALINMYG 253
Query: 426 KCGHLFEAQQFIEQ 439
KCG EA++ ++
Sbjct: 254 KCGSSHEAREVFDK 267
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 220/394 (55%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E ++ IE+ G + S F + C + E ++H +++ + N
Sbjct: 238 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 297
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG+M DAR F+ M +R + SW+ MI GYA +G G E L++F+ MR +P
Sbjct: 298 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 357
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
++ T + V +AC + +E+ +F SM +FG++ EHY ++ +LG+ G L EA
Sbjct: 358 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 417
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------- 481
+ + +PFEP + W AL +RIH + +L A E + +L+P A
Sbjct: 418 M-KDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 476
Query: 482 --DPKKIPTP----PPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKE 529
D +K+ KK S ++ ++++ F ++ + EK+ A +MK+
Sbjct: 477 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKK 536
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YV T VLHD+++E KE L YHSE+LA+AYG+++ P P+R+IKNLRVCGDCHNA
Sbjct: 537 AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNA 596
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S I GR +++RD+ RFHHF+ G CSCGDYW
Sbjct: 597 FKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y + G + +A+ VFD M + SW M+ Y+ G +E LQLF +M + G
Sbjct: 196 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 255
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
N F V S C A+E +H +++ +G+ ++G L+ + KCG++ +
Sbjct: 256 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC----FVGNALLAMYFKCGNMED 311
Query: 433 AQQFIEQ 439
A+ E+
Sbjct: 312 ARNAFEE 318
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q GK+ EA EL D+ D + + A+++ D + +R D+
Sbjct: 80 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTA 135
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP- 376
V+ Y + G + +ARRVFD M +R+ SW+ M+ Y + DE +LF M P
Sbjct: 136 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------PC 189
Query: 377 -NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-----------TEHYLGLVGVL 424
N ++ + + A +EEA F++M + +S +E L L +
Sbjct: 190 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 249
Query: 425 GKCGHLFEAQQF 436
G+CG F
Sbjct: 250 GRCGEWVNRSAF 261
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA + G+V+EA L + + D + L + G +W + + F + R D+
Sbjct: 44 LAAYVRNGRVEEARGLFNSRTEWDVISWNAL--MSGYVQW-GKMSEARELFDRMPGR-DV 99
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
V N ++ Y + G M +ARR+FD R + +W +++GYA NG+ +E ++F+ M
Sbjct: 100 VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 156
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 243/453 (53%), Gaps = 48/453 (10%)
Query: 216 YQQVSPGHQIPNQL-NNVPNNMNQCPAGDQVLP-------PSV----ADLARLCQEGKVK 263
Y+ ++ G ++ L N+ N ++C D+ + SV A +A Q+G+
Sbjct: 34 YRMITLGCELDTVLGTNLINMYSRCDVPDKAIEVFDAMHNKSVVVWTAMIAAHSQQGQGL 93
Query: 264 EAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+EL MD +GV+AD F + ++C N A+ +H + + D+V+ N ++
Sbjct: 94 EALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQARILHATVAGTELEQDMVVKNTLV 153
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MYGKCG + +AR+VF+ MA + M SW +I YA G +LF M++ G +
Sbjct: 154 NMYGKCGKLNEARQVFEKMASKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTV 213
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+ V S C A +++A F SM ++G+SP E+Y ++ +LG+ G L + + +E
Sbjct: 214 IFVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLEN 273
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL---------------------DP 478
+ EP W + N ++H D+ A + +V L D
Sbjct: 274 -MTLEPDFIAWMSFLNACKVHKDMKRGVRAAQRLVQLNRRNSASYVLLSDIHAVCGKFDA 332
Query: 479 SKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKES 530
+ ++I KK +S ++ K ++ +F RN ++ + ++L L M+E+
Sbjct: 333 AAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFASGSRTHPRNDEIFAELQRLGVL--MREA 390
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YVPDT VL D+++E KEQ L YHSE+ A+A+GLISTP+ TPLR++KNLRVC DCH A
Sbjct: 391 GYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPLRVVKNLRVCTDCHTAT 450
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I GR++ VRD RFH FKDG CSC DYW
Sbjct: 451 KFISKITGRQITVRDANRFHEFKDGFCSCKDYW 483
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K +++ D +K D +L C N YE K++H + ++ D+ +N +
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY KCGS+ DA R F + +R + SW MI GYA +G G E L+LF QM + G+ PN
Sbjct: 528 VNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNH 587
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T ++V AC A + E +FE M+ FGI P EHY ++ +LG+ G L EA + +
Sbjct: 588 ITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELV- 646
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PFE W AL ARIH +I+L A +++ DL+P K+
Sbjct: 647 NSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWE 706
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF--RNPTLYRDDEKLKALNQ----MKEST 531
K + KK +S ++ K ++ F + + R DE L+Q + ++
Sbjct: 707 NVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAG 766
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y +H++D+ KE+ L +HSE+LA+A+GLI+TP P+R+ KNLR+C DCH K
Sbjct: 767 YSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFK 826
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ +IV RE+IVRD RFHHFKDG CSCGDYW
Sbjct: 827 FVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ Q G V+EA+ E+ GVK + F ++ + C + +KVH + +
Sbjct: 54 LSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGF 113
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + N ++ MY KCG + D+RR+F + +R++ SW+ + + Y + L E + LF++
Sbjct: 114 ESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173
Query: 369 MRKLGLQPNEQTFLAVFSACG 389
M + G+ PNE + + +AC
Sbjct: 174 MVRSGIMPNEFSISIILNACA 194
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G + + + + C + E +++H ++ DL +++MY KC
Sbjct: 274 EMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCE 333
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M DARR +D M + + +W+ +I+GY+ G + + LF +M + N+ T V
Sbjct: 334 MMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLK 393
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+ S AI+ IH S+KS GI L+ GKC H+ EA + E++
Sbjct: 394 SVASLQAIKVCKQIHTISIKS--GIYSDFYVINSLLDTYGKCNHIDEASKIFEERT---- 447
Query: 446 TAEFWEALRNYARI 459
WE L Y +
Sbjct: 448 ----WEDLVAYTSM 457
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H ++S I D + N +++ YGKC + +A ++F+ + ++ MI Y+
Sbjct: 404 CKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQ 463
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
G G+E L+L+ QM+ ++P+ ++ +AC + A E+ +H ++K FG
Sbjct: 464 YGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIK--FGFMCDI 521
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
LV + KCG + +A + + +P + + YA+ HG H +E +
Sbjct: 522 FASNSLVNMYAKCGSIEDADRAFSE-IPNRGIVSWSAMIGGYAQ-HG------HGKEALR 573
Query: 475 DLDPSKADPKKIPTPPPKKRTAISIL 500
+ D PP T +S+L
Sbjct: 574 LFNQMLRDG-----VPPNHITLVSVL 594
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + ++ D L N ++ +Y KC AR++ D ++ + SW +++GY NG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+E L +F +M LG++ NE TF +V AC
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKAC 92
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 254 ARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ LC E V E++ G+ + + C + + +K+H L+ + D
Sbjct: 161 SELCGEA-VGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQF 219
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N +++MY K G + A VF +A + SW+ +I G + D L L ++M+ G
Sbjct: 220 SANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSG 279
Query: 374 LQPNEQTFLAVFSACGS 390
+PN T + AC +
Sbjct: 280 TRPNMFTLSSALKACAA 296
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 215/397 (54%), Gaps = 36/397 (9%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +EA+ L + G+ D + C E K+VH FL+S + L ++
Sbjct: 47 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 106
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY KCG + DA +VFD M + + +W +I GYA NG G E L + M G++
Sbjct: 107 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVK 166
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF+ + AC A +E +F+SM+ +GI PG EHY ++ +LG+ G L EA++
Sbjct: 167 PDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 226
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------ 483
+ Q + +P A W+AL R+HG+++L + A + +L+P A P
Sbjct: 227 LLNQ-MAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAG 285
Query: 484 ---------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ 526
+ + K S ++ S++ F R +Y +++ L
Sbjct: 286 KWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMIL-- 343
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE+ YVPD + LHD+D+E KE L YHSE+LA+A+GL++ P P+RI KNLR+CGDC
Sbjct: 344 IKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDC 403
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A+K +S + R +I+RD+ FHHF++G CSC DYW
Sbjct: 404 HTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 440
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++NN +++MY K G A VF+ M D+ + SW ++ G NG +E L+LF +MR +
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G+ P++ AV SAC +E +H +KS G S ++ LV + KCG +
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIE 120
Query: 432 EAQQFIEQ 439
+A + +
Sbjct: 121 DANKVFDS 128
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 30/424 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQ--EGKVKEAIELMDKGVKADASCFYTLFEL 286
L++ +C +GD + S+ C EG +K +E++ KG++ D +L
Sbjct: 362 LSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 421
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + YE K+VH + ++ D N ++ Y KCGS+ DA F + +R + SW
Sbjct: 422 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 481
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI G A +G G L+LF +M G+ PN T +V AC A ++EA +F SMK
Sbjct: 482 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 541
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
FGI EHY ++ +LG+ G L +A + + +PF+ A W AL +R+H D +L
Sbjct: 542 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELV-NSMPFQANASVWGALLGASRVHKDPELG 600
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
A E + L+P K+ K + KK A+S ++ K +
Sbjct: 601 KLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDK 660
Query: 506 LVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P KL L + M ++ Y+P+ LHD+D+ KE L +HSERL
Sbjct: 661 VHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERL 720
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+ L+STP P+R+ KNLR+C DCH A K +S IV RE+I+RD RFHHF+DG CSC
Sbjct: 721 AVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSC 780
Query: 620 GDYW 623
GDYW
Sbjct: 781 GDYW 784
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 265 AIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
AIEL+ G+ + ++ + C ++ +++H + +++ D + +++
Sbjct: 194 AIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 253
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K + DA +VFD M+ R + W+ +I+G + G DE +F +RK GL N T
Sbjct: 254 MYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 313
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AV + S +A A ++ + G GL+ KC L +A + E+
Sbjct: 314 LAAVLKSTASLEA-ASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 371
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADN 356
+VH + + D+ + N ++ MYG G M DARRVFD ++R+ SW+ +++ Y N
Sbjct: 28 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 87
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
+ +Q+F +M G+QP E F V +AC + I +A +M G
Sbjct: 88 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMVVRMGYEKDVFT 146
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDH-AEELMVD 475
LV + K G + + I +K+P + W AL + ++G DH A EL++
Sbjct: 147 ANALVDMYVKMGRV-DIASVIFEKMP-DSDVVSWNALISGCVLNG----HDHRAIELLLQ 200
Query: 476 LDPSKADPKKIPTPPPKKRTA 496
+ S P K A
Sbjct: 201 MKSSGLVPNVFMLSSILKACA 221
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G++ F + C + + ++VH ++ D+ N +++MY K G
Sbjct: 99 EMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMG 158
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +F+ M D + SW+ +I+G NG ++L QM+ GL PN ++
Sbjct: 159 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILK 218
Query: 387 ACGSADAIE 395
AC A A +
Sbjct: 219 ACAGAGAFD 227
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y KC ++DA RVF+ + + + MI + G+ ++LF +M + GL+
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
P+ ++ +AC S A E+ +H +K +F ++ + G LV KCG + E
Sbjct: 410 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSI-E 464
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ LP E W A+ HG
Sbjct: 465 DAELAFSSLP-ERGVVSWSAMIGGLAQHG 492
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 217/396 (54%), Gaps = 40/396 (10%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA EL ++ G +A F +L + +++H L+S + +L + N +
Sbjct: 333 EEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNAL 392
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY +CG++ A +VF+ M D ++ SW MI G+A +G L+ F +M + G+ PNE
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNE 452
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T++AV SAC I E HF+SMK E GI P EHY +V +LG+ GHL EA + +
Sbjct: 453 VTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELV- 511
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PF+ A R+HG++DL HA E++++ DP DP
Sbjct: 512 NSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPH--DPAAYILLSNLHASAGQ 569
Query: 484 --------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQM 527
KK+ K S ++ ++++ +F + +Y + ++L ++
Sbjct: 570 WEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLAL--KI 627
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
KE Y+P T +VLHD+++E KEQ L HSE++A+AYG IST P+R+ KNLRVCGDCH
Sbjct: 628 KELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCH 687
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K S + +E+++RD RFHHFKDG CSC DYW
Sbjct: 688 TAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 253 LARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G ++A++L + G D + C ++ H ++S +
Sbjct: 117 ITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGL 176
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D+ + +++MY KC GS+ DAR+VFD M ++ SW +I GY +G D E ++
Sbjct: 177 DLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIE 236
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
LF +M + ++PN TF +V AC + I
Sbjct: 237 LFLEMVQGQVKPNHFTFSSVLKACANLSDI 266
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 263 KEAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EAIEL M +G VK + F ++ + C N ++V+ ++ + + N +
Sbjct: 232 REAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSL 291
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY +CG+M +AR+ FD + ++++ S++ ++N YA + +E +LF ++ G N
Sbjct: 292 ISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNA 351
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TF ++ S S AI + IH +KS G L+ + +CG++ A Q
Sbjct: 352 FTFASLLSGASSIGAIGKGEQIHSRILKS--GFKSNLHICNALISMYSRCGNIEAAFQVF 409
Query: 438 EQ 439
+
Sbjct: 410 NE 411
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 16/246 (6%)
Query: 261 KVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLN 315
K EAI ++++ G + CF +F C N + K + + L++ D+ +
Sbjct: 22 KAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVG 81
Query: 316 NKVIEMYGKC-GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+I+M+ K G + A +VFD M DR++ +W LMI + G + + LF M G
Sbjct: 82 CALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGY 141
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKC---GHL 430
P+ T V SAC + H MKS G+ LV + KC G +
Sbjct: 142 VPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKS--GLDLDVCVGCSLVDMYAKCVADGSV 199
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP 490
+A++ + ++P + + Y + G D E A EL +++ + P
Sbjct: 200 DDARKVFD-RMPVHNVMSWTAIITGYVQ-SGGCDRE--AIELFLEMVQGQVKPNHFTFSS 255
Query: 491 PKKRTA 496
K A
Sbjct: 256 VLKACA 261
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
R + SW +I+ YA+N E + F M + G PNE F VF AC + + I I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 401 F 401
F
Sbjct: 65 F 65
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 215/385 (55%), Gaps = 29/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ +G+K + +L CGN + ++ H + L + N +I MY KC
Sbjct: 676 LDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC 735
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G D VF+ M + + +W+ ++ G A NGLG E +++FEQM G+ P++ +FL V
Sbjct: 736 G-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVL 794
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC A ++E + HF SM ++GI P HY +V +LG+ G+L EA+ IE +P +P
Sbjct: 795 CACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIEN-MPVKP 853
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEE--------------LMVDLDPSKADPKKIPTPPP 491
+ WEAL RIH +++L E L+ +L S+ K+
Sbjct: 854 DSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRK 913
Query: 492 -------KKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALNQ----MKESTYVPDTRY 538
K IS + K++L F D +E AL + + + Y+PDT +
Sbjct: 914 LMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNF 973
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+++E K+ LLYHSE+LA+ +G++STP +P++IIKNLR+CGDCH +K MS++
Sbjct: 974 VLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTL 1033
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++I+RD RFHHF+DG CSCGDYW
Sbjct: 1034 RKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 42/217 (19%)
Query: 251 ADLARLCQEGKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A +A Q + +EA+EL+ + V +D+S F + C N E + +H ++
Sbjct: 525 AMIAGFVQNEESREALELLIELHRSGSVPSDSS-FTSALSACANIGDVEIGRVIHSLAIK 583
Query: 306 STIRGDLVLNNKVIEMYGKCGS-------------------------------MTDARRV 334
+ + + + N +I MY KCG+ + DAR V
Sbjct: 584 TGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVV 643
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F+ M R + SW +I+ Y G G+ L LF M G++PN+ T ++ SACG+ AI
Sbjct: 644 FEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAI 703
Query: 395 EEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGH 429
+ F ++ + G T ++G L+ + KCG+
Sbjct: 704 KLGE-QFHALIFKLGFD--TFLFVGNSLITMYFKCGY 737
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N I+ G+ G + +ARRVF+ M R + SW+ MINGY+ NG DE LF+ +
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF----VG 230
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESM 404
N +T+ + + IEEA FESM
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEAREVFESM 259
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+EG+++EA E+ + + + + + +NA+K+ D + + N
Sbjct: 245 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS----WNS 300
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
V+ Y C M++AR +FD M +R+ SW +MI+GY E +F +M + +P+
Sbjct: 301 VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPD 360
Query: 378 EQTFLAVFSACGSADAIE 395
+ F+ V SA D +E
Sbjct: 361 QSIFVVVLSAITGLDDLE 378
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+++ GD+V+ + ++ Y + GS+ A F+ M +R+ SW MI +A G D+ +
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
QL+E++ + T A+ +A I++A + F+ + ++P + ++
Sbjct: 448 QLYERVP----EQTVATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAG 498
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE--ELMVDLDPSKA 481
+ G L EA+ QK+P + +A W A+ I G + E+ E EL+++L S +
Sbjct: 499 YTQNGMLKEAKDLF-QKMPVKNSAS-WAAM-----IAGFVQNEESREALELLIELHRSGS 551
Query: 482 DP 483
P
Sbjct: 552 VP 553
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E A++V + +Q D+V N +I Y + G + +AR +FD +++ +W +++ GY
Sbjct: 188 EEARRVFNEMIQR----DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGY 243
Query: 354 ADNGLGDEGLQLFEQM 369
A G +E ++FE M
Sbjct: 244 AKEGRIEEAREVFESM 259
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 232/392 (59%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E ++ + +++ V+A + + C + E ++H +++T D+V+ N +
Sbjct: 221 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNAL 280
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCGS+ DAR VFD M + SW+ MI+GY+ +GLG E L++F++M++ ++P++
Sbjct: 281 IDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDK 340
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V SAC +A +++ +F SM + GI P EHY +V +LG+ GHL +A + I+
Sbjct: 341 LTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID 400
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------------- 478
+ +PF+P+ W AL IH DI+L + + +++++P
Sbjct: 401 E-IPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWD 459
Query: 479 -SKADPKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKEST 531
+ K + KK +S ++ + + F +P + + L+ L+ + K++
Sbjct: 460 NVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAG 519
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y+P+ VL D++ E KE+ L HSERLA+++G+I TP+ +P+RI+KNLR+C DCH AIK
Sbjct: 520 YIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIK 579
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S++V RE++VRD RFHHF++G CSCGDYW
Sbjct: 580 CISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 264 EAIEL---MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
EAIEL + + V + F ++ + C + ++H + ++ + D+ ++N +++
Sbjct: 122 EAIELFVRLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
+Y KCG M ++ +F R+ +W+ +I G+ G G++ L+LF M + +Q E T
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ + AC S A+E IH ++K+ F + L+ + KCG + +A+ +
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN--ALIDMYAKCGSIKDARLVFD- 298
Query: 440 KLPFEPTAEFWEALRNYARIHG 461
L + W A+ + +HG
Sbjct: 299 -LMNKQDEVSWNAMISGYSMHG 319
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ MY K + DA ++FD M +R+ S+ +I GYA++ E ++LF ++
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ L PN+ TF +V AC + + + IH +K G+ L+ V KCG
Sbjct: 132 REVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIK--IGLHSDVFVSNALMDVYAKCGR 188
Query: 430 L 430
+
Sbjct: 189 M 189
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 234/399 (58%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+V EA+ E+ G+K D+ ++ +AK +H ++S + ++
Sbjct: 427 QNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIF 486
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG++ AR++FD ++DR + +W+ MI+GY +GLG L LF++M+K
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ T+L+V SAC + ++E HF+SMK ++G+ P +HY +V +LG+ G + EA
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
FIE +P P + A+ +IH +I++ + A + + +L+P +
Sbjct: 607 WDFIEN-MPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYAS 665
Query: 481 -------ADPKKIPTPPPKKRT-AISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
A+ +K K+T S+++ ++ + F ++ +Y E+L +
Sbjct: 666 TSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEEL--V 723
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++K + YVPDT +L D++ + +EQ L HSE+LAIA+GL++T T + + KNLRVCG
Sbjct: 724 YEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCG 782
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K +S + GRE+IVRD +RFHHFK+G CSCGDYW
Sbjct: 783 DCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTL 283
Q+++ ++ P D V ++ +A Q G K+A+EL+ D+G + D+ T+
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTI--IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTV 254
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ K +H Y +++ + ++ + +MY KCGS+ AR +FD M +++
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
SW+ M++GY NG ++ + +FE+M + G+ P T + AC +E F+H
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ ++AI +++++G+ C + E K VH + Q + D+
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC + A +F+++ R+ SW+ MI GYA NG E L F +M+ LG
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P+ T ++V A A +IH ++S + LV + KCG +
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRS--CLDKNIFVTTALVDMYSKCGAIHM 503
Query: 433 AQQFIEQ 439
A++ +
Sbjct: 504 ARKLFDM 510
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L ++CG+ + K++H + ++ ++ V+ MY KC + DA ++FD M
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
+R + SW+ +I G++ NG + L+L +M+ G +P+ T + V A +
Sbjct: 210 ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKS 269
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
IH ++++ G + L + KCG + A+ +
Sbjct: 270 IHGYAIRA--GFAKLVNISTALADMYSKCGSVETARLIFD 307
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L ELC + K ++ +++ + + + K++ ++ K GS+ +A RVF+ + D+
Sbjct: 54 VLLELCTSMK---ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIH 400
+H M+ GYA N + L +MR ++P F + CG +AD IH
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ + + F + G+V + KC + +A + ++
Sbjct: 171 GQLITNSF--AANVFAMTGVVNMYAKCRQIDDAYKMFDR 207
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 227/406 (55%), Gaps = 38/406 (9%)
Query: 253 LARLCQEGKVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
+A Q G EAI L K G+K +A + C + + K +H+ ++
Sbjct: 126 IALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRM 185
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + +++MY KCG + A R F + ++++ SW MI GY +G G E L++F
Sbjct: 186 GLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIF 245
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M++ GL+PN TF++V +AC A ++E + +MK EFGI G EHY +V +LG+
Sbjct: 246 TEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGR 305
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA I++ + +P A W AL + RIH +++L + + + + +LD S +
Sbjct: 306 AGCLDEAYSLIKE-MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVL 364
Query: 482 ------------DPKKIPTPPPKKRT----AISILDGKSRLVEF--------RNPTLYRD 517
D ++I +R S + K ++ F ++ +Y
Sbjct: 365 LSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSY 424
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
EKL L +M+E+ YVP+T VLHD+D+E KE AL HSE+LA+A+ L+++ R+ + II
Sbjct: 425 LEKL--LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHII 482
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVC DCH A+K +++I RE+I+RD +RFHHFKDG CSC DYW
Sbjct: 483 KNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 316 NKVIEMYGKCGS--MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL- 372
N +++ Y K GS + AR+VFD M +R + SW+ MI YA NG+ E + L+ +M +
Sbjct: 91 NTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 149
Query: 373 -GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL- 430
G++ N AV AC A AI+ H + G+ +V + KCG +
Sbjct: 150 GGIKCNAVALSAVLLACAHAGAIQTGK-HIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 208
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ F + K E W A+ +HG
Sbjct: 209 MASRAFRKIK---EKNILSWSAMITGYGMHG 236
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 205/355 (57%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H ++ R DL +NN +I MY KCG+ A +VF+ M D ++ +W +ING+A
Sbjct: 486 GEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAK 545
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G + L+LF M + G++PN+ T++AV SAC I+EA+ HF SM+ GI P E
Sbjct: 546 HGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRME 605
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G L EA +FI +PF+ A W R+H + L +HA +++++
Sbjct: 606 HYACMVDLLGRSGLLSEAIEFI-NSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILE 664
Query: 476 LDP---------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFR---- 510
+P A K + K S ++ ++++ +F
Sbjct: 665 REPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDT 724
Query: 511 -NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P + EKL L ++K YVP+T +VLHD++ E KEQ L HSE+LA+A+ LIST
Sbjct: 725 LHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALIST 784
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P P+R+ KNLRVCGDCH AIK +S + GRE++VRD RFHH KDG CSC DYW
Sbjct: 785 PNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 253 LARLCQEGKVKEAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+ RL Q G EAI+L + G D L +C ++ K++H + ++S
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG--DEGLQL 365
+ DL + +++MY KCG + +AR+VFD M + ++ SW ++NGY G G E +++
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRM 352
Query: 366 FEQM-RKLGLQPNEQTFLAVFSACGSA---DAIEEAFIHFESMKSEFGISPGTEHYLGLV 421
F M + G+ PN TF V AC S D E+ +H +++K G+S GLV
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQ--VHGQTIK--LGLSAIDCVGNGLV 408
Query: 422 GVLGKCGHLFEAQQ----FIEQKLPFEPTAE 448
V K G + A++ E+ L E +
Sbjct: 409 SVYAKSGRMESARKCFDVLFEKNLVSETVVD 439
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 264 EAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNK 317
+A+E+ D+ GV + CF + C +++ + + L++ + + +
Sbjct: 138 KAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCE 197
Query: 318 VIEMYGKCGSMTD---ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF-EQMRKLG 373
+I+M+ K S+ D AR+VFD M ++++ +W LMI A G DE + LF E + G
Sbjct: 198 LIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSG 257
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF-------GISPGTEHYLGLVGVLGK 426
P+ T + S C A I F S+ E G+ LV + K
Sbjct: 258 YVPDRFTLTGLISVC--------AEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAK 309
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRN-YAR 458
CG + EA++ + E W AL N Y R
Sbjct: 310 CGLVQEARKVFDGMR--EHNVMSWTALVNGYVR 340
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 209/355 (58%), Gaps = 29/355 (8%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ +H Y ++ + D+ + +I+MY KCG ++ ARR+FD DR + +W+ MI+GY
Sbjct: 341 ARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGS 400
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G ++LFE+M+ G PNE TFL+V +AC A ++E +F SMK ++G+ PG E
Sbjct: 401 HGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGME 460
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G L EA FI + +P EP + A+ ++H +++L + + +++ +
Sbjct: 461 HYGTMVDLLGRAGKLDEAWSFI-KNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFE 519
Query: 476 LDPSKA-----------------DPKKIPTPPPKKRT----AISILDGKSRLVEFRNPTL 514
L P + D ++ T KK SI+ K+ + F + +
Sbjct: 520 LGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGST 579
Query: 515 YRDDEK------LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
K K + ++K+ YVPDT + HD++ + K Q L HSE+LAIAYGLI T
Sbjct: 580 NHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRT 638
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T ++I KNLRVC DCHNA K++S + GRE+I+RD +RFHHFKDGKCSCGDYW
Sbjct: 639 APGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 237 NQCPAGDQV-LPPSVADLARLCQEGKVKEAIELM---DKGVKADASCFYTLFELCGNPKW 292
++ P+ D+V VA AR EA+ M + G + D+ ++ C + +
Sbjct: 75 DRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARA 134
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
++VH + L++ + + ++ V++ Y KCG++ AR VFD M R+ SW+ MI+G
Sbjct: 135 LHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
YADNG E + LF +M + G+ + + LA ACG ++E + G+S
Sbjct: 195 YADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVR-RVHELLVRVGLSS 253
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
L+ KC A Q + L + T W A+
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNE-LGNKKTRISWNAM 293
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L +LC + VH + + + + + MY KC DARRVFD M
Sbjct: 19 FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMP 78
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR--KLGLQPNEQTFLAVFSACGSADAIEEA 397
R +W+ ++ GYA NGL ++ +M+ + G +P+ T ++V AC A A+
Sbjct: 79 SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHAC 138
Query: 398 F-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
+H ++++ G+ ++ KCG + EA + + +P + + + Y
Sbjct: 139 REVHAFALRA--GLDELVNVSTAVLDAYCKCGAV-EAARAVFDCMPVRNSVSWNAMIDGY 195
Query: 457 A 457
A
Sbjct: 196 A 196
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 260 GKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+ L + +GV + + CG + + ++VH+ ++ + ++ +
Sbjct: 199 GNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVT 258
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I Y KC A +VF+ + ++ + SW+ MI G+ N ++ +LF +M+ +
Sbjct: 259 NALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENV 318
Query: 375 QPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P+ T ++V A +D ++ +IH S++ + + L+ + KCG + A
Sbjct: 319 RPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQ--LDQDVYVLTALIDMYSKCGRVSIA 376
Query: 434 QQFIE 438
++ +
Sbjct: 377 RRLFD 381
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 233/399 (58%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+V EA+ E+ G+K D+ ++ +AK +H ++S + ++
Sbjct: 427 QNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIF 486
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG++ AR++FD ++DR + +W+ MI+GY +GLG L LF++M+K
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ T+L+V SAC + ++E HF+SMK ++G+ P +HY +V +LG+ G + EA
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
FIE +P P + A +IH +I++ + A + + +L+P +
Sbjct: 607 WDFIEN-MPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYAS 665
Query: 481 -------ADPKKIPTPPPKKRT-AISILDGKSRLVEFRNPT--------LYRDDEKLKAL 524
A+ +K K+T S+++ ++ + F + + +Y E+L +
Sbjct: 666 TSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEEL--V 723
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++K + YVPDT +L D++ + +EQ L HSE+LAIA+GL++T T + + KNLRVCG
Sbjct: 724 YEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCG 782
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K +S + GRE+IVRD +RFHHFK+G CSCGDYW
Sbjct: 783 DCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTL 283
Q+++ ++ P D V ++ +A Q G K+A+EL+ D+G + D+ T+
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTI--IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTV 254
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ K +H Y +++ + ++ + +MY KCGS+ AR +FD M +++
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
SW+ M++GY NG ++ + +FE+M + G+ P T + AC +E F+H
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ ++AI +++++G+ C + E K VH + Q + D+
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC + A +F+++ R+ SW+ MI GYA NG E L F +M+ LG
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P+ T ++V A A +IH ++S + LV + KCG +
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRS--CLDKNIFVTTALVDMYSKCGAIHM 503
Query: 433 AQQFIEQ 439
A++ +
Sbjct: 504 ARKLFDM 510
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L ++CG+ + K++H + ++ ++ V+ MY KC + DA ++FD M
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
+R + SW+ +I G++ NG + L+L +M+ G +P+ T + V A +
Sbjct: 210 ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKS 269
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
IH ++++ G + L + KCG + A+ +
Sbjct: 270 IHGYAIRA--GFAKLVNISTALADMYSKCGSVETARLIFD 307
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L ELC + K ++ +++ + + + K++ ++ K GS+ +A RVF+ + D+
Sbjct: 54 VLLELCTSMK---ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIH 400
+H M+ GYA N + L +MR ++P F + CG +AD IH
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ + + F + G+V + KC + +A + ++
Sbjct: 171 GQLITNSF--AANVFAMTGVVNMYAKCRQIDDAYKMFDR 207
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 211/380 (55%), Gaps = 29/380 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ D F TL + E K++H ++ D + +++MY KCGS+ DA
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDA 1254
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
RVF M R + W+ M+ G A +G DE L LF M+ G+QP++ TF+ V SAC +
Sbjct: 1255 YRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHS 1314
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
EA+ +F++M +GI+P EHY LV LG+ G + EA+ I +PF+ +A +
Sbjct: 1315 GLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVI-ASMPFKASASMYR 1373
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPP 490
AL R GD + + ++ LDPS + +
Sbjct: 1374 ALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKN 1433
Query: 491 PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQM--KESTYVPDTRYVLHDI 543
KK S +D K+++ F +P EK++ L + +E +YVPDT + L D+
Sbjct: 1434 VKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDV 1493
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E KE+AL YHSE+LAIA+GLISTP +R+IKNLRVCGDCH+AIK +S++ RE+++
Sbjct: 1494 EEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVL 1553
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF++G CSCGDYW
Sbjct: 1554 RDANRFHHFRNGTCSCGDYW 1573
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 261 KVKEAIELM-DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
K E LM + G+ D T + G + K++ Y ++ DL +++ V+
Sbjct: 1082 KALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVL 1141
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG M +A +F ++ +W MI+GY +NG D L ++ MR G+QP+E
Sbjct: 1142 DMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEY 1201
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
TF + A A+E+ IH +K ++ + +H++G LV + KCG + +A +
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCGSVQDAYR- 1256
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDID 464
+ +K+ FW A+ HG +D
Sbjct: 1257 VFRKMDVRKVV-FWNAMLLGLAQHGHVD 1283
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L G++ AI+ L+ + D+ + + +++H ++S+
Sbjct: 866 LTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSF 925
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++N ++ MY K G + A + F + + + SW+ MI+ YA N L E + F
Sbjct: 926 APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRD 985
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIE----EAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+ + GL+P++ T +V AC + D E + +H ++K GI + L+ +
Sbjct: 986 LLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKC--GIINDSFVSTALIDLY 1043
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
K G + EA+ + K F+ + W A+
Sbjct: 1044 SKGGKMDEAEFLLHGKYDFDLAS--WNAI 1070
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 34/190 (17%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA- 354
K+ H + S D L N +I MY KCGS+ AR+VFD +DR + +W+ ++ YA
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 355 ------DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
+N L EG +LF +R+ G T A + F+ +
Sbjct: 690 FADSSYENVL--EGFRLFGLLREFGFSITRLT-----LAPLLKLCLLSGFVQVSETVHGY 742
Query: 409 GISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW-------------- 450
+ G E L LV + K G + +A+ + K+P E A W
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFD-KMP-ERDAVLWNVMLKAYVENSFQD 800
Query: 451 EALRNYARIH 460
EALR ++ H
Sbjct: 801 EALRFFSAFH 810
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++ VH Y ++ DL ++ ++ +Y K G + AR +FD M +R W++M+ Y +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
N DE L+ F + G P+ V S
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNS 830
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNP---KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
+L+ G+K D ++ C +++ +VH Y ++ I D ++ +I++Y
Sbjct: 985 DLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K G M +A + D + SW+ ++ GY + + L+ F M ++G+ +E T
Sbjct: 1045 KGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLAT 1104
Query: 384 VFSACG 389
A G
Sbjct: 1105 AIKASG 1110
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 211/380 (55%), Gaps = 29/380 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ D F TL + E K++H ++ D + +++MY KCGS+ DA
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDA 1254
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
RVF M R + W+ M+ G A +G DE L LF M+ G+QP++ TF+ V SAC +
Sbjct: 1255 YRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHS 1314
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
EA+ +F++M +GI+P EHY LV LG+ G + EA+ I +PF+ +A +
Sbjct: 1315 GLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVI-ASMPFKASASMYR 1373
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPP 490
AL R GD + + ++ LDPS + +
Sbjct: 1374 ALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKN 1433
Query: 491 PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQM--KESTYVPDTRYVLHDI 543
KK S +D K+++ F +P EK++ L + +E +YVPDT + L D+
Sbjct: 1434 VKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDV 1493
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E KE+AL YHSE+LAIA+GLISTP +R+IKNLRVCGDCH+AIK +S++ RE+++
Sbjct: 1494 EEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVL 1553
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF++G CSCGDYW
Sbjct: 1554 RDANRFHHFRNGTCSCGDYW 1573
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 261 KVKEAIELM-DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
K E LM + G+ D T + G + K++ Y ++ DL +++ V+
Sbjct: 1082 KALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVL 1141
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG M +A +F ++ +W MI+GY +NG D L ++ MR G+QP+E
Sbjct: 1142 DMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEY 1201
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
TF + A A+E+ IH +K ++ + +H++G LV + KCG + +A +
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCGSVQDAYR- 1256
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDID 464
+ +K+ FW A+ HG +D
Sbjct: 1257 VFRKMDVRKVV-FWNAMLLGLAQHGHVD 1283
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L G++ AI+ L+ + D+ + + +++H ++S+
Sbjct: 866 LTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSF 925
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++N ++ MY K G + A + F + + + SW+ MI+ YA N L E + F
Sbjct: 926 APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRD 985
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIE----EAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+ + GL+P++ T +V AC + D E + +H ++K GI + L+ +
Sbjct: 986 LLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKC--GIINDSFVSTALIDLY 1043
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
K G + EA+ + K F+ + W A+
Sbjct: 1044 SKGGKMDEAEFLLHGKYDFDLAS--WNAI 1070
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 34/190 (17%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA- 354
K+ H + S D L N +I MY KCGS+ AR+VFD +DR + +W+ ++ YA
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 355 ------DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
+N L EG +LF +R+ G T A + F+ +
Sbjct: 690 FADSSYENVL--EGFRLFGLLREFGFSITRLT-----LAPLLKLCLLSGFVQVSETVHGY 742
Query: 409 GISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW-------------- 450
+ G E L LV + K G + +A+ + K+P E A W
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFD-KMP-ERDAVLWNVMLKAYVENSFQD 800
Query: 451 EALRNYARIH 460
EALR ++ H
Sbjct: 801 EALRFFSAFH 810
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++ VH Y ++ DL ++ ++ +Y K G + AR +FD M +R W++M+ Y +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 356 NGLGDEGLQLFEQMRKLGLQPN 377
N DE L+ F + G P+
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPD 817
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNP---KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
+L+ G+K D ++ C +++ +VH Y ++ I D ++ +I++Y
Sbjct: 985 DLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K G M +A + D + SW+ ++ GY + + L+ F M ++G+ +E T
Sbjct: 1045 KGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLAT 1104
Query: 384 VFSACG 389
A G
Sbjct: 1105 AIKASG 1110
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 215/392 (54%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K ++++ KG++ D+ +L C + YE K+VH + ++ D+ N +
Sbjct: 492 EDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNAL 551
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ Y KCGS+ DA F + +R + SW MI G A +G G L LF +M G+ PN
Sbjct: 552 VYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNH 611
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T +V SAC A +++A +FESMK FGI EHY ++ +LG+ G L +A + +
Sbjct: 612 ITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELV- 670
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PF+ A W AL +R+H D +L A E + L+P K+
Sbjct: 671 NNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWD 730
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF----RNPTLYRDD-EKLKAL-NQMKEST 531
K + KK A+S ++ K ++ F ++ + RD KL L + M ++
Sbjct: 731 EMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAG 790
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVP+ LHD+D+ KE L +HSERLA+A+ LISTP+ P+R+ KNLR+C DCH A K
Sbjct: 791 YVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFK 850
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S+IV RE+I+RD RFHHF +G CSCGDYW
Sbjct: 851 YISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ G+ + ++ + C + +++H + +++ D + +++MY K
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFLA 383
G + DAR+VFD M R + W+ +I+G + +G E L LF +MRK L L N T +
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL-FEAQQFIEQK 440
V + S++AI ++ + G+ + GL+ KCG L + + F E +
Sbjct: 415 VLKSTASSEAICHTR-QVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESR 471
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + E ++VH +++ D+ N +++MY K G + A VF+ M
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP 267
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+ SW+ I+G +G L+L QM+ GL PN T +V AC A A
Sbjct: 268 AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 399 IHFESMKSEFGISPGTEHY-LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE--FWEAL 453
IH +K+ ++ E +GLV + K G L +A++ + F P + W AL
Sbjct: 328 IHGFMVKA---VADFDEFVAVGLVDMYAKHGFLDDARKVFD----FMPRRDLILWNAL 378
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA----DRSMDSWHLMINGY 353
+VH + + + D+ + N ++ +YG G + +ARR+FD +R+ SW+ MI+ Y
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISP 412
N + + +F +M G +PNE F V +AC GS D +H +++ +
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDH-AEE 471
T + LV + K G + E + +K+P W A + HG DH A E
Sbjct: 241 FTAN--ALVDMYSKLGDI-EMAATVFEKMPAADVVS-WNAFISGCVTHG----HDHRALE 292
Query: 472 LMVDLDPSKADPKKIPTPPPKKRTA 496
L++ + S P K A
Sbjct: 293 LLLQMKSSGLVPNVFTLSSVLKACA 317
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ ++VH + + D + N +I+ Y KCG + A +VF + S M+ +
Sbjct: 427 HTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALS 486
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG 413
G++ ++LF QM + GL+P+ ++ +AC S A E+ +H +K +F
Sbjct: 487 QCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQF----T 542
Query: 414 TEHYLG--LVGVLGKCGHLFEAQQ 435
++ + G LV KCG + +A
Sbjct: 543 SDVFAGNALVYAYAKCGSIEDADM 566
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + L+S + +N ++ +Y +C + AR VFD + D SW ++ Y++NG+
Sbjct: 26 LHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGM 83
Query: 359 GDEGLQLFEQMRKLGLQPNE 378
+ L F MR G+ NE
Sbjct: 84 PRDALLAFRAMRGRGVPCNE 103
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 225/402 (55%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ EA+ L + V A A F ++ C + K++H Y L+
Sbjct: 279 VAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + + +++MY KCG++ AR++FD M SW +I G+A +G G E + LFE+
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ G++PN+ F+AV +AC ++EA+ +F SM +G++ EHY + +LG+ G
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 458
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--------------LMV 474
L EA FI K+ EPT W L + +H +++L + E LM
Sbjct: 459 KLEEAYDFI-SKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMC 517
Query: 475 DLDPSKADPK-------KIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
++ S K ++ +K+ A S ++ K++ F +P++ R +E LK
Sbjct: 518 NMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLK 577
Query: 523 A-LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
A + QM++ YV DT VLHD+D+E K + L HSERLA+A+G+I+T T +R+ KN+R
Sbjct: 578 AVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 637
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+C DCH AIK +S+I RE+IVRDN RFHHF G CSCGDYW
Sbjct: 638 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLF 284
+++V P D V +V +A Q G ++A+ E+ +K DA ++
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTV--IAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVL 213
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
+ K++H Y ++ I D+ + + +++MY K + D+ RVF H+ R
Sbjct: 214 PIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSI 273
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFES 403
SW+ ++ GY NG +E L+LF QM ++P F +V AC + +H
Sbjct: 274 SWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYV 333
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ FG + LV + KCG++ A++ ++ + + W A+ +HG
Sbjct: 334 LRGGFGRNIFIAS--ALVDMYSKCGNIQAARKIFDRMNLHDEVS--WTAIIMGHALHG 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 60/120 (50%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+ G D + F ++ + C + VH + ++ + DL N ++ MY K
Sbjct: 94 VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKL 153
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ R+VF+ M + + S++ +I GYA +G+ ++ L++ +M L+P+ T +V
Sbjct: 154 LGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVL 213
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 215/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ L + +KA A ++ CG E+ + VH Y + I+ ++
Sbjct: 233 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVH 292
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCGS+ DAR VFD + D+ + +W+ MI GYA +G E LQLF+ M ++G
Sbjct: 293 VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 352
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L P TF+ + SACG + + E + F MK E+GI P EHY +V +LG+ GH+ +A
Sbjct: 353 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 412
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ + + + EP W L R+HG I L + EL+VD + + +
Sbjct: 413 YELV-KNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 471
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKALN-Q 526
+ KK S ++ +++ EF L K L+ +N
Sbjct: 472 VGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGW 531
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K Y P T VLHDI + KE++L HSE+LAIA+GLI+T T ++I+KNLRVC DC
Sbjct: 532 LKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADC 591
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H K++S+I GR+++VRD RFHHF +G CSCGDYW
Sbjct: 592 HEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 42/207 (20%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +GV+ +A F ++ +LC P E K +H ++ DL + ++++Y + G
Sbjct: 118 QMLTQGVEPNAFTFSSILKLC--P--IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGG 173
Query: 327 SMTDARRVFDHMADRSMDS-------------------------------WHLMINGYAD 355
+ A+++FD M ++S+ S W++MI+GY
Sbjct: 174 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 233
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISP 412
NG+ +E L LF +M K +PNE T L+V SACG A+E ++H E+ +F +
Sbjct: 234 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 293
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
GT LV + KCG L +A+ ++
Sbjct: 294 GT----ALVDMYSKCGSLEDARLVFDK 316
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+LN K+ Y G + + +F + S+ W +I+G+A GL ++ L + QM
Sbjct: 63 ILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 122
Query: 373 GLQPNEQTFLAVFSAC----GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
G++PN TF ++ C G A +H +++K G GL+ V + G
Sbjct: 123 GVEPNAFTFSSILKLCPIEPGKA-------LHSQAVK--LGFDSDLYVRTGLLDVYARGG 173
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID----LEDHAEE 471
+ AQQ + +P + L YA+ HG++D L D EE
Sbjct: 174 DVVSAQQLFDT-MPEKSLVSLTAMLTCYAK-HGELDAARVLFDGMEE 218
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 215/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ L + +KA A ++ CG E+ + VH Y + I+ ++
Sbjct: 167 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVH 226
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCGS+ DAR VFD + D+ + +W+ MI GYA +G E LQLF+ M ++G
Sbjct: 227 VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 286
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L P TF+ + SACG + + E + F MK E+GI P EHY +V +LG+ GH+ +A
Sbjct: 287 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 346
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ + + + EP W L R+HG I L + EL+VD + + +
Sbjct: 347 YELV-KNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 405
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKALN-Q 526
+ KK S ++ +++ EF L K L+ +N
Sbjct: 406 VGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGW 465
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K Y P T VLHDI + KE++L HSE+LAIA+GLI+T T ++I+KNLRVC DC
Sbjct: 466 LKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADC 525
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H K++S+I GR+++VRD RFHHF +G CSCGDYW
Sbjct: 526 HEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
LV ++ Y K G + AR +FD M +R W++MI+GY NG+ +E L LF +M K
Sbjct: 124 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 183
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCG 428
+PNE T L+V SACG A+E ++H E+ +F + GT LV + KCG
Sbjct: 184 AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT----ALVDMYSKCG 239
Query: 429 HLFEAQQFIEQ 439
L +A+ ++
Sbjct: 240 SLEDARLVFDK 250
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 202/356 (56%), Gaps = 35/356 (9%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
+D TI LVL +++MY KCG++T AR VFD+M +++ SW+ MI+GY+ +G
Sbjct: 480 YDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCS 539
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG 419
E L L+E+M K G+ PNE TFLA+ SAC +EE F SM+ ++ I EHY
Sbjct: 540 KEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 599
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS 479
+V +LG+ G L +A++F+E K+P EP W AL R+H D+D+ A + + +LDP
Sbjct: 600 MVDLLGRAGRLEDAKEFVE-KMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQ 658
Query: 480 KADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF--------R 510
P I + KK +S ++ S + F +
Sbjct: 659 NPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPK 718
Query: 511 NPTLYRDDEKLKALNQMKESTYVPDTRYVLH---DIDQEAKEQALLYHSERLAIAYGLIS 567
+Y + L Q K Y+PDT ++L DI +E +E+ LL HSERLA++ GLIS
Sbjct: 719 TEEIYNNLRHLTL--QSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLIS 776
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P ++ +R+ KNLR+CGDCH A K +S+I GR +I RD RFHHF++GKCSCGDYW
Sbjct: 777 LPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ G++ D F TL LC N + +++H + +++ I ++++ +++ MY +CG +
Sbjct: 271 EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN 330
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
A+ +F+ MA+R+ SW+ MI GY NG E L+LF+QM+ G++P+ + ++ S+C
Sbjct: 331 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 390
Query: 390 SADAIEEA-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
S ++ FI +M+ E GI + LV + KCG + A + +Q + +
Sbjct: 391 SLSDSQKGRELHNFIVRNTMEEE-GILQ-----VVLVDMYAKCGSMDYAWKVYDQTIKKD 444
Query: 445 PTAEFWEAL 453
W ++
Sbjct: 445 RNTALWNSI 453
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ GV D F + +CG + + K+VH + +GD + N +I+MY KC
Sbjct: 166 MLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD 225
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL--GLQPNEQTFLAVF 385
+VFD M +R+ +W+ +I+ A G ++ L LF +M++ G+QP++ TF +
Sbjct: 226 EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLL 285
Query: 386 SACG 389
+ C
Sbjct: 286 TLCA 289
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD---ARRVFD 336
+ +L + C + ++ K +H + + D L K++ +Y + G + D AR++F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
M +R++ +W+ MI YA E +F++M K+G+ P+ TF + CG+
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGA 187
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 219/397 (55%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
QE + KE + ++M + ++ + S C + E + + Y + +R +
Sbjct: 245 QESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVR 304
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I+MY KCGS+ A VF M ++++ +W MING A NG G + L LF QM G
Sbjct: 305 LGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQG 364
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PNE TF+ + +AC + ++E F SM S +G+ P H+ +V + G+ G L +A
Sbjct: 365 VKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQA 424
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
Q I + +PF+P + W AL N RIHGD +L + + +++LDP+
Sbjct: 425 QTVI-KSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAA 483
Query: 481 -------ADPKKIPTPPPKKRT-AISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ- 526
A+ +++ +T S +D + EF +P L KL ++Q
Sbjct: 484 CGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQE 543
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K + Y PDT VL D+D+E KE AL +HSE+LAIA+GLI T T +RI KNLRVC DC
Sbjct: 544 LKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADC 603
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A K++S+I RE+IVRD RFHHF+DG CSC D+W
Sbjct: 604 HSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y KCG ARR+F+ M DR + SW +MINGY EGL LF+ M ++
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIE 265
Query: 376 PNEQTFLAVFSACGSADAIEEA-FI--HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
PNE + SAC A+E+ +I + E + GT L+ + KCG +
Sbjct: 266 PNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGT----ALIDMYSKCGSVER 321
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A + + E W A+ N I+G
Sbjct: 322 ALEVFHKMK--EKNVLAWSAMINGLAING 348
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 214/397 (53%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ L + +KA A ++ CG E+ + VH Y + I+ ++
Sbjct: 180 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVH 239
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCGS+ DAR VFD + D+ + +W+ MI GYA G E LQLF+ M ++G
Sbjct: 240 VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMG 299
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L P TF+ + SACG + + E + F MK E+GI P EHY +V +LG+ GH+ +A
Sbjct: 300 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 359
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ + + + EP W L R+HG I L + EL+VD + + +
Sbjct: 360 YELV-KNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 418
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKALN-Q 526
+ KK S ++ +++ EF L K L+ +N
Sbjct: 419 VGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGW 478
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K Y P T VLHDI + KE++L HSE+LAIA+GLI+T T ++I+KNLRVC DC
Sbjct: 479 LKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADC 538
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H K++S+I GR+++VRD RFHHF +G CSCGDYW
Sbjct: 539 HEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 42/207 (20%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +GV+ +A F ++ +LC P E K +H ++ DL + ++++Y + G
Sbjct: 65 QMLTQGVEPNAFTFSSILKLC--P--IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGG 120
Query: 327 SMTDARRVFDHMADRSMDS-------------------------------WHLMINGYAD 355
+ A+++FD M ++S+ S W++MI+GY
Sbjct: 121 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 180
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISP 412
NG+ +E L LF +M K +PNE T L+V SACG A+E ++H E+ +F +
Sbjct: 181 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 240
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
GT LV + KCG L +A+ ++
Sbjct: 241 GT----ALVDMYSKCGSLEDARLVFDK 263
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y G + + +F + S+ W +I+G+A GL ++ L + QM G++PN TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 382 LAVFSAC----GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
++ C G A +H +++K G GL+ V + G + AQQ
Sbjct: 79 SSILKLCPIEPGKA-------LHSQAVK--LGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDID----LEDHAEE 471
+ +P + L YA+ HG++D L D EE
Sbjct: 130 DT-MPEKSLVSLTAMLTCYAK-HGELDAARVLFDGMEE 165
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 226/408 (55%), Gaps = 33/408 (8%)
Query: 248 PSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P A ++ Q+GK +E I + GV AD + F ++ C N +++H
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++S ++ + +++ Y KCG MTDA + F M +R+ SW+ +I+ YA NG D L
Sbjct: 470 IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTL 529
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
F+QM + G +P+ +FL+V SAC +EEA HF SM + ++P EHY +V V
Sbjct: 530 NSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDV 589
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL-DPSKAD 482
L + G EA++ + + +PFEP+ W ++ N RIH + +L A + + ++ D A
Sbjct: 590 LCRNGRFDEAEKLMTE-MPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAA 648
Query: 483 P---------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYR 516
P K + +K A S ++ K + F +P + +
Sbjct: 649 PYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKK 708
Query: 517 DDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
K+ AL+ +M++ Y PDT LHD+D+ K ++L YHSER AIA+ L++TP +P+
Sbjct: 709 ILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIV 768
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLR C DCH AIK++S+IV RE+IVRD+ RFHHFKDG CSCGDYW
Sbjct: 769 VMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++MY KC +A+++FD++A +S W MI+ Y G +EG+ +F MR+ G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHL 430
+ ++ TF ++ AC + +I +H ++S F + G+ L+ KCG +
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGS----ALLDTYAKCGCM 494
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+A + + +P E + W AL + +G++D
Sbjct: 495 TDAIKSFGE-MP-ERNSVSWNALISAYAQNGNVD 526
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + KEA L G++ D TL G + ++H + ++ +L+
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++ Y K + A ++F HM ++ +++ ++ GY++ GL +E ++LF ++ G
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236
Query: 374 LQPNEQTFLAVFSACGSAD 392
++P++ TF A+ SA D
Sbjct: 237 IKPSDFTFAALLSAAVGLD 255
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H F Q + + LN +I + K G ++ AR +FD M +R+ SW ++I GY +
Sbjct: 63 HQVFDQMPAKNTISLN-MMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQS 121
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACG---SADAIEEAFIHFESMKSEFGISPGTEH 416
E +L+ MR+ G++P+ T + + S G + + I + H + E+ +
Sbjct: 122 KEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCN-- 179
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
LV K L+ A Q + L + T F + Y+ + L + A EL ++L
Sbjct: 180 --SLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYS----NEGLNEEAIELFLEL 232
Query: 477 DPSKADP 483
S P
Sbjct: 233 HNSGIKP 239
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 259 EGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
EG +EAIEL + G+K F L + ++VH + L++ ++ +
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +++ Y K + + ++F M + S++++I YA NG E LF +++
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF 338
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ F + S S+ + IH +++ E+ LV + KC EA
Sbjct: 339 DRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEA 396
Query: 434 QQFIE 438
Q+ +
Sbjct: 397 QKIFD 401
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 209/394 (53%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K +E++ KG++ D +L C + YE K+VH + ++ D+ N +
Sbjct: 489 EDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNAL 548
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ Y KCGS+ DA F + D+ + SW MI G A +G G L +F +M + PN
Sbjct: 549 VYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNH 608
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T +V AC A ++EA +F SMK FGI EHY ++ +LG+ G L +A + +
Sbjct: 609 ITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV- 667
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PFE A W AL +R+H D +L A E + L+P K+
Sbjct: 668 NSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWD 727
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
K + KK A+S ++ K R+ F R +Y E+L L M +
Sbjct: 728 EVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDL--MSK 785
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVP+ LHD+D+ KE L +HSERLA+A+ LISTPA P+R+ KNLR+C DCH A
Sbjct: 786 AGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVA 845
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+IV RE+I+RD RFHHF DG CSCGDYW
Sbjct: 846 FKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 9/188 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADN 356
+VH + + + GD+ + N ++ MYG G + +ARRVFD A DR+ SW+ M++ + N
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTE 415
+ ++LF +M G++PNE F V +AC GS D +H +++ + T
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+ LV + K G + A + K+P W A + +HG + HA EL++
Sbjct: 241 N--ALVDMYSKLGDIHMA-ALVFGKVPKTDVVS-WNAFISGCVLHGH---DQHALELLLQ 293
Query: 476 LDPSKADP 483
+ S P
Sbjct: 294 MKSSGLVP 301
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H + +++ D + +++MY K G + DAR+VF+ + + + W+ +I+G +
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G E L LF +MRK G N T AV + S +AI + ++ + G +
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT-TQVHALAEKIGFLSDSHV 443
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQ 439
GL+ KC L A + E+
Sbjct: 444 VNGLIDSYWKCNCLRYANKVFEE 466
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ + + +A+EL + GV+ + F + C + E +KVH +++
Sbjct: 174 MSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGY 233
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ N +++MY K G + A VF + + SW+ I+G +G L+L Q
Sbjct: 234 DKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 369 MRKLGLQPNEQTFLAVF 385
M+ GL PN T ++
Sbjct: 294 MKSSGLVPNVFTLSSIL 310
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + L+S + N ++ Y KC ARRVFD D SW ++ Y++N L
Sbjct: 26 IHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNAL 83
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
E L F MR G++ NE V + DA +H ++ + G+S
Sbjct: 84 PREALAAFRAMRARGVRCNEFALPIVLKC--APDAGLGVQVHAVAVST--GLSGDIFVAN 139
Query: 419 GLVGVLGKCGHLFEAQQFIEQ 439
LV + G G + EA++ ++
Sbjct: 140 ALVAMYGGFGFVDEARRVFDE 160
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y KC + A +VF+ + ++ ++ MI + G++ ++LF +M + GL+
Sbjct: 445 NGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLE 504
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
P+ ++ +AC S A E+ +H +K +F T+ + G LV KCG + +
Sbjct: 505 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKF----MTDVFAGNALVYTYAKCGSIED 560
Query: 433 A 433
A
Sbjct: 561 A 561
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 226/408 (55%), Gaps = 33/408 (8%)
Query: 248 PSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P A ++ Q+GK +E I + GV AD + F ++ C N +++H
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++S ++ + +++ Y KCG MTDA + F M +R+ SW+ +I+ YA NG D L
Sbjct: 470 IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTL 529
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
F+QM + G +P+ +FL+V SAC +EEA HF SM + ++P EHY +V V
Sbjct: 530 NSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDV 589
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL-DPSKAD 482
L + G EA++ + + +PFEP+ W ++ N RIH + +L A + + ++ D A
Sbjct: 590 LCRNGRFDEAEKLMTE-MPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAA 648
Query: 483 P---------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYR 516
P K + +K A S ++ K + F +P + +
Sbjct: 649 PYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKK 708
Query: 517 DDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
K+ AL+ +M++ Y PDT LHD+D+ K ++L YHSER AIA+ L++TP +P+
Sbjct: 709 ILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIV 768
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLR C DCH AIK++S+IV RE+IVRD+ RFHHFKDG CSCGDYW
Sbjct: 769 VMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++MY KC +A+++FD++A +S W MI+ Y G +EG+ +F MR+ G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHL 430
+ ++ TF ++ AC + +I +H ++S F + G+ L+ KCG +
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGS----ALLDTYAKCGCM 494
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+A + + +P E + W AL + +G++D
Sbjct: 495 TDAIKSFGE-MP-ERNSVSWNALISAYAQNGNVD 526
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + KEA L G++ D TL G + ++H + ++ +L+
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++ Y K + A ++F HM ++ +++ ++ GY++ GL +E ++LF ++ G
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236
Query: 374 LQPNEQTFLAVFSACGSAD 392
++P++ TF A+ SA D
Sbjct: 237 IKPSDFTFAALLSAAVGLD 255
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H F Q + + LN +I + K G ++ AR +FD M +R+ SW ++I GY +
Sbjct: 63 HQVFDQMPAKNTISLN-MMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQS 121
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACG---SADAIEEAFIHFESMKSEFGISPGTEH 416
E +L+ MR+ G++P+ T + + S G + + I + H + E+ +
Sbjct: 122 KEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCN-- 179
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
LV K L+ A Q + L + T F + Y+ + L + A EL ++L
Sbjct: 180 --SLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYS----NEGLNEEAIELFLEL 232
Query: 477 DPSKADP 483
S P
Sbjct: 233 HNSGIKP 239
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 259 EGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
EG +EAIEL + G+K F L + ++VH + L++ ++ +
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +++ Y K + + ++F M + S++++I YA NG E LF +++
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF 338
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ F + S S+ + IH +++ E+ LV + KC EA
Sbjct: 339 DRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEA 396
Query: 434 QQFIE 438
Q+ +
Sbjct: 397 QKIFD 401
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 233/441 (52%), Gaps = 55/441 (12%)
Query: 234 NNMNQCPAGDQVLPPSVADLARLCQEGK----------------------VKEAIELMDK 271
N+M C D + LA L Q GK VK + +K
Sbjct: 647 NSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 706
Query: 272 GVKADASCFYTLFELCG--NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
G+ A+ + T+ L N E +++H ++ DL + N ++MYGKCG M
Sbjct: 707 GIPAN---YITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 763
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
D ++ +RS SW+++I+ +A +G + + F +M KLG +P+ TF+++ SAC
Sbjct: 764 DVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACN 823
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
++E +++SM EFG+ PG EH + ++ +LG+ G L A+ FI++ +P P
Sbjct: 824 HGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE-MPVPPNDLA 882
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPT 488
W +L RIHG+++L E +++LDPS K++ +
Sbjct: 883 WRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGS 942
Query: 489 PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQM-KESTYVPDTRYVLHD 542
KK+ A S + K ++ F +P R KL L +M KE+ YVPDT + LHD
Sbjct: 943 NNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHD 1002
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+D+E KE L HSERLA+A+GLI+TP + LRI KNLRVCGDCH+ K +S IVGR+++
Sbjct: 1003 MDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIV 1062
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD RFHHF GKCSCGDYW
Sbjct: 1063 LRDPYRFHHFSGGKCSCGDYW 1083
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 257 CQEGKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
C G++ EA++L+ + D S + + +LC + K + +H + + + DL LN
Sbjct: 9 CNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLN 68
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I Y K G + AR VFD M +RS+ SW M++GY+ NG ++ LF MR G++
Sbjct: 69 TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESM 404
N + S CG +E+A F +M
Sbjct: 129 AN-HALVDFHSKCGK---MEDASYLFGTM 153
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWY-ENAKKVHDYFLQST 307
L+ + G +EA+ L + GV+ + +L C + + +VH + +++
Sbjct: 346 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 405
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
I GD+ + ++ YG G + +A+++F+ M D ++ SW ++ GY+D+G E L +++
Sbjct: 406 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 465
Query: 368 QMRKLGLQPNEQTFLAVFSACG 389
+MR+ G+ N+ TF V S+CG
Sbjct: 466 RMRQEGVSGNQNTFATVTSSCG 487
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 33/163 (20%)
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG---------- 359
G + N +I+MY K G + DA+R FD M ++++ SW +I+GYA +G G
Sbjct: 273 GIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFD 332
Query: 360 -----------------------DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
+E + LF QM LG++PN ++ +AC + + +
Sbjct: 333 EMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD 392
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ GI LV G G ++ AQ+ E+
Sbjct: 393 EGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE 435
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N+ +++ + KCG M DA +F M +R + SW+ MI GYA G D+ +F M + GL
Sbjct: 130 NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189
Query: 375 QPNEQTFLAVFSA 387
P+ T +V A
Sbjct: 190 VPDCYTLGSVLRA 202
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV + + F T+ CG + +V + +Q + + N +I M+ S+ +
Sbjct: 470 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 529
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
A VFDHM + + SW+ MI+ YA +GL E L+ F MR L + N T
Sbjct: 530 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 579
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
N KW + +H ++ + ++ + N ++ +Y + G DA VF M +R + SW+
Sbjct: 592 NLKW---GRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNS 648
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M+ Y +G +GL++ ++ ++G +P+ T+ A+
Sbjct: 649 MMACYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGG 686
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 223/417 (53%), Gaps = 38/417 (9%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYEN 295
P D +L S+ LA Q G V+EA+ ++ GV+ F +L +CGN
Sbjct: 232 PVRDHILWNSL--LAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRF 289
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y + ++ +++ +I+MY KCG ++ A +FD M+ + SW MI GYA
Sbjct: 290 GKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYAL 349
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G E L LFE+M +PN TFLAV +AC A +++ + +F+SM + +GI P E
Sbjct: 350 HGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLE 409
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
H+ L LG+ G L EA FI K+ +PTA W L R+H + L + + +++
Sbjct: 410 HFAALADTLGRAGELDEAYNFI-SKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468
Query: 476 LDPSKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF----R 510
L+P + + KK A S ++ KS+L F R
Sbjct: 469 LEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDR 528
Query: 511 NPTLYRDDEKLKALN----QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ Y D + ALN QM +VP+T V DI++E K L HSE+LAI +G+I
Sbjct: 529 SHPWY--DRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGII 586
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
STPA T +R++KNLRVC DCH K +S++ RE++VRD RFHHFKDG CSCGD+W
Sbjct: 587 STPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG+ EA+ + K G + D+ T+ + + +VH + ++ D+
Sbjct: 147 EEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVF 206
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I+MY C + +VFD++ R W+ ++ G A NG +E L +F +M + G
Sbjct: 207 VGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAG 266
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGH 429
++P TF ++ CG+ A + F + I G E + L+ + KCG
Sbjct: 267 VRPVPVTFSSLIPVCGNL-----ASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGE 321
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ A ++ P W A+ +HG
Sbjct: 322 ISIAHCIFDKMS--SPDVVSWTAMIMGYALHG 351
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++++ G + R+VFD M +R + SW+ ++ G A+ G E L +M + G +P+
Sbjct: 110 IVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPD 169
Query: 378 E---QTFLAVFSACG 389
T L +F+ C
Sbjct: 170 SFTLSTVLPIFAECA 184
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 217/386 (56%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +GV+ D +L E ++VH Y L+ + + + N ++++Y KCG
Sbjct: 209 EMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCG 268
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ +A+RVF M++R+ SW +I G A NG G+E L+LF++M GL P+E TF+ V
Sbjct: 269 AIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLY 328
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F +F MK E GI P EHY +V +L + G + +A ++I Q +P +P
Sbjct: 329 ACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYI-QNMPVQPN 387
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W L IHG + L + A +++L+P + +
Sbjct: 388 AVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRS 447
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK S+++ +R+ EF ++ +Y EK+ L +K YVP T
Sbjct: 448 MLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITEL--LKLEGYVPHTA 505
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VL DI++E KEQAL YHSE++AIA+ L++TP TP+R++KNLRVC DCH AIK++++I
Sbjct: 506 NVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIY 565
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+++RD RFHHF+ G CSC DYW
Sbjct: 566 DREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H +++ + + N ++ +Y CG A +VF+ M +R + +W+ MING+A
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
NG +E L LF +M G++P+ T +++ SA A+E +H +K G+S +
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK--VGLSKNS 254
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
L+ + KCG + EAQ+ + E A W +L ++G + A EL
Sbjct: 255 HVTNSLLDLYAKCGAIREAQRVFSEM--SERNAVSWTSLIVGLAVNG---FGEEALELFK 309
Query: 475 DLDPSKADPKKI 486
+++ P +I
Sbjct: 310 EMEGQGLVPSEI 321
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 221/410 (53%), Gaps = 47/410 (11%)
Query: 253 LARLCQEGKVKEAIELMDKGVK-----ADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G E++E+ + VK +A + C + K +HD ++
Sbjct: 180 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 239
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ ++ + +I+MY KCG + AR+ FD M ++++ SW M+ GY +G E L++F
Sbjct: 240 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 299
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M G++PN TF++V +AC A +EE + F++M EF + PG EHY +V +LG+
Sbjct: 300 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 359
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------- 480
G+L EA I + + P W AL R+H ++DL + + + +LDP
Sbjct: 360 GYLKEAFDLI-KGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLL 418
Query: 481 ----ADPKK---------------IPTPPPKKRTAISILDGKSRLVEF--------RNPT 513
AD + + PP S++D K R+ F ++
Sbjct: 419 SNIYADAGRWEDVERMRILMKNSGLVKPP-----GFSLVDIKGRVHVFLVGDREHPQHEK 473
Query: 514 LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 573
+Y EKL +++E YVPD VLHD+ E KE L HSE+LA+A+G+++T T
Sbjct: 474 IYEYLEKLSM--KLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTT 531
Query: 574 LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ IIKNLRVCGDCH AIK +S+IV RE++VRD+KRFHHF+DG CSCGDYW
Sbjct: 532 IHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 44/258 (17%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A+LAR + A M K +K + S F + C + ++ H L
Sbjct: 48 IAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGF 107
Query: 309 RGDLVLNNKVIEMYGKCGSMTDAR-------------------------------RVFDH 337
DL +++ +++MY KCG + DAR RVFD
Sbjct: 108 EPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDG 167
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACG-SADAIE 395
MA+R + SW+ +I YA NG+ E +++F +M K G + N T AV AC S
Sbjct: 168 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 227
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
IH + +K G+ ++ + KCG + A++ ++ E + W A+
Sbjct: 228 GKCIHDQVIK--MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR--EKNVKSWSAMVA 283
Query: 456 YARIHGDIDLEDHAEELM 473
+HG HA+E +
Sbjct: 284 GYGMHG------HAKEAL 295
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 334 VFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA- 391
+F+ D++ + SW+ +I A +G E L+ F MRKL L+PN TF +C +
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 392 ------DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
A ++A I FG P LV + KCG L +A+ ++
Sbjct: 91 DLHSGRQAHQQALI--------FGFEPDLFVSSALVDMYSKCGELRDARTLFDE 136
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 223/400 (55%), Gaps = 39/400 (9%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G V EA+ E+ +K D+ ++ + AK +H +++ + ++
Sbjct: 422 QNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVF 481
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+ + KCG++ AR++FD M +R + +W+ MI+GY NG G E L LF +M+
Sbjct: 482 VCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGS 541
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PNE TFL+V +AC + +EE +FESMK +G+ P +HY +V +LG+ G L +A
Sbjct: 542 VKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
+FI Q +P +P A+ RIH +++L + + + DLDP
Sbjct: 602 WKFI-QDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYAS 660
Query: 482 -----DPKKIPTPPPKKRTAISILDGKSRLVEFRNP--TLY----------RDDEKLKAL 524
++ T KK I G S LVE RN T Y R L+ L
Sbjct: 661 ASMWDKVARVRTAMEKK--GIQKTPGCS-LVELRNEVHTFYSGSTNHPQSKRIYAYLETL 717
Query: 525 -NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
++MK + YVPDT + HD++++ KEQ L HSERLAIA+GL++T T + I KNLRVC
Sbjct: 718 GDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVC 776
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH A K +S + GRE+IVRD +RFHHFK+G CSCGDYW
Sbjct: 777 GDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA ++++D+GV+ C N E + VH + I D+
Sbjct: 321 QNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS 380
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC + A VF ++ +++ +W+ MI GYA NG +E L LF +M+
Sbjct: 381 VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHD 440
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P+ T ++V +A +A +IH ++++ + L+ KCG +
Sbjct: 441 IKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTL--MDKNVFVCTALIDTHAKCGAIQT 498
Query: 433 AQQFIE 438
A++ +
Sbjct: 499 ARKLFD 504
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V+ +++ + G K D+ ++ + K + +H Y ++ + + +++
Sbjct: 228 VQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDT 287
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCGS+ AR VF M+ R++ SW+ MI+GYA NG +E F +M G++P +
Sbjct: 288 YFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSM 347
Query: 382 LAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKC 427
+ AC + +E ++H + K F +S L+ + KC
Sbjct: 348 MGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNS----LISMYSKC 392
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L +L G +++H + + + +L V+ +Y KC + DA ++F+ M
Sbjct: 145 FTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP 204
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
R + SW+ ++ GYA NG +Q+ QM++ G +P+ T ++V A A+
Sbjct: 205 QRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKAL 259
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L ELC + K ++ +++ + + K+I ++ K S+T+A RVF+ + +
Sbjct: 50 LLELCTSLK---ELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMR 370
+H M+ GYA N + ++ +E+MR
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMR 134
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 207/385 (53%), Gaps = 28/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ + G++ + +L +C E K +H Y + I+GD++L ++MY C
Sbjct: 418 VHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANC 477
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A R+F DR + W+ MI+G+A +G G+ L+LFE+M LG+ PN+ TF+
Sbjct: 478 GDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGAL 537
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC + ++E F M EFG +P EHY +V +LG+ G L EA + I + +P P
Sbjct: 538 HACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELI-KSMPMRP 596
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PK 484
+ + ++H +I L + A + + L+P K+ +
Sbjct: 597 NIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRR 656
Query: 485 KIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK--LKALNQMKE----STYVPDTRY 538
+ K +S ++ L EF D K + +++M+E + Y PD
Sbjct: 657 AMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSC 716
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLH+ID+E K AL YHSE+LA+AYGLIST P+RI+KNLRVC DCHNA K++S+I G
Sbjct: 717 VLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYG 776
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFK+G CSC DYW
Sbjct: 777 REIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 8/226 (3%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V+ ++++ +G+ + +L + CG E K +H + L++ LVL I+M
Sbjct: 313 VRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDM 372
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
YGKCG + AR VFD + + W MI+ YA N DE +F M G++PNE+T
Sbjct: 373 YGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTM 432
Query: 382 LAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
+++ C A ++E +IH S + GI V + CG + A + +
Sbjct: 433 VSLLMICAKAGSLEMGKWIH--SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEA 490
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ W A+ + +HG + A EL +++ P I
Sbjct: 491 T--DRDISMWNAMISGFAMHGH---GEAALELFEEMEALGVTPNDI 531
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 296 AKKVHDYFLQSTIRGD--LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
K +H Y +++ G + L +I+MY KC ++ ARRVFD ++ S+ SW MI Y
Sbjct: 244 GKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAY 303
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP 412
+EG++LF +M G+ PNE T L++ CG+A A+E +H ++++ F +S
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ + GKCG + A+ +
Sbjct: 364 VLA--TAFIDMYGKCGDVRSARSVFDS 388
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++VH + +++ GD+ + N +I MY + GS+ AR +FD + ++ + SW MI Y
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDR 202
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
+GL DE L L M + ++P+E +++
Sbjct: 203 SGLLDEALDLLRDMHVMRVKPSEIGMISI 231
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 218/385 (56%), Gaps = 28/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ D V DA ++ CG+ +++H+Y ++ ++ +L+L N +I+MY KC
Sbjct: 1284 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKC 1343
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR VFD M R + SW MI+ Y NG G + + LF +M+ LGL P+ F++V
Sbjct: 1344 GCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVL 1403
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A ++E +F+ M E I P EH++ +V +LG+ G + EA FI+Q +P EP
Sbjct: 1404 SACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQ-MPMEP 1462
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI-- 486
W AL + R++ ++ + A + + L P ++ D +
Sbjct: 1463 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 1522
Query: 487 --PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
T KK +S + +R+ F +P + E+L L +MKE+ YVP+T
Sbjct: 1523 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDS 1582
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
LHD+++E KE L HSE+LAIA+ +++T +P+RI KNLRVCGDCH A K++S+IVG
Sbjct: 1583 ALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVG 1642
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+ +RD RFHHF +G CSCGDYW
Sbjct: 1643 REITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H ++ + ++ + N +I MYGKCG + +A RV D M R + SW+ ++ G A NG
Sbjct: 1147 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNG 1206
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
D+ L++ ++M LGL+P+ T ++ A + +F+ MK
Sbjct: 1207 QFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMK 1254
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L K++ Y CG R +FD + +++ +++MI Y +N L + L +F+ M G
Sbjct: 1062 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 1121
Query: 374 LQPNEQTFLAVFSA-CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P+ T+ V A GS D IH ++ ++ + GL+ + GKCG L E
Sbjct: 1122 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGN--GLISMYGKCGCLVE 1179
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDID--LEDHAEELMVDLDP 478
A + ++Z +P W +L +G D LE E ++ L P
Sbjct: 1180 ACRVLDZ-MPCRDVVS-WNSLVAGCARNGQFDDALEVCKEMELLGLKP 1225
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 209/380 (55%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D F TL + E +++H ++ D + +++MY KCG++ DA
Sbjct: 1204 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 1263
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
R+F M R++ W+ M+ G A +G +E + LF+ M+ G++P+ +F+ + SAC A
Sbjct: 1264 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 1323
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
EA+ + SM +++GI P EHY LV LG+ G + EA + IE +PF+ +A A
Sbjct: 1324 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIET-MPFKASASINRA 1382
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L RI GD++ + L+P + K +
Sbjct: 1383 LLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNV 1442
Query: 492 KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
KK S +D K+ L F + +Y E++ + ++E YVPDT +VL D+
Sbjct: 1443 KKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEM--MKTIREDGYVPDTEFVLLDV 1500
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ E KE++L YHSE+LAIAYGLISTPA T +R+IKNLRVCGDCHNAIK +S++ RE+++
Sbjct: 1501 EDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVL 1560
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF+DG CSCGDYW
Sbjct: 1561 RDANRFHHFRDGVCSCGDYW 1580
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 263 KEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
K+A+EL G K+D T + CG + K++H + +++ DL +N+ +
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 1148
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG M +A VF++++ +W MI+G DNG D+ L+++ +MR+ + P+E
Sbjct: 1149 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 1208
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQ 435
TF + A A+E+ +H +K + P ++G LV + KCG++ +A +
Sbjct: 1209 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDP----FVGTSLVDMYAKCGNIEDAYR 1264
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGD 462
+K+ A W A+ HG+
Sbjct: 1265 LF-KKMNVRNIA-LWNAMLVGLAQHGN 1289
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ +LC N A+ VH Y ++ + D+ ++ ++ +Y KCG M DAR +FD M +R
Sbjct: 733 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 792
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ W++M+ GY GL E QLF + + GL+P+E
Sbjct: 793 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDE 828
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G ++ + + + DA + E K+VH ++S + D+ + N ++
Sbjct: 887 GAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLV 946
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MY K G AR VF+ M + SW+ MI+ A + L +E + LF + GL+P+
Sbjct: 947 NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 1006
Query: 380 TFLAVFSACGS-ADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T +V AC S D + + IH ++K+ G + L+ V K G + EA+
Sbjct: 1007 TLASVLRACSSLIDGLNISRQIHVHALKT--GNIADSFVATTLIDVYSKSGKMEEAEFLF 1064
Query: 438 EQK 440
+ K
Sbjct: 1065 QNK 1067
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA- 354
K H + S GD L+N ++ MY KCGS++ AR+VFD +R + +W+ ++ YA
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 355 ----DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFG 409
++G EGL LF +R T V C ++ + A +H ++K G
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK--IG 757
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ LV + KCG + +A+ +
Sbjct: 758 LEWDVFVSGALVNIYSKCGRMRDARLLFD 786
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYEN-AKKVHDYFLQSTIRGDLVLNN 316
+E V I+L+ +G+K D ++ C + N ++++H + L++ D +
Sbjct: 986 EEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVAT 1045
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I++Y K G M +A +F + D + W+ M+ GY G + L+LF + K G +
Sbjct: 1046 TLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKS 1105
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++ T ACG +++ IH ++K+ F G++ + KCG + A
Sbjct: 1106 DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNS--GILDMYIKCGDMVNA 1161
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 225/402 (55%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ EA+ L + V A A F ++ C + K++H Y L+
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + + +++MY KCG++ AR++FD M SW +I G+A +G G E + LFE+
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ G++PN+ F+AV +AC ++EA+ +F SM +G++ EHY + +LG+ G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--------------LMV 474
L EA FI K+ EPT W L + +H +++L + E LM
Sbjct: 495 KLEEAYNFI-SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 475 DLDPSKADPKKIPT-------PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
++ S K++ +K+ A S ++ K++ F +P++ + +E LK
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLK 613
Query: 523 A-LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
A + QM++ YV DT VLHD+D+E K + L HSERLA+A+G+I+T T +R+ KN+R
Sbjct: 614 AVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+C DCH AIK +S+I RE+IVRDN RFHHF G CSCGDYW
Sbjct: 674 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y ++ I D+ + + +++MY K + D+ RVF + R SW+ ++ GY
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
NG +E L+LF QM ++P F +V AC + +H ++ FG +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG++ A++ ++ + + W A+ +HG
Sbjct: 381 AS--ALVDMYSKCGNIKAARKIFDRMNVLDEVS--WTAIIMGHALHG 423
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/354 (38%), Positives = 206/354 (58%), Gaps = 28/354 (7%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H ++S +L +NN +I MY KCG+ A +VF+ M R++ +W +I+G+A +
Sbjct: 468 EQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKH 527
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G + L+LF +M ++G++PNE T++AV SAC I+EA+ HF SM ISP EH
Sbjct: 528 GFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEH 587
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y +V +LG+ G L EA +FI +PF+ A W R+H + L +HA + +++
Sbjct: 588 YACMVDLLGRSGLLLEAIEFINS-MPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILER 646
Query: 477 DP---------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFR----- 510
+P A K + K T S ++ +++ +F
Sbjct: 647 EPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTS 706
Query: 511 NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
+P + ++L L ++K Y+P+T +VLHD++ E KEQ L HSE++A+AY LISTP
Sbjct: 707 HPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTP 766
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R+ KNLRVCGDCH AIK +S + GRE++VRD RFHH KDGKCSC DYW
Sbjct: 767 KPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 253 LARLCQEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G + +A++L + + + D +L C +++ K++H + ++S +
Sbjct: 220 ITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGL 279
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + +++MY K ++ ++R++F+ M ++ SW +I+GY + E ++LF
Sbjct: 280 ASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCN 339
Query: 369 MRKLGLQPNEQTFLAVFSACGS 390
M + PN TF +V AC S
Sbjct: 340 MLHGHVTPNCFTFSSVLKACAS 361
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCG-SMTDARRVFD 336
CF L C NP ++ + + L++ + + +I+M+ K G + AR VFD
Sbjct: 147 CFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFD 206
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
M +++ +W LMI Y+ GL D+ + LF ++ P++ T ++ SAC
Sbjct: 207 KMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSAC 258
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
LP S+ A+ + +++AI +D + L + C E K +H +
Sbjct: 8 LPSSIYLQAKDLKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLID 67
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGL 363
S + D VL N +I +Y KCG +A +F +M R + SW +I+ +A+N + L
Sbjct: 68 SGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRAL 127
Query: 364 QLFEQMRKLG---LQPNEQTFLAVFSAC 388
F M + + PNE F A+ +C
Sbjct: 128 LTFLHMLQCSRNIIYPNEYCFTALLRSC 155
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 220/405 (54%), Gaps = 37/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDKGVK-----ADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G E++E+ + VK +A + C + K +HD ++
Sbjct: 334 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 393
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ ++ + +I+MY KCG + AR+ FD M ++++ SW M+ GY +G E L++F
Sbjct: 394 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 453
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M G++PN TF++V +AC A +EE + F++M EF + PG EHY +V +LG+
Sbjct: 454 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 513
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------- 480
G+L EA I + + P W AL R+H ++DL + + + +LDP
Sbjct: 514 GYLKEAFDLI-KGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLL 572
Query: 481 ----ADPKK----------IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDD 518
AD + + K S++D K R+ F ++ +Y
Sbjct: 573 SNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYL 632
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
EKL +++E YVPD VLHD+ E KE L HSE+LA+A+G+++T T + IIK
Sbjct: 633 EKLSM--KLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIK 690
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH AIK +S+IV RE++VRD+KRFHHF+DG CSCGDYW
Sbjct: 691 NLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
L +E V+E+ D V D ++ C + VH + ++ GDL +
Sbjct: 240 LFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVE 299
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-L 374
N +++ Y KCG + +RRVFD MA+R + SW+ +I YA NG+ E +++F +M K G +
Sbjct: 300 NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 359
Query: 375 QPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
N T AV AC S IH + +K G+ ++ + KCG + A
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK--MGLESNVFVGTSIIDMYCKCGKVEMA 417
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
++ ++ E + W A+ +HG HA+E +
Sbjct: 418 RKAFDRMR--EKNVKSWSAMVAGYGMHG------HAKEAL 449
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A+LAR + A M K +K + S F + C + ++ H L
Sbjct: 124 IAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGF 183
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL +++ +++MY KCG + DAR +FD ++ R++ SW MI GY N L LF++
Sbjct: 184 EPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKE 243
Query: 369 --MRKLGLQPNEQT------FLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ + G + + + ++V SAC S +I E +H +K F G E+
Sbjct: 244 FLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG-VHGFLIKRGFEGDLGVEN-- 300
Query: 419 GLVGVLGKCGHL 430
L+ KCG L
Sbjct: 301 TLMDAYAKCGEL 312
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 334 VFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA- 391
+F+ D++ + SW+ +I A +G E L+ F MRKL L+PN TF +C +
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 392 ------DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
A ++A I FG P LV + KCG L +A+ ++
Sbjct: 167 DLHSGRQAHQQALI--------FGFEPDLFVSSALVDMYSKCGELRDARTLFDE 212
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 227/415 (54%), Gaps = 34/415 (8%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKW-YEN 295
G Q + A ++ Q G+ A+ L ++GV+ + F ++ C P E
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQ 416
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K+ H ++S L +++ ++ MY K G++ A VF DR + SW+ MI+GYA
Sbjct: 417 GKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQ 476
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G + L++FE+MR L+ + TF+ V SAC A + E +F+ M ++ I P E
Sbjct: 477 HGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTME 536
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V + + G L +A I K+PF A W L R+H ++ L + A E ++
Sbjct: 537 HYSCMVDLYSRAGMLEKAMDLI-NKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLIS 595
Query: 476 LDP--------------------SKADPKKI-PTPPPKKRTAISILDGKSRLVEF----- 509
L P +A +K+ KK S ++ K++ F
Sbjct: 596 LQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDL 655
Query: 510 RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P R KL+ L+ ++K++ Y PDT+YVLHD+++E KE L HSERLAIA+GLI+T
Sbjct: 656 SHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIAT 715
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P TP++I+KNLRVCGDCH IK++S+I GR+++VRD+ RFHHFK G CSCGDYW
Sbjct: 716 PPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A G EA EL + GVK + F T+ +LC N K AK++H +++
Sbjct: 266 IAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGS 325
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFE 367
DL + ++ Y KC + DA ++F M +++ SW +I+GY NG D + LF
Sbjct: 326 DFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFC 385
Query: 368 QMRK-LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
QMR+ G++PNE TF +V +AC + A E F S + G S LV + K
Sbjct: 386 QMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK 445
Query: 427 CGHLFEAQQFIEQKL 441
G++ A + ++++
Sbjct: 446 RGNIESANEVFKRQV 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ L G D S + ++CG K+VH ++ D+ + +
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY K S+ D RVFD M +++ SW ++ GY NGL ++ L+LF QM+ G++PN
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKS 406
TF AV + A+E+ +H +KS
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA Q G ++A++L +G+K + F + E +VH ++S +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N ++ MY K ++DA+ VFD M +R+ SW+ MI G+ NGL E +LF +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMK--SEFGISPGTEHYLGLVGV 423
MR G++ + F V C A+ E +F +H + +K S+F ++ T L+
Sbjct: 285 MRLEGVKLTQTIFATVIKLC--ANIKEMSFAKQLHCQVIKNGSDFDLNIKT----ALMVA 338
Query: 424 LGKCGHLFEA 433
KC + +A
Sbjct: 339 YSKCSEIDDA 348
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 212/398 (53%), Gaps = 38/398 (9%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +EAI+L K GV D ++ C + +++H ++S + L ++
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY KCGS+ DA R FD+M R + SW +I GYA NG G LQ ++QM G +
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF+ + AC + +FE+M +GI PG EHY ++ +LG+ G L EA+
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------ 483
+ Q + P A W+AL R+H +++L + A + + +L+P + P
Sbjct: 301 LLNQ-MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAG 359
Query: 484 ---------KKIPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKALN 525
+ + + K S ++ S++ F RN + DE + +
Sbjct: 360 KWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLI- 418
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
KE+ YVPD + LHD D E KE L YHSE+LA+A+GL++ P P+RI KNLRVCGD
Sbjct: 419 --KEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGD 476
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH A+K S++ R +I+RD+ FHHF +G+CSCGDYW
Sbjct: 477 CHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
K +NA VH +++ ++NN +I+MY K G + A VF M D+ + SW ++
Sbjct: 55 KVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLV 114
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFG 409
GY+ NG +E ++LF +MR G+ P++ +V SAC ++ IH +KS
Sbjct: 115 TGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLE 174
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF--WEAL 453
S ++ LV + KCG + +A + + PT + W AL
Sbjct: 175 SSLSVDN--SLVTMYAKCGSIVDANRAFDNM----PTRDVISWTAL 214
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 220/375 (58%), Gaps = 29/375 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + + +LF C + + E K VH Y ++S + N +++MY K GS
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR++FD +A R + SW+ ++ YA +G G E + FE+MR++G++PNE +FL+V +A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + ++E + ++E MK + GI P HY+ +V +LG+ G L A +FIE+ +P EPTA
Sbjct: 373 CSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE-MPIEPTA 430
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKI 486
W+AL N R+H + +L +A E + +LDP P KK+
Sbjct: 431 AIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKM 490
Query: 487 PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVL 540
KK A S ++ ++ + F R+P K + L ++KE YVPDT +V+
Sbjct: 491 KESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVI 550
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
+DQ+ +E L YHSE++A+A+ L++TP + + I KN+RVCGDCH AIK+ S++VGRE
Sbjct: 551 VHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGRE 610
Query: 601 LIVRDNKRFHHFKDG 615
+IVRD RFHHFKD
Sbjct: 611 IIVRDTNRFHHFKDA 625
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+ AD + TL + C K + VH + LQS R D+V+ N ++ MY KCGS+ +AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+VF+ M R +W +I+GY+ + + L F QM + G PNE T +V A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + ++ ++ + + ++++Y + G M DA+ VFD + R+ SW+ +I G+A
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS 406
++ L+LF+ M + G +P+ ++ ++F AC S +E+ ++H +KS
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 221/387 (57%), Gaps = 33/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ +G + + ++F C + E K VH + ++S + + N +I+MY K
Sbjct: 296 LQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 355
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GS+ DA++VF + + + SW+ +I+GYA +GLG E LQLFEQM K +QPNE TFL+V
Sbjct: 356 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVL 415
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+AC + ++E +FE MK I H++ +V +LG+ G L EA +FIE+ +P +P
Sbjct: 416 TACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAGRLNEANKFIEE-MPIKP 473
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------K 484
TA W AL R+H ++DL +A E + +LDP + P K
Sbjct: 474 TAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRK 533
Query: 485 KIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
+ KK A S ++ ++ + F + R EK+ ++KE YVPDT
Sbjct: 534 MMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISG--KIKEIGYVPDT 591
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
+VL ++Q+ +E L YHSE+LA+A+ ++ TP +RI KN+R+CGDCH+A K SR+
Sbjct: 592 SHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRV 651
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
+GRE+IVRD RFHHF G CSC DYW
Sbjct: 652 LGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + + +H + ST DLVL N ++ MY KCGS+ +A+ +FD M + M SW
Sbjct: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
++I+GY+ +G E L LF +M LG QPNE T ++ A G+
Sbjct: 175 TVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 123/236 (52%), Gaps = 16/236 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EA+ L K G + + +L + G + +++H + L+ ++
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY + M +A+ +F+ +A +++ SW+ +I G+A G G+ ++LF QM + G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQG 302
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
+P T+ +VF+AC S+ ++E+ ++H +KS G P Y+G L+ + K G +
Sbjct: 303 FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKS--GGQPIA--YIGNTLIDMYAKSGSI 358
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+A++ + ++L + + + YA+ HG L A +L + +K P +I
Sbjct: 359 KDAKK-VFRRLVKQDIVSWNSIISGYAQ-HG---LGAEALQLFEQMLKAKVQPNEI 409
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 219/394 (55%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K I++ + G+ D F + GN + +++H ++ + + N
Sbjct: 544 EEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNAT 603
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MYGKCG + D R+ RS SW+++I+ A +G + + F +M LGL+P+
Sbjct: 604 MDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDH 663
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+++ SAC ++E +F SM ++FG+ G EH + ++ +LG+ G L EA+ FI
Sbjct: 664 VTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFI- 722
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
K+P PT W +L +IHG+++L A + + +LD S
Sbjct: 723 NKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWR 782
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
K++ + KK+ A S + K+++ F +N +Y E+LK + ++E
Sbjct: 783 DVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKI--IRE 840
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ Y+PDT Y L D D+E KE L HSER+A+A+GLI++ +PLRI KNLRVCGDCH+
Sbjct: 841 AGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSV 900
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I+GR++I+RD RFHHF GKCSC DYW
Sbjct: 901 FKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE++ + F T C N E K VH + + + +L++ N ++ MYGK
Sbjct: 351 IEMLQTRKATNYVTFTTALSACYN---LETLKIVHAFVILLGLHHNLIIGNALVTMYGKF 407
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GSM A+RV M DR +W+ +I G+ADN + ++ F +R+ G+ N T + +
Sbjct: 408 GSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLL 467
Query: 386 SACGSADAIEEAF--IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
SA S D + + IH + + F + + L+ + +CG L
Sbjct: 468 SAFLSPDDLLDHGMPIHAHIVVAGFELETFVQS--SLITMYAQCGDL 512
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K D L +CG+ + + +H ++S + ++ + N ++ MY + G DA
Sbjct: 258 KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEF 317
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF M +R + SW+ M+ + DNG L+L +M + N TF SAC + +
Sbjct: 318 VFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLET 377
Query: 394 IEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQ 435
++ +H F I G H L LV + GK G + AQ+
Sbjct: 378 LK--IVH------AFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G VKE + + + GV + + T+ CG +V ++S + + +
Sbjct: 139 GCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVA 198
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I M+G C S+ +A VFD M +R SW+ +I NG ++ L+ F QMR +
Sbjct: 199 NSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAK 258
Query: 376 PNEQTFLAVFSACGSA 391
+ T A+ CGSA
Sbjct: 259 TDYITISALLPVCGSA 274
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWY-ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GV+ + +L C E A +VH + ++ + D+ + ++ YG G
Sbjct: 49 MLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFG 108
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ + VF + + ++ SW ++ GYA NG E + ++ ++R+ G+ NE V
Sbjct: 109 WVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIR 168
Query: 387 ACGSADAIEEAFIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEA 433
+CG + + + ++ + S G+ L+ + G C + EA
Sbjct: 169 SCG---VLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEA 214
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + + + + +I MY +CG + + +FD +A+++ +W+ +++ A G
Sbjct: 483 IHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGP 542
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
G+E L+L +MR G+ ++ +F + G+ ++E S+ + G
Sbjct: 543 GEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEG-QQLHSLIIKHGFESNDYVLN 601
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
+ + GKCG + + + + Q P + W L + HG A M+DL
Sbjct: 602 ATMDMYGKCGEIDDVFRILPQ--PRSRSQRSWNILISALARHGFFQQAREAFHEMLDL 657
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K GS+ A+ VFD M +R+ SW+ +++G+ G + +Q F M + G++P+
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 381 FLAVFSACGSADAIEE-AF-IHFESMKSEFG--ISPGTE--HYLGLVGVLGKCGHLFEAQ 434
++ +AC + + E AF +H +K + GT H+ G G + + +F+
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 435 QFIEQKLPFEPTAEFWEAL 453
+ EP W +L
Sbjct: 121 E--------EPNIVSWTSL 131
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 209/371 (56%), Gaps = 30/371 (8%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E + VH +++ + ++ + + +++MYGKCGS+ +A +VF + +R
Sbjct: 315 SVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPER 374
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMR--KLGLQPNEQTFLAVFSACGSADAIEEAFI 399
++ +W+ MI GYA G D L+LFE+M G++P+ T +++ S C A+E
Sbjct: 375 NLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQ 434
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
FESM+ +GI PG EH+ +V +LG+ G + A +FI Q + +PT W AL R+
Sbjct: 435 IFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFI-QNMAIQPTISVWGALLGACRM 493
Query: 460 HGDIDLEDHAEELMVDLD---------------------PSKADPKKIPTPPPKKRTAIS 498
HG +L A E + +LD + K++ KK S
Sbjct: 494 HGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYS 553
Query: 499 ILDGKSRLVEF--RNPTLYRDDEKLKALNQ----MKESTYVPDTRYVLHDIDQEAKEQAL 552
+ K+R+ F ++ + R+ E L + MKE+ YVPDT L D++ E K +
Sbjct: 554 WIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEV 613
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
YHSE++A+A+GLI+ P P+RI KNLR+CGDCH+AIK +SRIVGRE+IVRDN RFH F
Sbjct: 614 WYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRF 673
Query: 613 KDGKCSCGDYW 623
KDG CSC DYW
Sbjct: 674 KDGCCSCKDYW 684
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 20/231 (8%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F C + +++H + ++ + D+ + N +I+ YGKCG + A VF+ +
Sbjct: 212 FCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIG 271
Query: 340 DR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA- 397
+R ++ SW M+ N + +F Q RK ++P + +V SAC +E
Sbjct: 272 NRKNVVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGR 330
Query: 398 FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
+H ++K+ E I G+ LV + GKCG + A+Q + LP E W A+
Sbjct: 331 SVHALAVKACVEDNIFVGS----ALVDMYGKCGSIENAEQVFSE-LP-ERNLVTWNAMIG 384
Query: 456 YARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
GDID+ A L ++ + P T ISIL SR+
Sbjct: 385 GYAHQGDIDM---ALRLFEEMTLGSHGIR------PSYVTLISILSVCSRV 426
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K++H L+ + D+ + +MY K G DA +FD M R++ +W N Y
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATW----NAYI 181
Query: 355 DNGLGD----EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-------EAFIHFES 403
N + D + + F++ + +PN TF A +AC D + AFI
Sbjct: 182 SNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNAC--VDMVRLNLGRQLHAFIVRCG 239
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
K + ++ GL+ GKCG + A+
Sbjct: 240 YKEDVSVAN------GLIDFYGKCGDIVSAEM 265
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 294 ENAKKVHDYFLQSTIRGDLV----------LNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
E+A H L TI ++ L+N ++ MY K + A+ V R++
Sbjct: 14 ESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTV 73
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+W +I+G N L F MR+ +QPN+ TF VF A
Sbjct: 74 VTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKA 117
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 220/408 (53%), Gaps = 38/408 (9%)
Query: 251 ADLARLCQEGKVKEAIEL------MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
A LA Q G + A+EL KG+ + F TL + C +K+H
Sbjct: 81 AMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVA 140
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ DLV+ N ++ YG+CGS+ DA+ VFD M R + SW MI+ +A G DE ++
Sbjct: 141 ERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAME 200
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
L+ +M G P++ F++V AC ++ +E + F S+ + + P EHY +V VL
Sbjct: 201 LYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVL 260
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP- 483
G+ G L +A+ + + +PF P + + + +++ D++ + A E++ +LDP + P
Sbjct: 261 GRAGKLRDAEDLL-RLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPY 319
Query: 484 --------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLY 515
K + KK+ S ++ R+ EF + +Y
Sbjct: 320 ITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIY 379
Query: 516 RDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
+ ++L QMKE+ Y DT+ VL D++++ KE L YHSE+LAIA+GLISTP PLR
Sbjct: 380 AEIQRLG--RQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLR 437
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
I+KNLRVC DCH A K++S++ GRE++VRD RFHHF DG CSC DYW
Sbjct: 438 IVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV+ + + T+ P E ++VH + + D+++ ++ MYGKC S+ +
Sbjct: 4 RGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEE 63
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSAC 388
AR F+ ++ ++ SW M+ YA NG L+L+ +M + G+ PN TF+ + AC
Sbjct: 64 ARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDAC 123
Query: 389 GSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
A+ E IH + +E G LV G+CG L +A+
Sbjct: 124 SFLGALAEGRKIH--AAVAERGFDTDLVVCNALVNFYGRCGSLGDAK 168
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 223/400 (55%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+EL +++ ++ + +C + E K++H ++S
Sbjct: 406 QNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSS 465
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N ++ MY + GS+ ARRVFD + R +W MI A +GLG++ + LFE+M ++
Sbjct: 466 VSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRV 525
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF+ V SAC ++E +F+ ++ + GI P HY +V +L + G E
Sbjct: 526 GVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSE 585
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
AQ+FI+Q +P EP A W +L + R+H + DL + A E ++ +DP +
Sbjct: 586 AQEFIQQ-MPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYS 644
Query: 482 ------DPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D KI KK T S +R+ F + T+YR K+
Sbjct: 645 ACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKM-- 702
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+ +K++ +VPD + VLHD+D E KE+ L HSE+LAIA+GL+STP +T LRI+KNLRVC
Sbjct: 703 WDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVC 762
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH AIK +S++ RE+I+RD RFHHFKDG CSC DYW
Sbjct: 763 NDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 294 ENAKKVHDYFLQSTIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN 351
ENA+ V +Q + DL + ++E Y K G M AR +FD M++R + +W MI
Sbjct: 347 ENARGV----MQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIV 402
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
GY NG DE ++LF M + G +PN T AV S C S +E IH ++++S
Sbjct: 403 GYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ +Y K G + DAR VF M +R SW +M+ G G E +++F M GL
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P + T V S+C + +A S + G+S ++ + GKCG E +
Sbjct: 160 PTQFTLTNVLSSCAATEA-RGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA-ETAR 217
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
+ +++P E + W A+ + G +DL
Sbjct: 218 AVFERMP-ERSVSSWNAMVSLDAHLGRMDL 246
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 51/263 (19%)
Query: 250 VADLARLCQEGK-VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
V L R+ + G+ +K ++++ G+ + C + +KVH + ++ +
Sbjct: 134 VVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL 193
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN----------------- 351
+ + N V+ MYGKCG AR VF+ M +RS+ SW+ M++
Sbjct: 194 SSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFEN 253
Query: 352 --------------GYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEE 396
GY NGL + L F +M + P+E T +V SAC + +
Sbjct: 254 MPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSI 313
Query: 397 AF-IHFESMKSEFGISPGTEHYLG-----LVGVLGKCGHLFEAQQFIEQKLPFEP-TAEF 449
+H ++S P Y+G L+ + K G + A+ ++Q + + F
Sbjct: 314 GKQVHAYILRSRM---P----YIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISF 366
Query: 450 WEALRNYARIHGDIDLEDHAEEL 472
L Y ++ GD+ HA E+
Sbjct: 367 TALLEGYVKL-GDM---KHAREM 385
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 221/438 (50%), Gaps = 40/438 (9%)
Query: 225 IPNQLNNVPNNMNQCPAGDQV--------LPPSVADLARLCQEGKVKEAIELMDKGVKAD 276
+ L V + +N+ + ++ LP A ++ Q G ++AI L + K++
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 277 AS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
S + C K VHD + + ++ +I MY KCGS+ +AR
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
R+FD M ++ +W+ MI+GY +G G E L +F +M G+ P TFL V AC A
Sbjct: 476 RLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG 535
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E F SM +G P +HY +V +LG+ GHL A QFIE + EP + WE
Sbjct: 536 LVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEA-MSIEPGSSVWET 594
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS------------KAD---PKKIPTPPPKKRTAI 497
L RIH D +L E + +LDP AD P+ K+ +
Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKL 654
Query: 498 SILDGKSRLVEFRNPTLYRDD-----------EKLKAL-NQMKESTYVPDTRYVLHDIDQ 545
+ G + + P ++ EKL+ L +M+E+ Y P+T LHD+++
Sbjct: 655 AKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEE 714
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
E +E + HSERLAIA+GLI+T T +RIIKNLRVC DCH K++S+I R ++VRD
Sbjct: 715 EERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRD 774
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHFKDG CSCGDYW
Sbjct: 775 ANRFHHFKDGVCSCGDYW 792
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
ELM G + +S +L + G+ +H Y L+S ++ + +Y K
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLML---IYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ AR++FD ++S+ SW+ MI+GY NGL ++ + LF +M+K PN T + S
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 387 ACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC A+ ++H S E I T L+G+ KCG + EA++ +
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVST----ALIGMYAKCGSIAEARRLFD 479
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF-EQM 369
+L+L + +++MY K + DAR+VFD M ++ W+ MI+GY N + E +Q+F + +
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ + + T L + A + + S+ ++ G G + + KCG
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLG-MQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 430 L 430
+
Sbjct: 272 I 272
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D VL I +Y KCG + +F + +++ MI+GY NG + L LF+++
Sbjct: 256 DYVLTG-FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
G + T +++ G I IH +KS F
Sbjct: 315 LSGARLRSSTLVSLVPVSGHLMLIYA--IHGYCLKSNF 350
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 232/440 (52%), Gaps = 34/440 (7%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK--- 271
S+ + G+ L+ P D V A LA Q G +E ++L +
Sbjct: 388 SWNTMLTGYAQAGMLDEARAIFGMMPQKDAV--SWAAMLAAYSQIGFSEETLQLFKEMGR 445
Query: 272 -GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
G + S F + C + E ++H +++ + N ++ MY KCGSM +
Sbjct: 446 CGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEE 505
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A F+ M +R + SW+ MI GYA +G G E L++F+ MRK +P++ T + V +AC
Sbjct: 506 AHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSH 565
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ +E+ +F SM +FG++ EHY ++ +LG+ G L EA + + +PFEP + W
Sbjct: 566 SGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLM-KDMPFEPDSTMW 624
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIP----TP 489
AL +RIH + +L +A E + +L+P A D K+
Sbjct: 625 GALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHER 684
Query: 490 PPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKALNQ-----MKESTYVPDTRYVLHDI 543
KK S ++ ++++ F +++ + E + A + MK++ YV T VLHD+
Sbjct: 685 GVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDV 744
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E KE L YHSE+LA+AYG++ P P+R+IKNLRVC DCH A K +S I GR +I+
Sbjct: 745 EEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIIL 804
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD+ RFHHF+DG CSCGDYW
Sbjct: 805 RDSNRFHHFRDGSCSCGDYW 824
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q G ++EA + D +A + + + E AK++ D + N
Sbjct: 336 QNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVAS----WNT 391
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ Y + G + +AR +F M + SW M+ Y+ G +E LQLF++M + G N
Sbjct: 392 MLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVN 451
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQ 434
F V S C A+E +H +K+ +G+ ++G L+ + KCG + EA
Sbjct: 452 RSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGC----FVGNALLAMYFKCGSMEEAH 507
Query: 435 QFIEQ 439
E+
Sbjct: 508 SAFEE 512
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA + G+++EA EL D + DA + L E A+K+ + Q D+
Sbjct: 238 LAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR----DV 293
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N ++ Y + G M +ARR+FD R + +W +++GYA NG+ +E ++F+ M
Sbjct: 294 VSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMP-- 351
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
N ++ A+ +A +EEA F++M
Sbjct: 352 --DKNAVSWNAMMAAYVQRRMMEEAKELFDAM 381
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ N+ I + + G + DA R+F M RS +++ M+ GYA NG + L F +
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+ P+ ++ + A G + ++ + F+ M
Sbjct: 166 R----PDSFSYNTLLHALGVSSSLADVRALFDEM 195
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 227/385 (58%), Gaps = 31/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M KG + D F T+ C E +VH +++ + D+V+ + +++MY KCG
Sbjct: 685 MMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGR 744
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A R F+ M R++ SW+ MI+GYA +G G + L LF QM+ G P+ TF+ V SA
Sbjct: 745 IDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A + E F HF+SM +G++P EH+ +V +LG+ G L + + F+ Q +P +P
Sbjct: 805 CSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQ-MPVKPNV 863
Query: 448 EFWE-ALRNYARIHG-DIDLEDHAEELMVDLDPSKA-----------------DPKKIPT 488
W L R +G + L A E++++++P+ A D K
Sbjct: 864 LIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRV 923
Query: 489 PPPK---KRTA----ISILDGKSRLV--EFRNPTLYRDDEKLKALN-QMKESTYVPDTRY 538
K K+ A +++ DG V + +P EKLK LN +M+ + Y+P+TR+
Sbjct: 924 AMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRF 983
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
L+D++ E+KE+ L YHSE++A+A+ +++ P++ P+RI+KNLRVCGDCH+A K +S+IV
Sbjct: 984 ALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVE 1042
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++++RD+ RFHHF++GKCSCGD+W
Sbjct: 1043 RQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 23/248 (9%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V+ + +M G + F T+ + +E K++H L+ + D + N ++
Sbjct: 577 VESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLAC 636
Query: 322 YGKCGSMTDARRVFDHMADRSMD-SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
YGKCG M +F M+DR + SW+ MI+GY N L + + + M + G + + T
Sbjct: 637 YGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFT 696
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
F V SAC + +E +H S+++ E I G+ LV + KCG + A +F
Sbjct: 697 FATVLSACATVATLERGMEVHGCSVRACLESDIVIGS----ALVDMYAKCGRIDYASRFF 752
Query: 438 EQKLPFEPTAEFWEALRNYAR-IHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA 496
E +P + + YAR HG L+ A+ K+ P P T
Sbjct: 753 EM-MPARNLYSWNSMISGYARHGHGTKSLDLFAQ-------------MKLQGPLPDHVTF 798
Query: 497 ISILDGKS 504
+ +L S
Sbjct: 799 VGVLSACS 806
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 256 LCQEGKVKEAIEL---MDKGVKADASCFYTLFELCGNPKWY--ENAKK----VHDYFLQS 306
L ++ + +EA+EL M V+ + + + + L P+++ EN K+ VH + ++S
Sbjct: 360 LVRQKRGEEAVELFMEMKDSVELNPNSYMII--LTAFPEFHVLENGKRKGSEVHAFLIRS 417
Query: 307 -TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + + N +I MY KCG++ DA VF M ++ +W+ MI G N E ++
Sbjct: 418 GLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKT 477
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
F++MR+ L P+ T ++ S+C S I +H E +K G+ L+ +
Sbjct: 478 FQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLK--LGLDLDVSVSNALLALY 535
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+CG++ E Q+ L ++ + W +L A + + + E +V + + DP
Sbjct: 536 GECGYVKECQKAFSLMLDYDHVS--WNSLIG-ALADSEPSMLEAVESFLV-MMRAGWDPN 591
Query: 485 KIPTPPPKKRTAISILDGKSRL 506
++ T I+IL S L
Sbjct: 592 RV--------TFITILAAVSSL 605
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG+ ++A+++H ++ DL L N +I +Y + G + R+VFD M R++ SW
Sbjct: 87 CGS----KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSW 142
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+I+GY N + +E +LF +M G PN F +V AC
Sbjct: 143 SCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRAC 184
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + W +++H L+ + D+ ++N ++ +YG+CG + + ++ F M D SW
Sbjct: 500 CASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSW 559
Query: 347 HLMINGYADNGLGD-EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
+ +I AD+ E ++ F M + G PN TF+ + +A S E IH +
Sbjct: 560 NSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVL 619
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHL 430
K E+ L+ GKCG +
Sbjct: 620 KRNVAADTAIEN--ALLACYGKCGDM 643
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD-ARRVFDHMADRSMDSWHLMINGYADN 356
++H ++ D+ +N +I MYG M D ARR FD + R++ S + MI+ Y
Sbjct: 197 QIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQR 256
Query: 357 GLGDEGLQLFEQMRKL----GLQPNEQTFLAVFSA-CGSADA 393
G +F M+K GL+PNE TF ++ SA C A++
Sbjct: 257 GDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANS 298
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 227/457 (49%), Gaps = 46/457 (10%)
Query: 207 QGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQV--------LPPSVADLARLCQ 258
GY N S + L V + +N+ + ++ LP A ++ Q
Sbjct: 342 HGYSLKSNFLSHTS----VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 259 EGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
G ++AI L + ++ S + C K VHD + + +
Sbjct: 398 NGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+ +I MY KCGS+ +ARR+FD M ++ +W+ MI+GY +G G E L +F +M G+
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGI 517
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P TFL V AC A ++E F SM +G P +HY +V +LG+ GHL A
Sbjct: 518 APTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRAL 577
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------------KAD 482
QFIE +P +P WE L RIH D +L E + +LDP AD
Sbjct: 578 QFIEA-MPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSAD 636
Query: 483 ---PKKIPTPPPKKRTAISILDGKSRLVEF------------RNPTLYRDDEKLKAL-NQ 526
P+ K+ ++ G + L+E +P + EKL+ L +
Sbjct: 637 RNYPQAATVRQTAKKRKLAKAPGYT-LIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGK 695
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M+E+ Y P+T LHD+++E +E + HSERLAIA+GLI+T T +RIIKNLRVC DC
Sbjct: 696 MREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDC 755
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K++S+I R ++VRD RFHHFKDG CSCGDYW
Sbjct: 756 HTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
ELM G K +S +L + G+ +H Y L+S ++ + +Y K
Sbjct: 312 ELMLSGAKLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLN 368
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ AR++FD ++S+ SW+ MI+GY NGL ++ + LF +M+ PN T + S
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILS 428
Query: 387 ACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC A+ ++H S E I T L+G+ KCG + EA++ +
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVST----ALIGMYAKCGSIAEARRLFD 479
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF-EQM 369
+L+L + +++MY K + DAR+VFD M ++ W+ MI+GY N + E +Q+F + +
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ + + T L + A + + S+ ++ G G + + KCG
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLG-MQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 430 LFEAQQFIEQ 439
+ A +
Sbjct: 272 IKMASTLFRE 281
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
HDY L I +Y KCG + A +F + +++ MI+GY NG
Sbjct: 255 HDYVLTG-----------FISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGET 303
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
+ L LF+++ G + T +++ G I IH S+KS F
Sbjct: 304 ELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA--IHGYSLKSNF 350
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 223/397 (56%), Gaps = 33/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G ++A+ L + VK D+ ++ + A+ +H Y ++ + D+
Sbjct: 506 QNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVY 565
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+MY KCG ++ AR +F+ DR + +W+ MI+GY +G G ++LFE+M+ G
Sbjct: 566 VLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSG 625
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PNE TFL+V SAC A ++E +F SMK ++G+ PG EHY +V +LG+ G L EA
Sbjct: 626 KVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEA 685
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
FI QK+P EP + A+ ++H +++L + + + + +L+P +
Sbjct: 686 WSFI-QKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYAN 744
Query: 482 -----DPKKIPTPPPKKRT----AISILDGKSRLVEFRNPTLYRDDEK------LKALNQ 526
D ++ T KK SI+ K+ + F + + K K + +
Sbjct: 745 ASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEE 804
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K YVPDT + HD++ + K Q L HSE+LAIAYGLI T T ++I KNLRVC DC
Sbjct: 805 IKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDC 863
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNA K++S + GRE+I+RD +RFHHFKDGKCSCGDYW
Sbjct: 864 HNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 70/127 (55%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ G + DA ++ C + + ++VH + ++ + ++ ++++Y KCG++
Sbjct: 320 EDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVD 379
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
AR+VFD M DR+ SW+ MI GYA+NG E L LF++M G+ + + LA ACG
Sbjct: 380 SARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACG 439
Query: 390 SADAIEE 396
++E
Sbjct: 440 ELGFLDE 446
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G EA+ L + GV CG + + ++VH+ ++ + ++
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN 464
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC A +VFD + ++ SW+ MI G NG ++ ++LF +M+
Sbjct: 465 VMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN 524
Query: 374 LQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P+ T +++ A +D ++ +IH S++ + L+ + KCG +
Sbjct: 525 VKPDSFTLVSIIPALADISDPLQARWIHGYSIR--LHLDQDVYVLTALIDMYAKCGRVSI 582
Query: 433 AQQF 436
A+
Sbjct: 583 ARSL 586
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L +LC + VH + + + + MY KC DARRVFD M
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMP 287
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAF 398
R +W+ ++ GYA NGL + + + +M++ G +P+ T ++V AC A A+ A
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQAL-GAC 346
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ G ++ V KCG + A++ +
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFD 386
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 206/364 (56%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N +++H +S + D +I MY KCG + A ++F M + + SW
Sbjct: 305 CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISW 364
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI+GYA +G G + L LF++MR ++P+ TF+AV AC A ++ +F+SMK
Sbjct: 365 NAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
EFGI HY ++ +LG+ G L EA I++ +PF+P A + L RIH ++DL
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKE-MPFKPHAAIYGTLLGACRIHKNLDLA 483
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
+ A +++LDP+ A K + K S ++ KS
Sbjct: 484 EFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSV 543
Query: 506 LVEFRN-----PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
EFR+ P L +KL L+ +MK + YVPD + LHD+++E KE+ LL+HSE+L
Sbjct: 544 THEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKL 603
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
AIA+GL+ T TP+R+ KNLRVCGDCH AIK +S I RE+IVRD RFHHF++G CSC
Sbjct: 604 AIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSC 663
Query: 620 GDYW 623
GDYW
Sbjct: 664 GDYW 667
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ ++ Y K G + A R+F MA +++ +W+ MI GY +N ++GL++F+ M +
Sbjct: 229 VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++PN + +V C + A+ + S+ +S T L+ + KCG L
Sbjct: 289 SRVRPNPLSLSSVLLGCSNLSALPLGR-QMHQLVSKSPLSKDTTACTSLISMYCKCGDLD 347
Query: 432 EAQQ-FIEQ 439
A + F+E
Sbjct: 348 SAWKLFLEM 356
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
GKVKEA EL DK + D S Y + +C + A F D+ N +I
Sbjct: 119 GKVKEAHELFDKIPEPD-SVSYNIMLVCYLRSYGVEAALA---FFNKMPVKDIASWNTLI 174
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP--N 377
+ + G M A +F M +++ SW MI+GY ++G + +L+ + +G++
Sbjct: 175 SGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELY---KNVGMKSVVV 231
Query: 378 EQTFLAVFSACGSADAIEEAF 398
E L + G + E F
Sbjct: 232 ETAMLTGYMKFGKVELAERIF 252
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 224/397 (56%), Gaps = 36/397 (9%)
Query: 260 GKVKEAIELMDKGVKADAS-CFYT---LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++A++L ++ D C YT CG ++ +++H + +Q
Sbjct: 415 GLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAG 474
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY KCG++ DAR VF M + SW+ MI+ +G G E L+LF+QM G+
Sbjct: 475 NALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGID 534
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ +FL + +AC A ++E F +FESMK +FGISPG +HY L+ +LG+ G + EA+
Sbjct: 535 PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARD 594
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------- 478
I + +PFEPT WEA+ + R +GD++ +A + + + P
Sbjct: 595 LI-KTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAG 653
Query: 479 ---SKADPKKIPTP-PPKKRTAISILDGKSRLVEF-----RNP---TLYRDDEKLKALNQ 526
A +K+ KK S ++ S++ F ++P +Y+ E + A +
Sbjct: 654 RWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGA--R 711
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M++ YVPDT++VLHD++ KE L HSE+LA+ +GL+ P + ++KNLR+CGDC
Sbjct: 712 MRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDC 771
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A+ MS+ VGRE++VRD +RFHHFKDG+CSCG+YW
Sbjct: 772 HTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 258 QEGKVKEAIELMDKGVK----ADASCFYTLFELCGNPKWYENAKKVHDYFLQS----TIR 309
Q G +A EL + V D F ++ C N ++ + K VH ++
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 336
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L +NN ++ +Y K G + A+R+FD M + + SW+ +++GY D+G D+ +++F+ M
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
N+ +++ + S E+A F M++E + P Y G + G+ G
Sbjct: 397 P----YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGA 451
Query: 430 LFEAQQF 436
L +Q
Sbjct: 452 LKHGRQL 458
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
V + ++ L+ C P+ +A+KV D + + DL V+ Y + G + A
Sbjct: 198 AVLSVSNALIALYMKCDTPEASWDARKVLD---EMPDKDDLTWTTMVVG-YVRRGDVNAA 253
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ + + W+ MI+GY +G+ + +LF +M + +E TF +V SAC +A
Sbjct: 254 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 313
Query: 392 DAIEEAFIHFESMKSEF 408
F+H +S+ +
Sbjct: 314 G----FFVHGKSVHGQI 326
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 215/385 (55%), Gaps = 30/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE MD GV F +L + +K+H +++ R D ++N ++ MY +C
Sbjct: 437 IEGMDDGVSTFT--FASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARC 494
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + DA R FD M D ++ SW +I+G A +G + L +F M G++PN+ T++AV
Sbjct: 495 GYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVL 554
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC ++E HF SM+ + G+ P EHY +V +L + G + EA+QFI + +P +
Sbjct: 555 SACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINE-MPCKA 613
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------------- 488
A W+ L + R +G+ ++ + A +++L+P P + +
Sbjct: 614 DALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRS 673
Query: 489 ----PPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
K T +S +D + + EFR +P KL L ++K+ YVPDT
Sbjct: 674 LMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSI 733
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+ +E KEQ LL HSE++A+A+GLI+T A P+RI KNLRVC DCH+AIK +S+ G
Sbjct: 734 VLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTG 793
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD+ RFH KDG CSCG+YW
Sbjct: 794 REIILRDSNRFHRMKDGICSCGEYW 818
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 297 KKVHDYFLQSTIR-GDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYA 354
+ +H L+S I D V+ N ++ MY KCG++ ARRVFD M R + SW M + A
Sbjct: 60 RALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLA 119
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC------GSADAIEEAFIHFESMKSEF 408
NG E L+L +M +LGL+PN T A AC A + F+ +K+ F
Sbjct: 120 RNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFV----LKTGF 175
Query: 409 GISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GT+ +G L+ + + G L AQ+ + + E T+ W L
Sbjct: 176 W---GTDVSVGCALIDMFARNGDLVAAQRVFDGLI--ERTSVVWTLL 217
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 253 LARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G + +EL +D G + D ++ C +++H L+ +
Sbjct: 218 ITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGL 277
Query: 309 RGDLVLNNKVIEMYGKCG---SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG-LQ 364
D ++ +++MY K SM AR+VF M ++ SW +I+GY +G+ + +
Sbjct: 278 VSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMA 337
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACG 389
LF +M ++PN T+ + AC
Sbjct: 338 LFREMLNESIRPNHITYSNLLKACA 362
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 275 ADASCF-YTLFELCGNPKWYENAKKVHDYFLQSTIRG-DLVLNNKVIEMYGKCGSMTDAR 332
A +CF LF L G V + L++ G D+ + +I+M+ + G + A+
Sbjct: 149 AARACFPQELFRLAGGV--------VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQ 200
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
RVFD + +R+ W L+I Y G + ++LF M G +P+ + ++ SAC
Sbjct: 201 RVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISAC 256
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++++ ++ + + L + C N ++ +++H + L+++I V+ N ++ MY + G
Sbjct: 341 EMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESG 400
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADN--------GLGDEGLQLFEQMRKLGLQPNE 378
M +AR+ FD + + ++ S + +N G+ D+G+ F
Sbjct: 401 CMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGM-DDGVSTF------------ 447
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA-QQF 436
TF ++ SA S + + +H SMK+ F G + LV + +CG+L +A + F
Sbjct: 448 -TFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISN--SLVSMYARCGYLEDACRAF 504
Query: 437 IEQK 440
E K
Sbjct: 505 DEMK 508
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 221/394 (56%), Gaps = 29/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ + + VK D+ ++ + A+ +H Y ++ + D+ +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I+MY KCG + AR +F+ +R + +W+ MI+GY +G G ++LFE+M+ +G+ P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
NE TFL+V SAC A ++E +F SMK ++G+ PG EHY +V +LG+ G L EA F
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------- 481
I QK+P +P + A+ ++H +++L + + + + +L P +
Sbjct: 523 I-QKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581
Query: 482 --DPKKIPTPPPK----KRTAISILDGKSRLVEFRNPTLYRDDEK------LKALNQMKE 529
D ++ T K K SI+ K+ + F + + K K + ++K
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPDT + HD++ + K Q L HSE+LAIA+GLI T T ++I KNLRVC DCHNA
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S + GRE+I+RD +RFHHFKDGKCSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ L +++GV + CG + +VH+ ++ + ++
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC + A VFD + R+ SW+ MI G A NG ++ ++LF +M+
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358
Query: 374 LQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++P+ T ++V A +D ++ +IH S++ + L+ + KCG +
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIR--LHLDQDVYVLTALIDMYAKCGRV 414
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+ H + ++S + + + +++ Y KCG + AR VFD M ++ SW+ MI+GYA NG
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
E L LF +M + G+ + + LA ACG ++E + + G+
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG-MRVHELLVRIGLDSNVSVM 300
Query: 418 LGLVGVLGKC------GHLFE 432
L+ + KC H+F+
Sbjct: 301 NALITMYSKCKRVDLASHVFD 321
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L +LC + VH I + + + MY KC DARRVFD M
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVF 385
R +W+ ++ GYA NGL +++ +M+ + G +P+ T ++V
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 221/394 (56%), Gaps = 29/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ + + VK D+ ++ + A+ +H Y ++ + D+ +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I+MY KCG + AR +F+ +R + +W+ MI+GY +G G ++LFE+M+ +G+ P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
NE TFL+V SAC A ++E +F SMK ++G+ PG EHY +V +LG+ G L EA F
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------- 481
I QK+P +P + A+ ++H +++L + + + + +L P +
Sbjct: 523 I-QKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581
Query: 482 --DPKKIPTPPPK----KRTAISILDGKSRLVEFRNPTLYRDDEK------LKALNQMKE 529
D ++ T K K SI+ K+ + F + + K K + ++K
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPDT + HD++ + K Q L HSE+LAIA+GLI T T ++I KNLRVC DCHNA
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S + GRE+I+RD +RFHHFKDGKCSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ L +++GV + CG + +VH+ ++ + ++
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC + A VFD + R+ SW+ MI G A NG ++ ++LF +M+
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358
Query: 374 LQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++P+ T ++V A +D ++ +IH S++ + L+ + KCG +
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIR--LHLDQDVYVLTALIDMYAKCGRV 414
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+ H + ++S + + + +++ Y KCG + AR VFD M ++ SW+ MI+GYA NG
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
E L LF +M + G+ + + LA ACG ++E + + G+
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG-MRVHELLVRIGLDSNVSVM 300
Query: 418 LGLVGVLGKC------GHLFE 432
L+ + KC H+F+
Sbjct: 301 NALITMYSKCKRVDLASHVFD 321
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L +LC + VH I + + + MY KC DARRVFD M
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVF 385
R +W+ ++ GYA NGL +++ +M+ + G +P+ T ++V
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 217/399 (54%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ + + A C + ++ C + +A ++H +ST D V
Sbjct: 442 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 501
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+ Y KCG + DA +VF H+ +R + SW+ +I+GYA +G + L+LF++M K
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++ N+ TF+A+ S C S + F+SM+ + GI P EHY +V +LG+ G L +A
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 621
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
QFI +P P+A W AL + IH ++ L + E +++++P
Sbjct: 622 LQFIGD-IPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAA 680
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE--- 529
K + +K +S ++ K + F ++ D ++ +N M E
Sbjct: 681 AGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV--DHPDMRVINAMLEWLN 738
Query: 530 -----STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
Y+PD VLHD+D+E K + L HSERLA+AYGL+ TP P+RI+KNLR C
Sbjct: 739 LKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCL 798
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A ++S+IV RE+IVRD RFHHF+DGKCSCGDYW
Sbjct: 799 DCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ LM V + ++ + C N + K++H++ ++ DL + N +++ Y KC
Sbjct: 353 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKC 412
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
M + ++F + D + SW+ ++ G++ +GLG+E L +F +M+ + + T+ +V
Sbjct: 413 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 472
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
AC S +I A IH KS F + +G L+ KCG++ +A + + +
Sbjct: 473 RACASTASIRHAGQIHCSIEKSTF----NNDTVIGNSLIDTYAKCGYIRDALKVFQHLME 528
Query: 443 FEPTAEFWEALRNYARIHG 461
+ + W A+ + +HG
Sbjct: 529 RDIIS--WNAIISGYALHG 545
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R DL N ++ MYGK G + ARR+FD M +R+M S+ ++ +A G + LF +
Sbjct: 93 RLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRR 152
Query: 369 MRKLGLQPNEQTFLAVFSACGSADA 393
+R G + N+ + + DA
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDA 177
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I+ Y C ++DA VF+ + + W M++ Y++N + ++F +MR G
Sbjct: 199 VGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSG 258
Query: 374 LQPNEQTFLAVFSA--CGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGH 429
+PN +V A C + + + IH ++K+ TE ++G L+ + KCG
Sbjct: 259 CKPNPFALTSVLKAAVCLPSVVLGKG-IHGCAIKTL----NDTEPHVGGALLDMYAKCGD 313
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+ +A+ E +P++ + YA+
Sbjct: 314 IKDARLAFEM-IPYDDVILLSFMISRYAQ 341
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + DAR F+ + + MI+ YA + ++ +LF ++ +
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 374 LQPNEQTFLAVFSAC 388
+ PNE + +V AC
Sbjct: 360 VLPNEYSLSSVLQAC 374
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 224/397 (56%), Gaps = 36/397 (9%)
Query: 260 GKVKEAIELMDKGVKADAS-CFYT---LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++A++L ++ D C YT CG ++ K++H + +Q
Sbjct: 411 GLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAG 470
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY +CG++ DAR VF M + SW+ MI+ +G G E L+LF+QM G+
Sbjct: 471 NALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIY 530
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ +FL + +AC A +++ F +FESM+ +FGISPG +HY L+ +LG+ G + EA+
Sbjct: 531 PDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARD 590
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
I + +PFEPT WEA+ + RI+GD++L +A + + + P
Sbjct: 591 LI-KTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAG 649
Query: 481 --ADPKKIPTP----PPKKRTAISILDGKSRLVEF-----RNP---TLYRDDEKLKALNQ 526
D ++ KK S ++ +++ F ++P +YR E + A +
Sbjct: 650 RWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGA--K 707
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M++ YVPDT++ L D+ KE L HSERLA+++GL+ PA + ++KNL++CGDC
Sbjct: 708 MRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDC 767
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A+ MSR VGRE++VRD +RFHHFKDG+CSCG+YW
Sbjct: 768 HTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA EL + K + D F +L C N ++ + K VH F++ ++ D V
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIR--LQPDFV 330
Query: 314 ------LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+NN ++ +Y K G + A ++FD M + + SW+ +++GY ++G D ++F+
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M +E +++ + S E+A F M+SE + P Y G V G+
Sbjct: 391 EMP----YKSELSWMVMVSGYVHGGLAEDALKLFNQMRSE-DVKPCDYTYAGAVAACGEL 445
Query: 428 GHLFEAQQF 436
G L +Q
Sbjct: 446 GALKHGKQL 454
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
V + ++ L+ C P +A+KV D + + +L V+ K G + A
Sbjct: 194 AVLSVSNALIALYMKCDAPGVTRDARKVLDEMPE---KDELTWTTIVVGHVRK-GDVHAA 249
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R F+ + W+ MI+GY +G+ E +LF +M + P+E TF ++ SAC +A
Sbjct: 250 RSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANA 309
Query: 392 DAIEEAFIHFESMKSEF 408
F+H +S+ +F
Sbjct: 310 G----FFLHGKSVHGQF 322
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 223/405 (55%), Gaps = 38/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK EA+EL GV+ +A +L CGN + K++H + L+ I
Sbjct: 348 IASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGI 407
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +I+MY KCG + ARR FD M+ ++ SW+ ++ GYA +G E +++F
Sbjct: 408 FDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHM 467
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + G +P+ TF V SAC EE + + SM E GI P EHY LV +L + G
Sbjct: 468 MLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVG 527
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
L EA I++ +PFEP A W AL + R+H ++ L + A E + L+P+ + +
Sbjct: 528 KLEEAYSIIKE-MPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLS 586
Query: 489 PPPKKRTAISILDGKSRLVEF-------RNP------------TLYRDD----------E 519
+ + D ++R+ E +NP L D E
Sbjct: 587 NIYASK---GLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILE 643
Query: 520 KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
KL LN QMK+S Y+P T +VL D++++ KEQ L HSE+LA+ GL++T PL++IK
Sbjct: 644 KLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIK 703
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLR+C DCH IK++SR+ GRE+ VRD RFHHFKDG CSCGD+W
Sbjct: 704 NLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + + +++H + S D ++ + + MY KC + DAR++FD M DR + W
Sbjct: 114 CASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVW 173
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
MI GY+ GL +E +LF +MR G++PN ++ + + G+ +EA F M
Sbjct: 174 SAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM 231
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH Y ++ + D + + +++MYGKCG + + RVFD + + + S + + G + NG
Sbjct: 261 QVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNG 320
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
+ D L++F + + ++ N T+ ++ ++C EA F M++ +G+ P
Sbjct: 321 MVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA-YGVEPNAVTI 379
Query: 418 LGLVGVLGKCGHLFEAQQF 436
L+ G L ++
Sbjct: 380 PSLIPACGNISALMHGKEI 398
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 223/407 (54%), Gaps = 38/407 (9%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + G+ E+I +++ V ++ F ++ C + + + VH Y +++
Sbjct: 286 AIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN 345
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D+ I+MY KCG + A RVF + ++++ SW MING+ +GL E L LF
Sbjct: 346 GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLF 405
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+MR + PN TF++V SAC + IEE + HF+SM ++GI+P EHY +V +LG+
Sbjct: 406 YEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGR 465
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G + EA FI +P EP A W AL RIH +L AEE+ L P ++D +
Sbjct: 466 AGKIDEALSFI-NNMPTEPGASAWGALLGACRIHRRAEL---AEEVAKKLLPLESDQSGV 521
Query: 487 PTPPPK-----------KRTAISILD-GKSRLVEFRNPT------LYRDDEKLKALN--- 525
K+T + + + G ++V F + L+ +++ N
Sbjct: 522 YVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQI 581
Query: 526 ---------QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
+M+E YVPD R+VLHD+D E K++ L HSE+LAI +GL+++ P+RI
Sbjct: 582 ESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRI 641
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KN+RVCGDCH A K +S I R++I+RD KRFHH +DG CSCGDYW
Sbjct: 642 TKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTD 330
G + D L + CGN + K H ++ I + L +++MY KCG +
Sbjct: 209 GFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDF 268
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A ++F+ ++ R + W +I G+A NG E + +F QM + PN TF ++ AC S
Sbjct: 269 ALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSS 328
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
++++ +H +++ G+ ++Y + + KCG + A + Q +P E
Sbjct: 329 LGSLKQGRSVHGYMIRN--GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQ-IP-EKNVFS 384
Query: 450 WEALRNYARIHG 461
W + N +HG
Sbjct: 385 WSTMINGFGMHG 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 22/257 (8%)
Query: 210 PQARNSYQQVSPGHQIPNQLNNVP-------NNMNQCPAGDQVLPPSVADLARLCQEGKV 262
P +Y Q+ H N++ N + + ++ + R+ +EGK+
Sbjct: 51 PMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKL 110
Query: 263 KEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
++ L V A +CF ++ AK H ++ + GD + ++ +Y
Sbjct: 111 VDSFNL----VFAVKACF--------GLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVY 158
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
+ GS+ +A +VF+ + ++ W +MI G+ + +LF +MR+ G + +
Sbjct: 159 TELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVE 218
Query: 383 AVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+ ACG+ A +E H +K F I LV + KCG L A + E+ +
Sbjct: 219 GLIQACGNVYAGKEGKTFHGLCIKKNF-IDSNFFLQTSLVDMYMKCGFLDFALKLFEE-I 276
Query: 442 PFEPTAEFWEALRNYAR 458
+ + + +AR
Sbjct: 277 SYRDVVVWSAIIAGFAR 293
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 220/415 (53%), Gaps = 34/415 (8%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYEN 295
P D +L S+ LA Q G V EA+ L + G+K F +L CGN
Sbjct: 235 PVRDAILWNSM--LAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLL 292
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y ++ G++ +++ +I+MY KCG+++ ARR+FD + + SW MI G+A
Sbjct: 293 GKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHAL 352
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G E L LF++M L+PN TFLAV +AC A +++ + +F SM +GI P E
Sbjct: 353 HGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLE 412
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
H+ L LG+ G L EA FI + +PTA W L ++H + L + + + D
Sbjct: 413 HHAALADTLGRPGKLEEAYNFI-SGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFD 471
Query: 476 LDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF----- 509
L+P K + +K A S ++ K++ F
Sbjct: 472 LEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDK 531
Query: 510 RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P R + L + QM YVP+T V DI++E K L HSE+LAI +G+IST
Sbjct: 532 SHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIIST 591
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P T +R++KNLRVC DCH K +S+IVGRE+++RD RFHHFKDG CSCGD+W
Sbjct: 592 PPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 13/239 (5%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQE-GKVKEAI----ELMDKGVKADASCFYTL 283
L +V ++ P D V S L C E G+ EA+ E+ G K D+ ++
Sbjct: 123 LESVRKVFDEMPEKDVV---SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV 179
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ ++H + ++ D+ + + +I+MY C + +VFD++ R
Sbjct: 180 LPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA 239
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFE 402
W+ M+ G A NG DE L LF +M G++P TF ++ ACG+ A + +H
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ F + L+ + KCG++ A++ ++ P W A+ +HG
Sbjct: 300 VIRGGFDGNVFISS--SLIDMYCKCGNVSIARRIFDRIQ--SPDIVSWTAMIMGHALHG 354
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
EM G + R+VFD M ++ + SW+ ++ G A++G E L L +M + G +P+
Sbjct: 115 EMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSF 174
Query: 380 TFLAVF 385
T +V
Sbjct: 175 TLSSVL 180
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 217/399 (54%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ + + A C + ++ C + +A ++H +ST D V
Sbjct: 423 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 482
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+ Y KCG + DA +VF H+ +R + SW+ +I+GYA +G + L+LF++M K
Sbjct: 483 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 542
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++ N+ TF+A+ S C S + F+SM+ + GI P EHY +V +LG+ G L +A
Sbjct: 543 VESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 602
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
QFI +P P+A W AL + IH ++ L + E +++++P
Sbjct: 603 LQFIGD-IPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAA 661
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE--- 529
K + +K +S ++ K + F ++ D ++ +N M E
Sbjct: 662 AGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV--DHPDMRVINAMLEWLN 719
Query: 530 -----STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
Y+PD VLHD+D+E K + L HSERLA+AYGL+ TP P+RI+KNLR C
Sbjct: 720 LKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCL 779
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A ++S+IV RE+IVRD RFHHF+DGKCSCGDYW
Sbjct: 780 DCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ LM V + ++ + C N + K++H++ ++ DL + N +++ Y KC
Sbjct: 334 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKC 393
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
M + ++F + D + SW+ ++ G++ +GLG+E L +F +M+ + + T+ +V
Sbjct: 394 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 453
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
AC S +I A IH KS F + +G L+ KCG++ +A + + +
Sbjct: 454 RACASTASIRHAGQIHCSIEKSTF----NNDTVIGNSLIDTYAKCGYIRDALKVFQHLME 509
Query: 443 FEPTAEFWEALRNYARIHG 461
+ + W A+ + +HG
Sbjct: 510 RDIIS--WNAIISGYALHG 526
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R DL N ++ MYGK G + ARR+FD M +R+M S+ ++ +A G + LF +
Sbjct: 93 RLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRR 152
Query: 369 MRKLGLQPNEQTFLAVFSACGSADA 393
+R G + N+ + + DA
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDA 177
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + DAR F+ + + MI+ YA + ++ +LF ++ +
Sbjct: 281 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 340
Query: 374 LQPNEQTFLAVFSAC 388
+ PNE + +V AC
Sbjct: 341 VLPNEYSLSSVLQAC 355
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 240/471 (50%), Gaps = 56/471 (11%)
Query: 203 NQQNQGYPQARNSYQQVSPGHQIPNQL--------NNVPNNMNQCPAGDQV------LP- 247
N GY Q+ QQ+ ++ +Q+ N + QC DQ +P
Sbjct: 312 NAMIAGYVQS----QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Query: 248 ----PSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKV 299
A ++ Q G+ +EA+ L K G + S C E K++
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQL 427
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H +++ + + N ++ MYGKCGS+ +A VF+ + ++ + SW+ MI GYA +G G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG 419
E L LFE M K+ ++P++ T + V SAC +++ +F SM +GI+ +HY
Sbjct: 488 KEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTC 546
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP- 478
++ +LG+ G L EA + + +PF P A W AL +RIHGD +L + A E + +++P
Sbjct: 547 MIDLLGRAGRLDEALNLM-KSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD 605
Query: 479 -------------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPT 513
SK K + P I + + +P
Sbjct: 606 NSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPE 665
Query: 514 LYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART 572
R L+ L+ ++K+ +V T+ VLHD+++E KE L YHSE+LA+A+G++S P
Sbjct: 666 AERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGR 725
Query: 573 PLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R+IKNLRVC DCHNAIK +S+I R++IVRD+ RFHHF +G CSCGDYW
Sbjct: 726 PIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ L+ NQ P D V ++ L+ Q G V+EA ++ D+ +
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAM--LSGFAQNGFVEEARKIFDQMLV 181
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
+ + L E+A+++ D S + ++V N ++ Y + + DAR +
Sbjct: 182 KNEISWNGLLSAYVQNGRIEDARRLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
FD M R SW++MI GYA NGL E +LFE++
Sbjct: 238 FDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL+ N ++ Y K G+++ AR +F+ M ++ + SW+ M++G+A NG +E ++F+QM
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
L NE ++ + SA IE+A F+S
Sbjct: 180 ---LVKNEISWNGLLSAYVQNGRIEDARRLFDS 209
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R V N +I Y AR+VF+ M DR + SW++M++GY NG LF Q
Sbjct: 88 RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQ 147
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + + ++ A+ S +EEA F+ M + IS + GL+ + G
Sbjct: 148 MP----EKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEIS-----WNGLLSAYVQNG 198
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
+ +A++ + K+ +E + W L
Sbjct: 199 RIEDARRLFDSKMDWEIVS--WNCL 221
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 226/427 (52%), Gaps = 36/427 (8%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTL 283
+L N ++ GD V+ S+ +A Q EA+ L + G A + ++
Sbjct: 113 ELENALRVFDEMVTGDLVVWSSI--IAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSV 170
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
C E ++VH + L+ DL+LNN +++MY KCGS+ DA VF M ++ +
Sbjct: 171 LRACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDV 228
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
SW MI G A NG E L+LFE M+ LG++PN T + V AC A +EE +F S
Sbjct: 229 ISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHS 288
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
MK FGI PG EHY ++ +LG+ G L EA I + + EP A W AL N R+H ++
Sbjct: 289 MKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINE-MECEPDAVTWRALLNACRVHRNV 347
Query: 464 DLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDG 502
D+ HA + ++ LDP A + + KK S ++
Sbjct: 348 DVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEV 407
Query: 503 KSRLVEF-----RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
++ F +P + + +L + + ++ YVPDT +VL D++ E + +L YHS
Sbjct: 408 SKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHS 467
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
E+LAI +GL+S P +RI KNLR+CGDCH K+++++ R +++RD R+HHF+DG
Sbjct: 468 EKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGL 527
Query: 617 CSCGDYW 623
CSCGD+W
Sbjct: 528 CSCGDFW 534
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ ++ +GV+ + + ++ C N +++H ++ + D+ + + +I++Y +
Sbjct: 55 VLMLREGVRPNMFTYSSVLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRW 111
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + +A RVFD M + W +I G+A N GDE L+LF++M++ G + T +V
Sbjct: 112 GELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVL 171
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
AC +E +H +K + + L+ + KCG L +A
Sbjct: 172 RACTGLALLELGRQVHVHVLKYDQDLILNN----ALLDMYCKCGSLEDA 216
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I MY K G + DA+ VFD M DR++ SW MI+ Y+ L D+ L+ M + G
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 374 LQPNEQTFLAVFSAC 388
++PN T+ +V AC
Sbjct: 62 VRPNMFTYSSVLRAC 76
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 224/405 (55%), Gaps = 37/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G EA+E+ GV+ +A + C + K +HD ++
Sbjct: 1324 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 1383
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ ++ + +I+MY KCG + A++ FD M ++++ SW M+ GY +G E L +F
Sbjct: 1384 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 1443
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M + G++PN TF++V +AC A +EE + F +MK ++ I PG EHY +V + G+
Sbjct: 1444 KMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRA 1503
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------- 480
G L EA I +++ +P W +L RIH ++DL + A + + +LDP
Sbjct: 1504 GCLNEAYNLI-KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLL 1562
Query: 481 ----------ADPKKIPTPPPKKRTA----ISILDGKSRLVEF--------RNPTLYRDD 518
AD +++ ++ S+++ K R+ F + +Y+
Sbjct: 1563 SNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYL 1622
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
EKL ++++ YVP+ VLHD+D+E KE L HSE+LA+A+G++++ T + IIK
Sbjct: 1623 EKLTL--ELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIK 1680
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH IK++S++V R+ +VRD+KRFHHFKDG CSCGDYW
Sbjct: 1681 NLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA+EL + + + +L + C + +HDY +++ I + L +
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCGS+ DA VF+ M +S+ +W+ MI +GLG E L LF +M ++ ++P+
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
TF+ V AC ++E +F M +GI+P EHY + + + +L EA
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG- 326
++ +G+ AD F + + C N + K VH ++ GD+ + N +I+ Y KCG
Sbjct: 116 MVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGH 175
Query: 327 ------------------------------SMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +ARR+FD + +++ SW MINGY N
Sbjct: 176 TRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN 235
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPG 413
+E L+LF++M+ + PNE T +++ AC + IH ++K+ E G+ G
Sbjct: 236 QQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG 295
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
T L+ + KCG + +A + E +P + W ++ +HG L A L
Sbjct: 296 T----ALIDMYSKCGSIKDAIEVFET-MP-RKSLPTWNSMITSLGVHG---LGQEALNLF 346
Query: 474 VDLDPSKADPKKI 486
+++ P I
Sbjct: 347 SEMERVNVKPDAI 359
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 251 ADLARLCQEGKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
AD A L + ++E E+ D V D+ ++ C + VH + ++
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
G + + N +++ Y KCG +++VFD M ++ SW+ MI YA +GL E L++F M
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343
Query: 370 -RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLG 425
R +G++ N T AV AC A A+ IH + +K E+ + GT ++ +
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS----IIDMYC 1399
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG + A++ ++ E + W A+ +HG
Sbjct: 1400 KCGRVEMAKKTFDRMK--EKNVKSWTAMVAGYGMHG 1433
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ADLAR + A + K G+ S F + C + + H
Sbjct: 1114 IADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGF 1173
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL +++ +I+MY KCG + DAR +FD + R++ SW MI GY N D L LF+
Sbjct: 1174 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 1233
Query: 369 MRKLGLQP--------NEQTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ + + ++V SAC S I E +H +K F S G +
Sbjct: 1234 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG-VHGFVVKKGFDGSIGVGN-- 1290
Query: 419 GLVGVLGKCG 428
L+ KCG
Sbjct: 1291 TLMDAYAKCG 1300
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
L N K +++ +++H ++S + D +L K+I +Y G + A +F + + +
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
W+L+I NGL ++ L L++ M G+ ++ TF V AC + +I+ + S+
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL- 151
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++G S L+ KCGH A + E+
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEK 185
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 9/174 (5%)
Query: 335 FDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-AD 392
F D+S + SW+ +I A G E L+ F +RKLGL P +F +C + D
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ H ++ FG L+ + KCG L +A+ ++ +P +
Sbjct: 1158 LVSGRMSHQQAFV--FGFETDLFVSSALIDMYSKCGQLKDARALFDE-IPLRNVVSWTSM 1214
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
+ Y + + D+A L D + + + P +S+L SR+
Sbjct: 1215 ITGYVQ----NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 1264
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 240/471 (50%), Gaps = 56/471 (11%)
Query: 203 NQQNQGYPQARNSYQQVSPGHQIPNQL--------NNVPNNMNQCPAGDQV------LP- 247
N GY Q+ QQ+ ++ +Q+ N + QC DQ +P
Sbjct: 312 NAMIAGYVQS----QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Query: 248 ----PSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKV 299
A ++ Q G+ +EA+ L K G + S C E K++
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQL 427
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H +++ + + N ++ MYGKCGS+ +A VF+ + ++ + SW+ MI GYA +G G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG 419
E L LFE M K+ ++P++ T + V SAC +++ +F SM +GI+ +HY
Sbjct: 488 KEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTC 546
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP- 478
++ +LG+ G L EA + + +PF P A W AL +RIHGD +L + A E + +++P
Sbjct: 547 MIDLLGRAGRLDEALNLM-KSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD 605
Query: 479 -------------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPT 513
SK K + P I + + +P
Sbjct: 606 NSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPE 665
Query: 514 LYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART 572
R L+ L+ ++K+ +V T+ VLHD+++E KE L YHSE+LA+A+G++S P
Sbjct: 666 AERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGR 725
Query: 573 PLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R+IKNLRVC DCHNAIK +S+I R++IVRD+ RFHHF +G CSCGDYW
Sbjct: 726 PIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ L+ NQ P D V ++ L+ Q G V+EA ++ D+ +
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAM--LSGFAQNGFVEEARKIFDQMLV 181
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
+ + L E+A+++ D S + ++V N ++ Y + + DAR +
Sbjct: 182 KNEISWNGLLSAYVQNGRIEDARRLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
FD M R SW++MI GYA NGL E +LFE++
Sbjct: 238 FDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL+ N ++ Y K G+++ AR +F+ M ++ + SW+ M++G+A NG +E ++F+QM
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
L NE ++ + SA IE+A F+S
Sbjct: 180 ---LVKNEISWNGLLSAYVQNGRIEDARRLFDS 209
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R V N +I Y AR+VF+ M DR + SW++M++GY NG LF Q
Sbjct: 88 RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQ 147
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + + ++ A+ S +EEA F+ M + IS + GL+ + G
Sbjct: 148 MP----EKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEIS-----WNGLLSAYVQNG 198
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
+ +A++ + K+ +E + W L
Sbjct: 199 RIEDARRLFDSKMDWEIVS--WNCL 221
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 205/364 (56%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N +++H +S + D +I MY KCG + A ++F M + + +W
Sbjct: 305 CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITW 364
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI+GYA +G G + L LF++MR ++P+ TF+AV AC A ++ +F+SMK
Sbjct: 365 NAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
EFGI HY ++ +LG+ G L EA I++ +PF P A + L RIH ++DL
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKE-MPFTPHAAIYGTLLGACRIHKNLDLA 483
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
+ A +++LDP+ A K + K S ++ KS
Sbjct: 484 EFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSV 543
Query: 506 LVEFRN-----PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
EFR+ P L +KL L+ +MK + YVPD + LHD+++E KE+ LL+HSE+L
Sbjct: 544 THEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKL 603
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
AIA+GL+ T TP+R+ KNLRVCGDCH AIK +S I RE+IVRD RFHHF++G CSC
Sbjct: 604 AIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSC 663
Query: 620 GDYW 623
GDYW
Sbjct: 664 GDYW 667
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ ++ Y K G + A R+F MA +++ +W+ MI GY +N ++GL++F+ M +
Sbjct: 229 VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++PN + +V C + A+ + S+ +S T L+ + KCG L
Sbjct: 289 SRVRPNPLSLSSVLLGCSNLSALPLGR-QMHQLVSKSPLSKDTTACTSLISMYCKCGDLD 347
Query: 432 EAQQ-FIEQ 439
A + F+E
Sbjct: 348 SAWKLFLEM 356
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
GKVKEA EL DK + D S Y + +C + K +F + ++ D+ N +I
Sbjct: 119 GKVKEAHELFDKIPEPD-SVSYNIMLVCYLRSY--GVKAALAFFNKMPVK-DIASWNTLI 174
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP--N 377
+ + G M A +F M +++ SW MI+GY ++G + +L+ + +G++
Sbjct: 175 SGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELY---KNVGMKSVVV 231
Query: 378 EQTFLAVFSACGSADAIEEAF 398
E L + G + E F
Sbjct: 232 ETAMLTGYMKFGKVELAERIF 252
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 223/400 (55%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA++L + G + ++ + + C + + +++H + +++ R ++V
Sbjct: 385 QNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMV 444
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I MYGKCG M +A VF+ MA R + W+ M+ YA +G DE LQLF QM+ G
Sbjct: 445 VETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG 504
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++ + +F++V SA + ++ + + +F +M +F I+P E Y +V +LG+ G + EA
Sbjct: 505 VKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEA 564
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ + P W L R H D A E +++ DPS +
Sbjct: 565 VDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAA 624
Query: 484 -----------KKIPTPPPKK---RTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL 524
K + + KK R++I IL+ R+ EF +P + +L L
Sbjct: 625 AGDWDGVNRMRKLMRSRGVKKEPGRSSIEILN---RVHEFLEGDRSHPRRHPIYAELDVL 681
Query: 525 N-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
N +M+ + Y+PDT+ +LHD++ E KE L YHSERLAIA+GLISTP TPLR+IKNLRVC
Sbjct: 682 NSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVC 741
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A K +S++ GRE++VRD RFH+FKDG+CSC DYW
Sbjct: 742 SDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 14/246 (5%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+ L + GVKA+ F + + + K +H+ ++ D V+ ++
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+YG+C + A ++F M + + +W +M YA NG E LQLF++M+ G +P
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T +AV C A+++ IH +++ F + E L+ + GKCG + EA E
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFE 467
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM--VDLDPSKADPKKIPTPPPKKRTA 496
+ + W ++ HG D +L + LD KAD + +
Sbjct: 468 KMAKRDILV--WNSMLGAYAQHG---YYDETLQLFNQMQLDGVKADAVSFVSVLSALSHS 522
Query: 497 ISILDG 502
S+ DG
Sbjct: 523 GSVTDG 528
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + YT+F G+P + K V+ + D+ + N + M+G G + DA
Sbjct: 201 GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDA 260
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
RR+F+ M DR + +W+++I Y N E ++LF ++++ G++ N+ TF+ + + S
Sbjct: 261 RRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSL 320
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
++ + + E +K E G L+ + G+C
Sbjct: 321 TSLAKGKVIHELVK-EAGYDRDAVVATALMSLYGRC 355
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K D + F L + C + K ++ ++VH + + ++ +I+MY +CGS+ +A++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ + + + +W MI Y G D L +F QM++ + P + T++A+ +AC S ++
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 394 IEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHL 430
+++ IH + ++ F + GT L+ + KCG +
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGT----ALINMYNKCGSV 156
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 16/245 (6%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
CQ+G A+ ++ ++ V + + C + + ++ ++H LQ GD+
Sbjct: 81 CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 140
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I MY KCGS+ A F + R + SW MI + L+ +M+
Sbjct: 141 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 200
Query: 373 GLQPNEQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G+ PN+ T VF+A G + + E + M+S+ + + G G+LG
Sbjct: 201 GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDA 260
Query: 428 GHLFE---AQQFIEQKLPFEPTAE---FWEALRNYARIHGD-IDLEDHAEELMVDLDPSK 480
LFE + + + + F EA+R + R+ D + D LM+++ S
Sbjct: 261 RRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSL 320
Query: 481 ADPKK 485
K
Sbjct: 321 TSLAK 325
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 213/375 (56%), Gaps = 41/375 (10%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L +CG+ + +++H ++ + +L++ N +I MY KCG D+RR+FD M +R
Sbjct: 556 ILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEER 614
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ +W+ +I GYA +GLG E +++++ M G+ PNE TF+ + +AC A ++E + F
Sbjct: 615 DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFF 674
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+SM ++G++P EHY +V +LG+ G + A+QFI +P EP W AL +IH
Sbjct: 675 KSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFI-YDMPIEPDTVIWSALLGACKIHK 733
Query: 462 DIDLEDHAEELMVDLDPSK--------------------ADPKKIP-------------T 488
+ ++ A E + ++PS A+ +KI T
Sbjct: 734 NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793
Query: 489 PPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAK 548
K + D + +E TL E+L L +K + YVPDT +VLHDID+E K
Sbjct: 794 QIKDKMHSFVTGDKQHEQIEEIVATL----EELYTL--LKATGYVPDTEFVLHDIDEEQK 847
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
E +LLYHSE+LA+AY L++TP P++I+KNLR+CGDCH IK +S + R++ +RD R
Sbjct: 848 ESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNR 907
Query: 609 FHHFKDGKCSCGDYW 623
FHHF++G CSC D+W
Sbjct: 908 FHHFRNGSCSCEDFW 922
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ +EA+ EL G+ S ++F C N E +VH ++
Sbjct: 391 IAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGC 450
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N +I MYGKC +M AR+VF M + + SW+ + N L DE F+
Sbjct: 451 QFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDN 510
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI--SPGTEHYLGLVGVLG 425
M L ++ ++ + SA A+ EA F++M E + SP LG+ G LG
Sbjct: 511 M----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLG 565
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
+A L G++ AI + ++ +C L ++A+ + + + +
Sbjct: 298 IAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIV---- 353
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N +I Y + G + +A+ +FD M R+ SW MI GYA NG +E L L +++ +
Sbjct: 354 VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRS 413
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+ P+ + ++F AC + A+E S+ + G + L+ + GKC ++
Sbjct: 414 GMLPSLSSLTSIFFACSNIVALETG-TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 433 AQQFIEQKLP 442
A+Q + +
Sbjct: 473 ARQVFSRMVT 482
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
+ DL RL G+V EA E+ D + D + ++ + + A+ ++D +R
Sbjct: 41 IRDLGRL---GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+L + YG+ G + +ARRVFD M +R+ +W+ MI+ Y NG +LF+ M
Sbjct: 98 TGAIL----LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A++V D L+ + V N +I Y + G +T ARR+FD M R + SW+ M+ GY
Sbjct: 115 ARRVFDGMLER----NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+ + LFE+M + N ++ + S G + +A+ F M E G+ P
Sbjct: 171 SLQMVDARNLFEKMP----ERNLVSWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQS 225
Query: 416 HYLGLVGVLGKCGHL--FEAQQFIEQKLPFEPTAEFWEALRN-YARIHGDIDLEDHAEEL 472
++ + + G+L E+ + + K FE A+ N Y+R +D E
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 473 MVD 475
M++
Sbjct: 286 MIE 288
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 224/405 (55%), Gaps = 37/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G EA+E+ GV+ +A + C + K +HD ++
Sbjct: 2197 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 2256
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ ++ + +I+MY KCG + A++ FD M ++++ SW M+ GY +G E L +F
Sbjct: 2257 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 2316
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M + G++PN TF++V +AC A +EE + F +MK ++ I PG EHY +V + G+
Sbjct: 2317 KMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRA 2376
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------- 480
G L EA I +++ +P W +L RIH ++DL + A + + +LDP
Sbjct: 2377 GCLNEAYNLI-KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLL 2435
Query: 481 ----------ADPKKIPTPPPKKRTA----ISILDGKSRLVEF--------RNPTLYRDD 518
AD +++ ++ S+++ K R+ F + +Y+
Sbjct: 2436 SNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYL 2495
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
EKL ++++ YVP+ VLHD+D+E KE L HSE+LA+A+G++++ T + IIK
Sbjct: 2496 EKLTL--ELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIK 2553
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH IK++S++V R+ +VRD+KRFHHFKDG CSCGDYW
Sbjct: 2554 NLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA+EL + + + +L + C + +HDY +++ I + L +
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCGS+ DA VF+ M +S+ +W+ MI +GLG E L LF +M ++ ++P+
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
TF+ V AC ++E +F M +GI+P EHY + + + +L EA
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG- 326
++ +G+ AD F + + C N + K VH ++ GD+ + N +I+ Y KCG
Sbjct: 116 MVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGH 175
Query: 327 ------------------------------SMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +ARR+FD + +++ SW MINGY N
Sbjct: 176 TRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN 235
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS--EFGISPG 413
+E L+LF++M+ + PNE T +++ AC + IH ++K+ E G+ G
Sbjct: 236 QQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG 295
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
T L+ + KCG + +A + E +P + W ++ +HG L A L
Sbjct: 296 T----ALIDMYSKCGSIKDAIEVFET-MP-RKSLPTWNSMITSLGVHG---LGQEALNLF 346
Query: 474 VDLDPSKADPKKI 486
+++ P I
Sbjct: 347 SEMERVNVKPDAI 359
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 251 ADLARLCQEGKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
AD A L + ++E E+ D V D+ ++ C + VH + ++
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
G + + N +++ Y KCG +++VFD M ++ SW+ MI YA +GL E L++F M
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216
Query: 370 -RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLG 425
R +G++ N T AV AC A A+ IH + +K E+ + GT ++ +
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT----SIIDMYC 2272
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG + A++ ++ E + W A+ +HG
Sbjct: 2273 KCGRVEMAKKTFDRMK--EKNVKSWTAMVAGYGMHG 2306
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ADLAR + A + K G+ S F + C + + H
Sbjct: 1987 IADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGF 2046
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL +++ +I+MY KCG + DAR +FD + R++ SW MI GY N D L LF+
Sbjct: 2047 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 2106
Query: 369 MRKLGLQPNE--------QTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ + + ++V SAC S I E +H +K F S G +
Sbjct: 2107 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG-VHGFVVKKGFDGSIGVGN-- 2163
Query: 419 GLVGVLGKCG 428
L+ KCG
Sbjct: 2164 TLMDAYAKCG 2173
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
L N K +++ +++H ++S + D +L K+I +Y G + A +F + + +
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
W+L+I NGL ++ L L++ M G+ ++ TF V AC + +I+ + S+
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL- 151
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++G S L+ KCGH A + E+
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEK 185
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 9/174 (5%)
Query: 335 FDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-AD 392
F D+S + SW+ +I A G E L+ F +RKLGL P +F +C + D
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ H ++ FG L+ + KCG L +A+ ++ +P +
Sbjct: 2031 LVSGRMSHQQAFV--FGFETDLFVSSALIDMYSKCGQLKDARALFDE-IPLRNVVSWTSM 2087
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
+ Y + + D+A L D + + + P +S+L SR+
Sbjct: 2088 ITGYVQ----NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 222/404 (54%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G E++ + ++ G+K+D ++ C + E ++ H Y +QS
Sbjct: 112 AVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQS 171
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D+V+ + +++MY K GSM DA +VFD M R+ SW+ +I G A +G G++ + LF
Sbjct: 172 GFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLF 231
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
EQM + G++PNE +F+ V SAC + E +F M +GI P HY ++ +LG+
Sbjct: 232 EQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGR 291
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL---------- 476
G L EA+ FI +P EP W AL RIHG+ +L E ++ +
Sbjct: 292 AGCLDEAENFI-NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVL 350
Query: 477 -----------DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
D + K + K+ S ++ K+ + F +P L E
Sbjct: 351 LSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEF 410
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L++L+ +MK + YVP+ +VL D++ + KE +L +HSE+LAIA+G+I+T T +R+ KN
Sbjct: 411 LESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKN 470
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVCGDCH IK +S R+++VRD RFHHFKDG+CSCGDYW
Sbjct: 471 LRVCGDCHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ KGVK + T+ + C + E K+ H+Y ++ D+V+ ++ MY +CGS
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 328 MTDARRVFDHMADRSMDSWHLMIN-------------------------------GYADN 356
+ DA VFD M++RS +W+ MI GYA N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPG 413
G GDE L +F QMRK G++ + +V SAC A+E H ++S F I G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ LV + K G + +A Q + K+P
Sbjct: 181 S----ALVDMYAKSGSMEDACQVFD-KMP 204
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 213/375 (56%), Gaps = 41/375 (10%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L +CG+ + +++H ++ + +L++ N +I MY KCG D+RR+FD M +R
Sbjct: 556 ILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEER 614
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ +W+ +I GYA +GLG E +++++ M G+ PNE TF+ + +AC A ++E + F
Sbjct: 615 DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFF 674
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+SM ++G++P EHY +V +LG+ G + A+QFI +P EP W AL +IH
Sbjct: 675 KSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFI-YDMPIEPDTVIWSALLGACKIHK 733
Query: 462 DIDLEDHAEELMVDLDPSK--------------------ADPKKIP-------------T 488
+ ++ A E + ++PS A+ +KI T
Sbjct: 734 NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793
Query: 489 PPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAK 548
K + D + +E TL E+L L +K + YVPDT +VLHDID+E K
Sbjct: 794 QIKDKMHSFVTGDKQHEQIEEIVATL----EELYTL--LKATGYVPDTEFVLHDIDEEQK 847
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
E +LLYHSE+LA+AY L++TP P++I+KNLR+CGDCH IK +S + R++ +RD R
Sbjct: 848 ESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNR 907
Query: 609 FHHFKDGKCSCGDYW 623
FHHF++G CSC D+W
Sbjct: 908 FHHFRNGSCSCEDFW 922
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ +EA+ EL G+ S ++F C N E +VH ++
Sbjct: 391 IAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGC 450
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N +I MYGKC +M AR+VF M + + SW+ + N L DE F+
Sbjct: 451 QFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDN 510
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI--SPGTEHYLGLVGVLG 425
M L ++ ++ + SA A+ EA F++M E + SP LG+ G LG
Sbjct: 511 M----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLG 565
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
+A L G++ AI + ++ +C L ++A+ + + + +
Sbjct: 298 IAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIV---- 353
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N +I Y + G + +A+ +FD M R+ SW MI GYA NG +E L L +++ +
Sbjct: 354 VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRS 413
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+ P+ + ++F AC + A+E S+ + G + L+ + GKC ++
Sbjct: 414 GMLPSLSSLTSIFFACSNIVALETG-TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 433 AQQFIEQKLP 442
A+Q + +
Sbjct: 473 ARQVFSRMVT 482
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
+ DL RL G+V EA E+ D + D + ++ + + A+ ++D +R
Sbjct: 41 IRDLGRL---GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+L + YG+ G + +ARRVFD M +R+ +W+ MI+ Y NG +LF+ M
Sbjct: 98 TGAIL----LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A++V D L+ + V N +I Y + G +T ARR+FD M R + SW+ M+ GY
Sbjct: 115 ARRVFDGMLER----NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+ + LFE+M + N ++ + S G + +A+ F M E G+ P
Sbjct: 171 SLQMVDARNLFEKMP----ERNLVSWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQS 225
Query: 416 HYLGLVGVLGKCGHL--FEAQQFIEQKLPFEPTAEFWEALRN-YARIHGDIDLEDHAEEL 472
++ + + G+L E+ + + K FE A+ N Y+R +D E
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 473 MVD 475
M++
Sbjct: 286 MIE 288
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 219/385 (56%), Gaps = 28/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ D V DA ++ CG+ +++H+Y ++ ++ +L+L N +I+MY KC
Sbjct: 295 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKC 354
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR VFD M R + SW MI+ Y NG G + + LF +M+ LGL P+ F++V
Sbjct: 355 GCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVL 414
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A ++E +F+ M E I P EH++ +V +LG+ G + EA FI+Q +P EP
Sbjct: 415 SACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQ-MPMEP 473
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI-- 486
W AL + R++ ++ + A + + L P ++ D +
Sbjct: 474 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 533
Query: 487 --PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRY 538
T KK +S + +R+ F +P + E+L ++ +MKE+ YVP+T
Sbjct: 534 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDS 593
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
LHD+++E KE L HSE+LAIA+ +++T +P+RI KNLRVCGDCH A K++S+IVG
Sbjct: 594 ALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVG 653
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+ +RD RFHHF +G CSCGDYW
Sbjct: 654 REITIRDTNRFHHFYNGVCSCGDYW 678
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H ++ + ++ + N +I MYGKCG + +A RV D M R + SW+ ++ G A NG
Sbjct: 158 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNG 217
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
D+ L++ ++M LGL+P+ T ++ A + +F+ MK
Sbjct: 218 QFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMK 265
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L K++ Y CG R +FD + +++ +++MI Y +N L + L +F+ M G
Sbjct: 73 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 132
Query: 374 LQPNEQTFLAVFSA-CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P+ T+ V A GS D IH ++ ++ + GL+ + GKCG L E
Sbjct: 133 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGN--GLISMYGKCGCLVE 190
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDID--LEDHAEELMVDLDP 478
A + ++Q +P W +L +G D LE E ++ L P
Sbjct: 191 ACRVLDQ-MPCRDVVS-WNSLVAGCARNGQFDDALEVCKEMELLGLKP 236
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 227/416 (54%), Gaps = 37/416 (8%)
Query: 243 DQVLPPSV----ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYE 294
DQ+ P+V A ++ + G EA+ E++ K ++ D+ + C +
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
AK + DY ++ R D+ +N +I+M+ KCGS+ AR VFD D+ + W MI GY
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+G G + + LF M++ G+ PN+ TF+ + +AC + +EE + F SMK +GI
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARH 507
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
+HY +V +LG+ GHL EA FI +P EP W AL +I+ + L ++A E +
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFI-TTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLF 566
Query: 475 DLDPSKAD----------PKKIPTPPPKKRTAI-----------SILDGKSRLVEFR--- 510
LDP ++ K R + S+++ +L FR
Sbjct: 567 SLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGD 626
Query: 511 --NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+P E+L++L ++KE+ ++P VLHD++QE KE+ L HSERLAIAYGLIS
Sbjct: 627 KSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLIS 686
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T T LRI KNLR C +CH+A K++S++V RE++VRD RFHHFK+G CSC DYW
Sbjct: 687 TAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 25/267 (9%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+AIE+ + GV D + + C E K+VH + D+ + N ++
Sbjct: 152 DAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLV 211
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+Y KCG + AR VF+ + DR++ SW MI+GY NGL E L++F QMR+ ++P+
Sbjct: 212 ALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWI 271
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++V A + +E+ IH +K P + + L + KCG + A+ F +
Sbjct: 272 ALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEP--DLLISLTAMYAKCGQVMVARSFFD 329
Query: 439 QKLPFEPTAEFWEA-LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAI 497
Q P W A + YA+ + +E++ K I T R+AI
Sbjct: 330 QMEI--PNVMMWNAMISGYAKNGYTNEAVGLFQEMI---------SKNIRTDSITVRSAI 378
Query: 498 ------SILDGKSRLVEFRNPTLYRDD 518
LD + ++ N T YR+D
Sbjct: 379 LACAQVGSLDLAKWMGDYINKTEYRND 405
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ + + VK D ++ + + E K +H ++ + +
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + MY KCG + AR FD M ++ W+ MI+GYA NG +E + LF++M
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 366
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
++ + T + AC +++ A +I+ +++ ++ L+ + KCG
Sbjct: 367 IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNT------ALIDMFAKCG 420
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ A++ ++ L + W A+ +HG
Sbjct: 421 SVDLAREVFDRTL--DKDVVVWSAMIVGYGLHG 451
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + S + L K + G + AR+VFD + S+ W+ +I GY+ +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH 416
+ ++++ +M+ G+ P+ T V AC +E +H + + F ++
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 417 YLGLVGVLGKCGHLFEAQQFIE 438
GLV + KCG + +A+ E
Sbjct: 209 --GLVALYAKCGRVEQARIVFE 228
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 219/404 (54%), Gaps = 34/404 (8%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ + + ++ + VK F ++ C + K++H Y ++
Sbjct: 272 IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGF 331
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFD--HMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + +++MY KCG++ AR +F+ M DR M SW +I G A +G + + LF
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E+M G++P F+AV +AC A ++E + +F SM+ +FG++PG EHY + +LG+
Sbjct: 392 EEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGR 451
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L EA FI + EPT W L R H +I+L + ++ +DP I
Sbjct: 452 AGRLEEAYDFISN-MGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVI 510
Query: 487 PT---------------------PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
+ KK A S ++ +++ F +P + +E
Sbjct: 511 MSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEA 570
Query: 521 LKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L L QM++ YV DT VLHD+D+E K L HSERLAIA+G+IST + T +R+IKN
Sbjct: 571 LNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKN 630
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+RVC DCH AIK M++IVGRE+IVRDN RFHHFK+G CSCGDYW
Sbjct: 631 IRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 161/403 (39%), Gaps = 44/403 (10%)
Query: 209 YPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI-- 266
+PQAR+++ + ++++V ++ P D V +V +A Q G +EA+
Sbjct: 134 FPQARHNHNN-----KYSVKIDSVRKLFDRMPVRDVVSWNTV--IAGNAQNGMYEEALNM 186
Query: 267 --ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
E+ + ++ D+ ++ + K++H Y ++ D+ + + +I+MY K
Sbjct: 187 VKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAK 246
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
C + + F +++R SW+ +I G NG D+GL F +M K ++P + +F +V
Sbjct: 247 CTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSV 306
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC A+ + G L+ + KCG++ A+ + +
Sbjct: 307 IPACAHLTALNLG-KQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCD 365
Query: 445 PTAEFWEALRNYARIHGD-IDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGK 503
W A+ +HG +D EE++VD P +++L
Sbjct: 366 RDMVSWTAIIMGCAMHGHALDAVSLFEEMLVD------------GVKPCYVAFMAVLTAC 413
Query: 504 SR--LVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
S LV DE K N M+ V ++ A LL + RL
Sbjct: 414 SHAGLV----------DEGWKYFNSMQRDFGVAP------GLEHYAAVADLLGRAGRLEE 457
Query: 562 AYGLISTPARTPL-RIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
AY IS P + L H I++ ++V + L+V
Sbjct: 458 AYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLV 500
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 227/420 (54%), Gaps = 36/420 (8%)
Query: 239 CPAGDQVLPPSVADLARLC----QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNP 290
C D++ P A + + Q G+ EA+ E+ + V +DA ++ +CG+
Sbjct: 162 CVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDL 221
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
+ K VH Y + ++ D+VL ++ MY KCGS+ +A +VF MA+R + +W MI
Sbjct: 222 GALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMI 281
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
GYA +G G++ LQLF+ M++ PN TF +V SAC + +E+ FE+M +E+ I
Sbjct: 282 AGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKI 341
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
+P +HY +V + + G + A +FI Q +P EP W L + HG DL +H
Sbjct: 342 TPQIKHYGCMVDLFCRAGMVGHAHKFI-QTMPIEPNVVLWRTLLGACKTHGYKDLGEHIS 400
Query: 471 ELMVDLDPSKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF 509
++ LDPS + + + PKK+ S ++ + +F
Sbjct: 401 RKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKF 460
Query: 510 -RNPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAY 563
+ + EK+ + ++K+ +V T VLHDID+E KE AL HSERLAIAY
Sbjct: 461 IMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAY 520
Query: 564 GLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GL+ TP +P+RI+KNLRVC DCH IK++S + RE+IVRD RFHHF++ CSC DYW
Sbjct: 521 GLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ ++ F + + C +++H ++ + + L N +I++Y CG M A
Sbjct: 102 GISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYA 161
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+FD M + SW M++GYA NG E L+LF +M+ + + T +V CG
Sbjct: 162 CVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDL 221
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A++ ++H S + G+ LVG+ KCG L A + + + TA W
Sbjct: 222 GALDLGKWVH--SYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTA--W 277
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
+ IHG H E+ + D K K IP
Sbjct: 278 STMIAGYAIHG------HGEKALQLFDAMK-RSKTIP 307
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 5/161 (3%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC--GSMTDARRVFDHMADRSMDSWHLMING 352
+ K + + +++ + D L +K+IE G + A R+F ++ W+ +I G
Sbjct: 22 DLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRG 81
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
Y+ + + L+ M G+ PN TF V AC + E S + G+
Sbjct: 82 YSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEG-QELHSQIVKVGLDF 140
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
T GL+ + CG + A ++ +P EP + W +
Sbjct: 141 ETPLVNGLIKLYAACGCMDYACVMFDE-MP-EPDSASWSTM 179
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 219/388 (56%), Gaps = 36/388 (9%)
Query: 263 KEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
KE IEL D V + S + + L E + VH +++ + GD+ + + +++MY
Sbjct: 253 KEGIELTDYMVSSVISAYAGISGL-------EFGRSVHALAVKACVEGDIFVGSALVDMY 305
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
GKCGS+ D +VF M +R++ SW+ MI+GYA G D + LFE+M+ + N T +
Sbjct: 306 GKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLI 364
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
V SAC A++ FESM+ + I PG EHY + +LG+ G + A +F+ QK+P
Sbjct: 365 CVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV-QKMP 423
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD-------------------- 482
PT W AL N R++G+ +L A + + LDP +
Sbjct: 424 IRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATL 483
Query: 483 -PKKIPTPPPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKESTYVPD 535
K++ KK S + K+++ F+ T + + +++A+ +M+ + Y+PD
Sbjct: 484 VRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPD 543
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T Y L+D+++E K + YHSE++A+A+GLI+ P P+RI KNLR+CGDCH+A K +S
Sbjct: 544 TNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISG 603
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IVGRE+IVRDN RFH F+D +CSC D+W
Sbjct: 604 IVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 9/207 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+ + IE G + D F C + + + +++H ++S GD+ + N +I++
Sbjct: 144 IDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDV 203
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
YGKC + A VF+ M R+ SW M+ N ++ +F RK G++ +
Sbjct: 204 YGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMV 263
Query: 382 LAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+V SA +E +H ++K+ E I G+ LV + GKCG + + +Q +
Sbjct: 264 SSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS----ALVDMYGKCGSIEDCEQ-VF 318
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDL 465
++P E W A+ + GD+D+
Sbjct: 319 HEMP-ERNLVSWNAMISGYAHQGDVDM 344
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H L+ D + +MY K G +A+R+FD M R++ W+ I+
Sbjct: 77 GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
+G + + F + R++G +P+ TF A +AC A ++ +H ++S F
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196
Query: 415 EHYLGLVGVLGKC 427
+ G++ V GKC
Sbjct: 197 AN--GIIDVYGKC 207
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 216/395 (54%), Gaps = 36/395 (9%)
Query: 262 VKEAIELMDK--GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ--STIRGDLVLNNK 317
+K +E++ + GV +A + C + K++H Y L+ + N
Sbjct: 499 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 558
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I+MY KCG + AR VFD M+ +S SW M+ GY +G G E L +F++MRK G P+
Sbjct: 559 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 618
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TFL V AC +++ +F+SM +++G++P EHY + +L + G L +A + +
Sbjct: 619 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 678
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----------------- 480
+ +P EPTA W AL + R+H +++L +HA +V+++
Sbjct: 679 -KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 737
Query: 481 ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
D +I KKR S + G+ F +P +Y E L ++++K
Sbjct: 738 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL--IDRIK 795
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVP+T + LHD+D+E K L+ HSE+LA+AYGL++T P+RI KNLRVCGDCH+
Sbjct: 796 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHS 855
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A +S+IV E++VRD RFHHFK+G CSCG YW
Sbjct: 856 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
++D + CG+ K K+VH +++ D+ + N +I+ Y KCG M +A +
Sbjct: 262 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVK 321
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ M + + SW+ M+ GY+ +G + +LF+ MRK + + T+ AV +
Sbjct: 322 VFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGC 381
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
EA F M S + + ++ VL C L Q E
Sbjct: 382 SHEALNLFRQMI----FSGSLPNCVTIISVLSACASLGAFSQGTE 422
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+ L + G + ++ C + + ++H Y L++
Sbjct: 371 AVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN 430
Query: 307 TIRG----------DLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYA 354
+ DL++ N +I+MY KC S AR +FD + +R++ +W +MI G+A
Sbjct: 431 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 490
Query: 355 DNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSACGSADAI 394
G ++ L+LF +M G+ PN T + AC AI
Sbjct: 491 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAI 532
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G++ AI ++ G + D + + CG Y H + ++
Sbjct: 132 KQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 191
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMR 370
+ N ++ MY +CGS+ +A +FD + R +D SW+ +++ + + L LF +M
Sbjct: 192 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 251
Query: 371 KLGLQ--PNEQ----TFLAVFSACGSADAI-EEAFIHFESMKSEFGISPGTEHYLGLVGV 423
+ + NE+ + + + ACGS A+ + +H ++++ G P L+
Sbjct: 252 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDA 309
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG L E + + F+ W A+
Sbjct: 310 YAKCG-LMENAVKVFNMMEFKDVVS-WNAM 337
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 209/380 (55%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D F TL + E +++H ++ D + +++MY KCG++ DA
Sbjct: 489 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 548
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
R+F M R++ W+ M+ G A +G +E + LF+ M+ G++P+ +F+ + SAC A
Sbjct: 549 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 608
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
EA+ + SM +++GI P EHY LV LG+ G + EA + IE +PF+ +A A
Sbjct: 609 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIET-MPFKASASINRA 667
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L RI GD++ + L+P + K +
Sbjct: 668 LLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNV 727
Query: 492 KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
KK S +D K+ L F + +Y E++ + ++E YVPDT +VL D+
Sbjct: 728 KKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEM--MKTIREDGYVPDTEFVLLDV 785
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ E KE++L YHSE+LAIAYGLISTPA T +R+IKNLRVCGDCHNAIK +S++ RE+++
Sbjct: 786 EDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVL 845
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF+DG CSCGDYW
Sbjct: 846 RDANRFHHFRDGVCSCGDYW 865
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 258 QEGKVKEAIELMDKGVKAD-----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
+E V I+L+ +G+K D + T + CG + K++H + +++ DL
Sbjct: 368 EEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 427
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+N+ +++MY KCG M +A VF++++ +W MI+G DNG D+ L+++ +MR+
Sbjct: 428 HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 487
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP--GTEHYLGLVGVLGKCGH 429
+ P+E TF + A A+E+ +H +K + P GT LV + KCG+
Sbjct: 488 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTS----LVDMYAKCGN 543
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
+ +A + +K+ A W A+ HG+
Sbjct: 544 IEDAYRLF-KKMNVRNIA-LWNAMLVGLAQHGN 574
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ +LC N A+ VH Y ++ + D+ ++ ++ +Y KCG M DAR +FD M +R
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 248
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ W++M+ GY GL E QLF + + GL+P+E + + + C
Sbjct: 249 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGC 294
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA- 354
K H + S GD L+N ++ MY KCGS++ AR+VFD +R + +W+ ++ YA
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 355 ----DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFG 409
++G EGL LF +R T V C ++ + A +H ++K G
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK--IG 213
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ LV + KCG + +A+ +
Sbjct: 214 LEWDVFVSGALVNIYSKCGRMRDARLLFD 242
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K+VH ++S + D+ + N ++ MY K G AR VF+ M + SW+ MI+
Sbjct: 303 ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSC 362
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF-----SACGSADAIEEAF-IHFESMKSE 407
A + L +E + LF + GL+P+ T ++ ACG +++ IH ++K+
Sbjct: 363 AQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAG 422
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEA 433
F G++ + KCG + A
Sbjct: 423 FDSDLHVNS--GILDMYIKCGDMVNA 446
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 216/395 (54%), Gaps = 32/395 (8%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K ++ GV D ++ C E K+VH F++S +R + N
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MY KCG + DA +F M + + +W +I GYA NG G L+ ++ M G +P+
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPD 565
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TF+ + AC A ++E +F+ M +GI PG EHY ++ + G+ G L EA+Q +
Sbjct: 566 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 625
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------------- 483
+Q + +P A W++L + R+H +++L + A + +L+P A P
Sbjct: 626 DQ-MDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKW 684
Query: 484 -------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
K + + K S L+ SR+ F R +Y +++ + ++K
Sbjct: 685 NDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEI--ILRIK 742
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E+ YVPD + LHD+D+E KE L YHSE+LA+A+GL++ P P+RI KNLRVCGDCH+
Sbjct: 743 EAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHS 802
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A+K +SR+ R +I+RD+ FHHF++G+CSCGDYW
Sbjct: 803 AMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 16/271 (5%)
Query: 173 YPHQQQPHSNQYQNPGNQNFQQPRSPNQWNNQQNQGYPQA---RNSYQQ--VSPGHQIPN 227
Y H Q NQY P + Q + ++ N Y Q + +
Sbjct: 255 YMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCG 314
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTL 283
L N N + D V S+ + + G +EA+ L + +K D F ++
Sbjct: 315 DLKNAKNMLETMEDDDVVSWNSL--MVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSV 372
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
C N K VH +++ +++N +++MY K G M A VF+ M ++ +
Sbjct: 373 LNCCVVGS--INPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDV 430
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFE 402
SW ++ GYA N +E L++F MR G+ P++ ++ SAC +E +H +
Sbjct: 431 ISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLD 490
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+KS G+ Y LV + KCG L +A
Sbjct: 491 FIKS--GLRWSQSVYNSLVAMYAKCGCLDDA 519
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 26/235 (11%)
Query: 257 CQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C+ G EA +L +G KA ++ +C + + + +H + +++ G++
Sbjct: 138 CKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNV 197
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDS-WHLMINGYADNGLGDEGLQLFEQMR 370
+ +++MY KC +++A +F + DR W M+ GYA NG G + ++ F M
Sbjct: 198 FVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMH 257
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G++ N+ TF + +AC S + F +H +KS FG + + LV + KC
Sbjct: 258 AQGVECNQYTFPTILTACSS--VLARCFGEQVHGFIVKSGFGSNVYVQS--ALVDMYAKC 313
Query: 428 GHLFEAQQFIEQ------------KLPFEPTAEFWEALRNYARIHG-DIDLEDHA 469
G L A+ +E + F EALR + +HG ++ ++D+
Sbjct: 314 GDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 368
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 28/257 (10%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +A+E +GV+ + F T+ C + ++VH + ++S ++
Sbjct: 242 QNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVY 301
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY KCG + +A+ + + M D + SW+ ++ G+ +GL +E L+LF+ M
Sbjct: 302 VQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRN 361
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGH 429
++ ++ TF +V + C +I +H +K+ G E+Y LV + K G
Sbjct: 362 MKIDDYTFPSVLNCC-VVGSINPKSVHGLIIKT------GFENYKLVSNALVDMYAKTGD 414
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP 489
+ A E+ L E W +L + G H E L + D ++
Sbjct: 415 MDCAYTVFEKML--EKDVISWTSL-----VTGYAQNNSHEESLKIFCD------MRVTGV 461
Query: 490 PPKKRTAISILDGKSRL 506
P + SIL + L
Sbjct: 462 NPDQFIVASILSACAEL 478
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y G + +AR +FD + +S +W +I+GY G E LF MR G +
Sbjct: 100 NTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWK 159
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
++ T +V C S I+ IH +K+ G GLV + KC + EA
Sbjct: 160 ASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKN--GFEGNVFVVTGLVDMYAKCKCVSEA- 216
Query: 435 QFIEQKLPFE-PTAEFWEAL 453
+F+ + L F+ W A+
Sbjct: 217 EFLFKGLEFDRKNHVLWTAM 236
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 207/391 (52%), Gaps = 64/391 (16%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ D+ + + +I+MY KC + D+ RVF + SW+ +I G
Sbjct: 255 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQ 314
Query: 356 NGLGDEGLQLFEQM------------------------------------RKLGLQPNEQ 379
NG+ DEGL+ F+QM R G++PN
Sbjct: 315 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYV 374
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+AV +AC A ++EA+ +F SM ++ I PG EHY + +LG+ G L EA +FI
Sbjct: 375 AFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISD 434
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------D 482
+ EPT W L R+H +I+L + + + +DP D
Sbjct: 435 -MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKD 493
Query: 483 PKKIPTPP----PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTY 532
+K+ KK+ A S ++ K+++ F +P R +E LK L QM+ Y
Sbjct: 494 ARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGY 553
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
V DT VLHD+++E K L HSERLAI +G+ISTPA T +R+ KNLRVC DCH A K
Sbjct: 554 VLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKF 613
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S+IVGRE++VRDN RFHHFKDGKCSCGD+W
Sbjct: 614 ISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I+++ G D + F ++ + C K + VH ++ + DL N ++ MY K
Sbjct: 95 IQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKF 154
Query: 326 GSMTDA-----------------------------RRVFDHMADRSMDSWHLMINGYADN 356
S+ + R+VF+ M R + SW+ +I+G A N
Sbjct: 155 WSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQN 214
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G+ ++ L + +M L+P+ T +V
Sbjct: 215 GMHEDALMMVREMGNADLRPDSFTLSSVL 243
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 217/394 (55%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E V+ ++ G++ D ++ C N E + H L S + + ++N +
Sbjct: 353 EEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNAL 412
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I +YGKCGS+ D+ ++FD M+ R SW +++GYA G +E + LFE+M GL+P+
Sbjct: 413 ITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDA 472
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+AV SAC A +E +FESM + GI P ++HY ++ + G+ G L EA+ FI
Sbjct: 473 VTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFI- 531
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKADPK 484
K+PF P + W L + R++G+ ++ A E +++LDP +K
Sbjct: 532 NKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWS 591
Query: 485 KIP-------TPPPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKALNQMKE 529
+ +K S + KS++ F + +Y + EKL ++M E
Sbjct: 592 NVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLN--HKMIE 649
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPD VLHD++ K + L +HSE+LAIA+GL+ P P+R++KNLRVCGDCHNA
Sbjct: 650 EGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNA 709
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I RE++VRD RFH FKDG CSCGD+W
Sbjct: 710 TKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 128/263 (48%), Gaps = 22/263 (8%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ L Q G EA++L +G+ D F ++ CG + + K++H ++S
Sbjct: 242 ITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGY 301
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + + +++MY KC S+ A VF MA++++ SW M+ GY NG +E +++F
Sbjct: 302 NHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCD 361
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M++ G++P++ T +V S+C + ++EE A H +++ S G+ L+ + GKC
Sbjct: 362 MQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVS--GLISFITVSNALITLYGKC 419
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
G + ++ Q ++ + F + + YA+ + D E ++V
Sbjct: 420 GSIEDSNQLFDE-MSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQ------------ 466
Query: 488 TPPPKKRTAISILDGKSR--LVE 508
P T I++L SR LVE
Sbjct: 467 GLKPDAVTFIAVLSACSRAGLVE 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V+ N +I + G + D++R+F M +R SW MI G NGL E + LF MR
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
+ G+ ++ TF +V +ACG A++E
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEG 289
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
+LC + AKK+H ++S + L N +I Y K G++T AR VFD M +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 345 SWHLMINGYADNG 357
SW+ M++ Y+ +G
Sbjct: 73 SWNTMLSAYSKSG 85
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 227/419 (54%), Gaps = 41/419 (9%)
Query: 243 DQVLPPSV----ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYE 294
D++L P V A + + + EA+ L + +K + ++ C +
Sbjct: 186 DEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALD 245
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K +H+Y ++ + + +N +I+MY KCGS+ A VF+ M+ R +W MI YA
Sbjct: 246 LGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYA 305
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+G G + + +FE+M + +QP+E TFL + AC ++E F +F SM +GI PG
Sbjct: 306 MHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGI 365
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
+HY +V +LG+ G L EA +FI++ LP +PT W L + HG+++L ++
Sbjct: 366 KHYGCMVDLLGRAGLLHEAYKFIDE-LPIKPTPILWRTLLSSCSSHGNLELAKQVMNQIL 424
Query: 475 DLDPSKADPKKIPTPPPKKRTAISILDGKSRL---------------------------- 506
+LD S I + + +D +L
Sbjct: 425 ELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGD 484
Query: 507 -VEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLH-DIDQEAKEQALLYHSERLAIAYG 564
V + + L+R ++L + ++K YVPDT V+H D++ E KE L YHSE+LAI++G
Sbjct: 485 GVHYVSTALHRALDEL--VKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFG 542
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
L++TP T +R++KNLRVCGDCH+A K++S ++ RE+I+RD +RFHHFKDGKCSCGDYW
Sbjct: 543 LLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I+ ++ + D F +L + C K ++ K++H ++ + + + +I MY C
Sbjct: 116 IKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGC 175
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ A+RVFD + + + S++ +I GYA + +E L LF Q++ L+PN+ T L+V
Sbjct: 176 NDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVL 235
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQK 440
S+C A++ +IH E+ G + Y+ L+ + KCG L A E
Sbjct: 236 SSCALLGALDLGKWIH------EYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESM 289
Query: 441 LPFEPTAEFWEALRNYARIHG 461
+ A W A+ +HG
Sbjct: 290 SVRDTQA--WSAMIVAYAMHG 308
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 209/380 (55%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D F TL + E +++H ++ D + +++MY KCG++ DA
Sbjct: 127 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 186
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
R+F M R++ W+ M+ G A +G +E + LF+ M+ G++P+ +F+ + SAC A
Sbjct: 187 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 246
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
EA+ + SM +++GI P EHY LV LG+ G + EA + IE +PF+ +A A
Sbjct: 247 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIET-MPFKASASINRA 305
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L RI GD++ + L+P + K +
Sbjct: 306 LLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNV 365
Query: 492 KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
KK S +D K+ L F + +Y E++ + ++E YVPDT +VL D+
Sbjct: 366 KKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEM--MKTIREDGYVPDTEFVLLDV 423
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ E KE++L YHSE+LAIAYGLISTPA T +R+IKNLRVCGDCHNAIK +S++ RE+++
Sbjct: 424 EDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVL 483
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF+DG CSCGDYW
Sbjct: 484 RDANRFHHFRDGVCSCGDYW 503
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 263 KEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
K+A+EL G K+D T + CG + K++H + +++ DL +N+ +
Sbjct: 12 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG M +A VF++++ +W MI+G DNG D+ L+++ +MR+ + P+E
Sbjct: 72 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP--GTEHYLGLVGVLGKCGHLFEAQQ 435
TF + A A+E+ +H +K + P GT LV + KCG++ +A +
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTS----LVDMYAKCGNIEDAYR 187
Query: 436 FIEQKLPFEPTAEFWEAL 453
+K+ A W A+
Sbjct: 188 LF-KKMNVRNIA-LWNAM 203
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 216/395 (54%), Gaps = 36/395 (9%)
Query: 262 VKEAIELMDK--GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ--STIRGDLVLNNK 317
+K +E++ + GV +A + C + K++H Y L+ + N
Sbjct: 506 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 565
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I+MY KCG + AR VFD M+ +S SW M+ GY +G G E L +F++MRK G P+
Sbjct: 566 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 625
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TFL V AC +++ +F+SM +++G++P EHY + +L + G L +A + +
Sbjct: 626 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 685
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----------------- 480
+ +P EPTA W AL + R+H +++L +HA +V+++
Sbjct: 686 -KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 744
Query: 481 ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
D +I KKR S + G+ F +P +Y E L ++++K
Sbjct: 745 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL--IDRIK 802
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVP+T + LHD+D+E K L+ HSE+LA+AYGL++T P+RI KNLRVCGDCH+
Sbjct: 803 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHS 862
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A +S+IV E++VRD RFHHFK+G CSCG YW
Sbjct: 863 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
++D + CG+ K K+VH +++ D+ + N +I+ Y KCG M +A +
Sbjct: 269 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVK 328
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ M + + SW+ M+ GY+ +G + +LF+ MRK + + T+ AV +
Sbjct: 329 VFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGC 388
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
EA F M S + + ++ VL C L Q E
Sbjct: 389 SHEALNLFRQMI----FSGSLPNCVTIISVLSACASLGAFSQGTE 429
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+ L + G + ++ C + + ++H Y L++
Sbjct: 378 AVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN 437
Query: 307 TIRG----------DLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYA 354
+ DL++ N +I+MY KC S AR +FD + +R++ +W +MI G+A
Sbjct: 438 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 497
Query: 355 DNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSACGSADAI 394
G ++ L+LF +M G+ PN T + AC AI
Sbjct: 498 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAI 539
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G++ AI ++ G + D + + CG Y H + ++
Sbjct: 139 KQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 198
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMR 370
+ N ++ MY +CGS+ +A +FD + R +D SW+ +++ + + L LF +M
Sbjct: 199 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 258
Query: 371 KLGLQ--PNEQ----TFLAVFSACGSADAI-EEAFIHFESMKSEFGISPGTEHYLGLVGV 423
+ + NE+ + + + ACGS A+ + +H ++++ G P L+
Sbjct: 259 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDA 316
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG L E + + F+ W A+
Sbjct: 317 YAKCG-LMENAVKVFNMMEFKDVVS-WNAM 344
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 227/400 (56%), Gaps = 39/400 (9%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G VKEA+ L +G+K D + + AK +H +++ + ++
Sbjct: 424 QNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVF 483
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ +++MY KCG++ AR++FD M +R + +W+ MI+GY +G+G E L LF +M+K
Sbjct: 484 VSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGA 543
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ TFL+V SAC + +EE + F+SM+ ++ + P +HY +V +LG+ G L +A
Sbjct: 544 VKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDA 603
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------P 483
FI Q++P +P A+ +IH +++L + A + + LDP +
Sbjct: 604 WNFI-QEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYAS 662
Query: 484 KKIPTPPPKKRTAISILDGK-------SRLVEFRNP--TLYR------DDEKLKAL---- 524
+ K RTA ++ K VE RN T Y + +K+ A
Sbjct: 663 NSMWDKVAKVRTA---MEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETL 719
Query: 525 -NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+++K + YVPD + HD++++ K+Q L HSERLAIA+GL++T T L I KNLRVC
Sbjct: 720 GDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVC 778
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH+ K +S + GRE+IVRD +RFHHFK+G CSCGDYW
Sbjct: 779 GDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G K A++L+ + G K D+ ++ + K + +H Y +S
Sbjct: 218 VAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGF 277
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N +++MY KCGS AR VF M +++ SW+ MI+G A NG +E F +
Sbjct: 278 ESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLK 337
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
M G P T + V AC + +E F+H
Sbjct: 338 MLDEGEVPTRVTMMGVLLACANLGDLERGWFVH 370
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D +C L +LCG + +++H + + +L + V+ +Y KC + +A
Sbjct: 144 VVGDYAC---LLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAY 200
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
++F+ M + + SW ++ GYA NG LQL QM++ G +P+ T +++ A
Sbjct: 201 KMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMK 260
Query: 393 AIEEA-FIHFESMKSEF 408
A+ IH + +S F
Sbjct: 261 ALRIGRSIHGYAFRSGF 277
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA ++++D+G + C N E VH + + ++
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVS 383
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KC + A +F+++ +++ +W+ MI GYA NG E L LF M+ G
Sbjct: 384 VMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQG 442
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++ + T + V +A +A +IH ++++ + LV + KCG +
Sbjct: 443 IKLDCFTLVGVITALADFSVNRQAKWIHGLAVRA--CMDNNVFVSTALVDMYAKCGAIKT 500
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A++ + + E W A+ + HG
Sbjct: 501 ARKLFD--MMQERHVITWNAMIDGYGTHG 527
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ KVI ++ K GS ++A RVF+H+ + +H+M+ GYA N + L F +M
Sbjct: 80 LFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRM 136
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 223/400 (55%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA++L + G + ++ + + C + + +++H + +++ R ++V
Sbjct: 386 QNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMV 445
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I MYGKCG M +AR VF+ MA R + W+ M+ YA +G DE LQLF QM+ G
Sbjct: 446 VETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG 505
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ + +F++V SA + ++ + + +F +M +F I+P E Y +V +LG+ G + EA
Sbjct: 506 EKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEA 565
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ + P W L R H D A E +++ DPS +
Sbjct: 566 VDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAA 625
Query: 484 -----------KKIPTPPPKK---RTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL 524
K + + KK R++I IL+ R+ EF +P + +L L
Sbjct: 626 AGDWDGVNRMRKLMRSRGVKKEPGRSSIEILN---RVHEFLEGDRSHPRRHPIYAELDVL 682
Query: 525 N-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
N +M+ + Y+PDT+ +LHD++ E KE L YHSERLAIA+GL+STP TPLR+IKNLRVC
Sbjct: 683 NSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVC 742
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A K +S++ GRE++VRD RFH+FKDG+CSC DYW
Sbjct: 743 SDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 14/251 (5%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+ L + G+KA+ F + + + K +H+ ++ D+V+ ++
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+YG+C + A ++F M + + +W +M YA NG E LQLF++M+ G +P
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T +AV C A+++ IH +++ F + E L+ + GKCG + EA+ E
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFE 468
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM--VDLDPSKADPKKIPTPPPKKRTA 496
+ + W ++ HG D +L + LD KAD + +
Sbjct: 469 KMAKRDILV--WNSMLGAYAQHG---YYDETLQLFNQMQLDGEKADAVSFVSVLSALSHS 523
Query: 497 ISILDGKSRLV 507
S+ DG V
Sbjct: 524 GSVTDGYQYFV 534
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K D + F L + C + K ++ ++VH + + ++ +I+MY +CGS+ +A++
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ + + + +W MI Y G D L +F QM++ + P + T++A+ +AC S ++
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 394 IEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHL 430
+++ IH + ++ F + GT L+ + KCG +
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGT----ALINMYNKCGSV 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + YT+F G+P + K ++ + D+ + N + M+G G + DA
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDA 261
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
RR+F+ M DR + +W+++I Y N E ++LF ++++ G++ N+ TF+ + + S
Sbjct: 262 RRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSL 321
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
++ + + E +K E G L+ + G+C
Sbjct: 322 TSLAKGKVIHELVK-EAGYDRDVVVATALMSLYGRC 356
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 20/247 (8%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
CQ+G A+ ++ ++ V + + C + + ++ ++H LQ GD+
Sbjct: 82 CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 141
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I MY KCGS+ A F + R + SW MI + L+ +M+
Sbjct: 142 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 201
Query: 373 GLQPNEQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G+ PN+ T VF+A G + E + + M+S+ + + G G+LG
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDA 261
Query: 428 GHLFEAQQFIEQKLP--------FEPTAEFWEALRNYARIHGD-IDLEDHAEELMVDLDP 478
LFE +++ + + F EA+R + R+ D I D LM+++
Sbjct: 262 RRLFE--DMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYT 319
Query: 479 SKADPKK 485
S K
Sbjct: 320 SLTSLAK 326
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 223/409 (54%), Gaps = 41/409 (10%)
Query: 253 LARLCQEGKVKEAIELMD---------KGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
+A L + ++E+ EL D KG+ + F TL + C +K+H
Sbjct: 247 VAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAV 306
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+ DLV++N ++ YG+CG++ DA+ VFD M R + SW MI+ +A G DE +
Sbjct: 307 AERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAM 366
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
+L+ +M G P++ F++V AC ++ +E + F S+ + + P EHY +V V
Sbjct: 367 ELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDV 426
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
LG+ G L +A+ + + +PF P + + + +++ D++ + A E++ +LDP + P
Sbjct: 427 LGRAGKLRDAEDLL-RLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSP 485
Query: 484 ---------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTL 514
K + KK+ S ++ R+ EF + +
Sbjct: 486 YITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEI 545
Query: 515 YRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPL 574
Y + ++L QMKE+ Y DT+ VL D++++ KE L YHSE+LAIA+GLISTP PL
Sbjct: 546 YAEIQRLG--RQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPL 603
Query: 575 RIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RI+KNLRVC DCH A K++S++ GRE++VRD RFHHF++G CSC DYW
Sbjct: 604 RIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL+ ++ Y G + R +F M +R + SW M+ +N L +E +LF++M
Sbjct: 208 DLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMP 267
Query: 371 K-----LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
+ G+ PN TF+ + AC A+ E IH + +E G LV
Sbjct: 268 RHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIH--AAVAERGFDTDLVVSNALVNFY 325
Query: 425 GKCGHLFEAQ 434
G+CG L +A+
Sbjct: 326 GRCGALGDAK 335
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM--RKLGLQ 375
++ +Y + G +++A+ VFD M S+ SW +++ +A +G +E LF+ M R L
Sbjct: 29 MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAW 88
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESM 404
T LA FS IE+A HF+ M
Sbjct: 89 TIMLTVLATFS------NIEDAKYHFDQM 111
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
M+G+ G + AR++FD +ADR SW +M++ YA +G +F++M + L +
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSL----GS 56
Query: 381 FLAVFSACGSADAIEEAFIHFESMK 405
+ A+ SA + EEA F++M+
Sbjct: 57 WTALLSAFALSGHHEEAKTLFDTMQ 81
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 221/398 (55%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EA+EL +++ ++ + C + + K++H ++S +
Sbjct: 407 QNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVS 466
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N +I +Y + GS+ ARRVFD + R +W MI A +GLG++ + LFE+M ++
Sbjct: 467 VSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRV 526
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ T++ VFSAC A I++ ++E M +E GI P HY +V +L + G L E
Sbjct: 527 GVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTE 586
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
A +FI Q++P P W +L R+ + DL + A E ++ +DP +
Sbjct: 587 AHEFI-QRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYS 645
Query: 482 ------DPKKI----PTPPPKKRTAISILDGKSRLVEFRNPTLY---RDDEKLKA---LN 525
D +I KK T S +S++ F + RD KA
Sbjct: 646 ACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWE 705
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K++ +VPD VLHD+D E KE+ L HSE+LAIA+GLISTP +T LRI+KNLRVC D
Sbjct: 706 EIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCND 765
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK +S++V RE+IVRD RFHHF+DG CSC DYW
Sbjct: 766 CHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E A+++ D + + + +++ ++E Y K G AR VFD M +R + +W MI GY
Sbjct: 348 ETARRIMDKAVVADL--NVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGY 405
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
NG DE ++LF M + G +PN T AV SAC S
Sbjct: 406 EQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACAS 442
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 32/160 (20%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
VK ++++ +G+ + C + +KVH + ++ + + + N V+ M
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207
Query: 322 YGKCGSMTDARRVFDHMA-------------------------------DRSMDSWHLMI 350
YGKCG AR VF+ M +RS+ SW+ +I
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267
Query: 351 NGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACG 389
GY NGL D L+ F +M ++P+E T +V SAC
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACA 307
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY K G + DAR VF M +R SW +M+ G G + ++ F M GL
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ V S+C + +A S + G+S ++ + GKCG A+
Sbjct: 161 PSQFMLTNVLSSCAATEA-RGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219
Query: 436 FIEQ-KLPFEPTAEFWEALRNYARIHGDIDL 465
E+ K+ E + W A+ + G +DL
Sbjct: 220 VFERMKVRSESS---WNAMVSLYTHQGRMDL 247
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 218/428 (50%), Gaps = 33/428 (7%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPS-VADLARLCQEG-KVKEAIELMDKGVKADASCFYTLF 284
++L ++ P D V S V LAR G V+ +++ GV D +
Sbjct: 92 SRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVL 151
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C E + VH ++S L + N ++ MY K GS+ DAR VFD M R
Sbjct: 152 SSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAI 211
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+W +I GYA NG G E L ++ M + G +P+ TF+ + AC A ++ HF+SM
Sbjct: 212 TWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSM 271
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+SE GISPG +HY +V +LG+ G L EA +++ E A W+AL R H +
Sbjct: 272 QSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAA 331
Query: 465 LEDHAEELMVDLDPSKADPKKIPT---------------PPPKKRTAISILDGKSRLVEF 509
L + A ++ LDP+ A P + + + IS G S +V
Sbjct: 332 LAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVA 391
Query: 510 --------------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
R +YR E++ A +++ +VPDT + L D E +E L +H
Sbjct: 392 GVTHVFHAGDRDHQRAAEIYRKAEEMAA--RIRARGHVPDTEWALQDEAPEGREMGLAHH 449
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
ERLA+A+GL++ PA P+R+ KNLRVCGDCH AIK+++ + GRE+I+RD+ FHH KDG
Sbjct: 450 GERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDG 509
Query: 616 KCSCGDYW 623
CSCGDYW
Sbjct: 510 SCSCGDYW 517
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L + N +++ Y K + AR VFD M R + +W ++ G A G ++ + M
Sbjct: 78 LHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVA 137
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL----GLVGVLGK 426
G+ +E AV S+C + A+E +H +++S G E +L LV + K
Sbjct: 138 AGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRS------GHEPFLSVGNSLVSMYAK 191
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G L +A+ + A W AL
Sbjct: 192 TGSLRDARTVFDAM--RSRCAITWTAL 216
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 235/440 (53%), Gaps = 34/440 (7%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEA----IELMD 270
S+ + G+ L N + P D V ++ +A Q G +EA +E+
Sbjct: 314 SWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAI--IAGYAQNGLYEEAMNMLVEMKR 371
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
G + S F C + E K+VH +++ ++ N ++ MY KCG + +
Sbjct: 372 DGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDE 431
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF + + + SW+ M+ GYA +G G + L +FE M G++P+E T + V SAC
Sbjct: 432 AYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSH 491
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ +F SM ++GI+P ++HY ++ +LG+ G L EAQ I + +PFEP A W
Sbjct: 492 TGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLI-RNMPFEPDAATW 550
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PPPKKRTAISILDGKSR-- 505
AL +RIHG+++L + A E++ ++P + + + + +S + K R
Sbjct: 551 GALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQI 610
Query: 506 ---------LVEFRN------------PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
VE +N P R L+ L+ +MK YV T+ VLHD+
Sbjct: 611 GVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDV 670
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E K+ L YHSE+LA+A+G+++ P+ P+R++KNLRVC DCHNAIK +S+IVGR +IV
Sbjct: 671 EEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIV 730
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD+ R+HHF +G CSC DYW
Sbjct: 731 RDSHRYHHFSEGICSCRDYW 750
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 107/272 (39%), Gaps = 42/272 (15%)
Query: 222 GHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFY 281
G+ N L + +Q P D + ++ ++ Q+G + +A L ++ D +
Sbjct: 197 GYVKRNMLGDARQLFDQIPVRDLISWNTM--ISGYAQDGDLSQARRLFEESPVRDVFTWT 254
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
+ + A++V D Q + N +I Y + M R +F+ M
Sbjct: 255 AMVYAYVQDGMLDEARRVFDEMPQKR----EMSYNVMIAGYAQYKRMDMGRELFEEMPFP 310
Query: 342 SMDSWHLMIN-------------------------------GYADNGLGDEGLQLFEQMR 370
++ SW++MI+ GYA NGL +E + + +M+
Sbjct: 311 NIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMK 370
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G N TF SAC A+E +H + +++ G G LVG+ KCG
Sbjct: 371 RDGESLNRSTFCCALSACADIAALELGKQVHGQVVRT--GYEKGCLVGNALVGMYCKCGC 428
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ EA + Q + + + L YAR HG
Sbjct: 429 IDEAYD-VFQGVQHKDIVSWNTMLAGYAR-HG 458
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ Y + + DAR +FD M ++ + SW+ M++GY +G DE +F++M
Sbjct: 94 DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
N ++ + +A + +EEA FES IS L+G K L
Sbjct: 154 ----HKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNC-----LMGGYVKRNML 204
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+A+Q +Q +P + + YA+ GD+
Sbjct: 205 GDARQLFDQ-IPVRDLISWNTMISGYAQ-DGDL 235
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y + + AR +FD M + + SW+LM+ GYA N + LF+ M +
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMP----E 123
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ ++ A+ S + ++EA F+ M + IS + GL+ + G L EA++
Sbjct: 124 KDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS-----WNGLLAAYVRSGRLEEARR 178
Query: 436 FIEQKLPFE 444
E K +E
Sbjct: 179 LFESKSDWE 187
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A L+ + G V EA ++ D+ ++ + L E A+++ +S
Sbjct: 131 AMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRL----FESKSDW 186
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+L+ N ++ Y K + DAR++FD + R + SW+ MI+GYA +G + +LFE+
Sbjct: 187 ELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE 244
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 227/418 (54%), Gaps = 39/418 (9%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELMDK-------GVKADASCFYTLFELCGNPKWYE 294
G + L A ++ +E +EA++L + G K D S F L + C
Sbjct: 73 GRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAA 132
Query: 295 NAKKVHDYFLQSTI-RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ H + D VL +I MYGKCG++ A VFD M++R +W +I+GY
Sbjct: 133 EGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGY 192
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A +G +E L +F +M++ G +P+ + L V S C A +E+ + F + EFG+ PG
Sbjct: 193 AHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPG 252
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+HY ++ +LG+ G L EA + + +++PF+ TA W ++H D + A E +
Sbjct: 253 EKHYGCMIDLLGRSGDL-EAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKV 311
Query: 474 VDLDPSKADPKKIPTP---------PPKKRTAI-----------SILDGKSRLVEF---- 509
++L+P A + + R+A+ S ++ SR+ EF
Sbjct: 312 LELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGD 371
Query: 510 ----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
R +Y E L QM+ S YVPDT+ VL ++ +E KE+ L +HSE+LAIA+GL
Sbjct: 372 KSHPRAAEIYGLLESLT--RQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGL 429
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+STPA + LRIIKNLRVCGDCH A K +SRI GRE+ +RD++RFHHF+DG CSCGDYW
Sbjct: 430 LSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Query: 271 KGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+GV D CF CG K +H L++ + + V+ ++ MYGK G +
Sbjct: 4 EGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLD 63
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL---QPNEQTFLAVFS 386
+A RVF + + + SW +++ Y+ L E LQLF +M GL +P+ F +
Sbjct: 64 EATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQ 123
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC + A E H + + S G LG++ + GKCG+L A + +
Sbjct: 124 ACATLSAAAEGRLAHRRIQECGYDSSDGVLG-LGIINMYGKCGNLRAAHEVFD 175
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 219/384 (57%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +GV+ D +L C ++VH Y ++ + + +N ++++Y KCG
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA++VFD M +RS+ SW +I G A NGLG+E L+LF ++ + GL+P+E TF+ V
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F +F MK E+GI P EH+ +V +L + G + +A +I + +P P
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYI-RNMPVPPN 405
Query: 447 AEFWEALRNYARIHGDIDLEDHAEE--------------LMVDLDPSKA------DPKKI 486
A W L IHG ++L + A L+ +L S+ + +KI
Sbjct: 406 AVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKI 465
Query: 487 PTPPPKKRT-AISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYV 539
K+T S+++ K+R+ EF +P L + Q +K YVP T V
Sbjct: 466 MLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNV 525
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L DI++E KE AL +H+E++AIA+ L++TP TP+RI+KNLRVC DCH AIK++S++ R
Sbjct: 526 LADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFER 585
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E+IVRD RFHHFKDG CSC DYW
Sbjct: 586 EIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 290 PKWYENAKKVHDYFLQSTIRGDLVLN---------NKVIEMYGKCGSMTDARRVFDHMAD 340
P ++ K+ D L I +V N N ++ MY GS+ A +VF+ M+
Sbjct: 140 PFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSY 199
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FI 399
R +W+ +ING+A NG+ +E L L+ +M G++P+ T +++ SAC A+ +
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
H +K G+ L+ + KCG+ +AQ+ ++ E + W +L +
Sbjct: 260 HMYMVK--VGLVQNQHASNALLDLYSKCGNFRDAQKVFDEME--ERSVVSWTSLIVGLAV 315
Query: 460 HGDIDLEDHAEELMVDLDPSKADPKKI 486
+G L + A +L +L+ P +I
Sbjct: 316 NG---LGNEALKLFGELERQGLKPSEI 339
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 212/381 (55%), Gaps = 32/381 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-RGDLVLNNKVIEMYGKCGSMTD 330
G K D S F L + C + H + D VL +I MYGKCG++
Sbjct: 110 GTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRA 169
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VFD M++R +W +I+GYA +G +E L +F +M++ G +P+ + L V S C
Sbjct: 170 AHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSH 229
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A +E+ + F + EFG+ PG +HY ++ +LG+ G L EA + + +++PF+ TA W
Sbjct: 230 AGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDL-EAAEVMIRRMPFQATAMNW 288
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP---------PPKKRTAI---- 497
++H D + A E +++L+P A + + R+A+
Sbjct: 289 AIFLAACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMG 348
Query: 498 -------SILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHD 542
S ++ SR+ EF R +Y E L QM+ S YVPDT+ VL +
Sbjct: 349 LQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLT--RQMEGSGYVPDTKLVLLN 406
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+ +E KE+ L +HSE+LAIA+GL+STPA + LRIIKNLRVCGDCH A K +SRI GRE+
Sbjct: 407 VSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIF 466
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD++RFHHF+DG CSCGDYW
Sbjct: 467 MRDSQRFHHFQDGHCSCGDYW 487
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Query: 271 KGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+GV D CF CG K +H L++ + + V+ ++ MYGK G +
Sbjct: 4 EGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLD 63
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL---QPNEQTFLAVFS 386
+A RVF + + + SW +++ Y+ L E LQLF +M GL +P+ F +
Sbjct: 64 EATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQ 123
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC + A E H + + S G LG++ + GKCG+L A + +
Sbjct: 124 ACATLSAAAEGRLAHRRIQECGYDSSDGVLG-LGIINMYGKCGNLRAAHEVFD 175
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 212/372 (56%), Gaps = 33/372 (8%)
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
Y+ C + E K VH + ++S + + N +I+MY K GS+ DA++VF +
Sbjct: 310 YSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 369
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
+ + SW+ +I+GYA +GLG E LQLFEQM K +QPNE TFL+V +AC + ++E +
Sbjct: 370 QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYY 429
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
FE MK I H++ +V +LG+ G L EA +FIE+ +P +PTA W AL R+H
Sbjct: 430 FELMKKH-KIEAQVAHHVTVVDLLGRAGRLNEANKFIEE-MPIKPTAAVWGALLGACRMH 487
Query: 461 GDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISI 499
++DL +A E + +LDP + P K + KK A S
Sbjct: 488 KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSW 547
Query: 500 LDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQA 551
++ ++ + F + R EK+ ++KE YVPDT +VL ++Q+ +E
Sbjct: 548 VEIENEVHVFVANDDSHPMREEIQRMWEKISG--KIKEIGYVPDTSHVLFFMNQQDRELK 605
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
L YHSE+LA+A+ ++ TP +RI KN+R+CGDCH+A K SR++GRE+IVRD RFHH
Sbjct: 606 LQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHH 665
Query: 612 FKDGKCSCGDYW 623
F G CSC DYW
Sbjct: 666 FLHGMCSCRDYW 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Query: 265 AIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
++L++ G ++ + + + + C + + + +H + ST DLVL N ++ MY
Sbjct: 92 VLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYA 151
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCGS+ +A+ +FD M + M SW ++I+GY+ +G E L LF +M LG QPNE T +
Sbjct: 152 KCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSS 211
Query: 384 VFSACGSA 391
+ A G+
Sbjct: 212 LLKASGTG 219
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EA+ L K G + + +L + G + +++H + L+ ++
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY + M +A+ +F+ +A +++ SW+ +I G+A G G+ ++LF QM + G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQG 302
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
+P T+ +V AC S+ ++E+ ++H +KS G P Y+G L+ + K G +
Sbjct: 303 FEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKS--GGQPIA--YIGNTLIDMYAKSGSI 357
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+A++ + ++L + + + YA+ HG L A +L + +K P +I
Sbjct: 358 KDAKK-VFRRLVKQDIVSWNSIISGYAQ-HG---LGAEALQLFEQMLKAKVQPNEI 408
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 218/409 (53%), Gaps = 44/409 (10%)
Query: 253 LARLCQEGKVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
+A Q G EA+ L K V+ +A + C + + K++H+ ++
Sbjct: 266 IALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRM 325
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + V++MY KCG + A + F + +++ SW MI GY +G G E L +F
Sbjct: 326 GLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVF 385
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
MRK GL+PN TF+ V +AC A + E + +MK+EFGI PG EHY +V +LG+
Sbjct: 386 TDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGR 445
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA I++ + +P A W AL + RI+ +++L E + +LD + +
Sbjct: 446 AGCLDEAYGLIKE-MKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVL 504
Query: 482 ---------------------DPKKIPTPPPKKRTAISILDGKSRLVEFRNPT------L 514
+ I PP L GK+ L + + +
Sbjct: 505 LSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVE---LKGKTHLFYVGDKSHPQYKEI 561
Query: 515 YRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPL 574
Y EKL L ++ ++ YVP+T VLHD+D E +E L HSE+LA+A+ L+++ + +
Sbjct: 562 YAYLEKL--LERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVI 619
Query: 575 RIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IKNLRVC DCH AIKI++++ GRE+I+RD KRFHHFKDG CSCGDYW
Sbjct: 620 HVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGS--MTDARRVFDHMADRSMDSWHLMINGYADN 356
+H + + G + N +I+ Y K G + AR++FD M DR + SW+ MI YA N
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQN 272
Query: 357 GLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGIS 411
GL E L L+ +M +G ++ N T AV AC A AI+ IH M E +
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332
Query: 412 PGTEHYLGLVGVLGKCGHL---FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
GT +V + KCG + ++A Q I+ K W A+ +HG
Sbjct: 333 VGTS----VVDMYSKCGKVEMAWKAFQKIKGKNILS-----WSAMIAGYGMHG 376
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 216/386 (55%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++++ V+ + ++ C E ++H +++ + V+ N +I+MY KCG
Sbjct: 438 DMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCG 497
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ DAR VFD + + SW+ MI+GY+ +GL E L+ FE M + +P++ TF+ + S
Sbjct: 498 NIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILS 557
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +A ++ +F+SM E+ I P EHY +V +LG+ GHL +A + + + +PFEP+
Sbjct: 558 ACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHE-IPFEPS 616
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTP 489
W AL + IH D++L + + +++++P + I T
Sbjct: 617 VMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTS 676
Query: 490 PPKKRT----AISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE--------STYVPDTR 537
+K +S ++ + R+ F D KL +N M E YVPD
Sbjct: 677 MKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKL--INGMLEWLNMKARNEGYVPDFS 734
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VL D++ KEQ L HSERLA+AYGLI TP+ +PLRIIKNLR+C DCH AIK++S+IV
Sbjct: 735 SVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIV 794
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
R++I+RD RFHHF +G CSCGDYW
Sbjct: 795 QRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 114/224 (50%), Gaps = 10/224 (4%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKK 298
D V+P S +AR Q + +EAIE+ M +G V + +L + C + + +
Sbjct: 310 DDVIPWSFM-IARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQ 368
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + ++ + ++ ++N +++MY KCG M ++ ++F + + SW+ +I GY G
Sbjct: 369 IHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGN 428
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHY 417
G++ L LF+ M + +Q E T+ +V AC A+E IH S+K+ + + +
Sbjct: 429 GEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN- 487
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG++ +A+ + + + W A+ + +HG
Sbjct: 488 -ALIDMYAKCGNIKDARLVFDMLREHDQVS--WNAMISGYSVHG 528
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 261 KVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
+ EAI L + G + + F T+ +L + +W + VH + D +
Sbjct: 125 RFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGT 184
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I+ Y CG AR+VFD + + M SW M+ Y +N +E L+LF +MR +G +P
Sbjct: 185 ALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKP 244
Query: 377 NEQTFLAVFSAC 388
N TF +V AC
Sbjct: 245 NNFTFASVLKAC 256
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E +K + G K + F ++ + C + + K VH +++ +L +
Sbjct: 226 CFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGV 285
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++I++Y K G + DA +VF+ M + W MI YA + +E +++F +MR+ + P
Sbjct: 286 ELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLP 345
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N+ T ++ AC S ++ IH +K ++ + L+ + KCG + + Q
Sbjct: 346 NQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSN--ALMDMYAKCGRMENSLQ 403
Query: 436 FIEQ 439
+
Sbjct: 404 LFSE 407
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL NN ++ Y K S+ DA ++FD M DR+ S+ +I GY+ E + LF +++
Sbjct: 78 DLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ 137
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
G + N F V SA E A + F + + ++ ++G L+ CG
Sbjct: 138 GEGHELNPFVFSTVLKLLVSA---EWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCG 194
Query: 429 HLFEAQQFIE 438
+ A+Q +
Sbjct: 195 YAECARQVFD 204
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 219/384 (57%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +GV+ D +L C ++VH Y ++ + + +N ++++Y KCG
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA++VFD M +RS+ SW +I G A NGLG+E L+LF ++ + GL+P+E TF+ V
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F +F MK E+GI P EH+ +V +L + G + +A +I + +P P
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYI-RNMPVPPN 405
Query: 447 AEFWEALRNYARIHGDIDLEDHAEE--------------LMVDLDPSKA------DPKKI 486
A W L IHG ++L + A L+ +L S+ + +KI
Sbjct: 406 AVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKI 465
Query: 487 PTPPPKKRT-AISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYV 539
K+T S+++ K+R+ EF +P L + Q +K YVP T V
Sbjct: 466 MLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNV 525
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L DI++E KE AL +H+E++AIA+ L++TP TP+RI+KNLRVC DCH AIK++S++ R
Sbjct: 526 LADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFER 585
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E+IVRD RFHHFKDG CSC DYW
Sbjct: 586 EIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 290 PKWYENAKKVHDYFLQSTIRGDLVLN---------NKVIEMYGKCGSMTDARRVFDHMAD 340
P ++ K+ D L I +V N N ++ MY G A +VF+ M+
Sbjct: 140 PFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSY 199
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FI 399
R +W+ +ING+A NG+ +E L L+ +M G++P+ T +++ SAC A+ +
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
H +K G+ L+ + KCG+ +AQ+ ++ E + W +L +
Sbjct: 260 HMYMVK--VGLVQNQHASNALLDLYSKCGNFRDAQKVFDEME--ERSVVSWTSLIVGLAV 315
Query: 460 HGDIDLEDHAEELMVDLDPSKADPKKI 486
+G L + A +L +L+ P +I
Sbjct: 316 NG---LGNEALKLFGELERQGLKPSEI 339
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 221/400 (55%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFEL------CGNPKWYENAKKVHDYFLQSTIRGD 311
Q G +A+EL+ + + D F + C + K++H Y L++
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV 511
Query: 312 -LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L ++N +I+MY KCG + DAR VFD+M +++ +W ++ GY +G G+E L +FE+MR
Sbjct: 512 PLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR 571
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++G + + T L V AC + I++ +F MK++FG+SPG EHY LV +LG+ G L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRL 631
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---------- 480
A + IE+ +P EP W AL + RIHG ++L ++A + + +L +
Sbjct: 632 NAALRLIEE-MPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNM 690
Query: 481 -------ADPKKIPT----PPPKKRTAISILDGKSRLVEF--RNPTLYRDDEKLKALN-- 525
D +I + KKR S ++G F + T E + L+
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDH 750
Query: 526 --QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
++K+ YVP+T + LHD+D E K+ L HSE+LA+AYG+++TP +RI KNLRVC
Sbjct: 751 MQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVC 810
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH A MSRI+ E+I+RD+ RFHHFK+G CSC YW
Sbjct: 811 GDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 53/297 (17%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVAD-LARLCQEGKVKEAIELMDK-----GVKADASCF 280
L++ ++ P D V S+ + A+L GK K A+E+ K G + D
Sbjct: 176 GSLSDARKVFDEMPVWDVVSWNSIIESYAKL---GKPKMALEMFSKMTNEFGFRPDDITL 232
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+ C + K+ H + + S + ++ + N +++MY K G M +A VF +M
Sbjct: 233 VNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPV 292
Query: 341 RSMDSWHLM-----------------------------------INGYADNGLGDEGLQL 365
+ + SW+ M I+GYA GLG E L +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP---GTEHYL--G 419
QM G++PNE T ++V S C S A+ IH ++K + G E+ +
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQ 412
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
L+ + KC + A+ + P E W + HGD + A EL+ ++
Sbjct: 413 LIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD---ANKALELLSEM 466
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +F+ CG H + ++ + N ++ MY +CGS++DAR+VFD M
Sbjct: 130 FPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP 189
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSA 391
+ SW+ +I YA G L++F +M + G +P++ T + V C S
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHL 348
K K +H L I L L + +I Y G ++ A + +D + W+
Sbjct: 39 KTISQVKLIHQKLLSFGIL-TLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
+I Y +NG ++ L F M L P+ TF VF ACG ++ S
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCG-------DSSH 150
Query: 409 GISPGTEH----YLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
+S T ++G LV + +CG L +A++ ++ +P + + +YA++
Sbjct: 151 ALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDE-MPVWDVVSWNSIIESYAKL 206
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 205/359 (57%), Gaps = 33/359 (9%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGY 353
+ K++H ++S + ++N +I MY K G++T A R FD + +R SW MI
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A +G +E L+LFE M GL+P+ T++ VFSAC A + + +F+ MK I P
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
HY +V + G+ G L EAQ+FIE K+P EP W +L + R+H +IDL A E +
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIE-KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 609
Query: 474 VDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF--- 509
+ L+P + K + KK S ++ K ++ F
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 669
Query: 510 -----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
+Y +K+ +++K+ YVPDT VLHD+++E KEQ L +HSE+LAIA+G
Sbjct: 670 DGTHPEKNEIYMTMKKI--WDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFG 727
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LISTP +T LRI+KNLRVC DCH AIK +S++VGRE+IVRD RFHHFKDG CSC DYW
Sbjct: 728 LISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 42/218 (19%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E KKVH + ++ +RG++ ++N ++ MY KCG A+ VFD M R + SW+ MI +
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 354 ADNGLGDEGLQLFEQM--------------------------------RKLGLQPNEQTF 381
G D + FEQM R L P+ T
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 382 LAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
+V SAC + + + IH + + F IS + L+ + +CG + A++ IEQ+
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN--ALISMYSRCGGVETARRLIEQR 340
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLED--HAEELMVDL 476
+ E + AL + G I L D A+ + V L
Sbjct: 341 GTKDLKIEGFTAL-----LDGYIKLGDMNQAKNIFVSL 373
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 33/150 (22%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L D + D ++ C N + K++H + + + ++ N +I MY +CG
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 328 MTDARR---------------------------------VFDHMADRSMDSWHLMINGYA 354
+ ARR +F + DR + +W MI GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
+G E + LF M G +PN T A+
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 282 TLFELCGN--------PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
TL ELC N A+ VH ++S + + L N ++ +Y K G AR+
Sbjct: 11 TLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+FD M R+ SW+ +++ Y+ G D + F+Q+
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 3/162 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N V+ Y K G M FD + R SW MI GY + G + +++ M K G++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P + T V ++ + +E S + G+ L+ + KCG A +
Sbjct: 144 PTQFTLTNVLASVAATRCMETG-KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA-K 201
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
F+ ++ + W A+ G +DL E M + D
Sbjct: 202 FVFDRMVVRDISS-WNAMIALHMQVGQMDLAMAQFEQMAERD 242
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 203/368 (55%), Gaps = 28/368 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ + C E K +H Y L+ + L + N +I MYG+CG + +RVFD+M +R
Sbjct: 292 VLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRD 351
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ SW+ +I+ Y +G G + +Q+FE M G P+ +F+ V AC A +EE I FE
Sbjct: 352 VVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFE 411
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
SM S++ I PG EHY +V +LG+ L EA + IE + FEP W +L RIH +
Sbjct: 412 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED-MHFEPGPTVWGSLLGSCRIHCN 470
Query: 463 IDLEDHAEELMVDLDP---------------------SKADPKKIPTPPPKKRTAISILD 501
++L + A L+ +L+P +K+ K + +K S ++
Sbjct: 471 VELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIE 530
Query: 502 GKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
K ++ F NP + L L N+MK YVP T VL+D+D+E KE+ +L H
Sbjct: 531 VKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGH 590
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LA+A+GLI+T +RI KNLR+C DCH K +S+ RE++VRD RFHHFKDG
Sbjct: 591 SEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDG 650
Query: 616 KCSCGDYW 623
CSCGDYW
Sbjct: 651 VCSCGDYW 658
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 226 PNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFE 285
N +N++ N NQ + LC+ G +K+AI L+ F L
Sbjct: 40 ANLMNDIKGNNNQL-------------IQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLIC 86
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C + VH + S D L K+I MY + GS+ AR+VFD +R++
Sbjct: 87 SCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYV 146
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
W+ + A G G E L L+ QM +G+ + T+ V AC
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKAC 189
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ K++H + L+ ++ + ++++Y K GS++ A VF M ++ SW MI +
Sbjct: 200 QKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259
Query: 354 ADNGLGDEGLQLFEQMRKLGLQ--PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGI 410
A N + + L+LF+ M PN T + V AC A+E+ IH ++ G+
Sbjct: 260 AKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR--GL 317
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + G+CG + Q+ + + + W +L + +HG
Sbjct: 318 DSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVS--WNSLISIYGMHG 366
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 217/391 (55%), Gaps = 33/391 (8%)
Query: 264 EAIELMDKGV----KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+E + K ++ L +CG + +++H ++ + +L++ N ++
Sbjct: 533 EAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALM 592
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MY KCG D+ +VFD M +R + +W+ I G A +GLG E ++++E M +G+ PNE
Sbjct: 593 SMYFKCGC-ADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEV 651
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
TF+ + +AC A ++E + F+SM ++G++P EHY +V +LG+ G + A++FI
Sbjct: 652 TFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFI-Y 710
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------------- 482
+P EP W AL +IH + ++ A E + +PS A
Sbjct: 711 DMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVE 770
Query: 483 ----PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMKEST-Y 532
K + K S + ++++ F ++ + D L+ L + T Y
Sbjct: 771 VAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGY 830
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
VPDT +VLHDID+E KE +LLYHSE+LA+AYGL+ TP P++I+KNLR+CGDCH IK
Sbjct: 831 VPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKF 890
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S + R++ +RD RFHHF++G CSCGD+W
Sbjct: 891 VSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ +EA++L+ G+ S + F C + E ++VH +++
Sbjct: 390 IAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGC 449
Query: 309 RGDLVLNNKVIEMYGKCGSM-------------------------------TDARRVFDH 337
+ + + N +I MYGKC +M DAR +FD+
Sbjct: 450 QFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDN 509
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
M R + SW +I+ YA GDE ++ F+ M +PN + S CG
Sbjct: 510 MLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCG 561
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
+ +LARL G+++EA E+ D D + ++ N E+A+ + D +R
Sbjct: 40 IRELARL---GRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+L + Y + G + DARRVFD M +R+ +W+ M++ Y NG +LF+ M
Sbjct: 97 TATIL----LSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAM 152
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+CG +T+AR +F+ + D + SW+ MI GY NG+ DE +LF++M
Sbjct: 332 ARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRM 378
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y + G + +A+ +FD M R+ SW MI GYA NG +E L L + + + G+
Sbjct: 356 NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGML 415
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
P+ + + F AC A+E S+ + G + L+ + GKC
Sbjct: 416 PSLSSLTSSFLACSHIGALETGR-QVHSLAVKAGCQFNSYVCNALISMYGKC 466
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 214 NSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQV-LPPSVADLARLCQEGKVKEAIELMD-K 271
S+ + G+ Q+ + N Q P + V ++ R+ Q GK + +M +
Sbjct: 158 TSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHE 217
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD- 330
G D S F ++ + + + L++ D+V+ ++ +Y + S D
Sbjct: 218 GASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDI 277
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ--MRKLGLQPNEQTFLAVFSAC 388
A + FD M +R+ +W MI + G D + ++ + ++ + P++ L + C
Sbjct: 278 AIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI---PSQTALLTGLARC 334
Query: 389 GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
G I EA I FE + +S + ++ + G + EA++ + ++PF T
Sbjct: 335 GR---ITEARILFEQIPDPIVVS-----WNAMITGYMQNGMVDEAKELFD-RMPFRNTIS 385
Query: 449 FWEALRNYA 457
+ + YA
Sbjct: 386 WAGMIAGYA 394
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ N ++ Y M DA +F M R++ +W +MI+GY +G +F M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 371 KLGLQPNEQTFLAVFSA 387
G P++ F +V SA
Sbjct: 216 HEGASPDQSNFASVLSA 232
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 203/368 (55%), Gaps = 28/368 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ + C E K +H Y L+ + L + N +I MYG+CG + +RVFD+M R
Sbjct: 292 MLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRD 351
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ SW+ +I+ Y +G G + +Q+FE M G+ P+ +F+ V AC A +EE I FE
Sbjct: 352 VVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFE 411
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
SM S++ I PG EHY +V +LG+ L EA + IE + FEP W +L RIH +
Sbjct: 412 SMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIED-MHFEPGPTVWGSLLGSCRIHCN 470
Query: 463 IDLEDHAEELMVDLDP---------------------SKADPKKIPTPPPKKRTAISILD 501
++L + A ++ +L+P +K+ K + +K S ++
Sbjct: 471 VELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIE 530
Query: 502 GKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
K ++ F NP + L L N+MK YVP T VL+D+D+E KE+ +L H
Sbjct: 531 VKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGH 590
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LA+A+GLI+T +RI KNLR+C DCH K +S+ RE++VRD RFHHF+DG
Sbjct: 591 SEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDG 650
Query: 616 KCSCGDYW 623
CSCGDYW
Sbjct: 651 VCSCGDYW 658
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ ++P + N +N+ N + Q LC+ G +K+A+ L+
Sbjct: 32 SFVSLNPSANLINDINSNNNQLIQ----------------SLCKGGNLKQALHLLCCEPN 75
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
F L C VH + S D L K+I MY + GS+ A +V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
FD +R++ W+ + A G G E L L+ QM +G + T+ V AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKAC 189
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + L+ ++ + ++++Y K GS++ A VF M ++ SW MI +A
Sbjct: 202 GKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAK 261
Query: 356 NGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF-GIS 411
N + + L+LF+ M PN T + + AC A+E+ IH ++ + I
Sbjct: 262 NEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSIL 321
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
P L+ + G+CG + Q+ + + + W +L + +HG
Sbjct: 322 PVLN---ALITMYGRCGEVLMGQRVFDNMKKRDVVS--WNSLISIYGMHG 366
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 216/402 (53%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK EA+E +G + ++ + N + + H + L+
Sbjct: 265 VACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGF 324
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ +++ +++MY KCG + DAR +FD M R++ SW+ MI GYA G + +F
Sbjct: 325 LHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHS 384
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M K +P+ TF + +AC A EE +F+ M +E+G+SP EHY +V +LG+ G
Sbjct: 385 MLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAG 444
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------ 482
L EA I +PFEP A W +L R+HG++DL + A E + L+P A
Sbjct: 445 KLDEAYDLISD-MPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLS 503
Query: 483 ----PKKIPTPPPKKRTAISILDGKSR----LVEFRNPT---LYRDD---------EKLK 522
KK+ + R + + K +E +N L DD EK+
Sbjct: 504 NIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKIN 563
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
LN QM++ +VP T +VLHD++++ K+ L HSE+LA+A GLIST T LR+IKNLR
Sbjct: 564 QLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLR 623
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH A+K +S GRE+ VRD RFHHF GKCSCGD+W
Sbjct: 624 ICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
++ DA+ G+ +++H Y +++ R D + +I+MYGKCG +
Sbjct: 153 LRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVV 212
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVFD + + S + +I G + N E L+LF++ G++ N ++ ++ + C
Sbjct: 213 RVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNG 272
Query: 393 AIEEAFIHFESMKSEFGISPGTE 415
EA F M+++ GTE
Sbjct: 273 KDLEAVEFFREMQAQ-----GTE 290
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 215/390 (55%), Gaps = 28/390 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E +K E+ + GV D F N E +++H ++ DL + N
Sbjct: 682 CGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTN 741
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++MYGKCG M D ++ +RS SW+++I+ +A +G + + F +M KLG +P
Sbjct: 742 AAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKP 801
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+++ SAC ++E +++SM EFG+ PG EH + ++ +LG+ G L A+ F
Sbjct: 802 DHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 861
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------- 483
I++ +P P W +L RIHG+++L E +++LDPS
Sbjct: 862 IKE-MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 920
Query: 484 --------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQM-KE 529
K++ + KK+ A S + K ++ F +P R KL L +M KE
Sbjct: 921 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 980
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVPDT + LHD+D+E KE L HSERLA+A+GLI+TP + LRI KNLRVCGDCH+
Sbjct: 981 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1040
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
K +S IVGR++++RD RFHHF GKCSC
Sbjct: 1041 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H + + ++ + N +I MY K G++ AR VFD M R+ SW M++GY
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
GL +E + LF QM LG++PN ++ +AC + + + + GI
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
LV G G ++ AQ+ E+
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEE 256
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 234 NNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWY 293
N+M C D + LA L Q GKV + F + C NP+
Sbjct: 468 NSMMACYVQDGKCLDGLKILAELLQMGKVMNHVT------------FASALAACSNPECL 515
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+K VH + + L++ N ++ MYGK G M +A++V M +W+ +I G+
Sbjct: 516 IESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGH 575
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
A+N +E ++ ++ +R+ G+ N T ++V AC + D
Sbjct: 576 AENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPD 614
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 125/309 (40%), Gaps = 35/309 (11%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPK-WYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
VK + +KG+ A+ ++ C P ++ +H + + + D + N +I
Sbjct: 585 VKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLIT 644
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG + + +FD + ++S +W+ M+ A +G G+E L++F +MR +G+ ++ +
Sbjct: 645 MYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 704
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
F +A + +EE + + G + + GKCG + + + + Q
Sbjct: 705 FSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ- 762
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISIL 500
P + W L + HG M+ L P P T +S+L
Sbjct: 763 -PINRSRLSWNILISAFARHGCFQKARETFHEMLKLG-----------PKPDHVTFVSLL 810
Query: 501 DGKSR--LVEFRNPTLYRDDEKLKALNQM-KESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
+ LV DE L + M +E P + + ID LL S
Sbjct: 811 SACNHGGLV----------DEGLAYYDSMTREFGVFPGIEHCVCIID-------LLGRSG 853
Query: 558 RLAIAYGLI 566
RL+ A G I
Sbjct: 854 RLSHAEGFI 862
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWY-ENAKKVHDYFLQST 307
L+ + G +EA+ L + GV+ + +L C + + +VH + +++
Sbjct: 167 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 226
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
I GD+ + ++ YG G + +A+++F+ M D ++ SW ++ GY+D+G E L +++
Sbjct: 227 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 286
Query: 368 QMRKLGLQPNEQTFLAVFSACG 389
+MR+ G+ N+ TF V S+CG
Sbjct: 287 RMRQEGVSGNQNTFATVTSSCG 308
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
N KW + +H ++ + ++ + N ++ +Y + G DA VF M +R + SW+
Sbjct: 413 NLKW---GRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNS 469
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA-IEEAFIHFESMKSE 407
M+ Y +G +GL++ ++ ++G N TF + +AC + + IE +H
Sbjct: 470 MMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH------A 523
Query: 408 FGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
I G +L LV + GK G + EA++ + Q +P +P W AL
Sbjct: 524 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL-QTMP-QPDRVTWNAL 571
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV + + F T+ CG + +V + +Q + + N +I M+ S+ +
Sbjct: 291 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 350
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
A VFDHM + + SW+ MI+ YA +GL E L+ F MR L + N T
Sbjct: 351 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 223/397 (56%), Gaps = 31/397 (7%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEAI L D+ GV+ D++ F ++ C + + VH+Y + + + ++V
Sbjct: 189 QNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVV 248
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I MY +CG+++ AR VFD M +R++ +W MI+GY NG G + ++LF +MR+ G
Sbjct: 249 LGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNG 308
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L PN TF+AV SAC A + E F S++ E+ + PG EH + LV +LG+ G L EA
Sbjct: 309 LFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEA 368
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
FI++++P P A+ ++H + DL E ++ +P
Sbjct: 369 YNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYAL 428
Query: 479 -SKADPKKIP-----TPPPKKRTAISI--LDGKSRLVEFRNPTLYRDDEKLKALNQM--- 527
+ D +I KK+ S +D K+ L + + + L+++
Sbjct: 429 AGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWK 488
Query: 528 -KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
E+ YVP + V+H++++E +E AL YHSE+LAIA+GL+ T TP+RI+KNLR+C DC
Sbjct: 489 CSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDC 548
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK +S I RE+IVRD RFHHFK G CSC DYW
Sbjct: 549 HSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + ++ + VH + L D+ + ++ +YGKCG + +AR+VFD +
Sbjct: 114 FTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIR 173
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
+RS+ +W+ MI+GY NG E + LF++M++ G++P+ TF++V SAC A
Sbjct: 174 ERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCW 233
Query: 400 HFESMKS---EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
E + + + GT L+ + +CG++ +A++ +
Sbjct: 234 VHEYIVGNGLDLNVVLGTS----LINMYIRCGNVSKAREVFDS 272
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 206/359 (57%), Gaps = 33/359 (9%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGY 353
+ K++H ++S + ++N +I MY K GS+T A R FD + +R SW MI
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A +G +E L+LFE M GL+P+ T++ VFSAC A + + +F+ MK I P
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
HY +V + G+ G L EAQ+FIE K+P EP W +L + R++ +IDL A E +
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIE-KMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERL 609
Query: 474 VDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF--- 509
+ L+P + K + KK S ++ K ++ F
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVE 669
Query: 510 -----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
+ +Y +K+ +++K+ YVPDT VLHD+++E KEQ L +HSE+LAIA+G
Sbjct: 670 DGIHPQKNEIYITMKKI--WDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFG 727
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LISTP +T LRI+KNLRVC DCH AIK +S++VGRE+IVRD RFHHFKDG CSC DYW
Sbjct: 728 LISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 42/238 (17%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+M +G++ + + E KKVH + ++ +RG++ ++N ++ MY KCG
Sbjct: 136 EMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 327 SMTDARRVFD-------------------------------HMADRSMDSWHLMINGYAD 355
A+ VFD MA+R + +W+ MI+GY
Sbjct: 196 DPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQ 255
Query: 356 NGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSAD--AIEEAFIHFESMKSEFGISP 412
G L +F +M R L P+ T +V SAC + + I E IH + + F IS
Sbjct: 256 RGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQ-IHSHIVTTGFDISG 314
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
+ L+ + +CG + A++ IEQ+ + E + AL + G I L D E
Sbjct: 315 IVLN--ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL-----LDGYIKLGDMNE 365
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 34/173 (19%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L D + D ++ C N + +++H + + + ++ N +I MY +CG
Sbjct: 270 LRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 328 MTDARR---------------------------------VFDHMADRSMDSWHLMINGYA 354
+ ARR +FD + DR + +W MI GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYE 389
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
+GL E + LF M +PN T A+ S S ++ IH ++KS
Sbjct: 390 QHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS 442
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 282 TLFELCGN--------PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
TL ELC N A+ VH ++S + + L N ++ +Y K G AR+
Sbjct: 11 TLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARK 70
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+FD M R+ SW+ +++ YA G D + F+++
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRL 106
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N V+ Y K G M + FD + R SW MI GY + G + +++ +M + G++
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ T V ++ + +E S + G+ L+ + KCG A+
Sbjct: 144 PSQFTLTNVLASVAATRCLETG-KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
++ + + ++ W A+ G +DL E M + D
Sbjct: 203 VFDRMVVKDISS--WNAMIALHMQVGQMDLAMAQFEQMAERD 242
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 207/380 (54%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ D F TL + C E +++H ++ D + +++MY KCG++ DAR
Sbjct: 1206 VQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1265
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F + SW+ MI G A +G +E LQ FE+M+ G+ P+ TF+ V SAC +
Sbjct: 1266 GLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSG 1325
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ EA+ +F SM+ +GI P EHY LV L + G + EA++ I +PFE +A +
Sbjct: 1326 LVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISS-MPFEASASMYRT 1384
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---------------------PPP 491
L N R+ D + E ++ L+PS + + +
Sbjct: 1385 LLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANV 1444
Query: 492 KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
KK S +D K+++ F +Y E + + +++E Y+PDT + L D+
Sbjct: 1445 KKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYI--MKRIREEGYLPDTDFALVDV 1502
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E KE +L YHSE+LAIAYGL+ TP T LR+IKNLRVCGDCHNAIK +S++ RE+++
Sbjct: 1503 EEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVL 1562
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF+ G CSCGDYW
Sbjct: 1563 RDANRFHHFRSGVCSCGDYW 1582
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ Q G+ EA++ +++ V D F + + E K++H ++S +
Sbjct: 878 LSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGL 937
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N +I MY K GS++ AR VF M + + SW+ MI+G A +GL + + +F
Sbjct: 938 DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVD 997
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + GL P++ T +V AC S + + G+ + L+ V K G
Sbjct: 998 LLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSG 1057
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+ EA+ + F+ + W A+ + + GD
Sbjct: 1058 KMEEAEFLFVNQDGFDLAS--WNAMMHGYIVSGDF 1090
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I + + G +A+ + G + K++ ++ DL + + V++MY KC
Sbjct: 1098 ILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKC 1157
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G M ARR+F+ + +W MI+G +NG + L + MR +QP+E TF +
Sbjct: 1158 GEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC A+E+ IH ++K P LV + KCG++ +A+ ++
Sbjct: 1218 KACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKR 1270
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+F++C A+ +H Y ++ ++ D+ + ++ +Y K G + +AR +FD M R
Sbjct: 733 VFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRD 792
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
+ W++M+ Y D GL E L LF + + GL+P++ T
Sbjct: 793 VVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL 831
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGY 353
K+ H L S D L N +I MY KCGS++ AR++FD D S D +W+ +++ +
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGI 410
AD +G LF +R+ + T VF C S A E +H ++K G+
Sbjct: 705 ADK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES--LHGYAVK--IGL 758
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
LV + K G + EA+ +
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFD 786
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGN-PKWYENAKKVHDYFLQSTIRGDLVLNN 316
+E V ++L+ G+ D ++ C + A ++H +++ + D ++
Sbjct: 988 EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVST 1047
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I++Y K G M +A +F + + SW+ M++GY +G + L+L+ M++ G +
Sbjct: 1048 TLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERA 1107
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N+ T A G +++ +++ + G + G++ + KCG + A++
Sbjct: 1108 NQITLANAAKAAGGLVGLKQG-KQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166
Query: 437 IEQ 439
+
Sbjct: 1167 FNE 1169
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 222/396 (56%), Gaps = 32/396 (8%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + +E+ + + S F C N E +++H +++ + + N
Sbjct: 160 CSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGN 219
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCGS+ +AR F + ++ + SW+ MI+GYA +G G+E L +FE M+ G++P
Sbjct: 220 ALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRP 279
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
++ T ++V +AC A +++ +F SM ++GI+ HY +V +LG+ G L EAQ
Sbjct: 280 DDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNL 339
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------------ 478
+ + +PFEP A W AL +RIHG+ +L + A +++ +++P
Sbjct: 340 M-KNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGR 398
Query: 479 -SKADPKKIPT--PPPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKALNQM 527
S A ++ KK S L+ ++++ F+ +Y E++ ++
Sbjct: 399 WSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDL--KL 456
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
K+ Y+ T V HD+++E K L YHSE+LA+AYG++ PA P+R+IKNLRVC DCH
Sbjct: 457 KQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCH 516
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NAIK +S+IVGR +I+RDN RFH+F+ G CSC D+W
Sbjct: 517 NAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + R +FD+M R SW MI GY+ NG +E L F +M++ + N +F
Sbjct: 128 GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCAL 187
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
S C + A+E +H +K+ + T Y+G L+ + KCG + EA+ ++ L
Sbjct: 188 STCSNIAALELGRQLHCRLVKAGY----QTGWYVGNALLAMYCKCGSIDEARDAFQEIL- 242
Query: 443 FEPTAEFWEAL-RNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
E W + YAR HG EE + + K + P T +S+L
Sbjct: 243 -EKDVVSWNTMIHGYAR-HG------FGEEALTVFELMKTTGIR-----PDDATMVSVLA 289
Query: 502 GKS 504
S
Sbjct: 290 ACS 292
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM- 369
DL N ++ Y + + AR +F+ M +R + SW+ M++GYA NG DE ++F +M
Sbjct: 25 DLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP 84
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
K G+ N LA + G IE+A FES
Sbjct: 85 LKNGISWN--GLLAAYVQNGR---IEDAKRLFES 113
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR +FD M +R + SW++M+ GY N LFE+M + + ++ A+ S
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMP----ERDIVSWNAMLSGYAQ 69
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++EA F M + GIS + GL+ + G + +A++ E K+ + + W
Sbjct: 70 NGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAKRLFESKMDWTLVS--W 122
Query: 451 EAL 453
L
Sbjct: 123 NCL 125
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 207/380 (54%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ D F TL + C E +++H ++ D + +++MY KCG++ DAR
Sbjct: 1235 VQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1294
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F R + SW+ MI G A +G E LQ F+ M+ G+ P+ TF+ V SAC +
Sbjct: 1295 GLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSG 1354
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ EA+ +F SM+ +GI P EHY LV L + G + EA++ I +PFE +A +
Sbjct: 1355 LVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVI-SSMPFEASASMYRT 1413
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP---------------------P 491
L N R+ D + E ++ L+PS + + +
Sbjct: 1414 LLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNV 1473
Query: 492 KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
KK S +D K+++ F +Y E + + +++E YVPDT + L D+
Sbjct: 1474 KKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYI--MKRIREEGYVPDTDFALVDV 1531
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E KE +L YHSE+LAIAYGL+ TP T LR+IKNLRVCGDCH+AIK +S++ RE+++
Sbjct: 1532 EEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVL 1591
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF++G CSCGDYW
Sbjct: 1592 RDANRFHHFRNGICSCGDYW 1611
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I + + G ++D + G + K++H ++ DL + + V++MY KC
Sbjct: 1127 ILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKC 1186
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G M ARRVF + +W MI+G +NG + L + QMR +QP+E TF +
Sbjct: 1187 GEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC A+E+ IH +K P LV + KCG++ +A+ ++
Sbjct: 1247 KACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKR 1299
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+R Q G+ EA++ +++ V D F + + E K++H ++S +
Sbjct: 907 LSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGL 966
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N +I MY K GS++ AR VF M + + SW+ MI+G +GL + + +F
Sbjct: 967 DQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVH 1026
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-----IHFESMKSEFGISPGTEHYLGLVGV 423
+ + L P++ T +V AC S +E + IH +MK+ G+ + L+ V
Sbjct: 1027 LLRDSLLPDQFTVASVLRACSS---LEGGYYLATQIHACAMKA--GVVLDSFVSTALIDV 1081
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
K G + EA+ + F+ + W A+ + + GD
Sbjct: 1082 YSKRGKMEEAEFLFVNQDGFDLAS--WNAIMHGYIVSGDF 1119
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+F++C ++ +H Y ++ ++ D+ + ++ +Y K G + +AR +FD MA R
Sbjct: 766 VFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRD 825
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
+ W++M+ Y D L E + LF + + G +P++ T
Sbjct: 826 VVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD--RSMDSWHLMINGYA 354
K+ H L S D + N +I MY KCGS++ AR++FD D R + +W+ +++ A
Sbjct: 676 KRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALA 735
Query: 355 DNG-LGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +G LF +R+ + T VF C
Sbjct: 736 AHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMC 770
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNN 316
+E V + L+ + D ++ C + + Y A ++H +++ + D ++
Sbjct: 1017 EECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVST 1076
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I++Y K G M +A +F + + SW+ +++GY +G + L+L+ M++ G +
Sbjct: 1077 ALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERS 1136
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
++ T + A G +++ IH +K F + G++ + KCG + A++
Sbjct: 1137 DQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTS--GVLDMYLKCGEMESARR 1194
Query: 436 FIEQ 439
+
Sbjct: 1195 VFSE 1198
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 210/385 (54%), Gaps = 28/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ +G K DA F ++ C + E KK+H + L S + D+ + ++ MY K
Sbjct: 320 LQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKS 379
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GS+ DAR VFD M R++ SW+ MI+G A +GLG + L++F +M G++P+ TF+AV
Sbjct: 380 GSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVL 439
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A ++E + +M +GI P H +V +LG+ G L EA+ FI+ + +P
Sbjct: 440 SACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN-MAVDP 498
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PPPKKRTAISILDG 502
W AL R +G+++L + + + LDP A + + K +S +
Sbjct: 499 DEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRT 558
Query: 503 KSR-----------LVEFRNPT---LYRD----------DEKLKALNQMKESTYVPDTRY 538
R +E N L D + K K + ++K Y+PDTR
Sbjct: 559 MMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRL 618
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL + + + KE + HSE+LAI YGL+ TP P+R+ KNLRVC DCH A K++S++ G
Sbjct: 619 VLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEG 678
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFKDG CSCGDYW
Sbjct: 679 REIIVRDANRFHHFKDGVCSCGDYW 703
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA LM +G K +A + ++ C + + K+VH + L + + D+
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY K GS+ DAR VFD M R + SW++MI +A++G G E LF QM+ G
Sbjct: 267 VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG 326
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHL 430
+P+ FL++ +AC SA A+E IH ++ S E + GT LV + K G +
Sbjct: 327 CKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT----ALVHMYSKSGSI 382
Query: 431 FEAQQFIEQ 439
+A+ ++
Sbjct: 383 DDARVVFDR 391
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +GV+ +A + + + C + + K+VH + D+ + ++ MYGKCG
Sbjct: 119 EMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCG 178
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ +ARR+FD++ + + SW +MI YA +G G E +L QM + G +PN T++++ +
Sbjct: 179 SINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILN 238
Query: 387 ACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC S A++ +H ++ + E + GT LV + K G + +A+ ++
Sbjct: 239 ACASEGALKWVKRVHRHALDAGLELDVRVGT----ALVQMYAKSGSIDDARVVFDR 290
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 95/175 (54%), Gaps = 11/175 (6%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSM 328
+ +G+ D+ + + + C K AK+VHD ++S + + + N ++ +Y +CG +
Sbjct: 20 LQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRL 79
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+AR VFD + +S SW+ MI GY ++ ++ ++LF +M G+QPN T++ + AC
Sbjct: 80 QEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKAC 139
Query: 389 GSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
S A++ A I ++S+ + GT L+ + GKCG + EA++ +
Sbjct: 140 ASLSALKWGKEVHACIRHGGLESD--VRVGT----ALLRMYGKCGSINEARRIFD 188
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 213/381 (55%), Gaps = 33/381 (8%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV+ ++ +CG+ ++ ++VH ++S D+ +++ +I MY KCG +
Sbjct: 191 EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVT 250
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A+RVFD + + + W+ +I GYA +G G++ L++F M + P+E TF+ V SAC
Sbjct: 251 AKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSY 310
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++E FESMKS++ + P TEHY +V +LG+ G L EA IE +P E A W
Sbjct: 311 TGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN-MPVEADAIVW 369
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
AL R H ++DL + A + ++ L+P+ A P K +
Sbjct: 370 GALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAK 429
Query: 490 PPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKALNQMKESTYVPDTRYVL 540
+K S ++ ++ F + + + KL AL ++E+ Y PD +V+
Sbjct: 430 NLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGAL--LREAGYCPDGSFVM 487
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
HD+D+E K +L HSE+LA+AYGL+ P P+R++KNLRVCGD H+ IK+++++ GRE
Sbjct: 488 HDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGRE 547
Query: 601 LIVRDNKRFHHFKDGKCSCGD 621
+I+RD RFHHFKDG CSC D
Sbjct: 548 IILRDTNRFHHFKDGLCSCSD 568
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD---------- 360
D+V + +I+ G + +AR +FD M R++ +W MI+G D+G
Sbjct: 117 DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG 176
Query: 361 ---EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH 416
E L LF M++ G++P+ + ++V S CGS +++ +H + ++S+F I
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSS 236
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQ 439
L+ + KCG L A++ ++
Sbjct: 237 V--LITMYIKCGDLVTAKRVFDR 257
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
N ++ Y + G +++AR+VFD M +R++ SW MI GY GL +E LF +M
Sbjct: 29 NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRM 82
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+AR++FD M + + SW+ +++GY NG+ E ++F++M + N ++ A+
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMP----ERNVVSWTAMIRGYV 67
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
IEEA + F M +S + ++G L + G + EA+Q +
Sbjct: 68 QEGLIEEAELLFWRMPERNVVS-----WTVMLGGLIEDGRVDEARQLFDM 112
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 220/405 (54%), Gaps = 45/405 (11%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFEL------CGNPKWYENAKKVHDYFLQSTIRGD 311
Q G +A+EL+ + + D F + C + K++H Y L++
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 312 -LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L ++N +I+MY KCGS++DAR VFD+M ++ +W ++ GY +G G+E L +F++MR
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++G + + T L V AC + I++ +F MK+ FG+SPG EHY LV +LG+ G L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----DPSKA----- 481
A + IE+ +P EP W A + RIHG ++L ++A E + +L D S
Sbjct: 632 NAALRLIEE-MPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 482 --------DPKKIPT----PPPKKRTAISILDGKSRLVEFRNPTLYRDDEK--------- 520
D +I + KKR S ++G T + D+
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIK-----GTTTFFVGDKTHPHAKEIYQ 745
Query: 521 --LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
L + ++K+ YVP+T + LHD+D E K+ L HSE+LA+AYG+++TP +RI K
Sbjct: 746 VLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK 805
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH A MSRI+ ++I+RD+ RFHHFK+G CSC YW
Sbjct: 806 NLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 49/263 (18%)
Query: 260 GKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
GK K A+E+ + G + D + C + + K++H + + S + ++ +
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLM------------------------- 349
N +++MY KCG M +A VF +M+ + + SW+ M
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 350 ----------INGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
I+GYA GLG E L + QM G++PNE T ++V S C S A+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 399 IHFESMKSEFGISP---GTEHYL--GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
IH ++K + G E+ + L+ + KC + A+ + P E W +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 454 RNYARIHGDIDLEDHAEELMVDL 476
HGD + A EL+ ++
Sbjct: 447 IGGYSQHGD---ANKALELLSEM 466
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +F+ CG + H L + ++ + N ++ MY +C S++DAR+VFD M+
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGS 390
+ SW+ +I YA G L++F +M + G +P+ T + V C S
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHL 348
K K +H L I L L + +I Y G ++ A + +D + W+
Sbjct: 39 KTISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMK 405
+I Y DNG ++ L LF M L P+ TF VF ACG ++ E A H S+
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA--HALSLV 155
Query: 406 SEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA-LRNYARI 459
+ F + ++G LV + +C L +A++ ++ ++ + W + + +YA++
Sbjct: 156 TGF----ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS--WNSIIESYAKL 206
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 227/404 (56%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA +E+ G + + F C + E K++H ++
Sbjct: 364 AIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKM 423
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ N ++ MY KCGS+ +A F+ + ++ + SW+ M+ GYA +G G + L +F
Sbjct: 424 GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E M+ G++P+E T + V SAC ++ +F SM ++G+ P ++HY ++ +LG+
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EAQ I + +PF+P A W AL +RIHG+ +L + A E++ ++P +
Sbjct: 544 AGRLEEAQDLI-RNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 602
Query: 482 ------------DPKKIPTP----PPKKRTAISILDGKSRLVEFR-----NPTLYRDDEK 520
D K+ + +K S ++ ++++ F +P R
Sbjct: 603 LSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAY 662
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L+ L+ +M+E YV T+ VLHD+++E KE L YHSE+LA+A+G+++ P P+R++KN
Sbjct: 663 LEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKN 722
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH+AIK +S+IVGR +I+RD+ RFHHF +G CSCGDYW
Sbjct: 723 LRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I YG+ G + AR+ FD M R SW +I GYA +G +E L +F ++++ G
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
N TF S C A+E IH +++K + GT ++G L+ + KCG + E
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGY----GTGCFVGNALLAMYFKCGSIDE 447
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A E + + + L YAR HG
Sbjct: 448 ANDTFE-GIEEKDVVSWNTMLAGYAR-HG 474
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA G+++EA L + D + L K +A+ + D + +R D
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD---KMPVR-DA 235
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ N +I Y + G ++ ARR+FD R + +W M++GY NG+ DE F++M
Sbjct: 236 ISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP-- 293
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ NE ++ A+ + ++ A FESM S T ++ G+ G + +
Sbjct: 294 --EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNT-----MITGYGQIGDIAQ 346
Query: 433 AQQFIEQ 439
A++F +
Sbjct: 347 ARKFFDM 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ Y + + DARR+FD M ++ + SW+ +++GYA NG DE ++F+ M
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP 169
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
+ N ++ + +A IEEA + FES
Sbjct: 170 ----EKNSISWNGLLAAYVHNGRIEEACLLFES 198
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 216/400 (54%), Gaps = 39/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ L + G+ + ++ +CG+ E K++H +++
Sbjct: 233 QLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGF 292
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I +Y KCG + A RVFD + +++ W+ M+ A + E LF +M G
Sbjct: 293 VGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAG 352
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TFL V AC A +EE +F MK ++ I PGT+HY +V +LG+ G L EA
Sbjct: 353 MRPNFITFLCVLYACSHAGLVEEGKKYFALMK-KYEIEPGTQHYASMVDLLGRAGKLQEA 411
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------- 476
I + +P EPT W A RIHG+ DL A + + +L
Sbjct: 412 LSVI-KGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAA 470
Query: 477 -----DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D +KA K + KK T +S ++ +R+ +F R +Y+ E L
Sbjct: 471 AGRYEDAAKAR-KMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLG- 528
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+M+ + YV DT +VL ++ E K Q + YHSERLAIA+GLIS P P+RI+KNLRVC
Sbjct: 529 -EEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVC 587
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCHNAIK +S++ GR +IVRDN RFH F+DGKCSC DYW
Sbjct: 588 GDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K VH +++ D+ + + +++MY KCG + +AR VFD M R++ SW MI GY
Sbjct: 174 GKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQ 233
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
G +E ++LF++ GL N+ T +V CGSA +E IH K+ + +S
Sbjct: 234 LGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSG-- 291
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
++G L+ + KCG L E + ++P + W A+
Sbjct: 292 --FVGSSLISLYSKCG-LIEGAYRVFDEVPIKNLG-MWNAM 328
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 237/460 (51%), Gaps = 39/460 (8%)
Query: 201 WNNQQNQGYPQARNSYQQVSPGHQIPNQ---LNNVPNNMNQCPAGDQVLPPSVADLARLC 257
WN N GY Q + ++ + LN V + + L D+ R
Sbjct: 82 WNAMVN-GYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREM 140
Query: 258 QEGKVKEAIELMDKGVKADA----SCFYTLFEL--CGNPKWYENAKKVHDYFLQSTI-RG 310
Q G+ +A+EL K D +CF L C +++H Y L++
Sbjct: 141 QHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSA 200
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L + N +I+MY K G + AR VFD++ ++ SW ++ GY +G G E L++F++MR
Sbjct: 201 FLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMR 260
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++GLQP+ T L V AC + I++ F SM EFG+ PG EHY +V +LG+ G L
Sbjct: 261 RVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRL 320
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---------- 480
EA + IE + EP++ W AL + RIH +++L +HA + +++L+
Sbjct: 321 NEAMELIE-GMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNI 379
Query: 481 -ADPKK----------IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL 524
A+ ++ + +KR S + GK F +P + E L++L
Sbjct: 380 YANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSL 439
Query: 525 NQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
Q +K YVP+T + LHD+D E K L HSE+LA+AYG++ + P+RI KNLRVC
Sbjct: 440 TQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVC 499
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCHNAI +S I+ E+I+RD+ RFHHFK G CSC YW
Sbjct: 500 GDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 69/121 (57%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+L D ++ D + C + + + K VH ++S DL + N +++MY KCG
Sbjct: 3 KLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCG 62
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +A +VFD + ++ + SW+ M+NGY+ G ++ L LFE+MR+ ++ N ++ AV +
Sbjct: 63 MVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIA 122
Query: 387 A 387
A
Sbjct: 123 A 123
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 218/398 (54%), Gaps = 37/398 (9%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK EA+ L + GV+ D +L C ++ H Y ++ + +L N
Sbjct: 86 GKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHAN 145
Query: 316 NKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N ++++Y KCG++++AR++FD M +R++ SW +I G A NG G E L+ F+ M + GL
Sbjct: 146 NALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGL 205
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+E TF+ V AC + E F +F+ MK ++ I P EHY +V +LG+ G L EA
Sbjct: 206 VPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAY 265
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADP 483
+I Q +P +P A W L IHG + L A ++ L+P A
Sbjct: 266 DYI-QDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASE 324
Query: 484 KKIPTPPPKKRTAISILDGKSR-----LVEFRN---------PTLYRDDEKLKALNQM-- 527
++ +RT +S +G + LVE N T + + K L +M
Sbjct: 325 QRWSDVHEVRRTMLS--EGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAM 382
Query: 528 --KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
K + YVP T VL DI++E KE AL YHSE++AIA+ LI+T TP+RIIKNLRVC D
Sbjct: 383 KLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKNLRVCAD 442
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK++S++ R+++VRD RFHHF+DG CSC DYW
Sbjct: 443 CHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +VF+ M ++ + +W+ +ING+A NG +E L L+++M G++P+ T +++ SAC
Sbjct: 60 AYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAE 119
Query: 391 -ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A + H +K G++ L+ + KCG + EA++ ++ + E
Sbjct: 120 LATLVLGRRAHVYMVK--VGLNKNLHANNALLDLYAKCGTISEARKIFDE-MGIERNVVS 176
Query: 450 WEAL 453
W +L
Sbjct: 177 WTSL 180
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 221/394 (56%), Gaps = 36/394 (9%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+EL + + D ++ C + +VH + + I DL L +
Sbjct: 102 KEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTAL 161
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCG + A+RVFD M ++ + +W MI G A++GLG E L LF +M G++PN
Sbjct: 162 IDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNG 221
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V AC + E +F SM GI P EHY +V +LG+ GH+ EA+Q I
Sbjct: 222 VTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLI- 280
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADPKK 485
+ + FEP W AL RIH ++++ + A + LDP ++A+ +
Sbjct: 281 RSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWE 340
Query: 486 IPTPPPK--KRTAISILDGKS------RLVEF--------RNPTLYRDDEKLKALNQMKE 529
K +R I + G+S ++ EF R+ +YR E++ ++++K+
Sbjct: 341 GVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEM--MDRLKQ 398
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ Y P T VL DID+++KE++L HSE+LAIA+ L++TPAR+ +RI KNLR C DCH+A
Sbjct: 399 AGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSA 458
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+K++S + R+LIVRD RFHHF +G+CSC DYW
Sbjct: 459 MKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DLV N +I Y G + AR +FD DR SW MI+ YA + E L+L+ +M
Sbjct: 53 DLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMH 112
Query: 371 KLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+ P+ T ++V SAC A+ E ES + E + GT L+ + KC
Sbjct: 113 AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGT----ALIDMYAKC 168
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEAL 453
G + AQ+ + ++P E + W ++
Sbjct: 169 GDIESAQRVFD-RMP-EKDVQTWSSM 192
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 227/404 (56%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA +E+ G + + F C + E K++H ++
Sbjct: 364 AIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKM 423
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ N ++ MY KCGS+ +A F+ + ++ + SW+ M+ GYA +G G + L +F
Sbjct: 424 GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E M+ G++P+E T + V SAC ++ +F SM ++G+ P ++HY ++ +LG+
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EAQ I + +PF+P A W AL +RIHG+ +L + A E++ ++P +
Sbjct: 544 AGRLEEAQDLI-RNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 602
Query: 482 ------------DPKKIPTP----PPKKRTAISILDGKSRLVEFR-----NPTLYRDDEK 520
D K+ + +K S ++ ++++ F +P R
Sbjct: 603 LSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAY 662
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L+ L+ +M+E YV T+ VLHD+++E KE L YHSE+LA+A+G+++ P P+R++KN
Sbjct: 663 LEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKN 722
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH+AIK +S+IVGR +I+RD+ RFHHF +G CSCGDYW
Sbjct: 723 LRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
Q FL V G D E +F M E+ ++P ++HY ++ +LG+ L E
Sbjct: 768 QFFLLVVIYTGLLDTGAE---YFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG----- 819
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAIS 498
AL +RIHG+ +L + A ++ + P + K+ +K S
Sbjct: 820 -------------ALLGASRIHGNTELGEKAAQMFFKMGPQNSGISKMRDVGVQKVPGYS 866
Query: 499 ILDGKSRLVEFR-NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
+ ++++ F L R+ E + L ++ +E KE+ L Y SE
Sbjct: 867 WFEVQNKIHTFSVGLFLSRERENIGFLEELDLKMRER----------EEEKERTLKYLSE 916
Query: 558 RLAIAYGLISTPARTPLRIIKN-LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
LA A G+++ P P R++K + VC DC +AIK MS+IVGR + +RD+ H F +
Sbjct: 917 NLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESI 973
Query: 617 CSCGDYW 623
CSCG+YW
Sbjct: 974 CSCGEYW 980
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I YG+ G + AR+ FD M R SW +I GYA +G +E L +F ++++ G
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
N TF S C A+E IH +++K + GT ++G L+ + KCG + E
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGY----GTGCFVGNALLAMYFKCGSIDE 447
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A E + + + L YAR HG
Sbjct: 448 ANDTFE-GIEEKDVVSWNTMLAGYAR-HG 474
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA G+++EA L + D + L K +A+ + D + +R D
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD---KMPVR-DA 235
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ N +I Y + G ++ ARR+FD R + +W M++GY NG+ DE F++M
Sbjct: 236 ISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP-- 293
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ NE ++ A+ + ++ A FESM S T ++ G+ G + +
Sbjct: 294 --EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNT-----MITGYGQIGDIAQ 346
Query: 433 AQQFIEQ 439
A++F +
Sbjct: 347 ARKFFDM 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ Y + + DARR+FD M ++ + SW+ +++GYA NG DE ++F+ M
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP 169
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
+ N ++ + +A IEEA + FES
Sbjct: 170 ----EKNSISWNGLLAAYVHNGRIEEACLLFES 198
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 217/394 (55%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K + + GV D F GN + +++H + ++ D + N
Sbjct: 735 EEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNAT 794
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MYGKCG + D R+ RS SW+++I+ A +G + + F +M LGL+P+
Sbjct: 795 MDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDH 854
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+++ SAC ++E ++F SM SEFG+ EH + ++ +LG+ G L EA+ FI+
Sbjct: 855 VTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFID 914
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
K+P P W +L ++HG+++L A + + +L+ S
Sbjct: 915 -KMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWG 973
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
K++ + KK+ A S + K++++ F ++ +Y E+L+ + +E
Sbjct: 974 DVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMT--RE 1031
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
++PDT Y L D D+E KE L HSER+A+A+GLI++ +PLRI KNLRVCGDCH+
Sbjct: 1032 EGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSV 1091
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+IVGR+++VRD+ RFHHF GKCSC DYW
Sbjct: 1092 FKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKW-YENAKK 298
PA D + S+ +A ++GK AI L+ + +K + Y F + + E K
Sbjct: 514 PARDLISWNSM--MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI 571
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH + + + +L++ N ++ MYGK G M +A++V M +R + +W+ +I G+AD+
Sbjct: 572 VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKD 631
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ +Q F MR+ GL N T + + C S D + + + + G T
Sbjct: 632 PNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQS 691
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLP----------FEPTAEFW---EALRNYARIHGD-ID 464
L+ + +CG L +I L F A + EAL+ AR+ D +D
Sbjct: 692 SLITMYAQCGDL-NTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVD 750
Query: 465 LE 466
L+
Sbjct: 751 LD 752
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H ++ I+ + N ++ MY K GS+ A+ VFD M DR+ SW+ MI+G+
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF--IHFESMK----SEFG 409
G + +Q F M + G+ P+ ++ +AC + + E IH +K S
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ H+ G G + + LFE + EP W +L
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIE--------EPNIVSWTSL 321
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K D L CG+ + + + +H +S + ++ + N ++ MY + GS DA
Sbjct: 449 KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAEL 508
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF M R + SW+ M+ + ++G + L +M K N TF SAC + +
Sbjct: 509 VFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEK 568
Query: 394 IEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
++ +H F I H L LV + GK G + EAQ+ + + +P E
Sbjct: 569 LK--IVH------AFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQK-VCKIMP-ERDVVT 618
Query: 450 WEAL 453
W AL
Sbjct: 619 WNAL 622
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 127/309 (41%), Gaps = 38/309 (12%)
Query: 264 EAIELMDK-GVKADASCFYTLFELCGNPKWY-ENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+A LM + G+ ++ L C +P + ++ +H + + + D + + +I M
Sbjct: 637 QAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITM 696
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y +CG + + +FD +A+++ +W+ + + A G G+E L+ +MR G+ ++ +F
Sbjct: 697 YAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSF 756
Query: 382 LAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL-GLVGVLGKCGHLFEAQQFIEQ 439
+ G+ ++E +H +K F + E+ L + + GKCG + + + +
Sbjct: 757 SVALATIGNLTVLDEGQQLHSWIIKLGFELD---EYVLNATMDMYGKCGEIDDVFRIL-- 811
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISI 499
+P + W L + HG A M+DL P T +S+
Sbjct: 812 PIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLG-----------LKPDHVTFVSL 860
Query: 500 LDGKSR--LVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
L S LV DE L + M VP I+ LL S
Sbjct: 861 LSACSHGGLV----------DEGLVYFSSMTSEFGVPTA------IEHCVCIIDLLGRSG 904
Query: 558 RLAIAYGLI 566
RLA A G I
Sbjct: 905 RLAEAEGFI 913
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E A+++H Y ++ + ++ + ++ YG GS+++A ++F+ + + ++ SW ++ Y
Sbjct: 266 EGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCY 325
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
ADNG E L ++ +R GL T V CG
Sbjct: 326 ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCG 361
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I M+G S+ +A RVF++M +R SW+ +I A NG +E L F MR+ +
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449
Query: 376 PNEQTFLAVFSACGSA 391
+ T A+ ACGSA
Sbjct: 450 TDYITISALLPACGSA 465
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 217/399 (54%), Gaps = 35/399 (8%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L ++ V EAIE + KG+ T+ +C + K++H ++ST
Sbjct: 250 IAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA 309
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D + N +++MY KCG+M RRVF+ M + + SW+ +I GYA NG E ++ F++
Sbjct: 310 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQE 369
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M G P+ TF+A+ S C A ++ FE MK + GISP EHY LV VLG+ G
Sbjct: 370 MICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAG 429
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
+ EA + + + +PF+PT W +L N R+HG++ L + + + +L+P+ A
Sbjct: 430 RIKEALEIV-KNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLS 488
Query: 482 ---------DPKKIPTPPPKKR-----TAISILDGKSRL--------VEFRNPTLYRDDE 519
+ K+ +KR S L KS++ EFRN Y+
Sbjct: 489 NIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVW 548
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
K + + M+E YVPDT VLHD+ +E + + HSERLA + LI+T + P+RI KN
Sbjct: 549 K-RLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKN 607
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
LRVC DCH+ +K +S++ GR +++RD RFHHFKDG CS
Sbjct: 608 LRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + + VH L++T D V+NN ++ +Y + G +A R+FD M
Sbjct: 180 FSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMP 239
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
R++ SW+ +I G E ++ F M+ G+ + T + C A+
Sbjct: 240 HRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKE 299
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
IH +KS P LV + KCG +
Sbjct: 300 IHAVIVKST--AKPDAPVLNSLVDMYAKCGAM 329
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 559 LAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
LA + LI+T + P+RI KNL VC DCH+ +KI+S+ G
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNTG 739
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 209/371 (56%), Gaps = 30/371 (8%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E + VH L++ + ++ + + ++++YGKCGS+ A +VF M +R
Sbjct: 317 SVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPER 376
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSACGSADAIEEAFI 399
++ +W+ MI GYA G D L LF++M G+ + T ++V SAC A A+E
Sbjct: 377 NLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQ 436
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
FESM+ +GI PG EHY +V +LG+ G + A +FI +++P PT W AL ++
Sbjct: 437 IFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFI-KRMPILPTISVWGALLGACKM 495
Query: 460 HGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAIS 498
HG L A E + +LDP + K++ KK S
Sbjct: 496 HGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYS 555
Query: 499 ILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+ K+R+ F+ + + + +++A+ +MK++ YVPD L D+++E K +
Sbjct: 556 WVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEV 615
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
YHSE++A+A+GLI+ P P+RI KNLR+C DCH+AIK +S+IVGRE+IVRDN RFH F
Sbjct: 616 WYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRF 675
Query: 613 KDGKCSCGDYW 623
KDG CSC DYW
Sbjct: 676 KDGWCSCKDYW 686
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 18/218 (8%)
Query: 258 QEGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G+ +AI K + D A F C + E +++H + ++S R D+
Sbjct: 187 QDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVS 246
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMAD--RSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ N +I+ YGKCG + + VF + R++ SW ++ N + +F Q RK
Sbjct: 247 VFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARK 306
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCG 428
++P + +V SAC +E +H ++K+ E I G+ LV + GKCG
Sbjct: 307 -EVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGS----ALVDLYGKCG 361
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL-RNYARIHGDIDL 465
+ A+Q + +++P E W A+ YA + GD+D+
Sbjct: 362 SIEYAEQ-VFREMP-ERNLVTWNAMIGGYAHL-GDVDM 396
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K++H L+ D+ + +MY K G +AR +FD M R++ +W+ ++
Sbjct: 127 TGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAV 186
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG 413
+G + + F++ + +PN TF A +AC ++E +H ++S +
Sbjct: 187 QDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRY--RED 244
Query: 414 TEHYLGLVGVLGKCGHLFEAQ 434
+ GL+ GKCG + ++
Sbjct: 245 VSVFNGLIDFYGKCGDIVSSE 265
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 232/422 (54%), Gaps = 41/422 (9%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKW 292
++ P D V SV + + GK +EA+ L MD KG+K D +L C
Sbjct: 180 DKMPEKDLVAWNSVIN--GFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGA 237
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
K+ H Y ++ + +L +N ++++Y +CG + +A+ +FD M D++ SW +I G
Sbjct: 238 LTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297
Query: 353 YADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGIS 411
A NGLG E ++LF+ M K GL P E TF+ + AC ++E F +F M E+ I
Sbjct: 298 LAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIE 357
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE 471
P EH+ +V +L + G + +A ++I K+P +P W L +HGD DL + A
Sbjct: 358 PRIEHFGCMVDLLARAGQVKKAYEYI-LKMPMQPNVVIWRTLLGACTVHGDSDLAELARM 416
Query: 472 LMVDLDPSKA-----------------DPKKIPT----PPPKKRTAISILDGKSRLVEF- 509
++ L+P+ + D +KI +K S+++ +R+ EF
Sbjct: 417 KILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFL 476
Query: 510 -------RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
+N +Y KLK + ++++ YVP V D+++E KE AL+YHSE++AI
Sbjct: 477 MGDKSHPQNDMIY---AKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAI 533
Query: 562 AYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGD 621
A+ LISTP R P+R++KNL+VC DCH AIK++S++ RE++VRD RFHHFK+G CSC D
Sbjct: 534 AFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQD 593
Query: 622 YW 623
YW
Sbjct: 594 YW 595
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ D + L + G + +H ++S + + N ++ +Y CG + A
Sbjct: 117 VEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD M ++ + +W+ +ING+A+NG +E L L+ +M G++P+ T +++ SAC
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIG 236
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
A+ F + G++ L+ + +CG + EA+ ++ +
Sbjct: 237 ALTLG-KRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 223/407 (54%), Gaps = 38/407 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ L Q G K A+ + GV + + + C + VHD+ S
Sbjct: 501 AIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS 560
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQL 365
+ +L + + MYG+CGS+ AR +F+ +A +R + ++ MI Y+ NGL E L+L
Sbjct: 561 GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKL 620
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F +M++ G +P+EQ+F++V SAC +E + F SM+ +GI+P +HY V VLG
Sbjct: 621 FWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLG 680
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+ G L +A++ I + + +PT W+ L R + D+D A ++ +LDP
Sbjct: 681 RAGWLADAEELI-RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYV 739
Query: 484 -------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYR 516
++ + +K S ++ KSR+ EF R+ +YR
Sbjct: 740 VLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYR 799
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
+ E+L A +++E YVPDTR VL +D+ KE+ L HSERLAIA G++S+ T +R+
Sbjct: 800 ELERLHA--EIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDT-VRV 856
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+KNLRVC DCHNA K +S+IV +E++VRD RFHHF DG CSCGDYW
Sbjct: 857 MKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ K AI + + GV+ DA F + + C + +H + ++S ++G V
Sbjct: 105 EHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSV 164
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N ++ +YG CG + A +F+ M +R + SW+ I A +G L+LF++M+ G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEG 223
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P T + + C + I +A IHF + E G+ L + GHL++
Sbjct: 224 VRPARITLVIALTVCAT---IRQAQAIHF--IVRESGLEQTLVVSTALASAYARLGHLYQ 278
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A++ ++ + + W A+ HG
Sbjct: 279 AKEVFDRAAERDVVS--WNAMLGAYAQHG 305
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFE-LCGNP---KWYENAKKVHDYFLQSTIR 309
Q+G++K A+EL + G+ + + L E + NP + +K+H +
Sbjct: 400 QKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYA 459
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDH--MADR-SMDSWHLMINGYADNGLGDEGLQLF 366
+ + V++MY CG++ +A F M DR + SW+ +I+ + +G G L F
Sbjct: 460 SEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFF 519
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M G+ PN+ T +AV AC A A+ E I + ++ G+ L + G+
Sbjct: 520 RRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS-GMESNLFVATALASMYGR 578
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEAL 453
CG L A++ E K+ E + A+
Sbjct: 579 CGSLESAREIFE-KVAVERDVVIFNAM 604
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L G+ + +++H + + +L N ++ +Y KC S+ D VF + R
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-----A 397
SW +I Y ++G + +F +M++ G++ + TFLAV AC + + A
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+I +K + ++ H G G + LFE +
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME 190
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G + A+EL + GV+ +C + A+ +H +S
Sbjct: 198 AAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIR---QAQAIHFIVRES 254
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ LV++ + Y + G + A+ VFD A+R + SW+ M+ YA +G E LF
Sbjct: 255 GLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 367 EQMRKLGLQPNEQTFLAVFSACGS 390
+M G+ P++ T + + C S
Sbjct: 315 ARMLHEGISPSKVTLVNASTGCSS 338
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H L+ + D+VL N +++MY +CGS +AR +F + ++ SW+ MI G +
Sbjct: 343 RMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAV-SWNTMIAGSSQK 401
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
G ++LF++M+ G+ P T+L + A S
Sbjct: 402 GQMKRAVELFQRMQLEGMAPVRATYLNLLEAVAS 435
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 214/388 (55%), Gaps = 32/388 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKC 325
E+ G D F + C N K+VH ++S I + V +NN ++ MY KC
Sbjct: 336 EMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKC 395
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ DARRVFD M + +M S + MI GYA +G+ E L+LFE M + + PN TF+AV
Sbjct: 396 GNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVL 455
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC +EE +F MK F I P EHY ++ +LG+ G L EA++ IE +PF P
Sbjct: 456 SACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIET-MPFNP 514
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------K 484
+ W L R HG+++L A + L+P A P +
Sbjct: 515 GSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKR 574
Query: 485 KIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL-KALNQMKESTYVPDTRY 538
+ KK+ S ++ ++ F +P + + + L +MK++ YVPD R+
Sbjct: 575 LMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRW 634
Query: 539 VL---HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
L +++ + KE+ LLYHSE+LA+A+GLIST P+ ++KNLR+CGDCHNAIK++S
Sbjct: 635 ALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISA 694
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
I GRE+ VRD RFH FK+G CSCGDYW
Sbjct: 695 ITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC- 325
E++ +G+K D ++ K + H ++S G+ + + +I++Y KC
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYAD-NGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
G M + R+VF+ +A + W+ MI+G++ L ++G+ F +M+ G P++ +F+ V
Sbjct: 293 GGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCV 352
Query: 385 FSACG--SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
SAC S+ ++ + +H ++KS+ + + + LV + KCG++ +A++ +
Sbjct: 353 TSACSNLSSPSVGKQ-VHALAIKSDIPYNRVSVNN-ALVAMYSKCGNVHDARRVFD 406
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMAD---RSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+NN V+ Y + G + +ARRVF M + R SW+ MI + G E ++LF +M
Sbjct: 176 VNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMV 235
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC-GH 429
+ GL+ + T +V +A + + F M + G + GL+ + KC G
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVKDLVGG-MQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGG 294
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE 471
+ E ++ E+ P W + I G ED +E+
Sbjct: 295 MVECRKVFEEIAA--PDLVLWNTM-----ISGFSQYEDLSED 329
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 31/141 (21%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD--- 336
F L + C + K +H + +S I L+N +Y KCGS+ +A+ FD
Sbjct: 12 FRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQ 71
Query: 337 --------------------HMADRSMD--------SWHLMINGYADNGLGDEGLQLFEQ 368
H+A + D S++ +I YAD G L+LF +
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE 131
Query: 369 MRKLGLQPNEQTFLAVFSACG 389
+R+L + T V ACG
Sbjct: 132 VRELRFGLDGFTLSGVIIACG 152
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 216/427 (50%), Gaps = 34/427 (7%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTL 283
++N ++ P D L +A + GK E+ L D+ G D T+
Sbjct: 151 MIDNAKQLFDRMPKKD--LVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTI 208
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
C A+ VHDY D+ L +I+MY KCGS+ +R +FD M +++
Sbjct: 209 VNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNV 268
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
SW MI Y +G G E L+LF M G+ PN TF+++ AC A +++ F
Sbjct: 269 ISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSL 328
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
M +G+ P +HY +V +LG+ G L +A + IE + E W A RIH +
Sbjct: 329 MSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIEN-MEVEKDEGIWCAFLGACRIHRQV 387
Query: 464 DLEDHAEELMVDLDPSK-----------------ADPKKIPTPPPKKR-------TAISI 499
DL + A +L++ L D KI K+R T I +
Sbjct: 388 DLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEV 447
Query: 500 LDGKSRLVEFRNPTLYRDD--EKLKALNQMKEST-YVPDTRYVLHDIDQEAKEQALLYHS 556
+ R N L ++ E LK+L+Q ES YVPDT VLHD+D+E K L HS
Sbjct: 448 DNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHS 507
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
E+LAIA+GLI+TP TP+RI KNLRVCGDCH+ K++S I R++IVRD RFHHFK+G
Sbjct: 508 EKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGI 567
Query: 617 CSCGDYW 623
CSCGDYW
Sbjct: 568 CSCGDYW 574
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ G K D + + C + + +H L++ + D + + +++MY KCG
Sbjct: 91 ELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCG 150
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +A+++FD M + + + +MI GYA+ G +E LF+QMR+ G P++ + + +
Sbjct: 151 MIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVN 210
Query: 387 ACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC A+ +A +H + + + GT ++ + KCG + +++ ++
Sbjct: 211 ACAKLGAMNKARLVHDYVCARRYSLDVELGT----AMIDMYAKCGSIDSSREIFDR 262
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K+VH + I DL++ NK++ M K + A +F+ M +R SW +MI G+ N
Sbjct: 20 KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTE 415
G + Q F ++ + G +P+ + V AC + I IH +K+ G+
Sbjct: 80 GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKN--GLHLDNF 137
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + KCG + A+Q ++
Sbjct: 138 VCSTLVDMYAKCGMIDNAKQLFDR 161
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 212/381 (55%), Gaps = 32/381 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV D TL + E +++H L+ D + +++MY KCGS+ DA
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+F + ++ +W+ M+ G A +G G E LQLF+QM+ LG++P++ TF+ V SAC +
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ EA+ H SM ++GI P EHY L LG+ G + +A+ IE + E +A +
Sbjct: 733 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES-MSMEASASMYR 791
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDP----------------SKADPKKIPTP-----P 490
L R+ GD + +++L+P SK D K+
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 491 PKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHD 542
KK S ++ K+++ F + +YR + + + +K+ YVP+T + L D
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM--IRDIKQEGYVPETDFTLVD 909
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+++E KE+AL YHSE+LA+A+GL+STP TP+R+IKNLRVCGDCHNA+K ++++ RE++
Sbjct: 910 VEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIV 969
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD RFH FKDG CSCGDYW
Sbjct: 970 LRDANRFHRFKDGICSCGDYW 990
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 261 KVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
K + LM K G ++D T+F+ CG K+VH Y ++S DL +++ ++
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 559
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG M+ A+ FD + +W MI+G +NG + +F QMR +G+ P+E
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 619
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T + A A+E+ IH ++K ++ + ++G LV + KCG + +A
Sbjct: 620 TIATLAKASSCLTALEQGRQIHANALK----LNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGD 462
++ TA W A+ HG+
Sbjct: 676 FKRIEMMNITA--WNAMLVGLAQHGE 699
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++++ V+ D F + ++VH L+ + L ++N +I MY K
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
AR VFD+M++R + SW+ +I G A NGL E + LF Q+ + GL+P++ T +V
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 387 ACGS 390
A S
Sbjct: 425 AASS 428
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG-LGDEGLQ----LFEQ 368
L N +I MY KCGS+T ARRVFD M DR + SW+ ++ YA + E +Q LF
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 369 MRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGISPGTEHYLG-LVGVL 424
+R+ + + T + C G A E F + G+ G E G LV +
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASES----FHGYACKIGL-DGDEFVAGALVNIY 190
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
K G + E + E+ +P+ + L+ Y ++ ++ A +L S +P
Sbjct: 191 LKFGKVKEGKVLFEE-MPYRDVVLWNLMLKAYL----EMGFKEEAIDLSSAFHSSGLNPN 245
Query: 485 KIP 487
+I
Sbjct: 246 EIT 248
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGN-PKWYENAKKVHDYFLQST 307
+A + Q G EA+ +L+ G+K D ++ + + P+ +K+VH + ++
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFD-HMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D ++ +I+ Y + M +A +F+ H D + +W+ M+ GY + G + L+LF
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD--LVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
M K G + ++ T VF CG AI + +H ++KS + + G++ +
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMYV 563
Query: 426 KCGHLFEAQQFIEQKLP 442
KCG + A QF +P
Sbjct: 564 KCGDM-SAAQFAFDSIP 579
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ +LC + + ++ H Y + + GD + ++ +Y K G + + + +F+ M R
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
+ W+LM+ Y + G +E + L GL PNE T
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 221/399 (55%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G V EA+ E+ + +K D+ ++ AK +H ++ + ++
Sbjct: 310 QNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVF 369
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG++ AR++FD M R + +W+ MI+GY +GLG ++LF++M+K
Sbjct: 370 VMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGT 429
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ TFL SAC + +EE FESMK ++GI P +HY +V +LG+ G L +A
Sbjct: 430 IKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQA 489
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
FI QK+P +P + A+ +IH ++DL + A + L+P
Sbjct: 490 WDFI-QKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYAT 548
Query: 481 ----ADPKKIPTPPPK----KRTAISILDGKSRLVEFRNPT--------LYRDDEKLKAL 524
K+ T K K S+++ + + F + T +Y E L +
Sbjct: 549 ASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETL--V 606
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++++ + YVPDT + HD++ + K Q L HSE+LAIA+GL++T TP+ I KNLRVCG
Sbjct: 607 DEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCG 665
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K +S + GRE+IVRD RFH FKDG CSCGDYW
Sbjct: 666 DCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTL 283
Q+N+ N ++ P D V ++ ++ Q G K A+ L+ ++G + D+ ++
Sbjct: 80 QINDAYNMFDRMPERDLVCWNTM--ISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSI 137
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ + VH Y L++ + ++ +++MY KCGS++ AR +FD M R++
Sbjct: 138 LPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTV 197
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
SW+ MI+GY +G + + +F++M G+QP T + AC +E F+H
Sbjct: 198 VSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVH 255
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L +LCG+ + K++H + S +L V+ MY KC + DA +FD M
Sbjct: 33 FTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMP 92
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+R + W+ MI+GYA NG L L +M + G +P+ T +++ A +
Sbjct: 93 ERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMA 152
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+H +++ G LV + KCG + A+ +
Sbjct: 153 VHGYVLRA--GFESLVNVSTALVDMYSKCGSVSIARVIFD 190
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EG + +++D+GV+ C + E K VH Q + D+ + N +
Sbjct: 214 EGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSL 273
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY KC + A +F ++ ++++ SW+ MI GYA NG +E L F +M+ ++P+
Sbjct: 274 ISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDS 333
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T ++V A +A +IH ++ + LV + KCG + A++
Sbjct: 334 FTMVSVIPALAELSIPRQAKWIHGLVIRRF--LDKNVFVMTALVDMYAKCGAIHTARKLF 391
Query: 438 EQ 439
+
Sbjct: 392 DM 393
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 220/401 (54%), Gaps = 39/401 (9%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA+EL D GVK D+S F +L C VH+Y ++ ++V
Sbjct: 196 QNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVV 255
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++ MY +CG+++ AR VFD M ++++ +W MI+GY +G G + ++LF +M G
Sbjct: 256 LGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDG 315
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PN TF+AV SAC A ++E F +MK E+G+ P EH + +V +LG+ GHL EA
Sbjct: 316 PRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEA 375
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
QFI+ P EP W A+ ++H + DL E ++ ++P
Sbjct: 376 YQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYAL 435
Query: 479 -SKAD-PKKIPTPPP----KKRTAISILDGKSRLVEFR----------NPTLYRDDEKLK 522
+ D +KI KK S +D ++ F LY D+
Sbjct: 436 AGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDE---- 491
Query: 523 ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+++ +E+ Y+P + V+H++++E +E AL YHSE+LAIA+GL+ T + +RI+KNLR+
Sbjct: 492 LMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRM 551
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH AIK +S I RE+ VRD RFHHFKDG CSC DYW
Sbjct: 552 CEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D + ++ Y K G + AR+VFD M ++++ +W+ MI+GY NG G E ++LF M+
Sbjct: 152 DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQ 211
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS---EFGISPGTEHYLGLVGVLGKC 427
LG++P+ TF+++ SAC AI F E + + + GT L+ + +C
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGT----ALMNMYSRC 267
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
G++ +A++ + E W A+ + +HG
Sbjct: 268 GNVSKAREVFDSME--EKNIVAWTAMISGYGMHG 299
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 204/375 (54%), Gaps = 39/375 (10%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
T+ C K++H L+S + D+ L N +++MYGKCG + +RRVFD M +
Sbjct: 349 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 408
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW++M+N YA NG +E + LFE M + G+ P+ TF+A+ S C E F
Sbjct: 409 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF 468
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
E MK+EF +SP EHY LV +LG+ G + EA + IE +PF+P+A W +L N R+HG
Sbjct: 469 ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET-MPFKPSASIWGSLLNSCRLHG 527
Query: 462 DIDLEDHAEELMVDLDPSK-----------ADPKK----------IPTPPPKKRTAISIL 500
++ + + A + + L+P AD K + KK S +
Sbjct: 528 NVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 587
Query: 501 DGKSRL--------VEFRNPTLYRDDEKLKALNQMKE----STYVPDTRYVLHDIDQEAK 548
K ++ EFRN DE K +++E S Y P+T VLHD+D+E K
Sbjct: 588 QVKDKIQIFVAGGGYEFRN-----SDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETK 642
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
+ HSERLA Y LI T P+RI KNLRVC DCH+ +KI+S++ R +++RD KR
Sbjct: 643 ANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKR 702
Query: 609 FHHFKDGKCSCGDYW 623
FHHF DG CSC DYW
Sbjct: 703 FHHFVDGICSCKDYW 717
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + K + +H ++ + D V+ N ++++Y + G DAR+VFD M++R++ +W
Sbjct: 253 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 312
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMK 405
+ +I+ + E LF +M++ + + T + AC A+ IH + +K
Sbjct: 313 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 372
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
S+ P L+ + GKCG + +++ + L + + W + N I+G+I+
Sbjct: 373 SKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS--WNIMLNCYAINGNIEE 428
Query: 466 EDHAEELMVD 475
+ E M++
Sbjct: 429 VINLFEWMIE 438
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 256 LCQEGKVKEAIELMDKGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQS-TIR 309
L + K+ EA+ L++ + ++ + L C + K + K+ L + ++R
Sbjct: 112 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLR 171
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS---WHLMINGYADNGLGDEGLQLF 366
+ L +K+I ++ C + AR++FD + D S+ + W M GY+ NG + L ++
Sbjct: 172 HNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY 231
Query: 367 EQMRKLGLQPNEQTFLAVFSAC 388
M ++P + AC
Sbjct: 232 VDMLCSFIEPGNFSISVALKAC 253
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 216/413 (52%), Gaps = 34/413 (8%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKK 298
D+ + A + R Q+G+ KE +L + G++ + F + C N E KK
Sbjct: 266 DRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKK 325
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH Y + + ++ MY KCG+M A RVF + SW +I GYA NG
Sbjct: 326 VHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQ 385
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
DE ++ FE + K G QP+ TF+ V SAC A +++ +F S+K ++G++ +HY
Sbjct: 386 PDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYA 445
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
++ +L + G EA+ I K+ +P W +L RIHG++ L A E + +++P
Sbjct: 446 CIIDLLARSGQFDEAENII-SKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEP 504
Query: 479 --------------------------SKADPKKIPTPPPKKRTAISILDGKSRLV-EFRN 511
D + + P AI D LV + +
Sbjct: 505 ENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIK-RDVHVFLVGDDSH 563
Query: 512 PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
P +E L L++ MKE +VPDT +VLHD++ E KEQ L YHSE+LA+A+G+ISTP
Sbjct: 564 PKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPE 623
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP+++ KNLR C DCH AIK +S+I R++IVRD+ RFH F+DG CSC DYW
Sbjct: 624 GTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ + D V+ + + +MYGKCGS+ +AR +FD M DR + +W MI+ Y
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G EG LF + + G++PNE TF V +AC + + EE + G P +
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTS-EELGKKVHGYMTRVGFDPFSF 340
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + KCG++ A++ ++
Sbjct: 341 AASALVHMYSKCGNMVSAERVFKE 364
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 233 PNNMNQCPAGDQVLPPSVADLAR-------LCQEGKVKEAIELMDKGVKADASCFYTLFE 285
P + D L P + + R LCQ+ ++KEA++++ + K AS + TL +
Sbjct: 19 PKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQ 78
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C + + KKVH + S L + N+++EMY KC S+ D++++FD M +R + S
Sbjct: 79 SCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCS 138
Query: 346 WHLMINGYADNGLGDEGLQLFEQM 369
W+++I+GYA GL E LF++M
Sbjct: 139 WNILISGYAKMGLLQEAKSLFDKM 162
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 222/397 (55%), Gaps = 36/397 (9%)
Query: 260 GKVKEAIELMDKGVKADAS-CFYT---LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++A++L +K + C YT CG ++ K++H + +Q G
Sbjct: 409 GFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAG 468
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I MY +CG++ +A +F M + SW+ MI+ +G G E L+LF++M G+
Sbjct: 469 NALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIY 528
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ +FL V +AC + ++E F +FESMK +FGI PG +HY L+ +LG+ G + EA+
Sbjct: 529 PDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD 588
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------- 478
I + +PFEPT WEA+ + R GD++L HA + + + P
Sbjct: 589 LI-KTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAG 647
Query: 479 ---SKADPKKIPTP-PPKKRTAISILDGKSRLVEF-----RNP---TLYRDDEKLKALNQ 526
A +K+ KK S ++ +++ F ++P +Y+ E + A +
Sbjct: 648 CWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGA--K 705
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M++ YVPDT+ VLHD++ KE L HSERLA+ +GL++ P + ++KNLR+C DC
Sbjct: 706 MRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDC 765
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H AI MS+ VGRE++VRD +RFHHFKDG+CSCG+YW
Sbjct: 766 HAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 258 QEGKVKEAIELMDKGVK----ADASCFYTLFELCGNPKWYENAKKVHDYFLQS----TIR 309
G EA EL + V D F ++ C N + + K VH ++
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L +NN ++ Y KCG++ ARR+FD+M + + SW+ +++GY ++ D+ +++FE+M
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
NE +++ + S E+A F M+SE + P Y G + G+ G
Sbjct: 391 P----YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSE-NVKPCDYTYAGAIAACGELGA 445
Query: 430 LFEAQQF 436
L +Q
Sbjct: 446 LKHGKQL 452
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G + + L+ C +P+ +A+KV D + + DL V+ Y + G + A
Sbjct: 192 GALSVCNALVALYMKCESPEATRDARKVLD---EMPNKDDLTWTTMVVG-YVRRGDVGAA 247
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ + + W+ MI+GY +G+ E +LF +M + +E TF +V SAC +
Sbjct: 248 RSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANV 307
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIE 438
+H + ++ + P + LV KCG++ A++ +
Sbjct: 308 GLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFD 357
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 211/380 (55%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+A + ++ C E +VH ++ D+ + N +I+MY KCGS+ DAR
Sbjct: 345 VQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDAR 404
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+FD + R SW+ +I GY+ +GLG E +++F M++ +P+E TF+ V SAC +
Sbjct: 405 FMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTG 464
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E +F SMK ++GI P EHY +V ++G+ G+L +A +FIE +PFEP+ W A
Sbjct: 465 RLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIED-IPFEPSVMIWRA 523
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L IH D++L + + +++L+P K +
Sbjct: 524 LLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGV 583
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE--------STYVPDTRYVLHDI 543
KK +S ++ + + F D LK +N M E + Y P VL D+
Sbjct: 584 KKEPGLSWIENQGNVHCFTVADTSHAD--LKLINGMLEFLNMKTRKAGYSPQLNAVLLDV 641
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ + KE+ L HSERLA+A+GL+ PA P+RIIKNLR+C DCH+ IK++S+IVGR++IV
Sbjct: 642 EDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIV 701
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF++G CSC DYW
Sbjct: 702 RDMNRFHHFENGSCSCADYW 721
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q K EA EL + G + + F T+ +L + +W E + VH L+ +
Sbjct: 23 QSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTF 82
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+ Y G ++ AR VFD ++ + M SW MI YA+N E L+ F QMR G
Sbjct: 83 IGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAG 142
Query: 374 LQPNEQTFLAVFSAC 388
+PN TF V AC
Sbjct: 143 FKPNNFTFAGVLKAC 157
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 114/226 (50%), Gaps = 14/226 (6%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKK 298
+ V+P S ++R Q G+ ++A+E+ + +A + F ++ + + + + +K
Sbjct: 211 NDVIPWSFM-ISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + L++ + D+ ++N ++ Y KCG + + +F+ ++DR+ SW+ +I Y G
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTE 415
G+ L LF M + +Q E T+ ++ AC + A+E +H + K+ +G ++ G
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN- 388
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + +A +F+ L W A+ +HG
Sbjct: 389 ---ALIDMYAKCGSIKDA-RFMFDMLDLRDKVS-WNAIICGYSMHG 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+E + G K + F + + C + ++ K VH L++ DL + ++
Sbjct: 130 EALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLL 189
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
E+Y +CG DA R F M + W MI+ +A +G ++ L++F QMR+ + PN+
Sbjct: 190 ELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQF 249
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF +V A ++++ + IH ++K+ G+S L+ KCG + ++ + E
Sbjct: 250 TFSSVLQASADIESLDLSKTIHGHALKA--GLSTDVFVSNALMACYAKCGCIEQSMELFE 307
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 204/375 (54%), Gaps = 39/375 (10%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
T+ C K++H L+S + D+ L N +++MYGKCG + +RRVFD M +
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW++M+N YA NG +E + LFE M + G+ P+ TF+A+ S C E F
Sbjct: 402 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF 461
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
E MK+EF +SP EHY LV +LG+ G + EA + IE +PF+P+A W +L N R+HG
Sbjct: 462 ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET-MPFKPSASIWGSLLNSCRLHG 520
Query: 462 DIDLEDHAEELMVDLDPSK-----------ADPKK----------IPTPPPKKRTAISIL 500
++ + + A + + L+P AD K + KK S +
Sbjct: 521 NVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 580
Query: 501 DGKSRL--------VEFRNPTLYRDDEKLKALNQMKE----STYVPDTRYVLHDIDQEAK 548
K ++ EFRN DE K +++E S Y P+T VLHD+D+E K
Sbjct: 581 QVKDKIQIFVAGGGYEFRN-----SDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETK 635
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
+ HSERLA Y LI T P+RI KNLRVC DCH+ +KI+S++ R +++RD KR
Sbjct: 636 ANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKR 695
Query: 609 FHHFKDGKCSCGDYW 623
FHHF DG CSC DYW
Sbjct: 696 FHHFVDGICSCKDYW 710
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + K + +H ++ + D V+ N ++++Y + G DAR+VFD M++R++ +W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMK 405
+ +I+ + E LF +M++ + + T + AC A+ IH + +K
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
S+ P L+ + GKCG + +++ + L + + W + N I+G+I+
Sbjct: 366 SKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS--WNIMLNCYAINGNIEE 421
Query: 466 EDHAEELMVD 475
+ E M++
Sbjct: 422 VINLFEWMIE 431
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 256 LCQEGKVKEAIELMDKGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQS-TIR 309
L + K+ EA+ L++ + ++ + L C + K + K+ L + ++R
Sbjct: 105 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLR 164
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS---WHLMINGYADNGLGDEGLQLF 366
+ L +K+I ++ C + AR++FD + D S+ + W M GY+ NG + L ++
Sbjct: 165 HNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY 224
Query: 367 EQMRKLGLQPNEQTFLAVFSAC 388
M ++P + AC
Sbjct: 225 VDMLCSFIEPGNFSISVALKAC 246
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 215/397 (54%), Gaps = 36/397 (9%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E V+ ++ D G+ D F + + C E+ +++H++ +Q+ D+ + +
Sbjct: 158 EAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAAL 217
Query: 319 IEMYGKCGSMTDARRVFDHMADRS---MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
I+MY KCG + AR VFD + R + SW+ MI GYA +G E L LFE+M ++ +
Sbjct: 218 IDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-K 276
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF+ V SAC +EE ++ FE+M ++ I P +HY +V +LG G L EA
Sbjct: 277 PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYN 336
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------------- 482
I Q + P + W AL N +IH +++L + A E +++L+P A
Sbjct: 337 LIMQ-MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAG 395
Query: 483 --------PKKIPTPPPKKRTAISILDGKSRLVEFRN--------PTLYRDDEKLKALNQ 526
K + KK A S ++ K+++ F + +Y + E++ L
Sbjct: 396 KWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGL-- 453
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
MKE+ Y P T V HD++ + K + HSERLAIA+GLISTP T L I KNLR+C DC
Sbjct: 454 MKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDC 513
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H AIK +S+I RE+ VRD R+HHFKDG CSCGDYW
Sbjct: 514 HVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L + C K + K++H + D V+ K++ +Y C S++ AR +FD +
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---E 396
++ W+++I GYA NG + +QL+ QM GL P+ TF V AC + AIE E
Sbjct: 138 KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGRE 197
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF-WEALRN 455
H E + G L+ + KCG + A++ ++ L + W A+
Sbjct: 198 IHEHVVQTGWEKDVFVGA----ALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMIT 253
Query: 456 YARIHG 461
+HG
Sbjct: 254 GYAMHG 259
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 188/315 (59%), Gaps = 32/315 (10%)
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
M+++++ SW+ MI GY +G G++ L LF QM++ G++PNE TF++V SAC A ++E
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
+ + M ++ I+P EHY +V +LG+ GHL EA FIE K+P EP A W A
Sbjct: 61 WKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIE-KMPIEPGASVWGAFLGSC 119
Query: 458 RIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTA 496
RIH +I+L + EL+++LDP A K + KK
Sbjct: 120 RIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPG 179
Query: 497 ISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAK 548
S+++ ++L F + +Y E L QM+ YVP T +VLHD+++E K
Sbjct: 180 CSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLA--RQMEAVGYVPCTDFVLHDVEEEIK 237
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
E L HSE+LAIA+GLIST + T +RI KNLRVCGDCH+A K +S+IV RE+I+RD R
Sbjct: 238 ENMLFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNR 297
Query: 609 FHHFKDGKCSCGDYW 623
FHHFKDG CSCGDYW
Sbjct: 298 FHHFKDGLCSCGDYW 312
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 211/392 (53%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK E+ GV+ D ++ C N E + H L S + + ++N +
Sbjct: 353 EEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL 412
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I +YGKCGS ++ R+F M R SW ++ GYA G +E + LFE+M GL+P+
Sbjct: 413 ITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDG 472
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V SAC A +E+ +FESM E GI P +H ++ +LG+ G L EA+ FI
Sbjct: 473 VTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFI- 531
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKADPK 484
+P P W L + R+HGD+++ A + ++ L+P SK
Sbjct: 532 NNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWD 591
Query: 485 KIP-------TPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKEST 531
K+ +K S + K ++ F +P L + +L+ LN +M E
Sbjct: 592 KVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEG 651
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPD VLHD+++ K + L +HSE+LAIA+GLI P P+R+IKNLRVCGDCHNA K
Sbjct: 652 YVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATK 711
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S+I RE++VRD RFH FKDG CSCGD+W
Sbjct: 712 FISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G +EA+++ + G D F ++ CG+ K++H Y +++ + +
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +++MY KC S+ A VF M +++ SW M+ GY NG +E +++F +M++
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364
Query: 372 LGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
G++P++ T +V S+C + ++EE A H ++ S G+ L+ + GKCG
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVS--GLISFITVSNALITLYGKCG 420
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + + L D + + F T+ LC + + ++++ L+ D+ + +
Sbjct: 118 CSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGS 177
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSM-------------------------------DS 345
+++MY K G + DA+R FD M +R++ S
Sbjct: 178 PLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSIS 237
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
W +MI G NGL E L +F +MR G ++ TF +V +ACGS A+ E
Sbjct: 238 WTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEG 289
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 39/195 (20%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH-- 337
+ +L +LC + AKK+H L++ + + L+N +I Y K G++ A VFDH
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 338 -----------------------------MADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
M R SW+L I+GYA+ G + +++++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 369 MRK-LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVL 424
M K + N TF + C ++ I+ + +K F G++ ++G LV +
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGF----GSDVFVGSPLVDMY 183
Query: 425 GKCGHLFEAQQFIEQ 439
K G +++A+++ ++
Sbjct: 184 TKLGLIYDAKRYFDE 198
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 229/428 (53%), Gaps = 36/428 (8%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYT 282
+ L+N ++ P D V+ S+ + Q EA+ L + G AD + +
Sbjct: 201 SDLDNALGVFDEMPTRDLVVWNSI--IGGFAQNSDGNEALNLFKRMKRAGFLADQATLTS 258
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ C E ++VH + L+ DL+LNN +I+MY KCGS+ DA F M ++
Sbjct: 259 VLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKD 316
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ SW M+ G A NG + L+LFE M++ G +PN T L V AC A +E+ + +F
Sbjct: 317 VISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFR 376
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
SMK FG+ PG EHY L+ +LG+ G L EA + I + + EP + W L R+H +
Sbjct: 377 SMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHE-MECEPDSVTWRTLLGACRVHRN 435
Query: 463 IDLEDHAEELMVDLDPSK--------------------ADPKKIPTPPPKKRT---AISI 499
+DL +A + +++L+P A+ +K T ++T +
Sbjct: 436 VDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIE 495
Query: 500 LDGKSRLVEFRNPTLYRDDEKLKALNQMKEST----YVPDTRYVLHDIDQEAKEQALLYH 555
+D + + + + + +E ++ LN + E YVPDT +VL D++ E KE +L YH
Sbjct: 496 VDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYH 555
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LAI +GL++ +RI KNLR+CGDCH K++SR+ R +++RD R+HHF+DG
Sbjct: 556 SEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDG 615
Query: 616 KCSCGDYW 623
CSCGDYW
Sbjct: 616 VCSCGDYW 623
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 248 PSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P V + A C + + A+ MD GV ADA + L + C + K+VH++
Sbjct: 22 PLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHI 81
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+ + N ++ MY K + +A +FD M +R++ SW MI+ Y+ N L D+ L
Sbjct: 82 FCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKAL 140
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC 388
+ M + G++PN T+ +V AC
Sbjct: 141 KCLILMFREGVRPNMFTYSSVLRAC 165
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELC-GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
+K I + +GV+ + + ++ C G P N +++H +++ + D+ + + +I+
Sbjct: 140 LKCLILMFREGVRPNMFTYSSVLRACDGLP----NLRQLHCGIIKTGLESDVFVRSALID 195
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
+Y K + +A VFD M R + W+ +I G+A N G+E L LF++M++ G ++ T
Sbjct: 196 VYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQAT 255
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+V AC +E +H +K + + L+ + KCG L +A
Sbjct: 256 LTSVLRACTGLALLELGRQVHVHVLKFDQDLILNN----ALIDMYCKCGSLEDA 305
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 205/357 (57%), Gaps = 22/357 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D GVK D F + +C E+AK+ H ++ D+V N ++++Y K G
Sbjct: 323 EMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA+ VFD M +++ SW+ +I GY ++G G E +++FE+M G+ PN TFLAV S
Sbjct: 383 RIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + + FESM + I P HY ++ +LG+ G L EA I+ PF+PT
Sbjct: 443 ACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDA-PFKPT 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
W AL R+H + +L A E + + P K + ++I + RL
Sbjct: 502 VNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVV---------LLNIYNRSGRL 552
Query: 507 VEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+E + ++ + YVP +++L D+D E +E+ LLYHSE+LAIA+GLI
Sbjct: 553 -----------EEAAALMLEISKHGYVPQDKFLLPDVD-EQEERVLLYHSEKLAIAFGLI 600
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+T TPL+I+++ R+CGDCH+AIK+++ + RE++VRD RFHHFKDG CSCGDYW
Sbjct: 601 NTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 657
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 264 EAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EA+EL ++ D+ + L C K KKV +Y + S + D L N+V
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ M+ KCG M DARR+FD M ++++ SW+ +I G D G E +LF M +
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ F+ + A I +H S+K+ G+ L+ + KCG + +AQ
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKT--GVGGDVFVACALIDMYSKCGSIEDAQCVF 290
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
+Q +P E T W ++ +HG
Sbjct: 291 DQ-MP-EKTTVGWNSIIAGYALHG 312
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
A + F T+ +++H L++ + GD+ + +I+MY KCGS+ DA+ V
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
FD M +++ W+ +I GYA +G +E L ++ +MR G++ + TF + C ++
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349
Query: 395 EEA 397
E A
Sbjct: 350 EHA 352
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 215/395 (54%), Gaps = 36/395 (9%)
Query: 262 VKEAIELMDK--GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ--STIRGDLVLNNK 317
+K +E++ + GV +A + C + K++H Y L+ + N
Sbjct: 461 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 520
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I MY KCG + AR VFD M+ +S SW M+ GY +G G E L +F++MRK G P+
Sbjct: 521 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 580
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TFL V AC +++ +F+SM +++G++P EHY + +L + G L +A + +
Sbjct: 581 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTV 640
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----------------- 480
+ +P EPTA W AL + R+H +++L +HA +V+++
Sbjct: 641 -KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 699
Query: 481 ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
D +I KKR S + G+ F +P +Y E L ++++K
Sbjct: 700 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL--IDRIK 757
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVP+T + LHD+D+E K L+ HSE+LA+AYGL++T P+RI KNLRVCGDCH+
Sbjct: 758 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHS 817
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A +S+IV E++VRD RFHHFK+G CSCG YW
Sbjct: 818 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
++D + CG+ K K+VH +++ D+ + N +I+ Y KCG M +A +
Sbjct: 224 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVK 283
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ M + + SW+ M+ GY+ +G +LF+ MRK + + T+ AV +
Sbjct: 284 VFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGC 343
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
EA F M S + + ++ VL C L Q +E
Sbjct: 344 SHEALNVFRQMI----FSGSLPNCVTIISVLSACASLGAFSQGME 384
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+ +++ G + ++ C + + ++H Y L++
Sbjct: 333 AVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKN 392
Query: 307 TIRG----------DLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYA 354
+ DL++ N +I+MY KC S AR +FD + +R++ +W +MI G+A
Sbjct: 393 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 452
Query: 355 DNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSACGSADAI 394
G ++ L+LF +M G+ PN T + AC AI
Sbjct: 453 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAI 494
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G++ AI ++ G + D + + CG Y H + ++
Sbjct: 94 KQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 153
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMR 370
+ N ++ MY +CGS+ +A +FD + R +D SW+ +++ + + L LF +M
Sbjct: 154 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 213
Query: 371 KLGLQ--PNEQ----TFLAVFSACGSADAI 394
+ + NE+ + + + ACGS A+
Sbjct: 214 LIVHEKPTNERSDIISIVNILPACGSLKAV 243
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 215/395 (54%), Gaps = 36/395 (9%)
Query: 262 VKEAIELMDK--GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ--STIRGDLVLNNK 317
+K +E++ + GV +A + C + K++H Y L+ + N
Sbjct: 354 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 413
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I MY KCG + AR VFD M+ +S SW M+ GY +G G E L +F++MRK G P+
Sbjct: 414 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 473
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TFL V AC +++ +F+SM +++G++P EHY + +L + G L +A + +
Sbjct: 474 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTV 533
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----------------- 480
+ +P EPTA W AL + R+H +++L +HA +V+++
Sbjct: 534 -KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 592
Query: 481 ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
D +I KKR S + G+ F +P +Y E L ++++K
Sbjct: 593 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL--IDRIK 650
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVP+T + LHD+D+E K L+ HSE+LA+AYGL++T P+RI KNLRVCGDCH+
Sbjct: 651 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHS 710
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A +S+IV E++VRD RFHHFK+G CSCG YW
Sbjct: 711 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
++D + CG+ K K+VH +++ D+ + N +I+ Y KCG M +A +
Sbjct: 117 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVK 176
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ M + + SW+ M+ GY+ +G +LF+ MRK + + T+ AV +
Sbjct: 177 VFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGC 236
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
EA F M S + + ++ VL C L Q +E
Sbjct: 237 SHEALNVFRQMI----FSGSLPNCVTIISVLSACASLGAFSQGME 277
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 191 NFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSV 250
N + + WN GY Q+ N + + N+P +M
Sbjct: 179 NMMEFKDVVSWN-AMVAGYSQSGNFKAAFELFKNMRKE--NIPLDM----------VTWT 225
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+ +++ G + ++ C + + ++H Y L++
Sbjct: 226 AVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKN 285
Query: 307 TIRG----------DLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYA 354
+ DL++ N +I+MY KC S AR +FD + +R++ +W +MI G+A
Sbjct: 286 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 345
Query: 355 DNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSACGSADAI 394
G ++ L+LF +M G+ PN T + AC AI
Sbjct: 346 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAI 387
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + D + + CG Y H + ++ + N ++ MY +CGS
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 328 MTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMRKLGLQ--PNEQ--- 379
+ +A +FD + R +D SW+ +++ + + L LF +M + + NE+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 380 -TFLAVFSACGSADAI 394
+ + + ACGS A+
Sbjct: 121 ISIVNILPACGSLKAV 136
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 221/400 (55%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G +A+EL +G++ + ++ +C ++ +++H ++S D+
Sbjct: 389 RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + ++ MY KCG++ A++VFD A + + W+ +I GYA +GLG E L++F M G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P++ TF+ V SAC +++ F SM++++ + EHY +V +LG+ G L EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
IE K+P E A W AL R H +DL + A + ++ L+P A P
Sbjct: 569 MDLIE-KMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYAS 627
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKA 523
+ + K S + + ++ +F + + R E L
Sbjct: 628 QGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSG 687
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L ++E+ Y PD +VLHD+D+E K Q+L YHSE+LA+AYGL+ P P+R++KNLRVC
Sbjct: 688 L--LREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVC 745
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH AIK+++++ GRE+I+RD RFHHFKDG CSC DYW
Sbjct: 746 GDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V N +I +G+ G + AR+VFD M ++ +W MI Y GL + L+LF M++
Sbjct: 346 VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR 405
Query: 372 LGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++PN + ++V S C G A+ IH + ++S+F + L+ + KCG+L
Sbjct: 406 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASV--LLSMYIKCGNL 463
Query: 431 FEAQQFIEQ 439
+A+Q ++
Sbjct: 464 AKAKQVFDR 472
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V +I Y + G + +AR +FD M R++ SW MI GY N D +LFE M
Sbjct: 252 DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP 311
Query: 371 KLGLQPNEQTFLAV---FSACGSADAIEEAF 398
+ NE ++ A+ ++ CG D E F
Sbjct: 312 ----EKNEVSWTAMLKGYTNCGRLDEASELF 338
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y G + +AR VFD M +R++ SW M+ GY G+ E LF QM +
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP----E 219
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N ++ + I+EA F+ M + ++ ++G + G L EA+
Sbjct: 220 KNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTN-----MIGGYCQVGRLVEARM 274
Query: 436 FIEQ 439
++
Sbjct: 275 LFDE 278
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
++ N +I Y + G + AR VFD M D+++ SW+ ++ GY N E +F++M
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 31/40 (77%)
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+A+ +FD M++R+ SW+ +++GY +NG+ +E ++F++M
Sbjct: 147 EAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM 186
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 221/400 (55%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G +A+EL +G++ + ++ +C ++ +++H ++S D+
Sbjct: 389 RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + ++ MY KCG++ A++VFD A + + W+ +I GYA +GLG E L++F M G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P++ TF+ V SAC +++ F SM++++ + EHY +V +LG+ G L EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
IE K+P E A W AL R H +DL + A + ++ L+P A P
Sbjct: 569 MDLIE-KMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYAS 627
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKA 523
+ + K S + + ++ +F + + R E L
Sbjct: 628 QGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSG 687
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L ++E+ Y PD +VLHD+D+E K Q+L YHSE+LA+AYGL+ P P+R++KNLRVC
Sbjct: 688 L--LREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVC 745
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH AIK+++++ GRE+I+RD RFHHFKDG CSC DYW
Sbjct: 746 GDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V N +I +G+ G + AR+VFD M ++ +W MI Y GL + L+LF M++
Sbjct: 346 VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR 405
Query: 372 LGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++PN + ++V S C G A+ IH + ++S+F + L+ + KCG+L
Sbjct: 406 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASV--LLSMYIKCGNL 463
Query: 431 FEAQQFIEQ 439
+A+Q ++
Sbjct: 464 AKAKQVFDR 472
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V +I Y + G + +AR +FD M R++ SW MI GY N D +LFE M
Sbjct: 252 DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP 311
Query: 371 KLGLQPNEQTFLAV---FSACGSADAIEEAF 398
+ NE ++ A+ ++ CG D E F
Sbjct: 312 ----EKNEVSWTAMLKGYTNCGRLDEASELF 338
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y G + +AR VFD M +R++ SW M+ GY G+ E LF QM +
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP----E 219
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N ++ + I+EA F+ M + ++ ++G + G L EA+
Sbjct: 220 KNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTN-----MIGGYCQVGRLVEARM 274
Query: 436 FIEQ 439
++
Sbjct: 275 LFDE 278
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
++ N +I Y + G + AR VFD M D+++ SW+ ++ GY N E +F++M
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 31/40 (77%)
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+A+ +FD M++R+ SW+ +++GY +NG+ +E ++F++M
Sbjct: 147 EAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM 186
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 214/387 (55%), Gaps = 32/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+EL +G++ + F +L + C N E ++H ++ D +++ +++MYGKC
Sbjct: 298 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 357
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A + FD + D + +W+ +++ + +GLG + +++FE+M G++PN TF+++
Sbjct: 358 GLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLL 417
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+ C A +EE +F SM +G+ PG EHY ++ +LG+ G L EA++FI ++PFEP
Sbjct: 418 TGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI-NRMPFEP 476
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------K 484
A W + RIHGD ++ A E +V L+P +
Sbjct: 477 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 536
Query: 485 KIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
++ KK S +D + F R +Y + L L+Q+K + YVP T
Sbjct: 537 RMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTL--LDQIKAAGYVPRT 594
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
V D+D KE+ L HSER+A+A+ LIS P P+ + KNLRVC DCH+AIK +S++
Sbjct: 595 DSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 654
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR++IVRDN RFHHF DG CSCGDYW
Sbjct: 655 TGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +EA+ +++D+ V D + CG K + + VH ++ D+ +
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245
Query: 316 NKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N + +MY K G M A VF ++ R++ S+ +I+GY + ++GL +F ++R+ G+
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PNE TF ++ AC + A+E+ +H + MK F P LV + GKCG L +A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQA 363
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKK 493
Q ++ +PT W +L + HG E MVD P
Sbjct: 364 IQAFDE--IGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD-----------RGVKPNA 410
Query: 494 RTAISILDGKSR--LVE 508
T IS+L G S LVE
Sbjct: 411 ITFISLLTGCSHAGLVE 427
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + + L N ++ MY KCG + A ++FD M R++ SW MI+G +
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
N E ++ F MR G P + F + AC S +IE +H ++K FGI G+
Sbjct: 84 NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK--FGI--GS 139
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
E ++G L + KCG +F+A + E+ +P + + + Y++I G+ + A +
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEE-MPCKDEVSWTAMIDGYSKI-GEFEEALLAFKK 197
Query: 473 MVD 475
M+D
Sbjct: 198 MID 200
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + E K++H L+ I +L + + + +MY KCG+M DA +VF+ M
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ SW MI+GY+ G +E L F++M + ++ + ACG+ A
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 214/387 (55%), Gaps = 32/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+EL +G++ + F +L + C N E ++H ++ D +++ +++MYGKC
Sbjct: 233 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 292
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A + FD + D + +W+ +++ + +GLG + +++FE+M G++PN TF+++
Sbjct: 293 GLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLL 352
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+ C A +EE +F SM +G+ PG EHY ++ +LG+ G L EA++FI ++PFEP
Sbjct: 353 TGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI-NRMPFEP 411
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------K 484
A W + RIHGD ++ A E +V L+P +
Sbjct: 412 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 471
Query: 485 KIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
++ KK S +D + F R +Y + L L+Q+K + YVP T
Sbjct: 472 RMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTL--LDQIKAAGYVPRT 529
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
V D+D KE+ L HSER+A+A+ LIS P P+ + KNLRVC DCH+AIK +S++
Sbjct: 530 DSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 589
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR++IVRDN RFHHF DG CSCGDYW
Sbjct: 590 TGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 10/208 (4%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +EA+ +++D+ V D + CG K + + VH ++ D+ +
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 316 NKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N + +MY K G M A VF ++ R++ S+ +I+GY + ++GL +F ++R+ G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PNE TF ++ AC + A+E+ +H + MK F P LV + GKCG L +A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQA 298
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
Q ++ +PT W +L + HG
Sbjct: 299 IQAFDE--IGDPTEIAWNSLVSVFGQHG 324
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + E K++H L+ I +L + + + +MY KCG+M DA +VF+ M
Sbjct: 44 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 103
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ SW MI+GY+ G +E L F++M + ++ + ACG+ A
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 157
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
M R++ SW MI+G + N E ++ F MR G P + F + AC S +IE
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 398 F-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
+H ++K FGI G+E ++G L + KCG +F+A + E+ +P + + +
Sbjct: 61 KQMHCLALK--FGI--GSELFVGSNLEDMYSKCGAMFDACKVFEE-MPCKDEVSWTAMID 115
Query: 455 NYARIHGDIDLEDHAEELMVD 475
Y++I G+ + A + M+D
Sbjct: 116 GYSKI-GEFEEALLAFKKMID 135
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 220/397 (55%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
G++++A++L + G++AD +L C + + + +H Q + D+
Sbjct: 347 HSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVY 406
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++MY KCG + +A VF M +R + +W MI G A NG+G + L+ F QM++ G
Sbjct: 407 LGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDG 466
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
QP T++AV +AC + ++E +HF M+S + P EHY ++ +L + G L EA
Sbjct: 467 FQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEA 526
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+ Q +P +P A W ++ + R+H +IDL HA E ++ L P +
Sbjct: 527 MHLV-QTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYID 585
Query: 481 ----ADPKKIPTPPPK---KRTA----ISILDGKSRLV--EFRNPTLYRDDEKLKALN-Q 526
AD K++ + K+TA I++ + V + +P ++ + +
Sbjct: 586 SRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACR 645
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K Y P T + D+D+E KEQALL HSE++AIA+GLIS P P+ I+KNLRVC DC
Sbjct: 646 LKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDC 705
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK++S++ RE+IVRD RFHHF+DG CSC D+W
Sbjct: 706 HSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y K G + AR +FD M R + +++ MI GY +G + LQLF QMR+ G++
Sbjct: 308 NAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMR 367
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEA 433
+ T +++ +AC S A+ S++ + YLG L+ + KCG + EA
Sbjct: 368 ADNFTVVSLLTACASLGALPHGRALHASIEQRI---VEEDVYLGTALLDMYMKCGRVDEA 424
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N +I MY G DARR FD + + W +I G GL DE +L Q
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQ---- 196
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ N ++ ++ + A +A F M S+ G++P + ++G L C L
Sbjct: 197 APERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSD-GVAPDE---VAVIGALSACSKL 250
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V+ VI + G + +ARR+ +R++ SW +I GY+ G + + F M
Sbjct: 170 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 229
Query: 371 KLGLQPNEQTFLAVFSAC 388
G+ P+E + SAC
Sbjct: 230 SDGVAPDEVAVIGALSAC 247
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 231/408 (56%), Gaps = 38/408 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G +EA+EL + G+K++ + + + K+VH++ L+S
Sbjct: 436 AIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS 495
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I +VL N +I+MY KCG++T +RR+FD M +R++ SW+ M+ GY+ +G G E L+LF
Sbjct: 496 EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLF 555
Query: 367 EQMRK-LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS-EFGISPGTEHYLGLVGVL 424
MR+ ++P+ T LAV S C ++ F M S + + P EHY +V +L
Sbjct: 556 TLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLL 615
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD-- 482
G+ G + EA +FI +K+PFEPTA W +L R+H ++D+ + A + +++++P A
Sbjct: 616 GRSGRVEEAFEFI-KKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNY 674
Query: 483 -----------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDE 519
KK T P R++I LD + + R +E
Sbjct: 675 VILSNLYASAGRWEDVSSLRDLMLKKTVTKEPG-RSSIE-LDQVLHTFHASDRSHPRREE 732
Query: 520 ---KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
K+K L+ KE YVPD VLHD+D+E KE+ LL HSE+LA+++GLI++PA P+R
Sbjct: 733 ICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIR 792
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IKNLR+C DCHN K +S++ GRE+ +RD RFH GKCSC DYW
Sbjct: 793 VIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ C + + +++H ++ + + + +++MY K G + +AR VF+ +
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+R + S +I+GYA GL +E L+LF +++ G++ N T+ V +A A++
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQ 487
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+H ++SE ++ L+ + KCG+L +++ + +E T W A+
Sbjct: 488 VHNHVLRSEIPSFVVLQN--SLIDMYSKCGNLTYSRRIFDTM--YERTVISWNAMLVGYS 543
Query: 459 IHGD 462
HG+
Sbjct: 544 KHGE 547
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N + + ++VH + +++ + L ++I +Y KC S+ DA VFD M +R++ SW
Sbjct: 253 CVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSW 312
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGL---------------------QPNEQTFLAVF 385
MI+ Y+ G + L LF K+ L +PNE TF V
Sbjct: 313 TAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVL 372
Query: 386 SACGSA 391
++C S+
Sbjct: 373 TSCTSS 378
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 212/387 (54%), Gaps = 32/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+EL +G++ + F +L + C N E ++H ++ D +++ +++MYGKC
Sbjct: 298 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 357
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A + FD + D + +W+ +++ + +GLG + ++ FE+M G++PN TF+++
Sbjct: 358 GLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLL 417
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+ C A +EE +F SM +G+ PG EHY ++ +LG+ G L EA++FI ++PFEP
Sbjct: 418 TGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI-NRMPFEP 476
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------------------ 481
A W + RIHGD ++ A E +V L+P +
Sbjct: 477 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 536
Query: 482 -----DPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDT 536
+ KK+P + + G R +Y + L L+Q+K + YVP T
Sbjct: 537 RMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXL--LDQIKAAGYVPXT 594
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
V D+D KE+ L HSER+A+A+ LIS P P+ + KNLRVC DCH+AIK +S++
Sbjct: 595 DSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 654
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR++IVRDN RFHHF DG CSCGDYW
Sbjct: 655 TGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +EA+ +++D+ V D + CG K + + VH ++ D+ +
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245
Query: 316 NKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N + +MY K G M A VF ++ R++ S+ +I+GY + ++GL +F ++R+ G+
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PNE TF ++ AC + A+E+ +H + MK F P LV + GKCG L A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEHA 363
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
Q ++ +PT W +L + HG
Sbjct: 364 IQAFDE--IGDPTEIAWNSLVSVFGQHG 389
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + + L N ++ MY KCG + A ++FD M R++ SW MI+G +
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
N E ++ F MR G P + F + AC S +IE +H ++K FGI G+
Sbjct: 84 NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK--FGI--GS 139
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
E ++G L + KCG +F+A + E+ +P + + + Y++I G+ + A +
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEE-MPCKDEVSWTAMIDGYSKI-GEFEEALLAFKK 197
Query: 473 MVD 475
M+D
Sbjct: 198 MID 200
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + E K++H L+ I +L + + + +MY KCG+M DA +VF+ M
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ SW MI+GY+ G +E L F++M + ++ + ACG+ A
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 225/408 (55%), Gaps = 33/408 (8%)
Query: 248 PSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P A ++ Q+G +E ++L +K V AD + F +L + K++H +
Sbjct: 379 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 438
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++S ++ + ++++Y KCGS+ DA + F M DR++ SW+ MI+ YA NG + L
Sbjct: 439 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 498
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
+ F++M GLQP+ +FL V SAC + +EE HF SM + + P EHY +V +
Sbjct: 499 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDM 558
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-AD 482
L + G EA++ + + +P +P W ++ N RIH + +L A + + +++ + A
Sbjct: 559 LCRSGRFNEAEKLMAE-MPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAA 617
Query: 483 P---------------------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYR 516
P K + KK A S ++ K F +P +
Sbjct: 618 PYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEE 677
Query: 517 DDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
+K+ L + M+E Y PDT LH+ D++ K ++L YHSERLAIA+ LISTP +P+
Sbjct: 678 IRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPIL 737
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLR C DCH AIK++S+IVGRE+ VRD+ RFHHF+DG CSCGD+W
Sbjct: 738 VMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ + N +E +++H + +T ++++ N +++MY KCG +A +F ++
Sbjct: 314 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 373
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
RS W MI+ Y G +EGLQLF +MR+ + ++ TF ++ A S ++
Sbjct: 374 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433
Query: 399 IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+H +KS F + G+ L+ V KCG + +A Q Q++P
Sbjct: 434 LHSFIIKSGFMSNVFSGS----ALLDVYAKCGSIKDAVQTF-QEMP 474
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N +I Y K G++ +AR++FD M +R+ +W ++I GY+ E +LF QM++
Sbjct: 79 VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 138
Query: 373 GLQPNEQTFLAVFSAC 388
G +P+ TF+ + S C
Sbjct: 139 GTEPDYVTFVTLLSGC 154
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 222 GHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFY 281
GH++ NQ+ V + + +++ + + C+ ++ A +L + + D+ F
Sbjct: 156 GHEMGNQITQVQTQIIKLGYDSRLIVGNTL-VDSYCKSNRLDLACQLFKEMPEIDSFTFA 214
Query: 282 TLFELCGNPKWYENA--KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ LC N + +++H + +++ ++ ++N +++ Y K S+ DAR++FD M
Sbjct: 215 AV--LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 272
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS-ACGSADAIEEAF 398
++ S++++I+GYA +G LF +++ + F + S A + D
Sbjct: 273 EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ 332
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFI 437
IH +++ + + +E +G LV + KCG EA+
Sbjct: 333 IHAQTIVT----TADSEILVGNSLVDMYAKCGKFEEAEMIF 369
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 224/403 (55%), Gaps = 33/403 (8%)
Query: 253 LARLCQEGKVKEAIELMDKGVKA-----DASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G EA L VK +A + C + + K +HD ++
Sbjct: 271 IAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME 330
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ +LV+ +++MY KCG + AR+ FD + +++ SW +M+ GY +G G E +++F
Sbjct: 331 LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFY 390
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M + G++PN TF++V +AC A ++E + F MK EF + PG EHY +V +LG+
Sbjct: 391 EMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRA 450
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------- 480
G+L EA I Q++ +P W +L RIH +++L + + + LDPS
Sbjct: 451 GYLKEAYGLI-QEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLL 509
Query: 481 ----ADPKK----------IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL 521
AD + + K SI++ K R+ F +P + E L
Sbjct: 510 SNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYL 569
Query: 522 KALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
LN +++E Y+P+ VL+D+D E K L HSE+LA+A+G++++ + ++IIKNL
Sbjct: 570 DELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNL 629
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
R+CGDCH AIK++S+IV RE+++RD+KRFHHFKDG CSCGDYW
Sbjct: 630 RICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH ++ G L + N +++ Y KCG ++ +R+VFD M + + SW+ +I YA NGL
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279
Query: 359 GDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGT 414
E LF M K G ++ N T AV AC + A++ IH + +K E + GT
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339
Query: 415 EHYLGLVGVLGKCGHLFEAQQ 435
+V + KCG + A++
Sbjct: 340 S----IVDMYCKCGRVEMARK 356
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
+L++LC K++H D+ + + +I+MY KCG + DAR++FD + +R
Sbjct: 98 SLYDLCA-------GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER 150
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM 369
++ SW MI+GY N E + LF++
Sbjct: 151 NVVSWTSMISGYVQNERAREAVFLFKEF 178
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 332 RRVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
R +F D+ S+ SW+ +I +A +G + L F MRKL L PN TF +C S
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 391 A-DAIEEAFIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQ 439
D IH + F G++ ++ L+ + KCG+L +A++ ++
Sbjct: 99 LYDLCAGKQIH----QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDE 146
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 230/423 (54%), Gaps = 41/423 (9%)
Query: 236 MNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPK 291
++ P D V SV + + GK +EA+ E+ KG+K D +L C
Sbjct: 179 FDKMPEKDLVAWNSVIN--GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 292 WYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN 351
K+VH Y ++ + +L +N ++++Y +CG + +A+ +FD M D++ SW +I
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 352 GYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
G A NG G E ++LF+ M GL P E TF+ + AC ++E F +F M+ E+ I
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
P EH+ +V +L + G + +A ++I + +P +P W L +HGD DL + A
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYI-KSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 471 ELMVDLDPSKA-----------------DPKKIPT----PPPKKRTAISILDGKSRLVEF 509
++ L+P+ + D +KI KK S+++ +R+ EF
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 510 --------RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLA 560
++ +Y KLK + +++ YVP V D+++E KE A++YHSE++A
Sbjct: 476 LMGDKSHPQSDAIY---AKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532
Query: 561 IAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
IA+ LISTP R+P+ ++KNLRVC DCH AIK++S++ RE++VRD RFHHFK+G CSC
Sbjct: 533 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQ 592
Query: 621 DYW 623
DYW
Sbjct: 593 DYW 595
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++S + + N ++ +Y CG + A +VFD M ++ + +W+ +ING+A+
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
NG +E L L+ +M G++P+ T +++ SAC A+ +H +K G++
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNL 257
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKL 441
L+ + +CG + EA+ ++ +
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMV 284
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 225/408 (55%), Gaps = 33/408 (8%)
Query: 248 PSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P A ++ Q+G +E ++L +K V AD + F +L + K++H +
Sbjct: 419 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 478
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++S ++ + ++++Y KCGS+ DA + F M DR++ SW+ MI+ YA NG + L
Sbjct: 479 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 538
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
+ F++M GLQP+ +FL V SAC + +EE HF SM + + P EHY +V +
Sbjct: 539 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDM 598
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-AD 482
L + G EA++ + + +P +P W ++ N RIH + +L A + + +++ + A
Sbjct: 599 LCRSGRFNEAEKLMAE-MPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAA 657
Query: 483 P---------------------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYR 516
P K + KK A S ++ K F +P +
Sbjct: 658 PYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEE 717
Query: 517 DDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
+K+ L + M+E Y PDT LH+ D++ K ++L YHSERLAIA+ LISTP +P+
Sbjct: 718 IRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPIL 777
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLR C DCH AIK++S+IVGRE+ VRD+ RFHHF+DG CSCGD+W
Sbjct: 778 VMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ + N +E +++H + +T ++++ N +++MY KCG +A +F ++
Sbjct: 354 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 413
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
RS W MI+ Y G +EGLQLF +MR+ + ++ TF ++ A S ++
Sbjct: 414 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 473
Query: 399 IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+H +KS F + G+ L+ V KCG + +A Q Q++P
Sbjct: 474 LHSFIIKSGFMSNVFSGS----ALLDVYAKCGSIKDAVQTF-QEMP 514
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N +I Y K G++ +AR++FD M +R+ +W ++I GY+ E +LF QM++
Sbjct: 84 VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 143
Query: 373 GLQPNEQTFLAVFSAC 388
G +P+ TF+ + S C
Sbjct: 144 GTEPDYVTFVTLLSGC 159
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + KEA EL + G + D F TL C + +V ++ L+
Sbjct: 126 QLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI 185
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++ Y K + A ++F M + S++ MI GY+ +GL ++ + LF +M+ G
Sbjct: 186 VGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG 245
Query: 374 LQPNEQTFLAVFSA-CGSADAIEEAFIHFESMKSEF 408
L+P E TF AV A G D + IH +K+ F
Sbjct: 246 LKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNF 281
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENA--KKVHDYFLQSTIRGDLVLNN 316
E V +E+ + G+K F + LC N + +++H + +++ ++ ++N
Sbjct: 232 EKAVNLFVEMQNSGLKPTEFTFAAV--LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSN 289
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+++ Y K S+ DAR++FD M ++ S++++I+GYA +G LF +++
Sbjct: 290 ALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDR 349
Query: 377 NEQTFLAVFS-ACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEA 433
+ F + S A + D IH +++ + + +E +G LV + KCG EA
Sbjct: 350 KQFPFATMLSIASNTLDWEMGRQIHAQTIVT----TADSEILVGNSLVDMYAKCGKFEEA 405
Query: 434 QQFI 437
+
Sbjct: 406 EMIF 409
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 209/383 (54%), Gaps = 27/383 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ + VK A F ++ C + +++H ++ + + + +++MY KCG+
Sbjct: 319 MLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGN 378
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ AR VFD + R M +W +I G A +G + + LFE M + G++P F+AV +A
Sbjct: 379 IKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTA 438
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A ++E + +F SM+ +FGI+PG EHY + +LG+ G L EA FI +PT
Sbjct: 439 CSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTG 498
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT------------------- 488
W L R H ++L + + ++ +D + +
Sbjct: 499 SVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHM 558
Query: 489 --PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVL 540
KK A S ++ +++ F +P + ++ L L QM++ YV DT VL
Sbjct: 559 RKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVL 618
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
HD+D+E K + L HSERLAIAYG+IST A T +R+IKN+RVC DCH AIK +++IVGRE
Sbjct: 619 HDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGRE 678
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+ VRDN RFHHFK+G CSCGDYW
Sbjct: 679 ITVRDNSRFHHFKNGSCSCGDYW 701
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 10/238 (4%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTL 283
++ V + P D V +V +A Q G EA++++ + +K D+ ++
Sbjct: 176 IDCVKKVFDMMPVRDVVSWNTV--IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSI 233
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ K++H Y +++ GD+ + + +I+MY KC + + R F + +
Sbjct: 234 LPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDA 293
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
SW+ +I G NG D GL F +M K ++P +F +V AC A+
Sbjct: 294 ISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGR-QLHG 352
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
G LV + KCG++ A+ ++ + A W A+ +HG
Sbjct: 353 CIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVA--WTAIIMGCAMHG 408
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 16/122 (13%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK---CGSMTDA----- 331
F +L + K ++ A +H ++ + DL + N +I Y K G + D
Sbjct: 113 FPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRG 172
Query: 332 -------RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLA 383
++VFD M R + SW+ +I G+A NG+ E L + +M K G L+P+ T +
Sbjct: 173 ESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSS 232
Query: 384 VF 385
+
Sbjct: 233 IL 234
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 211/379 (55%), Gaps = 28/379 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV D TL + E +++H L+ D + +++MY KCGS+ DA
Sbjct: 620 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDA 679
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+F + ++ +W+ M+ G A +G G E LQLF+QM LG++P++ TF+ V SAC +
Sbjct: 680 YCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHS 739
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ EA+ + SM ++GI P EHY L LG+ G + EA+ I+ + E +A +
Sbjct: 740 GLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDS-MSMEASASMYR 798
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDP----------------SKADPKKIPTP-----P 490
L R+ GD + +++L+P SK D K+
Sbjct: 799 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 858
Query: 491 PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVLHDID 544
KK S ++ K+++ F NP +K+K + +K+ YVP+T + L D++
Sbjct: 859 VKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVE 918
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+E KE+AL YHSE+LA+A+GL+STP TP+R+IKNLRVCGDCHNA+K +S++ RE+++R
Sbjct: 919 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLR 978
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D RFH FKDG CSCGDYW
Sbjct: 979 DANRFHRFKDGICSCGDYW 997
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 261 KVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
K E LM K G ++D T+ + CG K+VH Y ++S DL +++ ++
Sbjct: 507 KTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 566
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG M+ A+ FD + +W +I+G +NG + L +F QMR +G+ P+E
Sbjct: 567 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEF 626
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T + A A+E+ IH ++K ++ ++ ++G LV + KCG + +A
Sbjct: 627 TIATLAKASSCLTALEQGRQIHANALK----LNCTSDPFVGTSLVDMYAKCGSIDDAYCL 682
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGD 462
++ TA W A+ HG+
Sbjct: 683 FKRIEMMNITA--WNAMLVGLAQHGE 706
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K +++++ ++ D F + ++VH L+ + L ++N +I M
Sbjct: 307 LKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINM 366
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y K + AR VF++M++R + SW+ +I G A + L E + LF Q+ + GL+P+ T
Sbjct: 367 YCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTM 426
Query: 382 LAVFSACGS 390
+V A S
Sbjct: 427 TSVLKAASS 435
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG-----DEGLQLFEQ 368
L N +I MY KCGS+T ARRVFD M +R + SW+ ++ YA + G E LF
Sbjct: 83 LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142
Query: 369 MRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGISPGTEHYLG-LVGVL 424
+R+ + + T + C G A E F + G+ G + G LV +
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASES----FHGYACKIGLD-GDDFVAGALVNIY 197
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
K G + E + E+ +P+ + L+ Y
Sbjct: 198 LKFGKVKEGRVLFEE-MPYRDVVLWNLMLKAY 228
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ +LC + + ++ H Y + + GD + ++ +Y K G + + R +F+ M R
Sbjct: 158 MLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRD 217
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
+ W+LM+ Y + G +E + L GL PNE T
Sbjct: 218 VVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 7/190 (3%)
Query: 266 IELMDKGVKADASCFYTLFELCGN-PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
++L+ G+K D ++ + + P+ +K++H + +++ D ++ +I+ Y +
Sbjct: 412 MQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSR 471
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
M +A +F + + +W+ M++GY + G + L+LF M K G + ++ T V
Sbjct: 472 NRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATV 530
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
CG AI + +H ++KS + + G++ + KCG + A QF +P
Sbjct: 531 LKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMYVKCGDM-SAAQFAFDSIPV 587
Query: 444 EPTAEFWEAL 453
P W L
Sbjct: 588 -PDDVAWTTL 596
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 223/407 (54%), Gaps = 38/407 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ L Q G K A+ + GV + + + C VHD+ S
Sbjct: 501 AIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS 560
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQL 365
+ ++ + + MYG+CGS+ AR +F+ +A +R + ++ MI Y+ NGL E L+L
Sbjct: 561 GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKL 620
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F +M++ G +P+EQ+F++V SAC +E + F SM+ +GI+P +HY V VLG
Sbjct: 621 FWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLG 680
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+ G L +A++ I + + +PT W+ L R + D+D A ++ +LDP
Sbjct: 681 RAGWLADAEELI-RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYV 739
Query: 484 -------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYR 516
++ + +K+ S ++ KSR+ EF R+ +YR
Sbjct: 740 VLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYR 799
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
+ E+L A +++E YVPDTR VL +D+ KE+ L HSERLAIA G++S+ T +R+
Sbjct: 800 ELERLHA--EIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDT-VRV 856
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+KNLRVC DCHNA K +S+IV +E++VRD RFHHF DG CSCGDYW
Sbjct: 857 MKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ K AI + + GV+ DA F + + C + +H + ++S + G V
Sbjct: 105 EHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSV 164
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N ++ +YG CG + A +F+ M +R + SW+ I A +G D L+LF++M+ G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEG 223
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P T + S C A + IH S+ E G+ L + GHL +A
Sbjct: 224 VRPARITLVITLSVC--AKIRQARAIH--SIVRESGLEQTLVVSTALASAYARLGHLDQA 279
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ ++ E W A+ HG
Sbjct: 280 KEVFDR--AAERDVVSWNAMLGAYAQHG 305
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFE-LCGNP---KWYENAKKVHDYFLQSTIR 309
Q+G++K A+EL + G+ + + L E + NP + +K+H +
Sbjct: 400 QKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYA 459
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDH--MADR-SMDSWHLMINGYADNGLGDEGLQLF 366
+ + V++MY CG++ +A F M DR + SW+ +I+ + +G G L F
Sbjct: 460 SEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFF 519
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M G+ PN+ T +AV AC A A+ E I + ++ G+ L + G+
Sbjct: 520 RRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGR 578
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEAL 453
CG L A++ E K+ E + A+
Sbjct: 579 CGSLESAREIFE-KVAVERDVVIFNAM 604
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 25/196 (12%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G + A+EL + GV+ +C + A+ +H +S
Sbjct: 198 AAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---QARAIHSIVRES 254
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ LV++ + Y + G + A+ VFD A+R + SW+ M+ YA +G E LF
Sbjct: 255 GLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH--YLG--LVG 422
+M G+ P++ T + + C S + F M + G + LG L+
Sbjct: 315 ARMLHEGIPPSKVTLVNASTGCSS--------LRFGRMIHACALEKGLDRDIVLGNALLD 366
Query: 423 VLGKCG------HLFE 432
+ +CG HLFE
Sbjct: 367 MYTRCGSPEEARHLFE 382
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 11/209 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
L G+ + +++H + + +L N ++ +Y KC S+ D VF +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAF 398
R SW +I Y ++G + +F +M++ G++ + TFLAV AC D +
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
IH ++S G+ + L+ + G CG + A E+ E W A
Sbjct: 150 IHAWIVES--GLEGKSVLANLLLHIYGSCGCVASAMLLFER---MERDLVSWNAAIAANA 204
Query: 459 IHGDIDLEDHAEELMVDLDPSKADPKKIP 487
GD+D+ A EL + P +I
Sbjct: 205 QSGDLDM---ALELFQRMQLEGVRPARIT 230
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H L+ + D+VL N +++MY +CGS +AR +F+ + ++ SW+ MI G +
Sbjct: 343 RMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAV-SWNTMIAGSSQK 401
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
G L+LF++M+ G+ P T+L + A S
Sbjct: 402 GQMKRALELFQRMQLEGMAPVRATYLNLLEAVAS 435
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 223/419 (53%), Gaps = 41/419 (9%)
Query: 243 DQVLPPSV----ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYE 294
D++ P V A + L + + EA+ EL + G+K + C +
Sbjct: 171 DKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLD 230
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ +H+Y + + +N +I+MY KCGS+ DA VF M R +W +I YA
Sbjct: 231 LGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYA 290
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+G G + + + +M+K +QP+E TFL + AC +EE F +F M +E+GI P
Sbjct: 291 THGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSI 350
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
+HY +V +LG+ G L EA +FI++ LP +PT W L + HG++++ E +
Sbjct: 351 KHYGCMVDLLGRAGRLDEAYKFIDE-LPIKPTPILWRTLLSACSTHGNVEMGKRVIERIF 409
Query: 475 DLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF---- 509
+LD S K + K S ++ + + EF
Sbjct: 410 ELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGE 469
Query: 510 ----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH-DIDQEAKEQALLYHSERLAIAYG 564
+ TL+R ++L + ++K + YVPDT V + D++ E KE L YHSE+LAI +G
Sbjct: 470 GVHSTSTTLHRALDEL--VKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFG 527
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
L++TP T +R++KNLRVCGDCHNA K +S I GR++I+RD +RFHHFKDGKCSCGDYW
Sbjct: 528 LLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L K K++H + ++ + ++ + +I MY CG + +RRVFD +
Sbjct: 115 FRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKID 174
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
+ + +++ +I A N +E L LF +++++GL+P + T L V S+C +++
Sbjct: 175 EPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRW 234
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
E +K ++G + L+ + KCG L +A + + +P T + W A+
Sbjct: 235 MHEYVK-KYGFDRYVKVNTTLIDMYAKCGSLDDAVN-VFRDMPKRDT-QAWSAIIVAYAT 291
Query: 460 HGD 462
HGD
Sbjct: 292 HGD 294
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 205/366 (56%), Gaps = 32/366 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG E K VH Y + I+ ++ + +++MY KCGS+ DAR+VFD M + + +W
Sbjct: 266 CGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAW 325
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI GY +G DE LQLF +M +G++P++ TF+AV +AC A + + + F+SMK
Sbjct: 326 NSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKD 385
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+G+ P EHY +V +LG+ G + EA + + + EP W L RIH ++ L
Sbjct: 386 GYGMEPKVEHYGCMVNLLGRAGRMQEAYDLV-RSMEVEPDPVLWGTLLWACRIHSNVSLG 444
Query: 467 DHAEELMVDLDPSKADPKKIPT---------------------PPPKKRTAISILDGKSR 505
+ E++V + + + + +K S ++ K+R
Sbjct: 445 EEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNR 504
Query: 506 LVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
+ EF R+ +Y EK+ +KE Y P T VLHDI ++ KEQ+L HSE
Sbjct: 505 VHEFVAGDRRHPRSKDIYSMLEKMNG--WLKERHYTPKTDAVLHDIGEQEKEQSLEVHSE 562
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LA+A+GLIST ++I+KNLRVC DCH +KIMS+I GR++I+RD RFHHF++G C
Sbjct: 563 KLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSC 622
Query: 618 SCGDYW 623
SC DYW
Sbjct: 623 SCRDYW 628
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
LV ++ Y K G + +AR +F+ M + + W++MI+GYA +G +E L F +M
Sbjct: 183 LVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMM 242
Query: 372 LG-------LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGV 423
+ ++PNE T +AV S+CG A+E ++H S GI LV +
Sbjct: 243 MMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVH--SYVENNGIKVNVRVGTALVDM 300
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG--DIDLEDHAEELMVDLDPSKA 481
KCG L +A++ + + A W ++ IHG D L+ E + + PS
Sbjct: 301 YCKCGSLEDARKVFDVMEGKDVVA--WNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDI 358
Query: 482 DPKKIPTP 489
+ T
Sbjct: 359 TFVAVLTA 366
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L L N K + ++H L+ + +LN K+ Y G + + +F + +
Sbjct: 26 LALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPN 85
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ W +IN +A L L + QM +QPN T ++ AC A +H
Sbjct: 86 VFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPA---RAVHSH 142
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++K FG+S GLV + G + AQ+ + +P + L YA+ HG
Sbjct: 143 AIK--FGLSSHLYVSTGLVDAYARGGDVASAQKLFDA-MPERSLVSYTAMLTCYAK-HG 197
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 208/387 (53%), Gaps = 33/387 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ +GV+ + ++ +C + ++VH L+ + D+ + +I MY KCG
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A+RVF + + W+ MI GYA +GLG++ L +F MR G+ P+ T++ +
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALT 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F SM I PG EHY +V +LG+ G + EA I + +P EP
Sbjct: 443 ACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLI-KNMPVEPD 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + ++ + A + +++L+P A P K
Sbjct: 502 AVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKF 561
Query: 486 IPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKALNQMKESTYVPDT 536
I + K S ++ R+ F + + R EKL L + ES Y D
Sbjct: 562 ISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL--LMESGYSADG 619
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
+VLHDID+E K +L YHSER A+AYGL+ P P+R++KNLRVCGDCH+AIK++++I
Sbjct: 620 SFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKI 679
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD RFHHFKDG CSC DYW
Sbjct: 680 TSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 35/259 (13%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
SY + G ++N ++ P D V A L+ CQ G++ EA L D+ K
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVV--AWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 275 ADASCFYT----------------LFELC---GNPKW------YENAKKVHDY--FLQST 307
+ + LFE+ W Y A V D +
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ N ++ +G+ G + A+ VF+ M +R +W MI Y N E L F
Sbjct: 263 PEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFR 322
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M G++PN + +++ + C + ++ +H ++ F + L+ + K
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS--ALITMYIK 380
Query: 427 CGHLFEAQQFIEQKLPFEP 445
CG+L +A++ FEP
Sbjct: 381 CGNLDKAKRVFHT---FEP 396
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 246 LPPSVADLARL----CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHD 301
PPSV L + G + +AI L + + + + L + A+++ D
Sbjct: 108 FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFD 167
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
D+V ++ Y + G +T+AR +FD M R++ SW MI+GYA NG +
Sbjct: 168 EMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNL 223
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+LFE M + NE ++ A+ A +E+A F +M
Sbjct: 224 ARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 208/387 (53%), Gaps = 33/387 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ +GV+ + ++ +C + ++VH L+ + D+ + +I MY KCG
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A+RVF + + W+ MI GYA +GLG++ L +F MR G+ P+ T++ +
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALT 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F SM I PG EHY +V +LG+ G + EA I + +P EP
Sbjct: 443 ACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLI-KNMPVEPD 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + ++ + A + +++L+P A P K
Sbjct: 502 AVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKF 561
Query: 486 IPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKALNQMKESTYVPDT 536
I + K S ++ R+ F + + R EKL L + ES Y D
Sbjct: 562 ISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL--LMESGYSADG 619
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
+VLHDID+E K +L YHSER A+AYGL+ P P+R++KNLRVCGDCH+AIK++++I
Sbjct: 620 SFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKI 679
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD RFHHFKDG CSC DYW
Sbjct: 680 TSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 35/259 (13%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
SY + G ++N ++ P D V A L+ CQ G++ EA L D+ K
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVV--AWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 275 ADASCFYT----------------LFELC---GNPKW------YENAKKVHDY--FLQST 307
+ + LFE+ W Y A V D +
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ N ++ +G+ G + A+ VF+ M +R +W MI Y N E L F
Sbjct: 263 PEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFR 322
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M G++PN + +++ + C + ++ +H ++ F + L+ + K
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS--ALITMYIK 380
Query: 427 CGHLFEAQQFIEQKLPFEP 445
CG+L +A++ FEP
Sbjct: 381 CGNLDKAKRVFHT---FEP 396
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 246 LPPSVADLARL----CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHD 301
PPSV L + G + +AI L + + + + L + A+++ D
Sbjct: 108 FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFD 167
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
D+V ++ Y + G +T+AR +FD M R++ SW MI+GYA NG +
Sbjct: 168 EMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNL 223
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+LFE M + NE ++ A+ A +E+A F +M
Sbjct: 224 ARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 213/363 (58%), Gaps = 29/363 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ ++ C + E K VH + ++S ++ + N +++MY K GS+ DA+RVFD +
Sbjct: 293 YSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV 352
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
+ SW+ M+ G A +GLG E L FEQM ++G++PNE +FL V +AC + ++E
Sbjct: 353 KPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLY 412
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
+FE MK ++ + P HY+ V +LG+ G L A++FI + +P EPTA W AL R+
Sbjct: 413 YFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE-MPIEPTAAVWGALLGACRM 470
Query: 460 HGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAIS 498
H +++L +A E +LDP + P K + KK+ A S
Sbjct: 471 HKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
Query: 499 ILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQAL 552
++ ++ + F +P + K + ++ ++KE YVPDT +VL +DQ+ +E+ L
Sbjct: 531 WVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKL 590
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
YHSE+LA+A+ L++TP +P+RI KN+RVCGDCH AIK +S++V RE+IVRD RFH F
Sbjct: 591 QYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRF 650
Query: 613 KDG 615
+DG
Sbjct: 651 RDG 653
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 252 DLARLCQE--GKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQS-T 307
DL R Q G A++L+ +G + D + + L + C E + VH + + S
Sbjct: 59 DLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF 118
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ LVL N ++ MY KCG + DARR+FD M + M +W +I G++ N + L LF
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFP 178
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM +LG QPN T ++ A GS ++ + ++G LV + +C
Sbjct: 179 QMLRLGFQPNHFTLSSLLKASGSEHGLDPG-TQLHAFCLKYGYQSSVYVGSALVDMYARC 237
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEAL 453
GH+ +A Q +P + W AL
Sbjct: 238 GHM-DAAQLAFDGMPTKSEVS-WNAL 261
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLF 284
L++ ++ P D V A +A Q + ++A+ +++ G + + +L
Sbjct: 139 LDDARRMFDEMPTKDMV--TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
+ G+ + ++H + L+ + + + + +++MY +CG M A+ FD M +S
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFES 403
SW+ +I+G+A G G+ L L +M++ QP T+ +V SAC S A+E+ ++H
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 316
Query: 404 MKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+KS + ++G L+ + K G + +A++ ++ + +P W + HG
Sbjct: 317 IKSGLKLIA----FIGNTLLDMYAKAGSIDDAKRVFDRLV--KPDVVSWNTMLTGCAQHG 370
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 220/395 (55%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDKGVKADAS-CFYT---LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++A++L ++ D C YT CG ++ K++H + +Q G
Sbjct: 409 GFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAG 468
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I MY +CG++ +A +F M + SW+ MI+ +G G E L+LF++M G+
Sbjct: 469 NALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIY 528
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ +FL V +AC + ++E F +FESMK +FGI PG +HY L+ +LG+ G + EA+
Sbjct: 529 PDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD 588
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------- 478
I + +PFEPT WEA+ + R GD++L HA + + + P
Sbjct: 589 LI-KTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAG 647
Query: 479 ---SKADPKKIPTP-PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMK 528
A +K+ KK S ++ +++ F ++P ++ + L+ + +M+
Sbjct: 648 RWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMR 707
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ YVPDT+ VLHD++ KE L HSERLA+ +GL+ P + ++KNLR+C DCH
Sbjct: 708 KLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHA 767
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ MS+ VGRE++VRD +RFHHFKDG+CSCG+YW
Sbjct: 768 VMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 258 QEGKVKEAIELMDKGVK----ADASCFYTLFELCGNPKWYENAKKVHDYF--LQSTI--R 309
G V EA EL + V D F ++ C N ++ + K VH LQ
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L +NN ++ +Y KCG++ ARR+FD+M + + SW+ +++GY ++ D+ +++FE+M
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
NE +++ + S E+A F M++E + P Y G + G+ G
Sbjct: 391 P----YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAE-DVKPCDYTYAGAISACGELGS 445
Query: 430 LFEAQQF 436
L +Q
Sbjct: 446 LKHGKQL 452
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + ++ L+ C + +A+KV D D + ++ Y + G + A
Sbjct: 192 GVLSVSNALVALYMKCEALEATRDARKVLDEMPDK----DALTWTTMVVGYVRRGDVGAA 247
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ + + W+ MI+GY +G+ E +LF +M + +E TF +V SAC +A
Sbjct: 248 RSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANA 307
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 214/392 (54%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK ++ G++ ++S + C + ++VH +S + D +
Sbjct: 179 EDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSL 238
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY KCG + D ++F + R + +W+ MI+GYA +G G + L LF++M + G++P+
Sbjct: 239 ISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDW 298
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+AV AC A + +F SM ++G+ +HY +V +LG+ G L EA IE
Sbjct: 299 ITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIE 358
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
K+PF+P A + L RIH + ++ + A + +++LDP+ A
Sbjct: 359 -KMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWD 417
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD------EKLKALNQMKEST 531
K + + K S ++ KS +FR+ + + + + +MK +
Sbjct: 418 HVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAG 477
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPD + LHD+ +E KEQ LL+HSE+LAIAYGLI P TP+R+ KNLRVCGDCH AIK
Sbjct: 478 YVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIK 537
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S+I RE+IVRD RFHHFKDG CSC DYW
Sbjct: 538 YISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V +I Y K G + A R+F+ M ++++ +W+ MI GY +N ++G++LF M
Sbjct: 131 VVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVG 190
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G+QPN T + C A++ +H KS + T L+ + KCG L
Sbjct: 191 FGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSP--LCDDTTAGTSLISMYCKCGVL 248
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
+ + Q +P + + YA+ HG+
Sbjct: 249 EDGWKLFVQ-VPRRDVVTWNAMISGYAQ-HGE 278
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 216/386 (55%), Gaps = 42/386 (10%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
LM K +K + F ++ C + K++H Y ++ ++ + + +++MY KCG+
Sbjct: 332 LMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN 390
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A+++FD M R M SW MI G A +G + ++LFEQM G++ AV +A
Sbjct: 391 IRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTA 443
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C ++EA+ +F SM +FGI+PG EHY + +LG+ G L EA FI + PT
Sbjct: 444 CSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI-CGMHIGPTG 502
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPS------------------------KADP 483
W L + R+H +ID+ + ++++DP+ +A
Sbjct: 503 SIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASM 562
Query: 484 KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTR 537
++I +K A S ++ K+++ F +P + E ++ L + M++ YVPDT
Sbjct: 563 RRIGI---RKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTS 619
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
V HD+++E K+ + HSERLAI +G+I+TPA +R+ KNLRVC DCH A K +S+IV
Sbjct: 620 EVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIV 679
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE++VRDN RFHHFK+G CSCGDYW
Sbjct: 680 GREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +K D+ ++ L K++H ++ + D+ + + +I+MY KC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ D+ RVF + +R SW+ +I G NGL DEGL+ F QM ++P +F ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 387 ACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
AC + +I I+ LV + KCG++ A+Q ++
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIAS------SLVDMYAKCGNIRTAKQIFDRMR 402
Query: 442 PFEPTAEFWEALRNYARIHG 461
+ + W A+ +HG
Sbjct: 403 LRDMVS--WTAMIMGCALHG 420
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 32/152 (21%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK- 324
I ++ G+ D + F ++ + C + +H Y ++ + DL N ++ MY K
Sbjct: 95 IGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKL 154
Query: 325 ------------CGSMTD-------------------ARRVFDHMADRSMDSWHLMINGY 353
G + D R++F+ M ++ + SW+ +I G
Sbjct: 155 RFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGN 214
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
A NGL +E L++ +M L+P+ T +V
Sbjct: 215 ARNGLYEETLRMIREMGGANLKPDSFTLSSVL 246
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 218/393 (55%), Gaps = 33/393 (8%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L + V+ D C E K +H Y ++ IR D VL +
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCG M +A VF ++ +S+ +W +I+GYA +G G E + F +M+K+G++PN
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF AV +AC +EE + F SM+ ++ + P EHY +V +LG+ G L EA++FI
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFI- 407
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------SKADP 483
Q++P +P A W AL RIH +I+L + E+++ +DP K
Sbjct: 408 QEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWD 467
Query: 484 KKIPTPPPKKRTAISILDGKSRLV------EF-----RNPTLYRDDEKLKAL-NQMKEST 531
K T K ++ + G S + EF +P + + K + + +++E+
Sbjct: 468 KAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENG 527
Query: 532 YVPDTRYVLHD-IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YVP+ +L D +D + +E + HSE+LAI YGLI T T +RI+KNLRVC DCH
Sbjct: 528 YVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVT 587
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I R++++RD RFHHF+DGKCSCGDYW
Sbjct: 588 KLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N VI+ Y K G M A +F MA+++ SW MI+GY + E LQLF +M+ ++
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
P+ + SAC A+E+ +IH K+ + + LG L+ + KCG + E
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRM----DSVLGCVLIDMYAKCGEMEE 300
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A + + + + + W AL + HG
Sbjct: 301 ALEVFKN--IKKKSVQAWTALISGYAYHG 327
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 212/383 (55%), Gaps = 32/383 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKCGSMTD 330
G + + F + C N K++H L+S I + + ++N +I MY KCG++ D
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
ARR+FD MA+ + S + MI GYA +G+ E L LF+ M + + P TF++V SAC
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+EE + +F MK +F I P EHY ++ +LG+ G L EA+ I ++PF P + W
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI-ARMPFNPGSIGW 516
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
+L R HG+I+L A ++ L+PS A P K +
Sbjct: 517 ASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDR 576
Query: 490 PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
KK+ S ++ K R+ F +P + E L+ ++ +MK + YVPD R+ L
Sbjct: 577 GVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKD 636
Query: 544 DQE---AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D KE L +HSE+LA+A+GLIST P+ ++KNLR+CGDCHNAIK +S I GRE
Sbjct: 637 DGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGRE 696
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+ VRD RFH FK+G+CSCGDYW
Sbjct: 697 ITVRDAHRFHCFKEGQCSCGDYW 719
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ +G+ D ++ + + H +++ + + + +I++Y KCG
Sbjct: 230 EMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG 289
Query: 327 S-MTDARRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
M+D R+VF+ + + + W+ M++GY+ N ++ L+ F QM+ +G +PN+ +F+ V
Sbjct: 290 GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCV 349
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQ 439
SAC + + + IH ++KS+ P + L+ + KCG+L +A++ ++
Sbjct: 350 ISACSNLSSPSQGKQIHSLALKSDI---PSNRISVDNALIAMYSKCGNLQDARRLFDR 404
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADN 356
++H + S + +NN ++ YGK G + DA+RVF M R SW+ MI Y +
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G + L LF++M + GL + T +V +A + + + F + G +
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG-LQFHGQLIKTGFHQNSHV 277
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GL+ + KCG + + +++ EP W +
Sbjct: 278 GSGLIDLYSKCGGGMSDCRKVFEEIT-EPDLVLWNTM 313
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR------ 333
F L + C + K +H +++S I +N I +Y KCG + AR+
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 334 -------------------------VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+FD + + + S++ +I+ YAD G L LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
MR++GL + T AV +AC
Sbjct: 131 MREMGLDMDGFTLSAVITAC 150
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 230/423 (54%), Gaps = 41/423 (9%)
Query: 236 MNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPK 291
++ P D V SV + + GK +EA+ E+ KG+K D +L C
Sbjct: 46 FDKMPEKDLVAWNSVIN--GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 103
Query: 292 WYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN 351
K+VH Y ++ + +L +N ++++Y +CG + +A+ +FD M D++ SW +I
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 163
Query: 352 GYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
G A NG G E ++LF+ M GL P E TF+ + AC ++E F +F M+ E+ I
Sbjct: 164 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
P EH+ +V +L + G + +A ++I + +P +P W L +HGD DL + A
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYI-KSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 282
Query: 471 ELMVDLDPSKA-----------------DPKKIPT----PPPKKRTAISILDGKSRLVEF 509
++ L+P+ + D +KI KK S+++ +R+ EF
Sbjct: 283 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 342
Query: 510 --------RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLA 560
++ +Y KLK + +++ YVP V D+++E KE A++YHSE++A
Sbjct: 343 LMGDKSHPQSDAIY---AKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 399
Query: 561 IAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
IA+ LISTP R+P+ ++KNLRVC DCH AIK++S++ RE++VRD RFHHFK+G CSC
Sbjct: 400 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQ 459
Query: 621 DYW 623
DYW
Sbjct: 460 DYW 462
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++S + + N ++ +Y CG + A +VFD M ++ + +W+ +ING+A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
NG +E L L+ +M G++P+ T +++ SAC A+ +H +K G++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNL 124
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKL 441
L+ + +CG + EA+ ++ +
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMV 151
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 206/396 (52%), Gaps = 34/396 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G E++ L DK GV D T+ C A+ + DY + + D++L
Sbjct: 468 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 527
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+M+ KCG + AR +FD M ++++ SW MI Y +G G + L LF M + G+
Sbjct: 528 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 587
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ T +++ AC A +EE F M ++ + +HY +V +LG+ G L EA +
Sbjct: 588 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 647
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
IE + E W A R H D+ L + A +++L P
Sbjct: 648 LIES-MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAG 706
Query: 481 --ADPKKIPTPPPKKR-------TAISILDGKSRLVEFRNPTLYRDDE---KLKAL-NQM 527
D K ++R T I + D KS + T R E LK+L N++
Sbjct: 707 RWEDVAKTRDLMSQRRLKKIPGWTWIEV-DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 765
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
+ YVPDT +VLHD+D+E K L HSE+LAIA+GLI+TP TP+RIIKNLRVCGDCH
Sbjct: 766 ELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCH 825
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I GR +IVRD RFHHFK+G CSCGDYW
Sbjct: 826 TFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK E++ L +K GV D T+ C A+ + DY + + D++L
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + AR +FD M ++++ SW MI Y +G G + L LF M G+
Sbjct: 298 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 357
Query: 376 PNEQTFLAVFSAC 388
P++ T ++ AC
Sbjct: 358 PDKITLASLLYAC 370
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 279 CFYTLFEL--CGNPKWYENAKKVHDYFLQSTIRGDLVLNN---KVIEMYGKCGSMTDARR 333
CF T EL CG + +Y L IR L N +++MY KC + DAR
Sbjct: 163 CFGTFRELIRCG--------ARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARF 214
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+FD M +R + +W +MI GYA+ G +E L LFE+MR+ G+ P++ + V AC A
Sbjct: 215 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 274
Query: 394 IEEAFI---HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ +A I + + K + + GT ++ + KCG + A++ ++
Sbjct: 275 MHKARIIDDYIQRKKFQLDVILGT----AMIDMYAKCGCVESAREIFDR 319
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 260 GKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG---DL 312
G+ ++A++L + G+ D +L C N + ++VH Q+++ G +L
Sbjct: 339 GQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHA---QASVHGMLQNL 395
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ NK++ Y ++ DA +FD M R SW +M+ G+A G F ++ +
Sbjct: 396 IVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRC 455
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G +P+ T CG+A+ E+ + F+ M+ E G+ P + +V K G + +
Sbjct: 456 GARPDNYT----LPFCGNAN---ESLVLFDKMREE-GVVPDKVAMVTVVFACAKLGAMHK 507
Query: 433 AQ 434
A+
Sbjct: 508 AR 509
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 289 NPKWY-------ENAKKVHDYFLQSTIRG---DLVLNNKVIEMYGKCGSMTDARRVFDHM 338
NPK+Y N +V Q+++ G ++V+ NK+I Y ++ DA +FD M
Sbjct: 80 NPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM 139
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
R SW +M+ G+A G F ++ + G +P+ T V AC ++ A
Sbjct: 140 CVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMAL 199
Query: 399 I 399
+
Sbjct: 200 V 200
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 209/375 (55%), Gaps = 32/375 (8%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKCGSMTDARRVFDHM 338
F + C N K++H L+S I + + ++N +I MY KCG++ DARR+FD M
Sbjct: 346 FVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
A+ + S + MI GYA +G+ E L LF+ M + + P TF++V SAC +EE +
Sbjct: 406 AEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGW 465
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+F MK +F I P EHY ++ +LG+ G L EA+ I ++PF P + W +L R
Sbjct: 466 NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI-ARMPFNPGSIGWASLLGACR 524
Query: 459 IHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAI 497
HG+I+L A ++ L+PS A P K + KK+
Sbjct: 525 THGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGC 584
Query: 498 SILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQE---AK 548
S ++ K R+ F +P + E L+ ++ +MK + YVPD R+ L D K
Sbjct: 585 SWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEK 644
Query: 549 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKR 608
E L +HSE+LA+A+GLIST P+ ++KNLR+CGDCHNAIK +S I GRE+ VRD R
Sbjct: 645 EIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHR 704
Query: 609 FHHFKDGKCSCGDYW 623
FH FK+G+CSCGDYW
Sbjct: 705 FHCFKEGQCSCGDYW 719
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ +G+ D ++ + + H +++ + + + +I++Y KCG
Sbjct: 230 EMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG 289
Query: 327 S-MTDARRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
M+D R+VF+ + + + W+ M++GY+ N ++ L+ F QM+ +G +PN+ +F+ V
Sbjct: 290 GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCV 349
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQ 439
SAC + + + IH ++KS+ P + L+ + KCG+L +A++ ++
Sbjct: 350 ISACSNLSSPSQGKQIHSLALKSDI---PSNRISVDNALIAMYSKCGNLQDARRLFDR 404
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADN 356
++H + S + +NN ++ YGK G + DA+RVF M R SW+ MI Y +
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G + L LF++M + GL + T +V +A + + + F + G +
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG-LQFHGQLIKTGFHQNSHV 277
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GL+ + KCG + + +++ EP W +
Sbjct: 278 GSGLIDLYSKCGGGMSDCRKVFEEIT-EPDLVLWNTM 313
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR------ 333
F L + C + K +H +++S I +N I +Y KCG + AR+
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 334 -------------------------VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+FD + + + S++ +I+ YAD G L LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
MR++GL + T AV +AC
Sbjct: 131 MREMGLDMDXFTLSAVITAC 150
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 208/387 (53%), Gaps = 33/387 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ +GV+ + ++ +C + ++VH L+ + D+ + +I MY KCG
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A+RVF + + W+ MI GYA +GLG++ L +F MR G+ P+ T++ +
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALT 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F SM I PG EHY +V +LG+ G + EA I + +P EP
Sbjct: 443 ACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLI-KNMPVEPD 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + ++ + A + +++L+P A P K
Sbjct: 502 AVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKF 561
Query: 486 IPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKLKALNQMKESTYVPDT 536
I + K S ++ R+ F + + R EKL L + ES Y D
Sbjct: 562 ISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL--LMESGYSADG 619
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
+VLHDID+E K +L YHSER A+AYGL+ P P+R++KNLRVCGDCH+AIK++++I
Sbjct: 620 SFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKI 679
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+++RD RFHHFKDG CSC DYW
Sbjct: 680 TSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 246 LPPSVADLARL----CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHD 301
PPSV L + G + +AI L + + + + L + A+++ D
Sbjct: 108 FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFD 167
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
D+V ++ Y + G +T+AR +FD M R++ SW MI+GYA NG +
Sbjct: 168 EMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNL 223
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+LFE M + NE ++ A+ A +E+A F +M
Sbjct: 224 ARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 35/259 (13%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
SY + G ++N ++ P D V A L+ CQ G++ EA L D+ K
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVV--AWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 275 ADASCFYT----------------LFELC---GNPKW------YENAKKVHDY--FLQST 307
+ + LFE+ W Y A V D +
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ N ++ +G+ G + A+ VF+ M +R +W MI Y N E L F
Sbjct: 263 PEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFR 322
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M G++PN + +++ + C + ++ +H ++ F + L+ + K
Sbjct: 323 EMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS--ALITMYIK 380
Query: 427 CGHLFEAQQFIEQKLPFEP 445
CG+L +A++ FEP
Sbjct: 381 CGNLDKAKRVFHT---FEP 396
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 212/384 (55%), Gaps = 29/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G +A + ++F E K VH + ++S + N +++MY K G
Sbjct: 243 EMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSG 302
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DAR+VFD + D+ + +W+ M+ +A GLG E + FE+MRK G+ N+ TFL + +
Sbjct: 303 SMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILT 362
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E +FE MK E+ + P +H++ +V +LG+ G L A FI K+P EPT
Sbjct: 363 ACSHGGLVKEGKRYFEMMK-EYDLEPEIDHFVTVVALLGRAGLLNFALVFI-FKMPIEPT 420
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + + A + + +LDP + P +
Sbjct: 421 AAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRI 480
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--RNPTLYRDDEKLKALNQM----KESTYVPDTRYV 539
+ T KK A S ++ ++ + F + T R +E K Q+ ++ YVPD YV
Sbjct: 481 MKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYV 540
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L +D + +E L YHSE+LA+A+ LI PA +RI+KN+R+CGDCH+A K +S++ GR
Sbjct: 541 LLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGR 600
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFHHF +G CSC DYW
Sbjct: 601 EIVVRDTNRFHHFSNGSCSCADYW 624
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 266 IELMDKGVKADA-SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
++L+D G A ++T C K E+A+KVH + S GD L+N +I +Y K
Sbjct: 39 LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CGS+ +AR+VFD M + M SW +I GYA N + +E + L M K +PN TF ++
Sbjct: 99 CGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 385 FSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
A G+ AD+ IH ++K ++ + Y+G L+ + +CG + A ++
Sbjct: 159 LKAAGAHADSGIGRQIHALAVKCDW----HEDVYVGSALLDMYARCGMMDMATAVFDK 212
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 263 KEAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EAI L M KG K + F +L + G +++H ++ D+ + + +
Sbjct: 134 EEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSAL 193
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY +CG M A VFD + ++ SW+ +I+G+A G G+ L F +M + G +
Sbjct: 194 LDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATH 253
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T+ +VFS+ A+E+ ++H +KS ++ + L+ + K G + +A++
Sbjct: 254 FTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGN--TLLDMYAKSGSMIDARKVF 311
Query: 438 EQ 439
++
Sbjct: 312 DR 313
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 206/396 (52%), Gaps = 34/396 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G E++ L DK GV D T+ C A+ + DY + + D++L
Sbjct: 916 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 975
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+M+ KCG + AR +FD M ++++ SW MI Y +G G + L LF M + G+
Sbjct: 976 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 1035
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ T +++ AC A +EE F M ++ + +HY +V +LG+ G L EA +
Sbjct: 1036 PNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALK 1095
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
I + E W A R H D+ L + A +++L P
Sbjct: 1096 LIXS-MTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAG 1154
Query: 481 --ADPKKIPTPPPKKR-------TAISILDGKSRLVEFRNPTLYRDDE---KLKAL-NQM 527
D KI ++R T I + D KS + T R E LK+L N++
Sbjct: 1155 RWEDVAKIRDLMSQRRLKKIPGWTWIEV-DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 1213
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
+ YVPDT +VLHD+D+E K L HSE+LAIA+GLI+TP TP+RIIKNLRVCGDCH
Sbjct: 1214 ELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCH 1273
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I GR +IVRD RFHHFK+G CSCGDYW
Sbjct: 1274 TFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 173/354 (48%), Gaps = 34/354 (9%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK E++ L +K GV D T+ C A+ + DY + + D++L
Sbjct: 240 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 299
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + AR +FD M ++++ SW MI Y +G G + L LF M G+
Sbjct: 300 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGML 359
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ T ++ AC A +EE F SM ++ + +HY +V +LG+ G L EA +
Sbjct: 360 PDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALK 419
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
I + + E W A R H D+ L + A +++L
Sbjct: 420 LI-KSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAG 478
Query: 481 --ADPKKIPTPPPKKR-------TAISILDGKSRLVEFRNPTLYRDD---EKLKAL-NQM 527
D KI ++R T I + D KS + T R E LK+L N++
Sbjct: 479 RWEDVAKIRDLMSQRRLKKTPGWTWIEV-DNKSHQFSVGDTTHPRSKEIYEMLKSLSNKL 537
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+ YVPDT +VLHD+D+E K L HSE+LAIA+GLI+TP TP+RIIKNLR
Sbjct: 538 ELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ G + D + C + K + + +H + + D + +++MY KC
Sbjct: 150 ELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCR 209
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DAR +FD M +R + +W +MI GYA+ G +E L LFE+MR+ G+ P++ + V
Sbjct: 210 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVF 269
Query: 387 ACGSADAIEEAFI---HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC A+ +A I + + K + + GT ++ + KCG + A++ ++
Sbjct: 270 ACAKLGAMHKARIIDDYIQRKKFQLDVILGT----AMIDMYAKCGCVESAREIFDR 321
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ G + D + C + K + + +H + + D + +++MYGKC
Sbjct: 826 ELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 885
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DAR +FD M +R + +W +MI GYA+ G +E L LF++MR+ G+ P++ + V
Sbjct: 886 EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 945
Query: 387 ACGSADAIEEAFI---HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC A+ +A + + K + + GT ++ + KCG + A++ ++
Sbjct: 946 ACAKLGAMHKARTIDDYIQRKKFQLDVILGT----AMIDMHAKCGCVESAREIFDR 997
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 291 KWY--ENAKKVHDYFLQSTIRG---DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
KW+ N +V Q+++ G +L++ NK++ Y ++ DA +FD M R S
Sbjct: 744 KWFLPTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVS 803
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESM 404
W +M+ G+A G F ++ + G +P+ T V AC ++ IH +
Sbjct: 804 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH--HI 861
Query: 405 KSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQKL 441
+FG+ +H++ LV + GKC + E +F+ K+
Sbjct: 862 VYKFGLD--LDHFVCAALVDMYGKCREI-EDARFLFDKM 897
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 289 NPKWY-------ENAKKVHDYFLQSTIRG---DLVLNNKVIEMYGKCGSMTDARRVFDHM 338
NPK+Y N +V Q+++ G ++V+ NK+I Y ++ DA +FD M
Sbjct: 61 NPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM 120
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA- 397
R SW +M+ G+A G F ++ + G +P+ T V AC ++
Sbjct: 121 CVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGR 180
Query: 398 FIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQKL 441
IH + +FG+ +H++ LV + KC + E +F+ K+
Sbjct: 181 LIH--HIVYKFGLD--LDHFVCAALVDMYVKCREI-EDARFLFDKM 221
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 235/440 (53%), Gaps = 34/440 (7%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK--- 271
S+ + G+ ++ + N+ P ++ + + ++ L Q G +EA++ ++
Sbjct: 361 SWNIILSGYVNVRCMDEAKSFFNEMP--EKNILSWIIMISGLAQIGFAEEALKFFNRMKL 418
Query: 272 -GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
G + F C ++ +++H ++ L N +I MY +CG +
Sbjct: 419 QGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDA 478
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F +M SW+ MI +G G + ++LFE+M K G+ P+ +FL V SAC
Sbjct: 479 AHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSH 538
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A ++E +F+SM + +G++P EHY ++ +L + G EA++ +E +PFEP A W
Sbjct: 539 AGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMES-MPFEPGAPIW 597
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDP--------------------SKADPKKIPTP- 489
EAL RIHG+IDL A E + +L P A +K+
Sbjct: 598 EALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDR 657
Query: 490 PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
KK S ++ ++++ F +P + + L+ L +M++ YVPDT+ VLHD+
Sbjct: 658 GVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDV 717
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ + KE L HSE+LA+AYG + P +R+ KNLR+CGDCHNA K MS++VGRE++V
Sbjct: 718 ESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVV 777
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD KRFHHF+DGKCSCGDYW
Sbjct: 778 RDGKRFHHFRDGKCSCGDYW 797
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR----GD 311
G EA E+ K ++ D F ++ +C N + K++H YFL++
Sbjct: 268 GLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ +NN +I Y KCG + A+ +F+ M +R + SW+++++GY + DE F +M
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMP- 386
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLV---GVLGKCG 428
+ N +++ + S EEA F MK + G P + G + VLG
Sbjct: 387 ---EKNILSWIIMISGLAQIGFAEEALKFFNRMKLQ-GFEPCDYAFAGAIISCSVLGSLK 442
Query: 429 H 429
H
Sbjct: 443 H 443
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y K + A+ + + + +W+ MI+GYA GL E ++F +M +Q +
Sbjct: 229 IITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLD 288
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQ 434
E TF +V S C +A +H +K+ +P + L+ KCG + AQ
Sbjct: 289 EFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQ 348
Query: 435 QFIEQKLP 442
+ I K+P
Sbjct: 349 E-IFNKMP 355
>gi|115473599|ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group]
gi|113611934|dbj|BAF22312.1| Os07g0636900, partial [Oryza sativa Japonica Group]
Length = 352
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 208/355 (58%), Gaps = 32/355 (9%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH + + I DL L +I+MY KCG + A+RVFD M ++ + +W MI G A++G
Sbjct: 1 EVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 60
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
LG E L LF +M G++PN TF+ V AC + E +F SM GI P EHY
Sbjct: 61 LGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 120
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +LG+ GH+ EA+Q I + + FEP W AL RIH ++++ + A + LD
Sbjct: 121 GCMVDLLGRSGHVEEARQLI-RSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLD 179
Query: 478 P-------------SKADPKKIPTPPPK--KRTAISILDGKS------RLVEF------- 509
P ++A+ + K +R I + G+S ++ EF
Sbjct: 180 PLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLH 239
Query: 510 -RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
R+ +YR E++ ++++K++ Y P T VL DID+++KE++L HSE+LAIA+ L++T
Sbjct: 240 PRSKEIYRVLEEM--MDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTT 297
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
PAR+ +RI KNLR C DCH+A+K++S + R+LIVRD RFHHF +G+CSC DYW
Sbjct: 298 PARSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 352
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 220/414 (53%), Gaps = 38/414 (9%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
D VL S+ LA Q G V+EA+ ++ GV+ F +L GN K+
Sbjct: 235 DAVLWNSM--LAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQ 292
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H Y +++ ++ +++ +I+MY KCG++ ARRVF+ + + SW MI GYA +G
Sbjct: 293 LHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGP 352
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
E LFE+M ++PN TFLAV +AC A ++ + +F SM +++G P EH
Sbjct: 353 TTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCA 412
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
L LG+ G L EA FI + + +PT+ W L R+H + L + + + +L+P
Sbjct: 413 ALADTLGRAGDLDEAYNFISE-MKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEP 471
Query: 479 SKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF----RNPT 513
K + KK A S ++ K++L F ++
Sbjct: 472 KSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHP 531
Query: 514 LYRDDEKLKALN----QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
Y D + ALN QM YVP+ VL DI++E K + L HSE+LAI +G+ISTP
Sbjct: 532 WY--DRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTP 589
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T +R++KNLRVC DCH A K +S+IV RE++VRD RFH FKDG CSCGD+W
Sbjct: 590 PGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+F C + K VH Y +++ D+ + + +I+MY C M + +VFD +D
Sbjct: 179 IFAECADIK---RGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 235
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
W+ M+ GYA NG +E L +F +M + G++P TF ++ A G
Sbjct: 236 AVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFG 282
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE---QTFLAVFSAC 388
R+VFD M +R SW+ +I G A++ E L + +M + G P+ T L +F+ C
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183
Query: 389 GSADAIEEAFIHFESMKSEF 408
AD +H ++K+ F
Sbjct: 184 --ADIKRGMVVHGYAIKNGF 201
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 217/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA++L G+ D + F + + N +++H Y ++S +
Sbjct: 419 QNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVF 478
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + +A + FD M +R+ SW+ +I+ YA G +++FE M G
Sbjct: 479 SGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG 538
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P+ TFL+V SAC EE +FE M+ E+GISP EHY ++ LG+ G +
Sbjct: 539 FKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKV 598
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
Q+ + + +PFE W ++ + R HG+ DL A E + + + A P
Sbjct: 599 QEMLGE-MPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAK 657
Query: 484 ----------KKIPTP-PPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQ 526
KKI +K T S ++ K ++ F NP + ++L+ L +
Sbjct: 658 AGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKE 717
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M + Y PDT L +D + K ++L YHSERLAIA+ LI+TP TP+R++KNL C DC
Sbjct: 718 MDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDC 777
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK+MS+IV R++IVRD+ RFHHFKDG CSCGDYW
Sbjct: 778 HSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L + G+ K++H + + + ++ N +I+MY KCG + A+ F +
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA------CGSADA 393
D++ SW MI G NG +E LQLF MR+ GL P+ TF + A G
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ I M S F S L+ + KCG L EA Q ++
Sbjct: 464 LHSYLIRSGHMSSVFSGS-------ALLDMYTKCGCLDEALQTFDE 502
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG EA++L KG+ A F T+ + ++VH ++T ++
Sbjct: 218 KEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVF 276
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+NN +++ Y KC + + +++F M +R S+++MI GYA N L+LF +M+ L
Sbjct: 277 VNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLS 336
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
+ ++ S GS I IH + + G+S +E +G L+ + KCG L
Sbjct: 337 FDRQALPYASLLSVAGSVPHIGIGKQIHAQLVL--LGLS--SEDLVGNALIDMYSKCGML 392
Query: 431 FEAQQ-FIEQKLPFEPTAEFWEAL 453
A+ FI + + T W A+
Sbjct: 393 DAAKTNFINKN---DKTGVSWTAM 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 267 ELMDKGVKADASCFYTLFEL---CGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMY 322
+++ +GV D T+ L G +H + L+ + ++V+ N +++ Y
Sbjct: 126 DMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAY 185
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K G + ARRVF M R +++ M+ G + G E L LF MR+ GL TF
Sbjct: 186 CKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFS 245
Query: 383 AVFS-ACGSAD 392
V + A G D
Sbjct: 246 TVLTVATGVGD 256
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 225/406 (55%), Gaps = 37/406 (9%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + Q G+ EA+ ++ + VK D + ++ +AK +H +++
Sbjct: 408 AMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRN 467
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + +++MY KCG++ AR +FD M++R + +W+ MI+GY +G+G L+LF
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELF 527
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E+M+K ++PN TFL+V SAC + +E F MK + I P +HY +V +LG+
Sbjct: 528 EEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGR 587
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------ 480
G L EA FI Q +P +P + A+ +IH +++ + E + +L+P
Sbjct: 588 AGRLNEAWDFIMQ-MPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVL 646
Query: 481 -ADPKKIPTPPPKK-RTAISILDGKSR------LVEFRNPT---------------LYRD 517
A+ + + K + +S+L R +VE +N +Y
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAF 706
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
EKL + Q+KE+ YVPDT +L ++ + KEQ L HSE+LAI++GL++T A T + +
Sbjct: 707 LEKL--ICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVR 763
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVC DCHNA K +S + GRE+IVRD +RFHHFK+G CSCGDYW
Sbjct: 764 KNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K + + D V+ F L ++CG+ K++H ++S DL + M
Sbjct: 120 LKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KC + +AR+VFD M +R + SW+ ++ GY+ NG+ L++ M + L+P+ T
Sbjct: 180 YAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITI 239
Query: 382 LAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
++V A + I IH +M++ G LV + KCG L A+ +
Sbjct: 240 VSVLPAVSALRLIRIGKEIHGYAMRA--GFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 441 L 441
L
Sbjct: 298 L 298
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + A+E++ ++ +K ++ + K++H Y +++ +
Sbjct: 213 QNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN 272
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCGS+ AR +FD M +R++ SW+ MI+ Y N E + +F++M G
Sbjct: 273 IATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG 332
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF 408
++P + + + AC +E FIH S++ E
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELEL 368
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 263 KEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ +++D+GVK C + E + +H ++ + ++ + N +
Sbjct: 319 KEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSL 378
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY KC + A +F + R++ SW+ MI G+A NG E L F QM+ ++P+
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDT 438
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T+++V +A A +IH M++ + LV + KCG + A+
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRN--CLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
+ + E W A+ + HG
Sbjct: 497 D--MMSERHVTTWNAMIDGYGTHG 518
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ K++ ++ + GS+ +A RVF+ + + ++ M+ G+A D+ L+ F +MR
Sbjct: 70 LFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD 129
Query: 373 GLQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++P F + CG A+ IH +KS G S GL + KC +
Sbjct: 130 EVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS--GFSLDLFAMTGLENMYAKCRQVH 187
Query: 432 EAQQFIEQ 439
EA++ ++
Sbjct: 188 EARKVFDR 195
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 217/394 (55%), Gaps = 33/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E + + E+ G A + ++F E + VH + ++S + + N +
Sbjct: 246 ETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTI 305
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY K GSM DAR+VFD + R + +W+ M+ +A GLG E + FE++RK G+Q N+
Sbjct: 306 LGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQ 365
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TFL+V +AC ++E +F+ MK ++ + P +HY+ V +LG+ G L EA F+
Sbjct: 366 ITFLSVLTACSHGGLVKEGKQYFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLKEALIFV- 423
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
K+P EPTA W AL R+H + + +A + + +LDP P
Sbjct: 424 FKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWD 483
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
K + KK A S ++ ++ + F ++ +YR E++ ++K+
Sbjct: 484 DAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVN--TRIKK 541
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVP+T YVL I ++ +E L YHSE++A+A+ LI+ PA +RI+KN+R+CGDCH+A
Sbjct: 542 AGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSA 601
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ +S + RE++VRD RFHHF +G CSCGDYW
Sbjct: 602 FRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++++ C K A+ +H + +S + GD L N +I MY KCG+++DAR VFD +
Sbjct: 65 YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
R + SW +I GYA N + E L L M + +P+ TF + A G+
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGA 175
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H ++ + D+ + + +++MY +C M A RVFD + ++ SW+ +I G+A
Sbjct: 183 EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARK 242
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
G G+ L F +M++ G T+ +VFSA A+E+ ++H +KS ++
Sbjct: 243 GDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVA 302
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
+ ++G+ K G + +A++ ++
Sbjct: 303 N--TILGMYAKSGSMVDARKVFDR 324
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 210/384 (54%), Gaps = 29/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D GVK D F + +C E+AK+ H ++ D+V N ++++Y K G
Sbjct: 323 EMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA+ VFD M +++ SW+ +I GY ++G G E +++FE+M G+ PN TFLAV S
Sbjct: 383 RIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + + FESM + I P HY ++ +LG+ G L EA I+ PF+PT
Sbjct: 443 ACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDA-PFKPT 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPP 491
W AL R+H + +L A E + + P K +
Sbjct: 502 VNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQT 561
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKA------------LNQMKESTYVPDTRYV 539
KR + +L S + + P + +K A + ++ + YVP +++
Sbjct: 562 LKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFL 621
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L D+D E +E+ LLYHSE+LAIA+GLI+T TPL+I+++ R+CGDCH+AIK+++ + R
Sbjct: 622 LPDVD-EQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRR 680
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFHHFKDG CSCGDYW
Sbjct: 681 EIVVRDASRFHHFKDGSCSCGDYW 704
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 264 EAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EA+EL ++ D+ + L C K KKV +Y + S + D L N+V
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ M+ KCG M DARR+FD M ++++ SW+ +I G D G E +LF M +
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ F+ + A I +H S+K+ G+ L+ + KCG + +AQ
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKT--GVGGDVFVACALIDMYSKCGSIEDAQCVF 290
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
+Q +P E T W ++ +HG
Sbjct: 291 DQ-MP-EKTTVGWNSIIAGYALHG 312
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
A + F T+ +++H L++ + GD+ + +I+MY KCGS+ DA+ V
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
FD M +++ W+ +I GYA +G +E L ++ +MR G++ + TF + C ++
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349
Query: 395 EEA 397
E A
Sbjct: 350 EHA 352
>gi|297823223|ref|XP_002879494.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325333|gb|EFH55753.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 212/395 (53%), Gaps = 36/395 (9%)
Query: 256 LCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
LC+E K++EA+E++D G D L +LCG + E A+ VHD R
Sbjct: 88 LCEEVKIREALEVVDILEDNGYVVDFPRILGLAKLCGEVEALEEARVVHDCITPLDARS- 146
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ VIEMY CGS DA +VFD M +R+ ++W +M+ A NG G+ + +F ++
Sbjct: 147 ---YHTVIEMYSGCGSTYDALKVFDEMPERNSETWCIMMRCLAKNGEGERAVDMFTSFKE 203
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G +P+++ F AVF AC S I E +HFESM +GI P E Y+ + +L CGHL
Sbjct: 204 EGNKPDKEIFKAVFFACVSLGDINEGLLHFESMYRNYGIIPCMEDYVIVTEMLAACGHLD 263
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
EA +F+E ++ EP+ E WE L N +HGD++L D EL+ LD S+ + +
Sbjct: 264 EALEFVE-RMTVEPSVEMWETLMNLCWVHGDLELGDRFAELVKKLDASRMNKESNAGLVA 322
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKALN-----------------------QMK 528
K + + K +L E R + RDD KL+ QM
Sbjct: 323 AKESDST----KEKLKELRYCQMMRDDPKLRICQFRAGDTSHRKNDETVAALRSLKVQML 378
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ + P TR L +++E KE+ LL+ S +LA AY L+ + AR P + +++R C D HN
Sbjct: 379 DMGFFPATRVCLEKVEKEEKEEQLLFRSNKLAFAYALLHSKARKPFTVTQDMRTCIDGHN 438
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I GREL RD KRFHH+++G CSC DYW
Sbjct: 439 TFKMISLITGRELTQRDQKRFHHYRNGVCSCRDYW 473
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 215/386 (55%), Gaps = 33/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G +A + ++F E K VH + ++S R + N +++MY K G
Sbjct: 132 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 191
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DAR+VFDH+ + + +W+ M+ +A GLG E + FE+MRK G+ N+ TFL++ +
Sbjct: 192 SMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 251
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E +F+ MK E + P +HY+ +V +LG+ G L +A FI K+P +PT
Sbjct: 252 ACSHGGLVKEGKQYFDMMK-EHNLEPEIDHYVTVVDLLGRAGLLNDALVFI-FKMPMKPT 309
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + + A + + +LDP P K
Sbjct: 310 AAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKM 369
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK A S ++ ++ + F R+ +Y+ E++ Q++++ YVP+T
Sbjct: 370 MKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISI--QIRKAGYVPNTD 427
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YVL +D++ ++ L YHSE++A+A+ LI+ P +RI+KN+R+CGDCH+A + +S++
Sbjct: 428 YVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVF 487
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD RFHHF G CSCGDYW
Sbjct: 488 EREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L + G +++H ++ D+ + + +++MY +CG M A VFD +
Sbjct: 44 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE 103
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
++ SW+ +I G+A G G+ L +F +M++ G + T+ +VFSA A+E+ +
Sbjct: 104 SKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKW 163
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
+H +KS +S ++G ++ + K G + +A++ +
Sbjct: 164 VHAHMIKSGERLSA----FVGNTILDMYAKSGSMIDARKVFDH 202
>gi|297834310|ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330877|gb|EFH61296.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 200/362 (55%), Gaps = 26/362 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
T+ C K++H L+S + D+ L N +++MYGKCG + +RRVFD M +
Sbjct: 335 TILPACSRVAALITGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGDVEYSRRVFDGMLTK 394
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ +W+ ++N YA NG +E + LFE M + G+ P+ TF+A+ S C E F
Sbjct: 395 DLTTWNTILNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGISLF 454
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
E MK+EF +SP EHY LV +LG+ G + EA + IE +PF+P+A W +L N R+HG
Sbjct: 455 ERMKTEFRVSPALEHYACLVDILGRAGKIEEAVKVIET-MPFKPSASIWGSLLNSCRLHG 513
Query: 462 DIDLEDHAEELMVDLDPSKADP--------KKIPTPPPKKRTAISILDGKSRL------- 506
++ + + L + ++A + + KK S + K ++
Sbjct: 514 NVSVGEIGTMLWLRTYIAEAKMWDNVDKIREMMKQRGIKKEAGCSWVQVKDKIQIFVAGG 573
Query: 507 -VEFRNPTLYRDDEKLKALNQMKE----STYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
EFRN DE K +++E S Y PDT VLHD+D+E K + HSERLA
Sbjct: 574 GYEFRNS-----DEYKKVWTELQEAIEKSGYSPDTSVVLHDVDEETKANWVCGHSERLAA 628
Query: 562 AYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGD 621
Y LI T P+R+ KNLRVC DCH+ +KI+S++ GR +++RD KRFHHF G CSC D
Sbjct: 629 TYSLIHTGEGVPVRVTKNLRVCADCHSWMKIVSQVTGRVIVLRDTKRFHHFVAGICSCKD 688
Query: 622 YW 623
YW
Sbjct: 689 YW 690
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + K + +H ++ + D V+ N ++++Y + GS DAR+VFD M++R++ +W
Sbjct: 239 CVDLKDLRVGRGIHGQIVKRKEKVDQVVYNVLLKLYMERGSFDDARKVFDGMSERNIVTW 298
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA-IEEAFIHFESMK 405
+ +I+ + E LF +M++ + + T + AC A I IH + +K
Sbjct: 299 NSLISILSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALITGKEIHAQILK 358
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
S+ P L+ + GKCG + +++ + L + T W + N I+G+I+
Sbjct: 359 SKE--KPDVPLLNSLMDMYGKCGDVEYSRRVFDGMLTKDLTT--WNTILNCYAINGNIEE 414
Query: 466 EDHAEELMVD 475
+ E M++
Sbjct: 415 VINLFEWMIE 424
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 256 LCQEGKVKEAIELMDKGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQS-TIR 309
LC+ K+ EA+ L++K + ++ + L C + K + K+ L + ++R
Sbjct: 98 LCKSTKLDEAVTLIEKSSTSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLVLNNPSLR 157
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS---WHLMINGYADNGLGDEGLQLF 366
D L +K+I ++ C + AR++FD + D S+ + W M GY+ NG + L ++
Sbjct: 158 HDPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY 217
Query: 367 EQMRKLGLQPNEQTFLAVFSAC 388
M ++P + AC
Sbjct: 218 VDMLCSFIEPGNFSISVALKAC 239
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 236/462 (51%), Gaps = 56/462 (12%)
Query: 212 ARNSYQQVSPGHQIPNQL--NNVPNNMNQCPAGDQVLPP-------SVAD----LARLCQ 258
R + QV + P+Q+ N + QC ++VL +VA ++ +
Sbjct: 49 GRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVK 108
Query: 259 EGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
E K+ EA+++ + G+ T+ +C + K++H ++S R D+++
Sbjct: 109 EDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLV 168
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +++MY KCG + RR+FD M + + SW+ M+ GYA NG + LF +M G+
Sbjct: 169 LNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGI 228
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+P++ TF+A+ S C A E+ F M+ +FG+SP EHY LV +LG+ G + +A
Sbjct: 229 RPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRI-DAA 287
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------- 478
+ + +P + + W +L N R+H ++ L + + +L+P
Sbjct: 288 LVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANA 347
Query: 479 -----SKADPKKIPTPPPKKRTAISILDGKSRL--------VEFRNPTLYRDDEKLKALN 525
+ + T +K S + K+++ EFRN DE K N
Sbjct: 348 GMWDSVNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNS-----DEYKKIWN 402
Query: 526 QMKEST----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+++E+ Y+P+T VLHD+++E K + HSERLA + LI T A P+RI KNLR
Sbjct: 403 KLREAMEEFGYIPNTDVVLHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLR 462
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH+ IKI+SR+ GR +++RD RFHHFK+G CSC DYW
Sbjct: 463 VCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G ++EA +E++ ++ F T + C + + + VH ++S+ D V
Sbjct: 7 KNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPDQV 66
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+NN ++ +Y +C + +VFD M +R++ SW+ +I+G+ E L +F +M++ G
Sbjct: 67 VNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQREG 126
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + T + C A+ IH + +KS P LV + KCG
Sbjct: 127 MGFSWVTLTTILPICARVTALLSGKEIHAQIVKS--ARRPDVLVLNSLVDMYVKCG 180
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 207/394 (52%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K +E++ KG+ D +L C + YE K+VH + ++ D+ N +
Sbjct: 487 EDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNAL 546
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ Y KCGS+ DA F + ++ + SW MI G A +G G L +F +M + PN
Sbjct: 547 VYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T +V AC A ++EA +F SMK FGI EHY ++ +LG+ G L +A + +
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELV- 665
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PF+ A W AL +R+H D +L A E + L+P K+
Sbjct: 666 NSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWD 725
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
K + KK A+S ++ K ++ F R +Y ++L L M +
Sbjct: 726 DVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDL--MTK 783
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVP+ LHD+D+ KE L +HSERLA+A+ LISTPA P+R+ KNLR+C DCH A
Sbjct: 784 AGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAA 843
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S IV RE+I+RD RFHHF+DG CSC DYW
Sbjct: 844 FKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 7/224 (3%)
Query: 260 GKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G + A+EL+ G+ + ++ + C + +++H + +++ D +
Sbjct: 282 GHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIA 341
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY K G + DA++VFD + R + W+ +I+G + E L LF +MRK G
Sbjct: 342 FGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFD 401
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N T AV + S +AI + ++ + G + GL+ KC L A +
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTR-QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYR 460
Query: 436 FIEQKLPFEPTAEFWEALRNYARI-HGDIDLEDHAEELMVDLDP 478
E+ ++ A F + ++ HG+ ++ E L LDP
Sbjct: 461 VFEKHGSYDIIA-FTSMITALSQCDHGEDAIKLFMEMLRKGLDP 503
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADN 356
++H + + + GD+ + N ++ MYG G + +AR VFD +R+ SW+ +++ Y N
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTE 415
+++F +M G+QPNE F V +AC GS D +H +++ + T
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+ LV + K G + A + K+P E W A + +HG + HA EL++
Sbjct: 241 N--ALVDMYSKLGDIRMA-AVVFGKVP-ETDVVSWNAFISGCVLHGH---DQHALELLLQ 293
Query: 476 LDPSKADPKKIPTPPPKKRTA 496
+ S P K A
Sbjct: 294 MKSSGLVPNVFTLSSILKACA 314
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
VK E++ GV+ + F + C + E +KVH +++ D+ N +++M
Sbjct: 187 VKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDM 246
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y K G + A VF + + + SW+ I+G +G L+L QM+ GL PN T
Sbjct: 247 YSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Query: 382 LAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIE 438
++ AC + A IH +K+ + +++Y+ GLV + K G L +A++ +
Sbjct: 307 SSILKACAGSGAFNLGRQIHGFMVKA----NADSDNYIAFGLVDMYAKHGLLDDAKKVFD 362
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + L+S + V N ++ Y KC ARRVFD + D SW ++ Y++N +
Sbjct: 26 IHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAM 83
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ L F MR ++ NE V + DA +H +M + G +
Sbjct: 84 PRDALGAFRSMRSCSVRCNEFVLPVVLKC--APDAGFGTQLHALAMATGLGGDIFVAN-- 139
Query: 419 GLVGVLGKCGHLFEAQQFIEQ 439
LV + G G + EA+ ++
Sbjct: 140 ALVAMYGGFGFVDEARMVFDE 160
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ ++VH + D + N +I+ Y KC + A RVF+ + ++ MI +
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG 413
G++ ++LF +M + GL P+ ++ +AC S A E+ +H +K +F
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF----M 537
Query: 414 TEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ + G LV KCG + E LP E W A+ HG
Sbjct: 538 SDVFAGNALVYTYAKCGSI-EDADLAFSGLP-EKGVVSWSAMIGGLAQHG 585
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 221/404 (54%), Gaps = 34/404 (8%)
Query: 250 VADLARLCQ-EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A AR E + + E+ G A + ++F E + VH + ++S
Sbjct: 234 IAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQ 293
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N ++ MY K GSM DAR+VFD M R + +W+ M+ A GLG E + FE+
Sbjct: 294 KLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEE 353
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+RK G+Q N+ TFL+V +AC ++E +F+ MK ++ + P +HY+ V +LG+ G
Sbjct: 354 IRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAG 412
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
L EA F+ K+P EPTA W AL R+H + + +A + + +LDP P
Sbjct: 413 LLKEALIFV-FKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLY 471
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDE 519
K + KK A S + ++ + F ++ +YR E
Sbjct: 472 NIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWE 531
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ ++K++ YVP+T +VL I+++ +E L YHSE++A+A+ LI+ PA +RI+KN
Sbjct: 532 EINM--RIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKN 589
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+R+CGDCH+A K +S++ RE++VRD RFHHF +G CSCGDYW
Sbjct: 590 IRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++++ C K A+ +H + +S + GD L N +I MY KCG+++DAR VFD M
Sbjct: 63 YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
R + SW +I GYA N + E + L M + +PN TF ++ A G+
Sbjct: 123 SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGA 173
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 264 EAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EAI L+ ++A + F +L + G +++H ++ D+ + + ++
Sbjct: 144 EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALL 203
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +C M A VFD + ++ SW+ +I G+A G+ L F +M++ G
Sbjct: 204 DMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHF 263
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T+ ++FSA A+E+ ++H +KS ++ ++G ++G+ K G + +A++
Sbjct: 264 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTA----FVGNTMLGMYAKSGSMVDARKV 319
Query: 437 IEQ 439
++
Sbjct: 320 FDR 322
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 214/392 (54%), Gaps = 29/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E + E++ G +A + ++F E K VH + ++S + + N +
Sbjct: 235 ESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTL 294
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY K GSM DAR+VFD + ++ + +W+ M+ +A GLG E + FE+MRK G+ N+
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQ 354
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TFL + +AC ++E +FE MK E+ + P +HY+ +V +LG+ G L A FI
Sbjct: 355 ITFLCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHYVTVVALLGRAGLLNYALVFI- 412
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
K+P EPTA W AL R+H + + A + + +LDP + P
Sbjct: 413 FKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWD 472
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF-RNPTLYRDDEKLKAL-----NQMKEST 531
+ T KK A S ++ ++ + F N + E++ + ++++
Sbjct: 473 AAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEG 532
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPD YVL +D + KE L YHSE+LA+A+ LI PA +RI+KN+R+CGDCH+A K
Sbjct: 533 YVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFK 592
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S++ GRE++VRD RFHHF G CSCGDYW
Sbjct: 593 YISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 266 IELMDKGVKADASCFY-TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
++L+D G A Y + C K E+A+K+H + S GD L+N +I MY K
Sbjct: 39 LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
C S+ DAR VFD M + M SW +I GYA N + E + L M K +PN TF ++
Sbjct: 99 CRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 385 FSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
A G+ AD+ IH ++K + + Y+G L+ + +CG + A ++
Sbjct: 159 LKAAGAYADSGTGRQIHALAVKCGW----HEDVYVGSALLDMYARCGKMDMATAVFDK 212
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 264 EAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EAI L M KG K + F +L + G +++H ++ D+ + + ++
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALL 194
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +CG M A VFD + ++ SW+ +I+G+A G G+ L F +M + G +
Sbjct: 195 DMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHF 254
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T+ +VFS+ A+E+ ++H +KS ++ ++G L+ + K G + +A++
Sbjct: 255 TYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTA----FVGNTLLDMYAKSGSMIDARKV 310
Query: 437 IEQ 439
++
Sbjct: 311 FDR 313
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 220/404 (54%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G+ +EA+++ +GVK + + C + + ++ + VH Y +
Sbjct: 214 AMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERY 273
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+R + L +++MY KCG++ A +VF M +R++ +W I G A NG G+E L LF
Sbjct: 274 KVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLF 333
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M++ G+QPN TF++V C +EE HF+SM++ +GI P EHY +V + G+
Sbjct: 334 NDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGR 393
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD-----------IDLEDHAEELMVD 475
G L EA FI +P P W AL + R++ + ++LED + V
Sbjct: 394 AGRLKEALNFI-NSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVL 452
Query: 476 LDPSKADPK----------KIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
L AD K + KK S+++ + EF +P + K
Sbjct: 453 LSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMK 512
Query: 521 LKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L+ +++ ++ S YV +T VL DI++E KE AL HSE++AIA+GLIS P+R++ N
Sbjct: 513 LEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMN 572
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR+C DCHN K++S+I RE+IVRD RFHHFKDG+CSC DYW
Sbjct: 573 LRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H+ F + DLV ++ KCG + AR++FD M +R +W+ MI GYA G
Sbjct: 167 HNVF-DGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRS 225
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEH 416
E L +F M+ G++ NE + + V SAC ++ ++H E K ++ GT
Sbjct: 226 REALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGT-- 283
Query: 417 YLGLVGVLGKCGHLFEAQQ 435
LV + KCG++ A Q
Sbjct: 284 --ALVDMYAKCGNVDRAMQ 300
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 211/394 (53%), Gaps = 29/394 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K +E+ + AD++ + ++ C N K++H ++S ++ +
Sbjct: 423 HEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSA 482
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++MY KCGS+ +A ++F M R+ SW+ +I+ YA NG G L+ FEQM GLQPN
Sbjct: 483 LVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPN 542
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+FL++ AC +EE +F SM + + P EHY +V +L + G EA++ +
Sbjct: 543 SVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLM 602
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL--------------------- 476
++PFEP W ++ N RIH + +L A + + ++
Sbjct: 603 -ARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGE 661
Query: 477 -DPSKADPKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKE 529
D K + +K A S ++ K + F +P KL L QM+E
Sbjct: 662 WDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEE 721
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y PD+ LH++D+E K ++L YHSER+AIA+ LISTP +P+ ++KNLR C DCH A
Sbjct: 722 QGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAA 781
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S+IV RE+ VRD+ RFHHF DG CSC DYW
Sbjct: 782 IKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F TL + N E +++H + + ++++ N +++MY KC +A R+F +A
Sbjct: 344 FATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLA 403
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+S W +I+GY GL ++GL+LF +M + + + T+ ++ AC + ++
Sbjct: 404 HQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQ 463
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+H ++S G LV + KCG + EA Q Q++P + W AL +
Sbjct: 464 LHSRIIRS--GCLSNVFSGSALVDMYAKCGSIKEALQMF-QEMPVRNSVS-WNALISAYA 519
Query: 459 IHGD 462
+GD
Sbjct: 520 QNGD 523
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
A +C+ G V + I L A +T FE +VH + ++ L
Sbjct: 127 FADMCRHGMVPDHITL------ATLLSGFTEFES------VNEVAQVHGHVVKVGYDSTL 174
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N +++ Y K S+ A +F HMA++ +++ ++ GY+ G + + LF +M+ L
Sbjct: 175 MVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDL 234
Query: 373 GLQPNEQTFLAVFSACGSADAIE 395
G +P+E TF AV +A D IE
Sbjct: 235 GFRPSEFTFAAVLTAGIQMDDIE 257
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ N +I Y K G+++ AR +FD M RS+ +W ++I GYA + E LF M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
+ G+ P+ T + S +++ E
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEV 158
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E ++VH + ++ ++ + N +++ Y K + +AR++F M + S++++I
Sbjct: 257 EFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCC 316
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP 412
A NG +E L+LF +++ + F + S ++ +E IH +++ ++
Sbjct: 317 AWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTD----A 372
Query: 413 GTEHYLG--LVGVLGKCGHLFEAQQFI 437
+E +G LV + KC EA +
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIF 399
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 220/402 (54%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G ++A++L ++ G + + F C EN +++H +
Sbjct: 397 ISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGH 456
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
L + N +I MY +CG + AR +F M SW+ MI +G G + ++L+EQ
Sbjct: 457 DSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQ 516
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M K G+ P+ +TFL V SAC A +EE +F SM +GI+PG +HY ++ + + G
Sbjct: 517 MLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAG 576
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
+A+ I+ +PFE A WEAL R HG++DL A E + L P
Sbjct: 577 KFSDAKNVIDS-MPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLS 635
Query: 479 ----------SKADPKKIPTP-PPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLK 522
A +K+ KK A S + ++++ F +P + L+
Sbjct: 636 NMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLE 695
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
LN +MK+ Y+PDT+YVLHD++ E KE AL HSE+LA+A+GL+ P +R+ KNLR
Sbjct: 696 KLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLR 755
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCHNAIK MS++VGRE++VRD KRFHHFK+G+CSC +YW
Sbjct: 756 ICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 53/229 (23%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD---- 311
G ++A+ L K GV+ D S + ++ C + ++ K+VH Y L++ + D
Sbjct: 268 GLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFL 327
Query: 312 LVLNNKVIEMYGKCGSMTDARRVF-------------------------------DHMAD 340
L + N +I +Y K G + AR++F M +
Sbjct: 328 LSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPE 387
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA--- 397
+++ +W +MI+G A NG G++ L+LF QM+ G +PN+ F +AC A+E
Sbjct: 388 KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQL 447
Query: 398 ---FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
+H + + +S G ++ + +CG + EA + + +PF
Sbjct: 448 HAQIVH---LGHDSTLSVGN----AMITMYARCG-IVEAARTMFLTMPF 488
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y + G +T AR + D M ++ +W+ MI+GY +GL ++ L LF +MR LG+Q +
Sbjct: 229 LITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVD 288
Query: 378 EQTFLAVFSACG 389
E T+ +V SAC
Sbjct: 289 ESTYTSVISACA 300
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D++ +I Y G++ AR +F+ + R ++ MI GY+ G ++LF
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 369 MRKLGLQPNEQTFLAVFSA 387
MR QP++ TF +V SA
Sbjct: 138 MRWANFQPDDFTFASVLSA 156
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 210/384 (54%), Gaps = 29/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D GVK D F + +C E+AK+ H ++ D+V N ++++Y K G
Sbjct: 323 EMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA+ VFD M +++ SW+ +I GY ++G G E +++FE+M G+ PN TFLAV S
Sbjct: 383 RIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + + FESM + I P HY ++ +LG+ G L EA I+ PF+PT
Sbjct: 443 ACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDA-PFKPT 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPP 491
W AL R+H + +L A E + + P K +
Sbjct: 502 VNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQT 561
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKA------------LNQMKESTYVPDTRYV 539
KR + +L S + + P + +K A + ++ + YVP +++
Sbjct: 562 LKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFL 621
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L D+D E +E+ LLYHSE+LAIA+GLI+T TPL+I+++ R+CGDCH+AIK+++ + R
Sbjct: 622 LPDVD-EQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRR 680
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFHHFKDG CSCGDYW
Sbjct: 681 EIVVRDASRFHHFKDGSCSCGDYW 704
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 264 EAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EA+EL ++ D+ + L C K KKV +Y + S + D L N+V
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ M+ KCG M DARR+FD M ++++ SW+ +I G D G E +LF M +
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ F+ + A I +H S+K+ G+ L+ + KCG + +AQ
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKT--GVGGDVFVACALIDMYSKCGSIEDAQCVF 290
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
+Q +P E T W ++ +HG
Sbjct: 291 DQ-MP-EKTTVGWNSIIAGYALHG 312
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
A + F T+ +++H L++ + GD+ + +I+MY KCGS+ DA+ V
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
FD M +++ W+ +I GYA +G +E L ++ +MR G++ + TF + C ++
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349
Query: 395 EEA 397
E A
Sbjct: 350 EHA 352
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 217/384 (56%), Gaps = 29/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ + VK D + ++ +AK +H ++S + ++ + +++MY KCG
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ AR +FD M++R + +W+ MI+GY +G G L+LFE+M+K ++PN TFL+V S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + +E F MK + I +HY +V +LG+ G L EA FI Q +P +P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ-MPVKPA 606
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-------ADPKKIPTPPPKK-RTAIS 498
+ A+ +IH +++ + A E + +L+P A+ + + K + +S
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 499 ILDGKSR------LVEFRN--------PTLYRDDEKL-----KALNQMKESTYVPDTRYV 539
+L R +VE +N T + D +K+ K + +KE+ YVPDT V
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV 726
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L ++ + KEQ L HSE+LAI++GL++T A T + + KNLRVC DCHNA K +S + GR
Sbjct: 727 L-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGR 785
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD +RFHHFK+G CSCGDYW
Sbjct: 786 EIVVRDMQRFHHFKNGACSCGDYW 809
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L ++CG+ K++H ++S DL + MY KC + +AR+VFD M
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+R + SW+ ++ GY+ NG+ L++ + M + L+P+ T ++V A + I
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
IH +M+S G LV + KCG L A+Q + L
Sbjct: 258 IHGYAMRS--GFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTL 283
Q+N ++ P D V ++ +A Q G + A+E++ ++ +K ++
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTI--VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSV 242
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ K++H Y ++S + ++ +++MY KCGS+ AR++FD M +R++
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFE 402
SW+ MI+ Y N E + +F++M G++P + + + AC +E FIH
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH-- 360
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKC 427
+ E G+ L+ + KC
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKC 385
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 263 KEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ +++D+GVK C + E + +H ++ + ++ + N +
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL 378
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY KC + A +F + R++ SW+ MI G+A NG + L F QMR ++P+
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 438
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T+++V +A A +IH M+S + LV + KCG + A+
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRS--CLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
+ + E W A+ + HG
Sbjct: 497 D--MMSERHVTTWNAMIDGYGTHG 518
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K++ ++ + GS+ +A RVF+ + + +H M+ G+A D+ LQ F +MR ++
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 376 PNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P F + CG A+ IH +KS G S GL + KC + EA+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS--GFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 435 QFIEQ 439
+ ++
Sbjct: 191 KVFDR 195
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 216/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA++L G++ D + F ++ + + +++H Y ++S + +
Sbjct: 613 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 672
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + +A R FD M +R+ SW+ +I+ YA G +++FE M G
Sbjct: 673 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 732
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TFL+V +AC +E +F MK ++ ISP EHY ++ LG+ G +
Sbjct: 733 FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 792
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
Q+ + + +PF+ W ++ + RIHG+ +L A + + ++P+ A P
Sbjct: 793 QKMLVE-MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYAR 851
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR------DDEKLKALNQ 526
K + +K + S ++ K ++ F + L DE + +
Sbjct: 852 AGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKE 911
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M + Y PD LH +D E K ++L YHSERLAIA+ L++TPA TP+RI+KNL C DC
Sbjct: 912 MDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDC 971
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H IK++S+IV R++IVRD++RFHHFKDG CSCGDYW
Sbjct: 972 HAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ T+ + G+ K++H + + + +L N +I+MY KCG + A+ F + +
Sbjct: 538 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 597
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
++S SW +I GY NG +E LQLF MR+ GL+P+ TF ++ A S I
Sbjct: 598 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 657
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+H ++S + S + LV + KCG L EA + ++
Sbjct: 658 LHSYLIRSGYKSSVFSGSV--LVDMYAKCGCLDEALRTFDE 696
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ST ++ +NN +++ Y KC + D RR+FD M +R S++++I YA N L+
Sbjct: 462 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 521
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVG 422
LF +M+KLG + + S GS + + I + + +E LG L+
Sbjct: 522 LFREMQKLGFDRQVLPYATMLSVAGS---LPDVHIGKQIHAQLVLLGLASEDLLGNALID 578
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD 482
+ KCG L A+ + E +A W AL I G + H E L + D +A
Sbjct: 579 MYSKCGMLDAAKSNFSNR--SEKSAISWTAL-----ITGYVQNGQHEEALQLFSDMRRAG 631
Query: 483 PKKIPTPPPKKRTAISILDGKSRL 506
+ P + T SI+ S L
Sbjct: 632 LR------PDRATFSSIIKASSSL 649
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 260 GKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +A+ L + +GV D T+ L G +H + ++ + + +
Sbjct: 333 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC-----TVPSLHPFAIKFGLDTHVFVC 387
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N +++ Y K G + ARRVF M D+ +++ M+ G + GL + LQLF MR+ G
Sbjct: 388 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 445
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 220/399 (55%), Gaps = 35/399 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +E+I L M+ G + D++ +L C + +HDY + ++V
Sbjct: 267 QNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVV 326
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I MY +CG+++ AR VFD M +R++ +W MI+GY +G G + ++LF +MR G
Sbjct: 327 LGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYG 386
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PN TF+AV SAC + I++ F SMK +G+ PG EH + +V + G+ G L +A
Sbjct: 387 PRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDA 446
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
QFI++ +P EP W ++ R+H + DL E ++ ++P
Sbjct: 447 YQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYAL 506
Query: 479 -SKADPKK-----IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
+ D + + KK+ S ++ + F + T+YR ++L +
Sbjct: 507 AGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDEL--M 564
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ ES YVP ++HD+++E ++ AL YHSE+LA+A+GL+ T +RI+KNLR+C
Sbjct: 565 CRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICE 624
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+AIK +S I RE+IVRD RFHHFKDG CSC DYW
Sbjct: 625 DCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + K++H + + D+ + +I +Y K M A++VFD M
Sbjct: 192 FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP 251
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-EAF 398
R++ +W+ +I+GY NGL E + LF M + G QP+ T +++ S+C A++ +
Sbjct: 252 QRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCW 311
Query: 399 IH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
+H + + + GT L+ + +CG++ +A++ + E W A+ +
Sbjct: 312 LHDYADGNGFDLNVVLGTS----LINMYTRCGNVSKAREVFDSMK--ERNVVTWTAMISG 365
Query: 457 ARIHG 461
+HG
Sbjct: 366 YGMHG 370
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 195/342 (57%), Gaps = 28/342 (8%)
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ D +LN +++MY KCG + A R+F R + W+ +I G+A +G G+E L +F
Sbjct: 304 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 363
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M + G++PN+ TF+ + AC A + E FE M FG+ P EHY +V +LG+
Sbjct: 364 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 423
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------- 478
G L EA + I + +P +P W AL R+H + L + A +++++P
Sbjct: 424 GLLDEAHEMI-KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 482
Query: 479 ------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL 521
+ K + T KK S+++ + EF +P + R +E L
Sbjct: 483 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 542
Query: 522 KALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
+ ++ E+ YVPDT VL +ID+E KE AL YHSE+LA+A+GLIST TP+RI+KNL
Sbjct: 543 AEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNL 602
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
RVC DCH A K++S+I GR +IVRD RFHHF++G CSCGDY
Sbjct: 603 RVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 211/394 (53%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ E+ G+K D ++ C N E + H L S + + ++N
Sbjct: 359 CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGKCGS+ DA R+FD M+ SW ++ GYA G E + LFE+M GL+P
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKP 478
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+ V SAC A +E+ +F+SM+ + GI P +HY ++ + + G EA++F
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKAD 482
I+Q +P P A W L + R+ G++++ A E +++ DP +K
Sbjct: 539 IKQ-MPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQ 597
Query: 483 PKKIP-------TPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
++ KK S + K+++ F +P R EKL+ LN +M E
Sbjct: 598 WTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAE 657
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y PD VLHD+ K + +HSE+LAIA+GLI P P+RI+KNLRVC DCHNA
Sbjct: 658 EGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNA 717
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I GR+++VRD RFH F DG CSCGD+W
Sbjct: 718 TKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G EA+++ + GV D F ++ CG E K++H Y ++ +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDN 312
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +++MY KC S+ A VF M R++ SW MI GY N +E ++ F +M+
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++P++ T +V S+C + ++EE F + G+ LV + GKCG +
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+A + ++ + F + + YA+ + D E+++ +
Sbjct: 432 DAHRLFDE-MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLAN 474
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ N +I +C + DA+ +F M DR +W M+ G NGL E L +F +MR
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 372 LGLQPNEQTFLAVFSACGSADAIEE 396
G+ ++ TF ++ +ACG+ A+EE
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEE 296
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 217/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA++L G++ D + F ++ + + +++H Y ++S + +
Sbjct: 415 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 474
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + +A R FD M +R+ SW+ +I+ YA G +++FE M G
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 534
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TFL+V +AC +E +F MK ++ ISP EHY ++ LG+ G +
Sbjct: 535 FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 594
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
Q+ + + +PF+ W ++ + RIHG+ +L A + + ++P+ A P
Sbjct: 595 QKMLVE-MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYAR 653
Query: 484 ----------KKIPTP-PPKKRTAISILDGKSRLVEFRNPTLYR------DDEKLKALNQ 526
KKI +K + S ++ K ++ F + L DE + +
Sbjct: 654 AGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKE 713
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M + Y PD LH +D E K ++L YHSERLAIA+ L++TPA TP+RI+KNL C DC
Sbjct: 714 MDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDC 773
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H IK++S+IV R++IVRD++RFHHFKDG CSCGDYW
Sbjct: 774 HAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ T+ + G+ K++H + + + +L N +I+MY KCG + A+ F + +
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
++S SW +I GY NG +E LQLF MR+ GL+P+ TF ++ A S I
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+H ++S + S + LV + KCG L EA + ++
Sbjct: 460 LHSYLIRSGYKSSVFSGSV--LVDMYAKCGCLDEALRTFDE 498
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 22/255 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG +A++L G+ A F ++ + +VH L+ST ++
Sbjct: 213 KEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVF 272
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+NN +++ Y KC + D RR+FD M +R S++++I YA N L+LF +M+KLG
Sbjct: 273 VNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLG 332
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLF 431
+ + S GS + + I + + +E LG L+ + KCG L
Sbjct: 333 FDRQVLPYATMLSVAGS---LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
A+ + E +A W AL I G + H E L + D +A + P
Sbjct: 390 AAKSNFSNR--SEKSAISWTAL-----ITGYVQNGQHEEALQLFSDMRRAGLR------P 436
Query: 492 KKRTAISILDGKSRL 506
+ T SI+ S L
Sbjct: 437 DRATFSSIIKASSSL 451
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 260 GKVKEAIEL----MDKGVKADASCFYTLFEL--CGNPKWYENAKKVHDYFLQSTIRGDLV 313
G+ +A+ L + +GV D T+ L C P +H + ++ + +
Sbjct: 119 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVF 171
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++ Y K G + ARRVF M D+ +++ M+ G + GL + LQLF MR+ G
Sbjct: 172 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 231
Query: 374 LQPNEQTFLAVFS-ACGSADAIEEAFIHFESMKS 406
+ TF ++ + A G A + +H ++S
Sbjct: 232 IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRS 265
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 221/404 (54%), Gaps = 34/404 (8%)
Query: 250 VADLARLCQ-EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A AR E + + E+ G A + ++F E + VH + ++S
Sbjct: 131 IAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQ 190
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + N ++ MY K GSM DAR+VFD M R + +W+ M+ A GLG E + FE+
Sbjct: 191 KLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEE 250
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+RK G+Q N+ TFL+V +AC ++E +F+ MK ++ + P +HY+ V +LG+ G
Sbjct: 251 IRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAG 309
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
L EA F+ K+P EPTA W AL R+H + + +A + + +LDP P
Sbjct: 310 LLKEALIFV-FKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLY 368
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDE 519
K + KK A S + ++ + F ++ +YR E
Sbjct: 369 NIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWE 428
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ ++K++ YVP+T +VL I+++ +E L YHSE++A+A+ LI+ PA +RI+KN
Sbjct: 429 EINM--RIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKN 486
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+R+CGDCH+A K +S++ RE++VRD RFHHF +G CSCGDYW
Sbjct: 487 IRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG+++DAR VFD M R + SW +I GYA N + E + L M + +PN T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 381 FLAVFSACGS 390
F ++ A G+
Sbjct: 61 FTSLLKATGA 70
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 264 EAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EAI L+ ++A + F +L + G +++H ++ D+ + + ++
Sbjct: 41 EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALL 100
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +C M A VFD + ++ SW+ +I G+A G+ L F +M++ G
Sbjct: 101 DMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHF 160
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T+ ++FSA A+E+ ++H +KS ++ ++G ++G+ K G + +A++
Sbjct: 161 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTA----FVGNTMLGMYAKSGSMVDARKV 216
Query: 437 IEQ 439
++
Sbjct: 217 FDR 219
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 220/393 (55%), Gaps = 36/393 (9%)
Query: 260 GKVKEAIELMDKGVKADAS-CFYT---LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++A++L ++ D C YT CG ++ +++H + +Q
Sbjct: 413 GLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAG 472
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY KCG++ DAR VF M + SW+ MI+ +G G E L+LF+QM G+
Sbjct: 473 NALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGID 532
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ +FL + +AC A ++E F +FESMK +FGISPG +HY L+ +LG+ G + EA+
Sbjct: 533 PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARD 592
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------- 478
I + +PFEPT WEA+ + R +GD++ +A + + + P
Sbjct: 593 LI-KTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAG 651
Query: 479 ---SKADPKKIPTP-PPKKRTAISILDGKSRLVEF-----RNP---TLYRDDEKLKALNQ 526
A +K+ KK S ++ S++ F ++P +Y+ E + A +
Sbjct: 652 RWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGA--R 709
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M++ YVPDT++VLHD++ KE L HSE+LA+ +GL+ P + ++KNLR+CGDC
Sbjct: 710 MRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDC 769
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
H A+ MS+ VGRE++VRD +RFHHFKDG+CSC
Sbjct: 770 HTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 258 QEGKVKEAIELMDKGVK----ADASCFYTLFELCGNPKWYENAKKVHDYFLQS----TIR 309
Q G +A EL + V D F ++ C N ++ + K VH ++
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L +NN ++ +Y K G + A+R+FD M + + SW+ +++GY D+G D+ +++F+ M
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
N+ +++ + S E+A F M++E + P Y G + G+ G
Sbjct: 395 P----YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGA 449
Query: 430 LFEAQQF 436
L +Q
Sbjct: 450 LKHGRQL 456
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
V + ++ L+ C P+ +A+KV D + + DL V+ Y + G + A
Sbjct: 196 AVLSVSNALIALYMKCDTPEASWDARKVLD---EMPDKDDLTWTTMVVG-YVRRGDVNAA 251
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ + + W+ MI+GY +G+ + +LF +M + +E TF +V SAC +A
Sbjct: 252 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 311
Query: 392 DAIEEAFIHFESMKSEF 408
F+H +S+ +
Sbjct: 312 G----FFVHGKSVHGQI 324
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 218/405 (53%), Gaps = 34/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L + G+ +EA+ L D+ GV ++ C E VH Y
Sbjct: 226 AMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSR 285
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+R + L +++MY KCG +T + VF+ M +R++ +W ++G A NG+G+E L+LF
Sbjct: 286 GMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELF 345
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M G++PN TF+AV C A +EE F+SMK + + P EHY +V + G+
Sbjct: 346 KRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGR 405
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L +A FI +P EP W AL N +RIH ++DL HA + +++ SK D +
Sbjct: 406 AGRLDDAVDFI-NSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIE-SKNDAAHV 463
Query: 487 ----------------------PTPPPKKRTAISILDGKSRLVEF----RNPTLYRDDEK 520
+ KK S ++ ++ EF ++ Y+D +
Sbjct: 464 LLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQT 523
Query: 521 LKA--LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+ A ++++ Y +T+ VL DI++E KE A+ HSE+LA+A+GLI+ P T +RI+K
Sbjct: 524 MLAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVK 583
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH+ K++S++ RE+++RD RFHHFK G CSC DYW
Sbjct: 584 NLRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ G + AR +FD M R +W+ M+ GY G E L LF++M+
Sbjct: 189 DVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQ 248
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKC 427
K G+ +E T ++V +AC A+E ++H S ++ GT LV + KC
Sbjct: 249 KAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGT----ALVDMYSKC 304
Query: 428 GHLFEAQQFIE 438
G + + + E
Sbjct: 305 GVVTMSMEVFE 315
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 210/384 (54%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+K D +L C + E K +H Y + I D+ L +++MY KCG
Sbjct: 278 EMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCG 337
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ A +VF M ++ + +W +I G A G + LQ F++M G++P+ TF+ V +
Sbjct: 338 SIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLA 397
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A ++E HF SM +GI P EHY GLV +LG+ G + EA++ I + +P P
Sbjct: 398 ACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELI-KSMPMAPD 456
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK--------KRT--- 495
L RIHG+++ + A + ++++DP + + + K KRT
Sbjct: 457 QFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTREL 516
Query: 496 ----------AISILDGKSRLVEF-RNPTLYRDDEKL-----KALNQMKESTYVPDTRYV 539
S ++ + EF + + +R ++ ++++K + YVPD V
Sbjct: 517 MAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEV 576
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L D+ +E KE L HSE+LAIA+GL+ST TP+R++KNLR+C DCH+A K++S++ R
Sbjct: 577 LFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNR 636
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E+IVRD RFHHFKDG CSC +W
Sbjct: 637 EIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 264 EAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EA+ L D+ VK + + C + K++H+Y + +VLN +
Sbjct: 169 EAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVL 228
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+++Y KCG + AR +FD ++++ SW++MING+ ++ +E L LF +M+ G++ ++
Sbjct: 229 MDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDK 288
Query: 379 QTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
T ++ AC A+E ++H + + + ++ GT LV + KCG + A Q
Sbjct: 289 VTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGT----ALVDMYAKCGSIETAIQ 344
Query: 436 FIEQKLPFEPTAEFWEAL 453
+ ++P E W AL
Sbjct: 345 -VFHEMP-EKDVMTWTAL 360
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+M +G+ D F +LF+ C N K++H + + D N ++ MY CG
Sbjct: 78 EMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCG 134
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVF 385
+ AR+VFD M D+++ SW MI +A +E ++LF++M K ++PNE T + V
Sbjct: 135 CLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVL 194
Query: 386 SACGSA 391
+AC A
Sbjct: 195 TACARA 200
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 205/391 (52%), Gaps = 32/391 (8%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+A+E+ D+ GV+ + + C ++++ + QS I D L V+
Sbjct: 213 DALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVV 272
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG + +A RVFD + R + +W+ MI G+A +G D+ L+LF QM G+ P++
Sbjct: 273 DMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDV 332
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
T L V +AC A + E + + S GI P EHY +V + G+ G L EA++ I++
Sbjct: 333 TLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDE 392
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------- 483
+P +P AL +IHGD+DL + ++DLDP +
Sbjct: 393 -MPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDE 451
Query: 484 -----KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK------LKALNQMKESTY 532
+ + K S+++ EFR L + + +++++ Y
Sbjct: 452 VGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGY 511
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
VPDT LHD+ +E KE ALL HSE+LAIA+GL+ R LRI KNLRVC DCH A K
Sbjct: 512 VPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKY 571
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+SR+ GRE++VRD RFHHFKDG CSC DYW
Sbjct: 572 VSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ + G + DAR VFD M R++ SW+ MI+GY + L++F++MR
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMR 222
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
LG++ N + AC A A+ + ++ GI + +V + KCG +
Sbjct: 223 ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQS-GIEVDAKLATAVVDMYCKCGCV 281
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
EA + + LP W + +HG D A EL ++ + P +
Sbjct: 282 DEAWRVFDS-LPARGLTT-WNCMIGGFAVHGRC---DDALELFHQMEAAGVAPDDV 332
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 232/404 (57%), Gaps = 33/404 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A ++G+ +EA+ L + G + + L C + E K +H + ++S
Sbjct: 246 ALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS 305
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + N ++ MY K GS+ DA +VFD + + S + M+ GYA +GLG E Q F
Sbjct: 306 SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M + G++PN+ TFL+V +AC A ++E +F M+ ++ I P HY +V +LG+
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLLGR 424
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------- 479
G L +A+ FIE+ +P EPT W AL +++H + ++ +A + + +LDPS
Sbjct: 425 AGLLDQAKSFIEE-MPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTL 483
Query: 480 -------------KADPKKI-PTPPPKKRTAISILDGKSRL-VEFRNPTLYRDDEKL--- 521
A +KI KK A S ++ ++ + V N + EK+
Sbjct: 484 LANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKM 543
Query: 522 -KALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
+ LNQ +KE YVPDT +VL +DQ+ KE L YHSE+LA+++ L++TP + +RI+KN
Sbjct: 544 WEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKN 603
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+RVCGDCH+AIK +S +V RE+IVRD RFHHF DG CSCGDYW
Sbjct: 604 IRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 265 AIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
++L+D G ++ D + + TL + C + K VH + L S + DLV+ N ++ MY
Sbjct: 61 VLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYA 120
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
+CGS+ ARR+FD M R M SW MI GYA N + L LF +M G +PNE T +
Sbjct: 121 RCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSS 180
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ CG + IH K +G LV + +CG+L EA + KL
Sbjct: 181 LVKCCGYMASYNCGRQIHACCWK--YGCHSNVFVGSSLVDMYARCGYLGEA-MLVFDKLG 237
Query: 443 FEPTAEFWEALRNYAR 458
+ + + YAR
Sbjct: 238 CKNEVSWNALIAGYAR 253
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 96/183 (52%), Gaps = 7/183 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + + +L + CG Y +++H + ++ + + +++MY +CG
Sbjct: 166 MLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGY 225
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +A VFD + ++ SW+ +I GYA G G+E L LF +M++ G +P E T+ A+ S+
Sbjct: 226 LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS 285
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFE 444
C S +E+ ++H MKS S Y+G L+ + K G + +A++ ++ + +
Sbjct: 286 CSSMGCLEQGKWLHAHLMKS----SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVD 341
Query: 445 PTA 447
+
Sbjct: 342 VVS 344
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 206/378 (54%), Gaps = 28/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ +AS ++ C N K++H + ++ + +L + ++ MY KCG ++ A
Sbjct: 286 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 345
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
++F M R + +W+ MI+GYA +G G E + LFE+M+ G++PN TF+AV +AC
Sbjct: 346 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 405
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ FE M+ +GI P +HY +V +L + G L A I + +PFEP +
Sbjct: 406 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI-RSMPFEPHPSAYGT 464
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L R++ +++ + A +++ DP A + +
Sbjct: 465 LLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAV 524
Query: 492 KKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQ 545
K S ++ K + EFR+ P LY EKL L + MK YVPD +VLHD+D+
Sbjct: 525 VKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDE 584
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
K Q L+ HSE+LAI++GLIST LRI KNLRVCGDCHNA K++S+I RE+I+RD
Sbjct: 585 TLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRD 644
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHF+ G CSCGDYW
Sbjct: 645 TTRFHHFRGGHCSCGDYW 662
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
A S F ++ +W+ NA + +GD VL ++ Y G++ A
Sbjct: 196 AMVSGFACSRDMSAAEEWFRNAPE----------KGDAVLWTAMVSGYMDIGNVVKAIEY 245
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADA 393
F+ M R++ SW+ ++ GY N D+ L+LF M R+ +QPN T +V C + A
Sbjct: 246 FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 305
Query: 394 IEEAF---IHFESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ F IH MK ++ GT LV + KCG L A + + + A
Sbjct: 306 L--GFGKQIHQWCMKLPLSRNLTVGTS----LVSMYCKCGDLSSACKLFGEMHTRDVVA- 358
Query: 449 FWEALRNYARIHGD 462
W A+ + HGD
Sbjct: 359 -WNAMISGYAQHGD 371
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 207/384 (53%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GV+ D C E + VH ++ + L + N ++ MY K G
Sbjct: 133 DMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTG 192
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ +AR+VFD R +W +I GYA NG G+E LQ++ +M G +P+ TF+ +
Sbjct: 193 SLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLF 252
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A ++ HF+SM+++ GI+PG +HY +V VLG+ G L EA + ++Q +
Sbjct: 253 ACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQS-TMKLD 311
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTP 489
A W+AL R H + +L + A E++ LDP+ A D +I T
Sbjct: 312 ATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTL 371
Query: 490 PPKKRTA------ISILDGKSRLVEFRNPTLYRDDEKLKALNQMKEST----YVPDTRYV 539
+ A + G + L + R DE + + +M E +V DT +
Sbjct: 372 MKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVADTDWA 431
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L D E +E+ L +HSERLA+A+GL++ PA P+R+ KNLRVCGDCH AIK+++++ GR
Sbjct: 432 LQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVAKVYGR 491
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E+I+RD+ FHH +DG CSCGDYW
Sbjct: 492 EIILRDSNCFHHMRDGVCSCGDYW 515
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L + N +++ Y K AR +FD M R + +W ++ G A +G D L+++ M
Sbjct: 77 LHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVA 136
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++P+E A S+C + +E +H +++ G+ P LV + K G L
Sbjct: 137 SGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVR--LGLEPFLSVGNSLVSMYAKTGSL 194
Query: 431 FEAQQFIEQKLPFEPTAEFWEAL 453
EA++ + P W AL
Sbjct: 195 REARKVFDATRLRCPVT--WTAL 215
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 216/401 (53%), Gaps = 40/401 (9%)
Query: 258 QEGKVKEAIELMDKGVKADA----SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G E+++L + + A A + CG E+ + +H Y I+ ++
Sbjct: 250 QSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVH 309
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+MY KCGS+ DAR VFD + D+ + +W+ MI GYA +G LQLFE+M + G
Sbjct: 310 VGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETG 369
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P + TF+ + SACG +EE F M+ ++GI P EHY +V +LG+ GHL EA
Sbjct: 370 HKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEA 429
Query: 434 QQFIE-QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---- 488
++ + +P W L R+H +I L + + +VD + + + +
Sbjct: 430 YGLVKNMTIAADPV--LWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYA 487
Query: 489 ------PPPKKRTAI-----------SILDGKSRLVEF-----RNPTLYRDDEKLKALNQ 526
K RT + S ++ +++ EF ++P + E LN+
Sbjct: 488 ATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHP---KSKEIYVMLNE 544
Query: 527 ----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+K Y P T VLHD+ +E KEQ+L HSE+LAIA+GLIST T ++I+KNLRV
Sbjct: 545 INSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRV 604
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH +K++S I GR++++RD RFHHF+DG CSCGDYW
Sbjct: 605 CSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 57/278 (20%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GV+ +A F ++ + C E+ K +H ++ + DL + ++++Y + G
Sbjct: 135 QMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGG 190
Query: 327 SMTDARRVFDHMADRSMDS-------------------------------WHLMINGYAD 355
+ AR++FD M +RS+ S W++MI GYA
Sbjct: 191 DVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQ 250
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISP 412
+G+ +E L+LF +M PNE T LAV SACG A+E +IH E+ + +
Sbjct: 251 SGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHV 310
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
GT L+ + KCG L +A+ ++ + A W ++ +HG HA +L
Sbjct: 311 GT----ALIDMYSKCGSLEDARLVFDRIRDKDVVA--WNSMIVGYAMHG---FSQHALQL 361
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISILD--GKSRLVE 508
++ + P I T I IL G LVE
Sbjct: 362 FEEMTETGHKPTDI--------TFIGILSACGHGGLVE 391
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H L+ + + +LN K+ Y G + + VF+ + ++ S+ +I+ + +
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH 416
L D + QM G++PN TF +V +C ++E +H +++K + G++
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIK----LGLGSDL 176
Query: 417 YL--GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
Y+ GLV V + G + A+Q + K+P L Y+++ G++D
Sbjct: 177 YVRTGLVDVYARGGDVVCARQLFD-KMPERSLVSLTTMLTCYSKM-GELD 224
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 209/385 (54%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ +G++ + + F ++ +C + +++H L+ + D+ + +I MY KCG
Sbjct: 323 EMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A+RVF+ + + W+ MI GYA +GLG+E L +F+ +R + P+ T++ V +
Sbjct: 383 NLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLT 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E F SM I G HY +V +LG+ G + EA I +P EP
Sbjct: 443 ACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLI-NNMPVEPD 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + ++ + A + +++L+P A P K
Sbjct: 502 AIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKF 561
Query: 486 IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMK-------ESTYVPDTRY 538
I + K S ++ + F + + E LN ++ ES Y D +
Sbjct: 562 ISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSF 621
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+D+E K Q+L YHSER A+AYGL+ PA P+R++KNLRVCGDCH+AIK++++I
Sbjct: 622 VLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITS 681
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD RFHHFKDG CSC DYW
Sbjct: 682 REIILRDANRFHHFKDGLCSCRDYW 706
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ +G+ G + A+ +F+ M R +W MI Y N E L F +M G++
Sbjct: 271 NAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIR 330
Query: 376 PNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
PN +F+++ + C +AD E +H ++ F L+ + KCG+L +
Sbjct: 331 PNYTSFISILTVCAALATADYGRE--LHAAMLRCSFDTDVFAVS--ALITMYIKCGNLDK 386
Query: 433 AQQFIEQKLPFEPT-AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
A++ FEP W ++ HG L + A + DL ++ P I
Sbjct: 387 AKRVFNM---FEPKDVVMWNSMITGYAQHG---LGEEALGIFDDLRLARMAPDGI 435
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 246 LPPSVADLARL----CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHD 301
LPPSV L + G + +AI L + + + + L + A+K+ D
Sbjct: 108 LPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFD 167
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
D+V ++ Y + G +T+AR +FD M R++ SW MI+GYA NG
Sbjct: 168 EMPDK----DVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVIL 223
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+LFE M NE ++ A+ A +E+A F +M
Sbjct: 224 ARKLFEVMP----DRNEVSWTAMLVGYIQAGHVEDAEDLFNAM 262
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 220/399 (55%), Gaps = 35/399 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +E+I L M+ G + D++ +L C + +HDY + ++V
Sbjct: 203 QNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVV 262
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I MY +CG+++ AR VFD M +R++ +W MI+GY +G G + ++LF +MR G
Sbjct: 263 LGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYG 322
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PN TF+AV SAC + I++ F SMK +G+ PG EH + +V + G+ G L +A
Sbjct: 323 PRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDA 382
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
QFI++ +P EP W ++ R+H + DL E ++ ++P
Sbjct: 383 YQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYAL 442
Query: 479 -SKADPKK-----IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
+ D + + KK+ S ++ + F + T+YR ++L +
Sbjct: 443 AGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDEL--M 500
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ ES YVP ++HD+++E ++ AL YHSE+LA+A+GL+ T +RI+KNLR+C
Sbjct: 501 CRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICE 560
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+AIK +S I RE+IVRD RFHHFKDG CSC DYW
Sbjct: 561 DCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + K++H + + D+ + +I +Y K M A++VFD M
Sbjct: 128 FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP 187
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-EAF 398
R++ +W+ +I+GY NGL E + LF M + G QP+ T +++ S+C A++ +
Sbjct: 188 QRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCW 247
Query: 399 IH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
+H + + + GT L+ + +CG++ +A++ + E W A+ +
Sbjct: 248 LHDYADGNGFDLNVVLGTS----LINMYTRCGNVSKAREVFDSMK--ERNVVTWTAMISG 301
Query: 457 ARIHG 461
+HG
Sbjct: 302 YGMHG 306
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 217/402 (53%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ EA++L +G++ ++ + N + + H + L+
Sbjct: 264 VACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGF 323
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +++MY KCG + DAR +F+ M R++ SW+ MI GYA +G + ++LF
Sbjct: 324 HHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRS 383
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+ +P+ TF V AC A EE +F M+ + GISP EHY +V +LG+ G
Sbjct: 384 MQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAG 443
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------ 482
L +A I Q +PFEP W +L R+HG++ L + A E + L+P A
Sbjct: 444 KLDDAYDIINQ-MPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLS 502
Query: 483 ----PKKI-----------PTPPPKKRTAISILDGKSRL-----VEFRNPTLYRDDEKLK 522
KK+ T KK S ++ K+++ + +P + EKLK
Sbjct: 503 NIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLK 562
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L +M+ + P T YVLHD++++ K+ L HSE+LA+A GLIST TPL++IKNLR
Sbjct: 563 HLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLR 622
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH A+K +S RE+ VRD RFHHFKDGKCSC DYW
Sbjct: 623 ICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 43/267 (16%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ ++A+ + +G DA+ G+ +++H Y +++ R D
Sbjct: 133 RSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDAC 192
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+MYGKCG + RVFD + + S + ++ G + N E L+LF + G
Sbjct: 193 VATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRG 252
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE-------------------------- 407
++ N ++ ++ + C EA F M+SE
Sbjct: 253 IELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGR 312
Query: 408 ----FGISPGTEH--YLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
F + G H Y+G LV + KCG + +A+ E +P+ W A+ +
Sbjct: 313 SAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEA-MPYRNVVS-WNAMIGGYAM 370
Query: 460 HGDIDLEDHAEELMVDLDPSKADPKKI 486
HG+ ++A L + SK P +
Sbjct: 371 HGE---AENAVRLFRSMQSSKEKPDLV 394
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D + + ++ Y + G+ DAR V D M R++ W +I +A +G + L E+MR
Sbjct: 54 DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP---GTEHYLGLVGVLG 425
G++PN T+ + S + +A + M E G P G L VG +G
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGE-GFLPDATGVSCALSAVGDVG 170
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 215/386 (55%), Gaps = 33/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G +A + ++F E K VH + ++S R + N +++MY K G
Sbjct: 256 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 315
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DAR+VFD + + + +W+ M+ +A GLG E + FE+MRK G+ N+ TFL++ +
Sbjct: 316 SMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E +F+ MK E+ + P +HY+ +V +LG+ G L +A FI K+P +PT
Sbjct: 376 ACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFI-FKMPMKPT 433
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + + A + + +LDP P K
Sbjct: 434 AAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKM 493
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK A S ++ ++ + F R+ +Y+ E++ Q++++ YVP+T
Sbjct: 494 MKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISI--QIRKAGYVPNTD 551
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YVL +D++ ++ L YHSE++A+A+ LI+ P +RI+KN+R+CGDCH+A + +S++
Sbjct: 552 YVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVF 611
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD RFHHF G CSCGDYW
Sbjct: 612 KREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 246 LPPSVADLA--RLCQEGKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDY 302
L SVAD+ G +++ ++ +D + + A +++L C + ++A+ +H +
Sbjct: 30 LTASVADIPVPAAASTGIIRDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAH 89
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
S G + L+N +I +Y KCG++ DARRVFD M R M SW +I GYA N + DE
Sbjct: 90 LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEA 149
Query: 363 LQLFEQMRKLGLQPNEQTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYLG- 419
L L M + +PN TF ++ A G ++ I E IH ++K ++ + Y+G
Sbjct: 150 LGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ-IHALTVKYDW----HDDVYVGS 204
Query: 420 -LVGVLGKCGHLFEAQQFIEQ 439
L+ + +CG + A +Q
Sbjct: 205 ALLDMYARCGRMDMAIAVFDQ 225
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L + G +++H ++ D+ + + +++MY +CG M A VFD +
Sbjct: 168 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE 227
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
++ SW+ +I G+A G G+ L +F +M++ G + T+ +VFSA A+E+ +
Sbjct: 228 SKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKW 287
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
+H +KS +S ++G ++ + K G + +A++ ++
Sbjct: 288 VHAHMIKSGERLSA----FVGNTILDMYAKSGSMIDARKVFDR 326
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 217/402 (53%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK EA+EL + GVK ++ L CGN + K H + L++ I
Sbjct: 316 IASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGI 375
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +I+MY KCG M +R FD M +R++ SW+ ++ GYA +G E + +FE
Sbjct: 376 FNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFEL 435
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ G +P+ +F V SAC EE + +F+SM G+ EHY +V +LG+ G
Sbjct: 436 MQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSG 495
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA I+Q +PFEP + W AL + R+H +DL + A + + +L+P
Sbjct: 496 RLEEAYAMIKQ-MPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLS 554
Query: 479 ----SKADPKKIPTPPPKKRTAISILDGKSRLVEFRN------------PTLYRDDEKLK 522
SKA ++ R+ + +E +N P + + EKL
Sbjct: 555 NIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLA 614
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L +MK+S YVP T +VL D++++ KEQ L HSE+LA+ GL++T PL++IKNLR
Sbjct: 615 KLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLR 674
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+C DCH IK +S RE+ VRD RFH FK G CSCGDYW
Sbjct: 675 ICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+K D + ++ G+ ++H Y ++ + D + + +I+MYGKC ++
Sbjct: 204 EGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASE 263
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
VF+ M + + + + ++ G + NGL D L++F+Q + G+ N ++ ++ ++C
Sbjct: 264 MSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFK--GMDLNVVSWTSMIASCSQ 321
Query: 391 ADAIEEAFIHFESMKSEFGISP 412
EA F M+ E G+ P
Sbjct: 322 NGKDMEALELFREMQIE-GVKP 342
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 246 LPPSVADLARLCQEGKVKEAIE-LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
LP ++ ++L G V ++ +G+ D+ T+ + C + K++H + L
Sbjct: 42 LPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFAL 101
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
S + D V+ + ++ MY + + DAR VFD + + + +I+ +A G E +
Sbjct: 102 VSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKE 161
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
LF Q R LG++ N ++ + S + + +A + F++M E G+ P
Sbjct: 162 LFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLE-GLKP 208
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 207/387 (53%), Gaps = 33/387 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL + G+K C + + +H+Y ++ + +N +I+MY KCG
Sbjct: 226 ELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCG 285
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M R +W MI YA +G G + + + +M+K +QP+E TFL +
Sbjct: 286 SLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILY 345
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE + +F SM E+GI P +HY ++ +LG+ G L EA +FI++ LP +PT
Sbjct: 346 ACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDE-LPIKPT 404
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
W L + HG++++ + + +LD S K
Sbjct: 405 PILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKM 464
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ K S ++ + + EF + L+ ++L + ++K + YVPDT
Sbjct: 465 MVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDEL--VKELKLAGYVPDTS 522
Query: 538 YVLH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
V + DI+ E KE L YHSE+LAI YGL++TP T +R++KNLRVC DCHNA K +S I
Sbjct: 523 LVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLI 582
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR++I+RD +RFHHFKDGKCSCGDYW
Sbjct: 583 FGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ G+ D F +L + C K E K++H ++ + ++ + +I MY C
Sbjct: 125 QVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACN 184
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ ARRVFD + + + +++ +I A N +E L LF ++++ GL+P + T L S
Sbjct: 185 DVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALS 244
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKL 441
+C A++ +IH E+ G + Y+ L+ + KCG L +A + + +
Sbjct: 245 SCALLGALDLGRWIH------EYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVS-VFKDM 297
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
P T + W A+ HG A ++ ++ +K P +I
Sbjct: 298 PRRDT-QAWSAMIVAYATHGH---GSQAISMLREMKKAKVQPDEI 338
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 206/396 (52%), Gaps = 34/396 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G E++ L DK GV D T+ C A+ + DY + + D++L
Sbjct: 312 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 371
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+M+ KCG + AR +FD M ++++ SW MI Y +G G + L LF M + G+
Sbjct: 372 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 431
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ T +++ AC A +EE F M ++ + +HY +V +LG+ G L EA +
Sbjct: 432 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 491
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
IE + E W A R H D+ L + A +++L P
Sbjct: 492 LIES-MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAG 550
Query: 481 --ADPKKIPTPPPKKR-------TAISILDGKSRLVEFRNPTLYRDDE---KLKAL-NQM 527
D K ++R T I + D KS + T R E LK+L N++
Sbjct: 551 RWEDVAKTRDLMSQRRLKKIPGWTWIEV-DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 609
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
+ YVPDT +VLHD+D+E K L HSE+LAIA+GLI+TP TP+RIIKNLRVCGDCH
Sbjct: 610 ELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCH 669
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I GR +IVRD RFHHFK+G CSCGDYW
Sbjct: 670 TFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK E++ L +K GV D T+ C A+ + DY + + D++L
Sbjct: 110 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 169
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + AR +FD M ++++ SW MI Y +G G + L LF M G+
Sbjct: 170 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 229
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFE 432
P++ T ++ AC ++ IH + +FG+ +H++ LV + GKC + E
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIH--HIVYKFGLD--LDHFVCAALVDMYGKCREI-E 284
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYA 457
+F+ K+P + + YA
Sbjct: 285 DARFLFDKMPERDLVTWTVMIGGYA 309
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 260 GKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ ++A++L + G+ D +L C + K + + +H + + D +
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MYGKC + DAR +FD M +R + +W +MI GYA+ G +E L LF++MR+ G+
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330
Query: 376 PNEQTFLAVFSACGSADAIEEAFI---HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
P++ + V AC A+ +A + + K + + GT ++ + KCG +
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGT----AMIDMHAKCGCVES 386
Query: 433 AQQFIEQ 439
A++ ++
Sbjct: 387 AREIFDR 393
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ G + D + C + K + + +H + + D + +++MY KC
Sbjct: 20 ELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCR 79
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DAR +FD M +R + +W +MI GYA+ G +E L LFE+MR+ G+ P++ + V
Sbjct: 80 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVF 139
Query: 387 ACGSADAIEEAFI---HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC A+ +A I + + K + + GT ++ + KCG + A++ ++
Sbjct: 140 ACAKLGAMHKARIIDDYIQRKKFQLDVILGT----AMIDMYAKCGCVESAREIFDR 191
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 211/391 (53%), Gaps = 33/391 (8%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+EL + GV+ ++ +C + ++VH + ++ GD+ + + ++
Sbjct: 314 EALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLM 373
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MY KCG + A+ VFD + + W+ +I+GYA +GLG+E L++F +M G PN+
Sbjct: 374 TMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKV 433
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
T +A+ +AC +EE FESM+S+F ++P EHY V +LG+ G + +A + I
Sbjct: 434 TLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELI-N 492
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------- 483
+ +P A W AL + H +DL + A + + +++P A P
Sbjct: 493 SMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGD 552
Query: 484 -----KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQ-------MKEST 531
K + T K S ++ ++ F + E+ L ++E+
Sbjct: 553 VAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAG 612
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y PD +VLHD+D+E K +L HSERLA+AYGL+ P P+R++KNLRVCGDCH AIK
Sbjct: 613 YSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIK 672
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
++S++ RE+I+RD RFHHF +G+CSC DY
Sbjct: 673 LISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 45/296 (15%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENA 296
+ P D V S + LC+EG+V EA E+ D+ + + + T+ G K + A
Sbjct: 165 DMMPGKDVV--ASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVA 222
Query: 297 KKVHDY------------FLQSTIRGDL---------------VLNNKVIEMYGKCGSMT 329
+K+ + L T+ G + + N +I G+ G +
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIV 282
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
ARRVFD M DR +W MI Y G E L+LF QM++ G++P+ + +++ S C
Sbjct: 283 KARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCA 342
Query: 390 SADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ +++ +H ++ +F L + V KCG L +A + + + P +
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYV--KCGELVKA-KLVFDRFPSKDIIM 399
Query: 449 FWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
+ + YA HG L + A ++ ++ S P K+ T I+IL S
Sbjct: 400 WNSIISGYAS-HG---LGEEALKVFHEMPLSGTMPNKV--------TLIAILTACS 443
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
QEG V EA L + + + + +F + ++A+K++D D+V +
Sbjct: 122 QEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGK----DVVASTN 177
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I + G + +AR +FD M +R++ +W MI GY N D +LFE M +
Sbjct: 178 MIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMP----EKT 233
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
E ++ ++ + IE+A FE M + I+ ++ LG+ G + +A++
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN-----AMIVALGEVGEIVKARRVF 288
Query: 438 EQ 439
+Q
Sbjct: 289 DQ 290
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
I + G + +AR+ FD + +++ SW+ +++GY NGL E Q+F++M
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEM 74
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V N ++ Y K + +AR VF+ M +R++ SW M+ GY G+ E LF +M
Sbjct: 78 NIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP 137
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
+ NE ++ +F I++A + + + PG + ++G L + G
Sbjct: 138 ----ERNEVSWTVMFGGLIDGGRIDDA-------RKLYDMMPGKDVVASTNMIGGLCREG 186
Query: 429 HLFEAQQFIEQ 439
+ EA++ ++
Sbjct: 187 RVDEAREIFDE 197
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
N ++ Y G +AR++FD M +R++ SW+ +++GY N + +E +FE M
Sbjct: 52 NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIM 105
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 211/394 (53%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ E+ G+ D ++ C N E + H L S + + ++N
Sbjct: 353 CSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSN 412
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGKCGS+ DA R+FD M+ SW +++GYA G E + LFE+M G++P
Sbjct: 413 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKP 472
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+ V SAC A +E+ +F SM+ + GI P +HY ++ + + G L EA++F
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEF 532
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKAD 482
I+Q +P P A W L + R+ GD+++ A E ++++DP +K
Sbjct: 533 IKQ-MPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQ 591
Query: 483 PKKIP-------TPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
++ KK S + K+++ F +P EKL+ LN +M E
Sbjct: 592 WNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLE 651
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y PD VLHD+ K + +HSE+LAIA+GLI P P+RI+KNLRVC DCHNA
Sbjct: 652 EGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNA 711
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I GR+++VRD RFH F DG CSCGD+W
Sbjct: 712 TKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 19/220 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+E+ + G+ D F ++ CG E K++H Y +++ ++
Sbjct: 249 QNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVF 308
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY KC S+ A VF M +++ SW +I GY NG +E +++F +M++ G
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGH 429
+ P++ T +V S+C + ++EE F + + G HY+ LV + GKCG
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEG-AQFHCL----ALVSGLMHYITVSNALVTLYGKCGS 423
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRN----YARIHGDIDL 465
+ +A + ++ + F W AL + + R IDL
Sbjct: 424 IEDAHRLFDE-MSFHDQVS-WTALVSGYAQFGRAKETIDL 461
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V+ N +I +C + +ARR+F+ M DR +W M+ G+ NGL E L++F +MR
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMR 264
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEE 396
G+ ++ TF ++ +ACG+ A+E+
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQ 290
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 206/378 (54%), Gaps = 28/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ +AS ++ C N K++H + ++ + +L + ++ MY KCG ++ A
Sbjct: 237 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 296
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
++F M R + +W+ MI+GYA +G G E + LFE+M+ G++PN TF+AV +AC
Sbjct: 297 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ FE M+ +GI P +HY +V +L + G L A I + +PFEP +
Sbjct: 357 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI-RSMPFEPHPSAYGT 415
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L R++ +++ + A +++ DP A + +
Sbjct: 416 LLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAV 475
Query: 492 KKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQ 545
K S ++ K + EFR+ P LY EKL L + MK YVPD +VLHD+D+
Sbjct: 476 VKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDE 535
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
K Q L+ HSE+LAI++GLIST LRI KNLRVCGDCHNA K++S+I RE+I+RD
Sbjct: 536 TLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRD 595
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHF+ G CSCGDYW
Sbjct: 596 TTRFHHFRGGHCSCGDYW 613
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
++F + +GD VL ++ Y G++ A F+ M R++ SW+ ++ GY N D
Sbjct: 163 EWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHAD 222
Query: 361 EGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFG--ISPGT 414
+ L+LF M R+ +QPN T +V C + A+ F IH MK ++ GT
Sbjct: 223 DALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL--GFGKQIHQWCMKLPLSRNLTVGT 280
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
LV + KCG L A + + + A W A+ + HGD
Sbjct: 281 S----LVSMYCKCGDLSSACKLFGEMHTRDVVA--WNAMISGYAQHGD 322
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 216/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA++L G++ D + F ++ + + +++H Y ++S + +
Sbjct: 415 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 474
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + +A R FD M +R+ SW+ +I+ YA G +++FE M G
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 534
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TFL+V +AC +E +F MK ++ ISP EHY ++ LG+ G +
Sbjct: 535 FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 594
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----- 488
Q+ + + +PF+ W ++ + RIHG+ +L A + + ++P+ A P I +
Sbjct: 595 QKMLVE-MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYAR 653
Query: 489 ----------------PPPKKRTAISILDGKSRLVEFRNPTLYR------DDEKLKALNQ 526
+K + S ++ K ++ F + L DE + +
Sbjct: 654 AGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKE 713
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M + Y PD LH +D E K ++L YHSERLAIA+ L++TPA TP+RI+KNL C DC
Sbjct: 714 MDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDC 773
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H IK++S+IV R++IVRD++RFHHFKDG CSCGDYW
Sbjct: 774 HAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ T+ + G+ K++H + + + +L N +I+MY KCG + A+ F + +
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
++S SW +I GY NG +E LQLF MR+ GL+P+ TF ++ A S I
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+H ++S + S + LV + KCG L EA + ++
Sbjct: 460 LHSYLIRSGYKSSVFSGSV--LVDMYAKCGCLDEALRTFDE 498
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 22/255 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG +A++L G+ A F ++ + +VH L+ST ++
Sbjct: 213 KEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVF 272
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+NN +++ Y KC + D RR+FD M +R S++++I YA N L+LF +M+KLG
Sbjct: 273 VNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLG 332
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLF 431
+ + S GS + + I + + +E LG L+ + KCG L
Sbjct: 333 FDRQVLPYATMLSVAGS---LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
A+ + E +A W AL I G + H E L + D +A + P
Sbjct: 390 AAKSNFSNR--SEKSAISWTAL-----ITGYVQNGQHEEALQLFSDMRRAGLR------P 436
Query: 492 KKRTAISILDGKSRL 506
+ T SI+ S L
Sbjct: 437 DRATFSSIIKASSSL 451
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 260 GKVKEAIEL----MDKGVKADASCFYTLFEL--CGNPKWYENAKKVHDYFLQSTIRGDLV 313
G+ +A+ L + +GV D T+ L C P +H + ++ + +
Sbjct: 119 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVF 171
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++ Y K G + ARRVF M D+ +++ M+ G + GL + LQLF MR+ G
Sbjct: 172 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 231
Query: 374 LQPNEQTFLAVFS-ACGSADAIEEAFIHFESMKS 406
+ TF ++ + A G A + +H ++S
Sbjct: 232 IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRS 265
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 221/397 (55%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEAI L D+ GV+ +++ F ++ C + + VH+Y + + + ++V
Sbjct: 189 QNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVV 248
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I MY +CG+++ AR VFD M +R++ +W MI+GY NG G + ++LF +MR+ G
Sbjct: 249 LGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNG 308
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L PN TF+AV SAC A + E FESM+ E+ + P EH++ LV +LG+ G L EA
Sbjct: 309 LLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEA 368
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE---------------------L 472
FI++ + EP W A+ ++H + L E L
Sbjct: 369 YNFIKE-IHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYAL 427
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISI--LDGKSRLVEFRNPTLYRDDEKLKALNQM--- 527
+D + + KK+ S LD K+ L + + +E L+Q+
Sbjct: 428 AGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRK 487
Query: 528 -KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+E+ YV + V+H++++E +E AL YHSE+LAIA+GL+ T T +RI+KNLR+C DC
Sbjct: 488 CREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDC 547
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK +S I RE+IVRD RFHHFK+G CSC DYW
Sbjct: 548 HSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 99/179 (55%), Gaps = 13/179 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + + + +H + L + D+ + ++ YGKCG + +AR+VFD M
Sbjct: 114 FTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMR 173
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA-IEEAF 398
DRS+ +W+ MI+GY NG E ++LF++M+++G++PN TF++V SAC A I +
Sbjct: 174 DRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCW 233
Query: 399 IHFESMKSEFGISPGTEH--YLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+H E+ + G + LG L+ + +CG++ +A++ + A W A+
Sbjct: 234 VH------EYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVA--WTAM 284
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 228/402 (56%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK EA+EL + GVK + ++ CGN + + H + ++ +
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + + +I+MY KCG + ++ VF+ M +++ W+ ++NG++ +G E + +FE
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + L+P+ +F ++ SACG +E + +F+ M E+GI P EHY +V +LG+ G
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA I++ +PFEP + W AL N R+ ++DL + A E + L+P
Sbjct: 540 KLQEAYDLIKE-MPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLS 598
Query: 479 ---------SKADP--KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
++ D K+ + KK S + K+R+ +P + + EK+
Sbjct: 599 NIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMD 658
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
++ +M++S + P+ + LHD++++ +EQ L HSE+LA+ +GL++TP TPL++IKNLR
Sbjct: 659 EISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLR 718
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH IK +S GRE+ +RD RFHHFKDG CSCGD+W
Sbjct: 719 ICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ G+ D+ LF++C ++ K++H S + D + + MY +CG
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M DAR+VFD M+D+ + + ++ YA G +E +++ +M G++ N ++ + S
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 388 CGSADAIEEAFIHFESMKSEFGISP 412
+ +EA + F+ + G P
Sbjct: 227 FNRSGYHKEAVVMFQKIH-HLGFCP 250
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 56/250 (22%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G KEA+ + K G D ++ G+ + + +H Y ++ + D
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288
Query: 314 LNNKVIEMYGKCGSMTDARRVFDH--------------------MADRSMD--------- 344
+ + +I+MYGK G + +F+ + D++++
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 345 ------SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
SW +I G A NG E L+LF +M+ G++PN T ++ ACG+ A+
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG- 407
Query: 399 IHFESMKSEFGISPGTEHYL-------GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+S G + H L L+ + KCG + Q + +P + W
Sbjct: 408 ------RSTHGFAVRV-HLLDNVHVGSALIDMYAKCGRI-NLSQIVFNMMPTKNLV-CWN 458
Query: 452 ALRNYARIHG 461
+L N +HG
Sbjct: 459 SLMNGFSMHG 468
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 234/439 (53%), Gaps = 42/439 (9%)
Query: 214 NSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGV 273
NS+ + + ++ +V NNM P+ D V ++ ++ Q + EA+E+ +
Sbjct: 488 NSFMSALVQNNLFDEARDVFNNM---PSPDVVSWTTI--ISACAQADQGNEAVEIFRSML 542
Query: 274 KA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ L L GN + +++H ++ + LV+ N ++ MY KC S
Sbjct: 543 HERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-A 601
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
D+ +VFD M +R + +W+ +I GYA +GLG E +++++ M G+ PNE TF+ + AC
Sbjct: 602 DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACS 661
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ ++E F+SM S++G++P EHY +V +LG+ G + A+ FI +P EP +
Sbjct: 662 HSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFI-YDMPIEPDSVI 720
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPT 488
W AL +IH ++++ A E + ++PS A K +
Sbjct: 721 WSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKE 780
Query: 489 PPPKKRTAISILDGKSRLVEFRNP--------TLYRDDEKLKALNQMKESTYVPDTRYVL 540
K S + K+++ F +Y +L L +K + YVPDT +VL
Sbjct: 781 RGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTL--LKATGYVPDTDFVL 838
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
HDID+E KE +LLYHSE+LA+AYGL+ TP P++I+KNLR+CGDCH IK +S + RE
Sbjct: 839 HDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKRE 898
Query: 601 LIVRDNKRFHHFKDGKCSC 619
+ VRD RFHHF++G CSC
Sbjct: 899 IDVRDGNRFHHFRNGSCSC 917
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A + G+ ++A+ L KG+ S + F C N + E K+VH +++
Sbjct: 390 IAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGC 449
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + + N +I +YGK S+ R++FD M + S++ ++ N L DE +F
Sbjct: 450 QFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNN 509
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI--SPGTEHYLGLVGVLG 425
M P+ ++ + SAC AD EA F SM E + P LGL G LG
Sbjct: 510 MP----SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 293 YENAKKVHD---YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLM 349
Y A +V D F +R + V N ++ Y + G +T AR++FD M R + SW+ M
Sbjct: 105 YARAGRVRDARRVFDGMGVR-NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTM 163
Query: 350 INGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFG 409
+ GY + L +E LFE+M + N ++ + S + A+ F +M E G
Sbjct: 164 LTGYCHSQLMEEARNLFERMP----ERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCE-G 218
Query: 410 ISPGTEHYLGLVGVLGKCGHL-----FEAQQFIEQKLPFEPTAEFWEALRN-YARIHGDI 463
++P + LV VL HL E+ + K FE A+ N Y + D+
Sbjct: 219 MTPEQPN---LVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTK---DV 272
Query: 464 DLEDHA 469
++ D A
Sbjct: 273 NMLDSA 278
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKADASCFYTL-FELCGNPKWYENAKKVHDYFLQSTI 308
+ +L RL G++ EA E+ D D + ++ F C N + + + D +
Sbjct: 40 IRELGRL---GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGM-PDAGRSLADAISGGNL 95
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R +L + Y + G + DARRVFD M R+ +W+ M+ Y NG +LF+
Sbjct: 96 RTGTIL----LSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDA 151
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGIS 411
M + ++ + + + +EEA FE M G+S
Sbjct: 152 MP----SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVS 190
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V N +I Y + + +A +F+ M R+ SW MI GYA NG ++ L + +
Sbjct: 351 NVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALH 410
Query: 371 KLGLQPNEQTFLAVFSACGSADAIE 395
+ G+ P+ + + F AC + +A+E
Sbjct: 411 RKGMLPSLSSLTSSFFACSNIEALE 435
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 214/386 (55%), Gaps = 29/386 (7%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
+++ G K D+ ++ C + + K VH Y ++ + D V + VI+MY K
Sbjct: 295 VVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSK 353
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CGS++ AR VFD ++ R SW+ +I Y +G G+E L LF QMR+ ++P+ TF ++
Sbjct: 354 CGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASL 413
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SA + +E+ F M +E+ I P +HY +V +L + G + EAQ+ IE + E
Sbjct: 414 LSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMIT-E 472
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------------ADPK 484
P W AL + HG + + A + +++L+P A+ +
Sbjct: 473 PGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVR 532
Query: 485 KIPTPPPKKRT---AISILDGKSRLVEFRNPTLYRDDEKLKALN----QMKESTYVPDTR 537
KI K+ ++ ++GK + + ++ +E ++ L +MK YVP T
Sbjct: 533 KIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTE 592
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+VLH++++E KE+ L HSERLAIA+GL++T T L I KNLRVCGDCH A K +S+IV
Sbjct: 593 FVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIV 652
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD KRFHHFKDG CSCGDYW
Sbjct: 653 NREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 256 LCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G+ +EA+++ K V+ D L + C + +H Y ++ I D
Sbjct: 181 LAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMD 240
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+++ +++MY K G + A VF M +++ SW +I+G+A NG LQL M+
Sbjct: 241 VIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQS 300
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA---------FIHFESMKSEFGISPGTEHYLGLVG 422
G +P+ + ++V AC ++ +HF+ + S ++
Sbjct: 301 FGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSST-----------AVID 349
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ KCG L A+ +Q + F + W A+ IHG
Sbjct: 350 MYSKCGSLSFARTVFDQ-ISFRDSIS-WNAIIASYGIHG 386
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G + EA+ L +GV+ D+S + + + C + ++ + D+
Sbjct: 82 RRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVF 141
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ V+ +Y KCG M +A RVFD M R + W MI G A NG E + ++ QM K
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201
Query: 374 LQPNEQTFLAVFSAC 388
++ + L + AC
Sbjct: 202 VEGDGVVMLGLIQAC 216
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
K+H + + I G N K+I+ Y + G + AR+VFD +D+W+ MI Y+ G
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
E L L+ +M G++P+ T+ V AC + + E+ + G + +
Sbjct: 85 AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSG---EETWRQAVDQGYGDDVF 141
Query: 418 LG--LVGVLGKCGHLFEAQQFIEQ 439
+G ++ + KCG + EA + ++
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDK 165
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 220/402 (54%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G +E ++L + +G++ F C +N +++H ++
Sbjct: 395 ISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGH 454
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
L N +I MY +CG + A VF M SW+ MI A +G G + ++LFEQ
Sbjct: 455 DSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQ 514
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M K + P+ TFL + +AC A I+E +F++M + +GI+PG +HY L+ +L + G
Sbjct: 515 MMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAG 574
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+AQ I + +PFE A WEAL RIHG+++L A + +++L P + I +
Sbjct: 575 MFLKAQSVI-KSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILS 633
Query: 489 ---------------------PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
KK S ++ ++ + F R+P + L+
Sbjct: 634 NMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQ 693
Query: 523 AL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L N+MK+ YVPDT++VLHD++ E KE +L HSE+LA+ YG++ P +R+ KNLR
Sbjct: 694 QLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLR 753
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCHNA K +S++V RE++VRD KRFHHFK+G+CSCG+YW
Sbjct: 754 ICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 48/232 (20%)
Query: 272 GVKADASCFYTLFELCG--NPKW--YENAKKVHDYFLQSTIRGD----LVLNNKVIEMYG 323
G++ D + +L CG N K + ++VH Y L++ + L +NN +I Y
Sbjct: 278 GIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYT 337
Query: 324 KCGSMTDARRVFDHMADRSMDSWH-------------------------------LMING 352
K M +ARRVFD M R + SW+ +MI+G
Sbjct: 338 KYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISG 397
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFG 409
A NG G+EGL+LF QM+ GL+P + F +AC GS D ++ + + G
Sbjct: 398 LAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSG 457
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+S G L+ + +CG + E+ + + +P+ + W A+ HG
Sbjct: 458 LSAGN----ALITMYSRCG-VVESAESVFLTMPYVDSVS-WNAMIAALAQHG 503
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I Y + + AR + D + +W+ MI+GY GL +E F +M +G+Q
Sbjct: 221 TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280
Query: 376 PNEQTFLAVFSACGSAD 392
+E T+ ++ SACGS +
Sbjct: 281 EDEYTYTSLISACGSCN 297
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 220/387 (56%), Gaps = 32/387 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + D+ + T+ + E +VH +++ + D+V+ + +++MY KCG
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ-PNEQTFLAVFS 386
+ A R F+ M R+ SW+ MI+GYA +G G+E L+LFE M+ G P+ TF+ V S
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A +EE F HFESM +G++P EH+ + VLG+ G L + + FIE K+P +P
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIE-KMPMKPN 788
Query: 447 AEFWE-ALRNYARIHG-DIDLEDHAEELMVDLDPSKA---------------------DP 483
W L R +G +L A E++ L+P A
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 484 KKIPTPPPKKRTA---ISILDGKSRLV--EFRNPTLYRDDEKLKALN-QMKESTYVPDTR 537
KK+ KK +++ DG V + +P +KLK LN +M+++ YVP T
Sbjct: 849 KKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTG 908
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPART-PLRIIKNLRVCGDCHNAIKIMSRI 596
+ L+D++QE KE+ L YHSE+LA+A+ L + + T P+RI+KNLRVCGDCH+A K +S+I
Sbjct: 909 FALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKI 968
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR++I+RD+ RFHHF+DG CSC D+W
Sbjct: 969 EGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKCGSMTDARRVFDHMA 339
Y+L E G K ++VH + + + + +V + N ++ MY KCGS+ DARRVF M
Sbjct: 321 YSLAEEVGLKK----GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
D+ SW+ MI G NG E ++ ++ MR+ + P T ++ S+C S +
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
IH ES+K GI L+ + + G+L E ++
Sbjct: 437 IHGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD-SWHLMING 352
E K++H L++ I + N +I YGKCG M ++F MA+R + +W+ MI+G
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS--EFG 409
Y N L + L L M + G + + + V SA S +E +H S+++ E
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHA 469
+ G+ LV + KCG L A +F +P + + + YAR HG
Sbjct: 654 VVVGS----ALVDMYSKCGRLDYALRFF-NTMPVRNSYSWNSMISGYAR-HG------QG 701
Query: 470 EELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
EE + + K D + PP T + +L S
Sbjct: 702 EEALKLFETMKLDGQ----TPPDHVTFVGVLSACS 732
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ H ++ + D+ L N +I Y + G AR+VFD M R+ SW +++GY+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGISP 412
NG E L M K G+ N+ F++V AC ++ F IH K + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 413 GTEHYLGLVGVLGKC 427
+ L+ + KC
Sbjct: 140 VVSNV--LISMYWKC 152
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCG--NPKWYENAKKVHDYFLQSTIRGDLV 313
G+ KEA+ +++ +G+ ++ F ++ C +++H + + D V
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 314 LNNKVIEMYGKC-GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N +I MY KC GS+ A F + ++ SW+ +I+ Y+ G ++F M+
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 373 GLQPNEQTFLA-VFSAC 388
G +P E TF + V +AC
Sbjct: 201 GSRPTEYTFGSLVTTAC 217
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+S + DL + + ++ + K GS++ AR+VF+ M R+ + + ++ G G+E +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL-----G 419
LF M + + + ++++ + S+ EE + I+ G ++ G
Sbjct: 296 LFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 420 LVGVLGKCGHLFEAQQ 435
LV + KCG + +A++
Sbjct: 355 LVNMYAKCGSIADARR 370
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + KW + +++H L+ I ++ ++N ++ +Y + G + + R++F M + SW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 347 HLMINGYADNGLGD-EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
+ +I A + E + F ++ G + N TF +V SA S E IH ++
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHL 430
K+ TE+ L+ GKCG +
Sbjct: 545 KNNIADEATTEN--ALIACYGKCGEM 568
>gi|302774719|ref|XP_002970776.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
gi|300161487|gb|EFJ28102.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
Length = 750
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 218/405 (53%), Gaps = 36/405 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A + G EA L+ + + ADAS + CG+ E ++VH + +
Sbjct: 348 IAAYSEHGHCSEAFVLLKEMESAKMVADASSCVAFLQACGSLLALEAGQEVHGWITMKGL 407
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + N +++MYGKCGS+ +A VFD+M +++ SW+ M+ Y +G E +Q+F Q
Sbjct: 408 EQDVFVGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVEAYCSSGYSTEAIQVFLQ 467
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + G++PN +TF +V ACG A I E +H M S++ + P EHY VG+LG+ G
Sbjct: 468 MLQEGVKPNAKTFTSVLVACGHAGFIREGILHLVYMSSDYDVVPIAEHYACAVGLLGRSG 527
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
+ EA++++ +KLP + A W+AL RIHGD+D A E +++ P A
Sbjct: 528 WVKEAEEYV-KKLP-DAEASVWDALVTACRIHGDLDRGRSAAESLLECSPHAARSYAVVA 585
Query: 482 ----------DPKKIPTPPPKK-----RTAISILDGKSRLVEF-----RNPTLYRDDEKL 521
D ++ K R SIL G + EF R+ + +L
Sbjct: 586 GLYDALARSDDAARVRETMTSKGLTEERVTSSILVGNTTCHEFITADTRHKRIQGIHAEL 645
Query: 522 KALNQ-MKESTYVPD-TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
+ L Q + + Y PD ++ ++H+ +E ++++L YHSERLA+ G I PLRII+N
Sbjct: 646 EDLGQRIAKDGYAPDASKLLMHERAEEQRQESLFYHSERLAVGLGAIKIRGDCPLRIIRN 705
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRD-NKRFHHFKDGKCSCGDYW 623
R+C DCH AIK MS+ +GR +I+RD + + H F DG C+C DYW
Sbjct: 706 FRMCADCHTAIKFMSKAMGRTIILRDGSSQLHRFVDGHCACRDYW 750
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G++K ++EL K GV+ D+ T + C + V + ++ + +
Sbjct: 252 QNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCAASGNLHEGRMVAELVTVYGLQSNDL 311
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+N+ ++ MYGKCGS+ DARRVFD MA R W MI Y+++G E L ++M
Sbjct: 312 VNSSLVHMYGKCGSLDDARRVFDGMAHRGPVVWSKMIAAYSEHGHCSEAFVLLKEMESAK 371
Query: 374 LQPNEQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + + +A ACGS A+E +I + ++ + + LV + GKCG
Sbjct: 372 MVADASSCVAFLQACGSLLALEAGQEVHGWITMKGLEQDVFVGN------ALVDMYGKCG 425
Query: 429 HLFEA 433
+ EA
Sbjct: 426 SVEEA 430
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ CG+ + K++H + + + L N ++EMYGKCGS+ DARRVFD +
Sbjct: 16 SIVRACGSSRDLIAGKRIHAHIADANLGNYRFLANLLVEMYGKCGSLHDARRVFDSIHSP 75
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM 369
++ SW+L++ Y NG E Q FE+M
Sbjct: 76 NIFSWNLLVVAYTQNGRLREARQCFEKM 103
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 36/178 (20%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AK +H+ +Q I L L +++MY CGS+ +AR +FD + + + W +I YA
Sbjct: 158 AKIIHEQLVQMGIAEQLPLAKFIVQMYLSCGSLDEARNLFDLLPSKDVGMWTAVIAAYAK 217
Query: 356 NGLGDEGLQLFE-----------------------------------QMRKLGLQPNEQT 380
G E ++LFE +MR+ G++P+ T
Sbjct: 218 YGRWQEAIKLFETMESRTGPYSVLVWNAIISASFQNGQLKGSLELFWKMRRQGVRPDSLT 277
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
C ++ + E + E + + +G+ LV + GKCG L +A++ +
Sbjct: 278 LATALDTCAASGNLHEGRMVAE-LVTVYGLQSNDLVNSSLVHMYGKCGSLDDARRVFD 334
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 219/397 (55%), Gaps = 33/397 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G +EAI E+++K V+ D + C E A+ +++Y +S R D+
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++ +I+M+ KCGS+ AR VFD DR + W MI GY +G E + L+ M + G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN+ TFL + AC + + E + F M ++ I+P +HY ++ +LG+ GHL +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+ I + +P +P W AL + + H ++L ++A + + +DPS
Sbjct: 479 YEVI-KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAA 537
Query: 481 -------ADPK-KIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQ 526
A+ + ++ K S ++ + RL FR +P + +++ + ++
Sbjct: 538 ARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESR 597
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE +V + LHD++ E E+ L HSER+AIAYGLISTP TPLRI KNLR C +C
Sbjct: 598 LKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNC 657
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K++S++V RE++VRD RFHHFKDG CSCGDYW
Sbjct: 658 HAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 30/305 (9%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D+ F L + C + + VH + D+ + N +I +Y KC + AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 333 RVFDH--MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
VF+ + +R++ SW +++ YA NG E L++F QMRK+ ++P+ ++V +A
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+++ IH +K I P + + L + KCG + A+ ++ P
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEP--DLLISLNTMYAKCGQVATAKILFDKMK--SPNLIL 290
Query: 450 WEAL------RNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA-ISILDG 502
W A+ YAR A ++ ++ P I A + L+
Sbjct: 291 WNAMISGYAKNGYAR---------EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 503 KSRLVEFRNPTLYRDDEKLKA--LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLA 560
+ E+ + YRDD + + ++ + V R V D+ +++ + +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF---DRTLDRDVVVWSA--MI 396
Query: 561 IAYGL 565
+ YGL
Sbjct: 397 VGYGL 401
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYEN 295
P ++ + A ++ Q G+ EA+E+ + VK D ++ + +
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++ + + L + MY KCG + A+ +FD M ++ W+ MI+GYA
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
NG E + +F +M ++P+ + + SAC ++E+A SM G S +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGRSDYRD 356
Query: 416 HYL---GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + A+ ++ L + W A+ +HG
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV--WSAMIVGYGLHG 403
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K++H L ++ L K+I G +T AR+VFD + + W+ +I GY+ N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
+ L ++ M+ + P+ TF + AC ++ F+H + + F +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPF-EPTAEFWEAL 453
+ GL+ + KC L A+ E LP E T W A+
Sbjct: 158 N--GLIALYAKCRRLGSARTVFE-GLPLPERTIVSWTAI 193
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 217/404 (53%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G+ +EA+ L + +GVK + ++ C + + + H Y ++
Sbjct: 213 AMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERN 272
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+R L L +I+MY KCG+M A VF M ++++ +W I G A NG G++ L+LF
Sbjct: 273 KLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELF 332
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M++ +QPNE TF++V C +EE HFESM +GI P EHY +V + G+
Sbjct: 333 SLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGR 392
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------ 480
GHL EA FI +P P W AL N +I+ ++++ + A +V+L+
Sbjct: 393 AGHLDEALNFI-NSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVL 451
Query: 481 -----ADPK----------KIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
AD K + +K+ S+++ + EF +P
Sbjct: 452 LSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVM 511
Query: 521 LKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L +++ +K S YV +T V DI++E KE AL HSE++AIA+GLIS P+RI+KN
Sbjct: 512 LGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPIRIVKN 571
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH+A K++S+ RE++VRD RFHHF+DG+CSC YW
Sbjct: 572 LRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DLV ++ K G + AR++FD M+ + +W+ MI+GY G E L LF M+
Sbjct: 176 DLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQ 235
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEE---AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+ G++ NE + ++V SAC A+++ A + E K ++ GT L+ + KC
Sbjct: 236 REGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGT----ALIDMYAKC 291
Query: 428 GHLFEAQQFIEQKLPFEPTAEFW----EALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
G++ +A + FW + + ++ G + + E+ + K D
Sbjct: 292 GNMNKAMEV------------FWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQD- 338
Query: 484 KKIPTPPPKKRTAISILDGKS 504
+ P + T +S+L G S
Sbjct: 339 ----SVQPNEITFVSVLRGCS 355
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 233/406 (57%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G +EA++L + G++++ + ++ ++ ++VH + L++
Sbjct: 182 AIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA 241
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +VL N +I+MY KCGS+T +RR+FD M +R++ SW+ M+ GY+ +GLG E ++LF
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 301
Query: 367 EQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
+ M++ ++P+ TFLAV S C + I +E + + G P EHY +V +
Sbjct: 302 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 361
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ G + EA +FI +K+PFEPTA W +L R+H ++ + + +++++ A
Sbjct: 362 GRAGRVEEAFEFI-KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNY 420
Query: 485 KIPTPPPKK-------RTAISILDGKSRLVE------FRNPTLY----------RDDE-- 519
I + RT ++ K+ + E + TL+ R +E
Sbjct: 421 VILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVF 480
Query: 520 -KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
K++ L+ ++KE+ YVP+ VL+D+D E KE+ L HSE+LA+A+GLI TP TP+RII
Sbjct: 481 AKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRII 540
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCHN K +SR+ GRE+ +RD RFHH G CSCGDYW
Sbjct: 541 KNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G++ + + ++ C + ++VH + +++ + L ++I +Y KC + D
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
ARRV D M +R++ SW MI+GY+ G E L LF +M G PNE TF V ++C S
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 391 ADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ + IH +K+ F + ++G L+ + K G + EA++ + LP
Sbjct: 124 SSGFQLGRQIHSLVIKTSF----ESHIFVGSSLLDMYAKAGKICEARRVFD-GLPERDVV 178
Query: 448 EFWEALRNYARIHGD 462
+ YA++ D
Sbjct: 179 SCTAIISGYAQLGLD 193
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA +E++ G + F T+ C + ++ +++H ++++ +
Sbjct: 88 QRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIF 147
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY K G + +ARRVFD + +R + S +I+GYA GL +E L LF ++++ G
Sbjct: 148 VGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG 207
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++ N T+ +V +A A++ +H ++++ ++ L+ + KCG L
Sbjct: 208 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTY 265
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+++ + +P E T W A+ HG
Sbjct: 266 SRRIFDS-MP-ERTVISWNAMLVGYSKHG 292
>gi|302771608|ref|XP_002969222.1| hypothetical protein SELMODRAFT_91949 [Selaginella moellendorffii]
gi|300162698|gb|EFJ29310.1| hypothetical protein SELMODRAFT_91949 [Selaginella moellendorffii]
Length = 445
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 217/398 (54%), Gaps = 37/398 (9%)
Query: 260 GKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G KEA+ L MD +G+ AD F + + C + + +H L+S V++
Sbjct: 51 GDSKEAVILFRMMDLEGIPADGVAFAAVLDACASHSTLSDGAAIHASILESGFAISTVVS 110
Query: 316 NKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ MYGKCG + +AR +FD +A +R + W MI YA G G+ ++ F+ M G
Sbjct: 111 TGLVNMYGKCGRLREARAIFDAIAFRERDLVLWTSMIAAYAQWGRGEAAIEAFQSMLLDG 170
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ +E F++V AC A +E +F S++ ++ ++ G HY + +LGK G L EA
Sbjct: 171 IAADEVVFISVLCACSHAGLLELGCQYFASIEPDYRVAIGVHHYACAIDLLGKAGWLDEA 230
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI------- 486
+ IE ++PF+P W AL ++H D D + A E + LDP A P +
Sbjct: 231 ESLIE-RMPFDPDGACWTALLAACKLHKDGDRAERASERAMALDPDSAAPYALLVKIQGG 289
Query: 487 ------PTPPPKKRTAISILDGKSRLV------EF--------RNPTLYRDDEKLKALNQ 526
T +R ++ G S +V EF R +Y + E+L+A
Sbjct: 290 GEASEQTTRRRLERGVRKLVPGCSSIVVRDRVHEFTAGAMDHPRAAEIYEELERLRA--P 347
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+ E+ YVPDT V+ +D+ KE+ +L HSE+LA+A+GL++TPA +PLR++ NLR+C DC
Sbjct: 348 LAEAGYVPDTGVVIQAVDEREKERIVLAHSEKLAVAFGLLATPANSPLRVVNNLRMCSDC 407
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKD-GKCSCGDYW 623
H+A+K ++ I RE++VRD RFH F + G+CSCGDYW
Sbjct: 408 HSAMKFIASITRREIVVRDLIRFHRFDEQGRCSCGDYW 445
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y G + +AR + M SW +I YA G E + LF M G+
Sbjct: 10 NSLIMAYAHSGFVGEARNLLFAMPQWDPVSWTTVIAAYAAVGDSKEAVILFRMMDLEGIP 69
Query: 376 PNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+ F AV AC S + + A IH ++S F IS T GLV + GKCG L EA+
Sbjct: 70 ADGVAFAAVLDACASHSTLSDGAAIHASILESGFAIS--TVVSTGLVNMYGKCGRLREAR 127
Query: 435 QFIEQKLPFEPTAEFWEAL 453
+ E W ++
Sbjct: 128 AIFDAIAFRERDLVLWTSM 146
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 215/386 (55%), Gaps = 33/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D GVK D F + +C E+AK+ H ++ D+V N +++ Y K G
Sbjct: 167 EMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWG 226
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DAR VFD MA +++ SW+ +I GY ++G G E ++LFEQM + + PN TFLAV S
Sbjct: 227 RIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLS 286
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + E + F+SM + I P HY ++ ++G+ G L EA I + PF+PT
Sbjct: 287 ACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALI-RGAPFKPT 345
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKK 485
A W AL R++ + +L A E + ++P K +
Sbjct: 346 ANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHT 405
Query: 486 IPTPPPKKRTAISILDGKSRLVEF-----RNP---TLYRDDEKLKALNQMKESTYVPDTR 537
+ + R S ++ K R F R+P +Y+ +KL + ++ + YVP+ +
Sbjct: 406 LKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKL--MLEISKYGYVPNQK 463
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+L D+D++ +E+ LYHSE+LAIA+GLISTP PL+I++ R+CGDCH AIK+++R+
Sbjct: 464 TLLPDVDEQ-EERVRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVT 522
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE+++RD RFHHFK G CSC DYW
Sbjct: 523 GREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L G EA L ++ A + F + + +++H L+ I
Sbjct: 48 ISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGI 107
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ ++ +I+MY KCGS+ DAR VF+ M +++ W+ +I GYA +G +E L ++ +
Sbjct: 108 GDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYE 167
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA 397
MR G++ + TF + C ++E A
Sbjct: 168 MRDSGVKMDHFTFSMIVRICARLASVEHA 196
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D + N+V+ M+ KCG M DARR+FD M +R++ SW+ +I+G D G E +LF M
Sbjct: 9 DQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMW 68
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ TF + A + I +H ++K GI L+ + KCG
Sbjct: 69 EEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLK--MGIGDDIFVSCALIDMYSKCGS 126
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ E +F+ +++P E T W + +HG
Sbjct: 127 I-EDARFVFEEMP-EKTTVGWNTIIAGYALHG 156
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 218/397 (54%), Gaps = 33/397 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G +EA+ L + + +K D+ + E A+ + DY +S D+
Sbjct: 333 KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIF 392
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+N +I+MY KCGS+ ARRVFD +D+ + W MI GY +G G E + L+ M++ G
Sbjct: 393 VNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAG 452
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN+ TF+ + +AC + ++E + F MK +F I P EHY +V +LG+ G+L EA
Sbjct: 453 VFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DFEIVPRNEHYSCVVDLLGRAGYLGEA 511
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
FI K+P EP W AL + +I+ + L ++A + LDP
Sbjct: 512 CAFI-MKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYAS 570
Query: 479 -----SKADPKKIPTPPP-KKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ- 526
A + + K S+++ +L F +P ++L+ L +
Sbjct: 571 SCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERR 630
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE +VP T VLHD++ E KE+ L +HSER+A+AYGLIST T LRI KNLR C +C
Sbjct: 631 LKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNC 690
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK++S++V RE+IVRD RFHHFKDG CSCGDYW
Sbjct: 691 HSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV D F + + C + + +H ++ D+ + N ++ +Y KCG + A
Sbjct: 149 GVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVA 208
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+ VFD + R++ SW +I+GYA NG E L++F QMR G++P+ +++ A
Sbjct: 209 KVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDV 268
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
D +E+ IH +K G+ + L KCG + A+ F +Q
Sbjct: 269 DDLEQGRSIHGFVIK--MGLEDEPALLISLTAFYAKCGLVTVAKSFFDQ 315
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q GK EA+ + + GVK D ++ + E + +H + ++ + +
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + Y KCG +T A+ FD M ++ W+ MI+GYA NG +E + LF M
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFG--ISPGTEHYLGLVGVLGKCGHL 430
++P+ T + A ++E A ++ KS +G I T L+ + KCG +
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTS----LIDMYAKCGSV 407
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A++ ++ + W A+ +HG
Sbjct: 408 EFARRVFDRNS--DKDVVMWSAMIMGYGLHG 436
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H+ + S ++ + L K++ G + AR++FD + W+ +I Y+ N
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEH 416
+ + ++++ MR G+ P+ TF V AC D IH + +K FG ++
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 417 YLGLVGVLGKCGHLFEAQ 434
GLV + KCGH+ A+
Sbjct: 194 --GLVALYAKCGHIGVAK 209
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 204/378 (53%), Gaps = 28/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ +AS ++ C N K++H + ++ + +L + ++ MY KCG ++ A
Sbjct: 237 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSAC 296
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F M R + +W+ MI+GYA +G G E + LFE+M+ G++PN TF+ V +AC
Sbjct: 297 ILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTG 356
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ FE M+ +GI P +HY +V +L + G L A FI + +PFEP +
Sbjct: 357 LCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFI-RSMPFEPHPSAYGT 415
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L R++ +++ + A +++ DP A + +
Sbjct: 416 LLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTV 475
Query: 492 KKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQ 545
K S ++ K L EFR+ P LY EKL L + MKE YVPD +VLHD+D+
Sbjct: 476 VKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDE 535
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
K Q L+ HSE+LAIA+GLIST LRI KNLRVCGDCHNA K++S I RE+I+RD
Sbjct: 536 TMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHNAAKVISMIEDREIILRD 595
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHF+ G CSC DYW
Sbjct: 596 TTRFHHFRGGHCSCDDYW 613
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
++F + + D VL ++ Y G++ A + F+ M R++ SW+ ++ GY N D
Sbjct: 163 EWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHAD 222
Query: 361 EGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFG--ISPGT 414
+ L+LF M R+ +QPN T +V C + A+ F IH MK ++ GT
Sbjct: 223 DALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL--GFGKQIHQWCMKLLLSRNLTVGT 280
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
LV + KCG L A + + A W A+ + HGD
Sbjct: 281 S----LVSMYCKCGDLSSACILFGEMHTRDVVA--WNAMISGYAQHGD 322
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 222/398 (55%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EAI+L + ++ + +C + + K++H ++S +
Sbjct: 408 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 467
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N +I MY + GS ARR+FD + R +W MI A +G G+E + LFE+M +
Sbjct: 468 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 527
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ T++ V SAC A + E +++ +K+E I+P HY +V +L + G E
Sbjct: 528 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 587
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
AQ+FI +++P EP A W +L + R+H + +L + A E ++ +DP+ +
Sbjct: 588 AQEFI-RRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 646
Query: 482 ------DPKKI----PTPPPKKRTAISILDGKSRLVEF-RNPTLYRDDEKLKAL-----N 525
D +I +K T S +S++ F + ++ + + A+
Sbjct: 647 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 706
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K + +VPD + VLHD+D E KE+ L HSE+LAIA+GLISTP +T LR++KNLRVC D
Sbjct: 707 EIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCND 766
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK +S++ RE+IVRD RFHHF+DG CSC DYW
Sbjct: 767 CHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
ENA+++ D +++ + +++ ++E Y K G M AR +F M +R + +W MI GY
Sbjct: 349 ENARRIMDQSMETDL--NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
NG DE + LF M G +PN T AV S C S ++ IH +++S
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 41/247 (16%)
Query: 256 LCQEGKVKEAIE-LMDKGVKADASCFYTLFEL---CGNPKWYENAKKVHDYFLQSTIRGD 311
L + G+ EAI+ L+D +TL + C + +KVH + ++ +
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 312 LVLNNKVIEMYGKCGS-------------------------------MTDARRVFDHMAD 340
+ + N V+ MYGKCG M A +F+ M D
Sbjct: 199 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD 258
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
RS+ SW+ MI GY NGL + L+LF +M + + P+E T +V SAC + +
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 318
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP-TAEFWEALRNYA 457
+H +++E + + L+ K G + A++ ++Q + + F L Y
Sbjct: 319 VHAYILRTEMAYNSQVTN--ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 376
Query: 458 RIHGDID 464
+I GD++
Sbjct: 377 KI-GDME 382
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
E G +A+++ D R ++ N ++ M+ K G + DAR VF M +R
Sbjct: 73 ETAGGAGGLRDARRLFDEI--PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAV 130
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS--ADAIEEAFIHFE 402
SW +M+ G G E ++ M G P + T V S+C A A+ +H
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRK-VH-- 187
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S + G+ ++ + GKCG E + +++P + W A+ + G
Sbjct: 188 SFVVKLGLGSCVPVANSVLNMYGKCGD-SETATTVFERMPVRSVSS-WNAMVSLNTHLGR 245
Query: 463 IDLEDHAEELMVD 475
+DL + E M D
Sbjct: 246 MDLAESLFESMPD 258
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 219/400 (54%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EA+EL G + ++ + C + + + K++H ++S +
Sbjct: 591 QNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVS 650
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N +I +Y + GS+ ARRVFD + R +W MI A +GLG++ + LFE+M ++
Sbjct: 651 VSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRV 710
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ T++ V SAC A +++ ++E M++E GI P HY +V + + G L E
Sbjct: 711 GVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTE 770
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
A +FI Q++P P W +L R+ + DL + A ++ +DP +
Sbjct: 771 AHEFI-QRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYS 829
Query: 482 ------DPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D +I KK T S + ++ F + ++YR ++
Sbjct: 830 ACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEM-- 887
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
++K++ +VPD VLHD+D E KE+ L HSE+LAIA+GLISTP +T LRI+KNLRVC
Sbjct: 888 WEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVC 947
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH AIK +S+ V RE+IVRD RFHHF+DG CSC DYW
Sbjct: 948 NDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV- 334
DA ++ C N + + K++H Y L++ + + N +I Y K GS+ ARR+
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538
Query: 335 --------------------------------FDHMADRSMDSWHLMINGYADNGLGDEG 362
FD M +R + +W MI GY NG DE
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598
Query: 363 LQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
++LF M +G +PN T AV SAC S ++ IH ++++S
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS 643
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
VK ++++ +G + C + +KVH + ++ + + + N V+ M
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
YGKCG AR VF+ M RS+ SW++M++ Y G + + +FE M + + + T
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI-VSWNTI 450
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+A ++ G D + F F M S + P + VL C +L
Sbjct: 451 IAGYNQNG-LDGMALKF--FSRMLSASSMEPDA---FTVTSVLSACANL 493
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ +Y K G + DA VF M DR SW +MI G +G + ++ F M G
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P++ T V S+C + +A +H +K G+S ++ + GKCG A+
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVK--LGLSSCVPVANSVLYMYGKCGDAETAR 402
Query: 435 QFIEQ 439
E+
Sbjct: 403 AVFER 407
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 209/389 (53%), Gaps = 28/389 (7%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V +++ + G+K DA +L CG+ +++H Y + +R +L+L N +++M
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDM 350
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG + +AR VFD M R + SW M++ Y +G G + + LF +M G P+ F
Sbjct: 351 YAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAF 410
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
++V SAC +++ +F M ++GI P EH+ +V + G+ G + EA FI+Q +
Sbjct: 411 VSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ-M 469
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADPKK--- 485
P EP W AL + R+H +D+ A +L+ L P +KA K
Sbjct: 470 PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVM 529
Query: 486 -----IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKAL-NQMKESTYVP 534
+ KK IS ++ ++ F Y K L L +MKE Y+P
Sbjct: 530 NVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIP 589
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
T LHD++ E KE L HSE+LAI + +++T TP+RI KNLRVCGDCH AIK++S
Sbjct: 590 QTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLIS 649
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IV R +IVRD RFHHF +G CSCGDYW
Sbjct: 650 KIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VHD ++ + +L + N ++ MYGKCG + +AR+V D M R + SW+ M+ GYA +G
Sbjct: 158 QVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSG 217
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGIS 411
D+ L++ ++M L L + T +A S ++E +IH FE M + IS
Sbjct: 218 QFDDALEICKEMDSLNLNHDAGT-MASLSPVVCYTSLENVQYIHNMFERMTKKNLIS 273
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 213/388 (54%), Gaps = 32/388 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKC 325
E+ G + D F + C N K+VH ++S + + V +NN ++ MY KC
Sbjct: 336 EMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKC 395
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ DARRVFD M + + S + MI GYA +G+ E L+LFE M + + PN TF+AV
Sbjct: 396 GNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVL 455
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC +EE +F MK F I P EHY ++ +LG+ G L EA++ IE +PF P
Sbjct: 456 SACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIET-MPFNP 514
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------K 484
+ W L R HG+++L A + L+P A P +
Sbjct: 515 GSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKR 574
Query: 485 KIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL-KALNQMKESTYVPDTRY 538
+ KK+ S ++ ++ F +P + + K L +MK++ YVPD R+
Sbjct: 575 LMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRW 634
Query: 539 VL---HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
L +++ + +E+ LLYHSE+LA+A+GLIST P+ ++KNLR+CGDCHNA+K++S
Sbjct: 635 ALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISA 694
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ GRE+ VRD RFH FK+G CSC DYW
Sbjct: 695 LTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 117/218 (53%), Gaps = 10/218 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC- 325
E++ +G+K D ++ K ++ H ++S G+ + + +I++Y KC
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYAD-NGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
GSM + R+VF+ + + W+ MI+G++ L ++GL F +M++ G +P++ +F+ V
Sbjct: 293 GSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCV 352
Query: 385 FSACG--SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
SAC S+ ++ + +H ++KS+ + + + LV + KCG++ +A++ + +P
Sbjct: 353 TSACSNLSSPSLGKQ-VHALAIKSDVPYNRVSVNN-ALVAMYSKCGNVHDARRVFDT-MP 409
Query: 443 FEPTAEFWEALRNYARIHGDIDLED-HAEELMVDLDPS 479
T + YA+ HG +++E ELM++ D +
Sbjct: 410 EHNTVSLNSMIAGYAQ-HG-VEVESLRLFELMLEKDIA 445
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMAD---RSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+NN V+ Y + G +++ARRVF M + R SW+ MI + G E + LF +M
Sbjct: 176 VNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMV 235
Query: 371 KLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHY-LGLVGVLGKC- 427
+ GL+ + T +V +A D + H +KS F G H GL+ + KC
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGF---HGNSHVGSGLIDLYSKCA 292
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
G + E ++ E+ P W + + ++ D+
Sbjct: 293 GSMVECRKVFEEITA--PDLVLWNTMISGFSLYEDL 326
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 31/141 (21%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA-------- 331
F L + C + K +H + +S I L+N +Y KCGS+ +A
Sbjct: 12 FRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQ 71
Query: 332 -----------------------RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
RRVFD + + S++ +I YAD G L+LFE+
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEE 131
Query: 369 MRKLGLQPNEQTFLAVFSACG 389
+R+L L + T V +ACG
Sbjct: 132 VRELRLGLDGFTLSGVITACG 152
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 219/397 (55%), Gaps = 33/397 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G +EAI E+++K V+ D + C E A+ +++Y +S R D+
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++ +I+M+ KCGS+ AR VFD DR + W MI GY +G E + L+ M + G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN+ TFL + AC + + E + F M ++ I+P +HY ++ +LG+ GHL +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+ I + +P +P W AL + + H ++L ++A + + +DPS
Sbjct: 479 YEVI-KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAA 537
Query: 481 -------ADPK-KIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQ 526
A+ + ++ K S ++ + RL FR +P + +++ + ++
Sbjct: 538 ARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESR 597
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE +V + LHD++ E E+ L HSER+AIAYGLISTP TPLRI KNLR C +C
Sbjct: 598 LKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNC 657
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K++S++V RE++VRD RFHHFKDG CSCGDYW
Sbjct: 658 HAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 126/305 (41%), Gaps = 30/305 (9%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D+ F L + C + + VH + D+ + N +I +Y KC + AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 333 RVFDH--MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
VF+ + +R++ SW +++ YA NG E L++F MRK+ ++P+ ++V +A
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTC 234
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+++ IH +K I P + + L + KCG + A+ ++ P
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEP--DLLISLNTMYAKCGQVATAKILFDKMK--SPNLIL 290
Query: 450 WEAL------RNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA-ISILDG 502
W A+ YAR A ++ ++ P I A + L+
Sbjct: 291 WNAMISGYAKNGYAR---------EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 503 KSRLVEFRNPTLYRDDEKLKA--LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLA 560
+ E+ + YRDD + + ++ + V R V D+ +++ + +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF---DRTLDRDVVVWSA--MI 396
Query: 561 IAYGL 565
+ YGL
Sbjct: 397 VGYGL 401
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 13/229 (5%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYEN 295
P ++ + A ++ Q G+ EA+E+ VK D ++ + +
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++ + + L + MY KCG + A+ +FD M ++ W+ MI+GYA
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
NG E + +F +M ++P+ + + SAC ++E+A SM G S +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGRSDYRD 356
Query: 416 HYL---GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + A+ ++ L + W A+ +HG
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV--WSAMIVGYGLHG 403
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K++H L ++ L K+I G +T AR+VFD + + W+ +I GY+ N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
+ L ++ M+ + P+ TF + AC ++ F+H + + F +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPF-EPTAEFWEAL 453
+ GL+ + KC L A+ E LP E T W A+
Sbjct: 158 N--GLIALYAKCRRLGSARTVFE-GLPLPERTIVSWTAI 193
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 222/398 (55%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EAI+L + ++ + +C + + K++H ++S +
Sbjct: 408 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSS 467
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N +I MY + GS ARR+FD + R +W MI A +G G+E + LFE+M +
Sbjct: 468 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 527
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ T++ V SAC A + E +++ +K+E I+P HY +V +L + G E
Sbjct: 528 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 587
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
AQ+FI +++P EP A W +L + R+H + +L + A E ++ +DP+ +
Sbjct: 588 AQEFI-RRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 646
Query: 482 ------DPKKI----PTPPPKKRTAISILDGKSRLVEF-RNPTLYRDDEKLKAL-----N 525
D +I +K T S +S++ F + ++ + + A+
Sbjct: 647 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 706
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K + +VPD + VLHD+D E KE+ L HSE+LAIA+GLISTP +T LR++KNLRVC D
Sbjct: 707 EIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCND 766
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK +S++ RE+IVRD RFHHF+DG CSC DYW
Sbjct: 767 CHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
ENA+++ D +++ + +++ ++E Y K G M AR +F M +R + +W MI GY
Sbjct: 349 ENARRIMDQSMETDL--NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
NG DE + LF M G +PN T AV S C S ++ IH +++S
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 41/247 (16%)
Query: 256 LCQEGKVKEAIE-LMDKGVKADASCFYTLFEL---CGNPKWYENAKKVHDYFLQSTIRGD 311
L + G+ EAI+ L+D +TL + C + +KVH + ++ +
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW--------HL--------------- 348
+ + N V+ MYGKCG A VF+ M RS+ SW HL
Sbjct: 199 VPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPG 258
Query: 349 --------MINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
MI GY NGL + L+LF +M + + P+E T +V SAC + +
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 318
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP-TAEFWEALRNYA 457
+H +++E + + L+ K G + A++ ++Q + + F L Y
Sbjct: 319 VHAYILRTEMAYNSQVTN--ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 376
Query: 458 RIHGDID 464
+I GD++
Sbjct: 377 KI-GDME 382
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
E G +A+++ D R ++ N ++ M+ K G + DAR VF M +R
Sbjct: 73 ETAGGAGGLRDARRLFDEI--PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAV 130
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS--ADAIEEAFIHFE 402
SW +M+ G G E ++ M G P + T V S+C A A+ +H
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRK-VH-- 187
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S + G+ ++ + GKCG E + +++P + W A+ + G
Sbjct: 188 SFVVKLGLGSCVPVANSVLNMYGKCGDA-ETASTVFERMPVRSVSS-WNAMVSLNTHLGR 245
Query: 463 IDLEDHAEELM 473
+DL + E M
Sbjct: 246 MDLAESLFESM 256
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 212/395 (53%), Gaps = 32/395 (8%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E VK ++ G++ D ++ C N E + H L S + + ++N
Sbjct: 357 SEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNA 416
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ +YGKCGS+ D+ R+F+ ++ + +W +++GYA G +E + LFE M GL+P+
Sbjct: 417 LVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TF+ V SAC A +E+ FESM +E GI P +HY ++ + + G + EA+ FI
Sbjct: 477 KVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 536
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------------- 483
K+PF P A W L + R +G++D+ A E +++LDP
Sbjct: 537 -NKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKW 595
Query: 484 -------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPT---LYRDDEKLKALNQMK 528
K + +K S + K+++ F NP +Y + EKL +M
Sbjct: 596 EEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNY--KMI 653
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ YVPD VLHD+ K + L +HSE+LAIA+GL+ P P+R++KNLRVC DCHN
Sbjct: 654 KEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHN 713
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +S+I RE++VRD RFH FKDG CSCGD+W
Sbjct: 714 ATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 22/258 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G ++AI E+ + ++ D F ++ CG + K+VH Y +++ + ++
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY KC ++ A VF M +++ SW M+ GY NG +E ++ F M+K G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 374 LQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P++ T +V S+C + ++EE A H ++ S G+ LV + GKCG + +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTS--GLISFITVSNALVTLYGKCGSIED 429
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
+ + + + F+ + + YA+ A E + + A K P
Sbjct: 430 SHRLFNE-ISFKDEVTWTALVSGYAQF-------GKANETIGLFESMLAHGLK-----PD 476
Query: 493 KRTAISILDGKSR--LVE 508
K T I +L SR LVE
Sbjct: 477 KVTFIGVLSACSRAGLVE 494
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V+ N +I +CG + D++R+F M +R SW MI G+ NGL + + +F +M+
Sbjct: 208 NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMK 267
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
LQ ++ TF +V +ACG A++E
Sbjct: 268 LENLQMDQYTFGSVLTACGGVMALQEG 294
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ L +LC + AK +H + +++ + L N +I Y K GS+ A +VFD M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACG 389
++ SW+ +++ Y+ G E LF+ M R+ G+ N + ++ ++ CG
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWN--SLISGYAGCG 120
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 233/406 (57%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G +EA++L + G++++ + ++ ++ ++VH + L++
Sbjct: 649 AIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA 708
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +VL N +I+MY KCGS+T +RR+FD M +R++ SW+ M+ GY+ +GLG E ++LF
Sbjct: 709 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 768
Query: 367 EQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
+ M++ ++P+ TFLAV S C + I +E + + G P EHY +V +
Sbjct: 769 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 828
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ G + EA +FI +K+PFEPTA W +L R+H ++ + + +++++ A
Sbjct: 829 GRAGRVEEAFEFI-KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNY 887
Query: 485 KIPTPPPKK-------RTAISILDGKSRLVE------FRNPTLY----------RDDE-- 519
I + RT ++ K+ + E + TL+ R +E
Sbjct: 888 VILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVF 947
Query: 520 -KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
K++ L+ ++KE+ YVP+ VL+D+D E KE+ L HSE+LA+A+GLI TP TP+RII
Sbjct: 948 AKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRII 1007
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCHN K +SR+ GRE+ +RD RFHH G CSCGDYW
Sbjct: 1008 KNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 9/244 (3%)
Query: 223 HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI-ELMDKGVKADASCFY 281
H+ L+++ N ++ P + DL LC ++KEA+ E+ +G++ + +
Sbjct: 422 HRPKQVLSSISNPFSRQRILLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYD 481
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C + ++VH + +++ + L ++I +Y KC + DARRV D M +R
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IH 400
++ SW MI+GY+ G E L LF +M G PNE TF V ++C S+ + IH
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 401 FESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+K+ F + ++G L+ + K G + EA++ + LP + YA+
Sbjct: 602 SLVIKTSF----ESHIFVGSSLLDMYAKAGKICEARRVFD-GLPERDVVSCTAIISGYAQ 656
Query: 459 IHGD 462
+ D
Sbjct: 657 LGLD 660
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA +E++ G + F T+ C + ++ +++H ++++ +
Sbjct: 555 QRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIF 614
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY K G + +ARRVFD + +R + S +I+GYA GL +E L LF ++++ G
Sbjct: 615 VGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG 674
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++ N T+ +V +A A++ +H ++++ ++ L+ + KCG L
Sbjct: 675 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTY 732
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+++ + +P E T W A+ HG
Sbjct: 733 SRRIFDS-MP-ERTVISWNAMLVGYSKHG 759
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 222/398 (55%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EAI+L + ++ + +C + + K++H ++S +
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 361
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++N +I MY + GS ARR+FD + R +W MI A +G G+E + LFE+M +
Sbjct: 362 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 421
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ T++ V SAC A + E +++ +K+E I+P HY +V +L + G E
Sbjct: 422 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 481
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
AQ+FI +++P EP A W +L + R+H + +L + A E ++ +DP+ +
Sbjct: 482 AQEFI-RRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540
Query: 482 ------DPKKI----PTPPPKKRTAISILDGKSRLVEF-RNPTLYRDDEKLKAL-----N 525
D +I +K T S +S++ F + ++ + + A+
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K + +VPD + VLHD+D E KE+ L HSE+LAIA+GLISTP +T LR++KNLRVC D
Sbjct: 601 EIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCND 660
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK +S++ RE+IVRD RFHHF+DG CSC DYW
Sbjct: 661 CHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
ENA+++ D +++ + +++ ++E Y K G M AR +F M +R + +W MI GY
Sbjct: 243 ENARRIMDQSMETDL--NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
NG DE + LF M G +PN T AV S C S ++ IH +++S
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 354
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 41/247 (16%)
Query: 256 LCQEGKVKEAIE-LMDKGVKADASCFYTLFEL---CGNPKWYENAKKVHDYFLQSTIRGD 311
L + G+ EAI+ L+D +TL + C + +KVH + ++ +
Sbjct: 33 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 92
Query: 312 LVLNNKVIEMYGKCGS-------------------------------MTDARRVFDHMAD 340
+ + N V+ MYGKCG M A +F+ M D
Sbjct: 93 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD 152
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
RS+ SW+ MI GY NGL + L+LF +M + + P+E T +V SAC + +
Sbjct: 153 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 212
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP-TAEFWEALRNYA 457
+H +++E + + L+ K G + A++ ++Q + + F L Y
Sbjct: 213 VHAYILRTEMAYNSQVTN--ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 270
Query: 458 RIHGDID 464
+I GD++
Sbjct: 271 KI-GDME 276
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 7/157 (4%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
M+ K G + DAR VF M +R SW +M+ G G E ++ M G P + T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 381 FLAVFSACGS--ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
V S+C A A+ +H S + G+ ++ + GKCG E +
Sbjct: 61 LTNVLSSCAVTQAGAVGRK-VH--SFVVKLGLGSCVPVANSVLNMYGKCGD-SETATTVF 116
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+++P + W A+ + G +DL + E M D
Sbjct: 117 ERMPVRSVSS-WNAMVSLNTHLGRMDLAESLFESMPD 152
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 214/385 (55%), Gaps = 30/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D GVK D F + +C AK+VH +++ D+V N +++ Y K G
Sbjct: 324 EMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWG 383
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DAR VFD M+ R++ SW+ +I GY ++G G+E + +FE+M + G+ PN TFLAV S
Sbjct: 384 KVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLS 443
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + E + F+SM + + P H+ ++ +LG+ G L EA I +K PF+PT
Sbjct: 444 ACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALI-RKAPFQPT 502
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPP 491
A W AL R+HG+++L A E + ++P K +
Sbjct: 503 ANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQT 562
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKALNQMKEST-------YVPDTR-Y 538
KR + +L S + P + +K K + ++ E YVP+ + +
Sbjct: 563 LKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNF 622
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
+L D+D E +E+ +YHSE+LAIAYGL++T +TPL+I+++ R+C DCH+ IK+++ I
Sbjct: 623 MLPDVD-ENEEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITK 681
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+++RD RFHHF+DG CSCGDYW
Sbjct: 682 REIVIRDASRFHHFRDGSCSCGDYW 706
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H +++ + D+ ++ +I+MY KCGS+ DA VFD M D+++ W+ +I GYA
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGI 410
+G +E L L+ +MR G++ + TF + C ++ A +H +++ FG+
Sbjct: 312 HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGL 367
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 256 LCQEGKVKEAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
LC+ K ++A+E+ ++ G S + L C K K++ +Y + +
Sbjct: 108 LCK--KYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEP 165
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D + N+V+ M+ KCG M DA R+FD M R+ SW +I+GY D+G E +LF MR
Sbjct: 166 DQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMR 225
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ +TF + A + I +H ++K+ G+ L+ + KCG
Sbjct: 226 EEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKA--GLGQDIFVSCALIDMYSKCGS 283
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L +A ++ +P + T W ++ +HG
Sbjct: 284 LEDAHCVFDE-MP-DKTIVGWNSIIAGYALHG 313
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 211/405 (52%), Gaps = 33/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G K A+ L ++G + D F + C + +H +
Sbjct: 31 AMIAGYAQNGHCKAALHLFRAMNNEGQRCDMVTFVAAIDACAGLSALVAGRSLHSIAAAA 90
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + ++ ++ MY KCG++ DA VF + ++++ SW MI + NG D L F
Sbjct: 91 GLVAHVEISTAIVNMYAKCGNLDDATIVFSSIRNKNLISWSTMITAFVQNGHTDRALDAF 150
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M GL P+ TF ++ SAC A E F HF+ + +FGI+P +H+ +V +LG+
Sbjct: 151 LAMNVDGLFPDAVTFKSILSACSHAGLFEHGFFHFDLLVHDFGITPTMDHFKCMVDLLGR 210
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------- 479
G L EA++ + Q +PF P W L R+H ++ A E++++L
Sbjct: 211 SGRLLEAEELV-QTMPFVPDDVTWNTLLAACRVHKSVERGKRAAEVLLELTSEIPGYYVL 269
Query: 480 ----------KADPKKI----PTPPPKKRTAISILDGKSRLVEF------RNPTLYRDDE 519
A+ K+ +K+ S ++ R EF ++P + E
Sbjct: 270 LSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQILE 329
Query: 520 KLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+LK L+ MKE YVPDT VL ++++ KE L +HSE+LAIA GLISTP T LR++K
Sbjct: 330 ELKRLSVLMKEDGYVPDTTEVLRLVNEDEKESLLFFHSEKLAIACGLISTPPGTTLRVVK 389
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH+A K +S+I GR++IVRD RFHH ++G CSCGDYW
Sbjct: 390 NLRVCSDCHSATKFISKITGRKIIVRDLNRFHHTENGVCSCGDYW 434
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y + G M A+ FD R+ SW+ MI GYA NG L LF M G + +
Sbjct: 1 MIAAYARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRCD 60
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
TF+A AC A+ A S+ + G+ E +V + KCG+L +A
Sbjct: 61 MVTFVAAIDACAGLSAL-VAGRSLHSIAAAAGLVAHVEISTAIVNMYAKCGNLDDA 115
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 221/405 (54%), Gaps = 38/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK KEAI L K GVK + + C + + ++H+Y +
Sbjct: 232 IAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGF 291
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++ ++N +I+MY KCG + +A +VF+ M +R++ SW MI G A +G +E L+LF
Sbjct: 292 KRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSD 351
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M ++G++PN TF+ + AC I E F SM ++GI P EHY +V +L + G
Sbjct: 352 MSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAG 411
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA +FI +P +P W AL R+H ++++ + A + +++LDP
Sbjct: 412 LLHEAHEFI-LNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLS 470
Query: 479 ----------SKADPKKIPTPPPKKRT----AISILDGKSRLVEF-RNPTLYRDDEKL-- 521
A +K K+T +I++ DG EF + D E++
Sbjct: 471 NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV-DGVVH--EFVAGEESHPDTEQIFQ 527
Query: 522 ---KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+ L +M+ YVP+T VL DI++ K + + HSE+LA+ +GL++TPA TP+RI+K
Sbjct: 528 RWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMK 587
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLR+C DCH+A K++S IV RE++VRD RFH F D CSC DYW
Sbjct: 588 NLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 37/236 (15%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF------ 335
++ C N N + +H + R +L L N ++ +Y CG M +AR +F
Sbjct: 133 SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192
Query: 336 ----------------DH---------MADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DH M +R++ SW MI GY G E + LF +M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G++ NE T +AV +AC A++ + + G L+ + KCG L
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLG-MRIHEYSNRHGFKRNVRISNTLIDMYVKCGCL 311
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
EA + E+ E T W A+ +HG + A L D+ +P +
Sbjct: 312 EEACKVFEEME--ERTVVSWSAMIGGLAMHGR---AEEALRLFSDMSQVGIEPNGV 362
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 220/395 (55%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ KEA+E+ + + + ++ C N + + VH Y +++I+ D VL
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + VF+ M +R + +W+ MI G A +G ++ L+LF ++++ ++
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMK 392
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN T + V +AC A +++ F++M+ +G+ P EHY +V +LG+ G EA+
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAED 452
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
I +P +P A W AL RIHG+ DL + +++++L+P +
Sbjct: 453 LINS-MPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVG 511
Query: 482 ---DPKKI----PTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ-MK 528
D KI K +SI+D + EF+ +P + KLK + + ++
Sbjct: 512 RFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQ 571
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ + PDT VL DID+E KE A+ YHSE+LAIA+GLI+T + I+KNLRVC DCH+
Sbjct: 572 MAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHS 631
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K++S+I RE+IVRD R+HHFK+G CSC D+W
Sbjct: 632 ATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G++++A ++ G ++D C+ T+ + E AK + F Q ++ ++ N +I
Sbjct: 181 GRLEDARKMFYSG-ESDVVCWNTMIDGYLKCGVLEAAKGL---FAQMPVK-NIGSWNVMI 235
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
K G++ DAR++FD M++R SW M++GY G E L++F+QM++ +P
Sbjct: 236 NGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRF 295
Query: 380 TFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+V +AC + AI++ A++ S+K + + GT L+ + KCG L
Sbjct: 296 ILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVL--GT----ALLDMYAKCGRLDMGW 349
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ E+ E W A+ IHG + A EL L + P I
Sbjct: 350 EVFEEMKEREIFT--WNAMIGGLAIHGR---AEDALELFSKLQEGRMKPNGI 396
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 213/398 (53%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDKGVKADASCF-----YTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EA ++ + +K F T+ + K +HD ++ + D+
Sbjct: 263 QSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ +I+MY KCG + AR FD M ++++ SW MI GY +G + L+LF M
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++PN TF++V +AC A + + F +MK FG+ PG EHY +V +LG+ G L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------A 481
A I QK+ EP + W +L RIH +++L + + + +LDPS A
Sbjct: 443 AYDLI-QKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYA 501
Query: 482 DPKKIPTPPPKKRT----------AISILDGKSRLVEF-----RNPTLYRDDEKLKALN- 525
D + + T S+L+ + F +P + E L LN
Sbjct: 502 DSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++ E+ YV +T V HD+D+E KE L HSE+LAIA+G+++T + + ++KNLRVC D
Sbjct: 562 KLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSD 621
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CHN IK++S+IV RE +VRD KRFHHFKDG CSCGDYW
Sbjct: 622 CHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ADLAR + A M K + S F + C + + K+ H
Sbjct: 48 IADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGY 107
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D+ +++ +I MY CG + DAR+VFD + R++ SW MI GY NG + + LF+
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 369 MRKLGLQPNEQTFL------AVFSACG--SADAIEEAFIHFESMKSEF--GISPG 413
+ + FL +V SAC +A + E+ IH +K F G+S G
Sbjct: 168 LLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTES-IHSFVIKRGFDRGVSVG 221
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 334 VFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F+ D++ + SW+ +I A +G E L+ F MRKL L P +F AC S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 393 AI-------EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
I ++AF+ FG L+ + CG L +A++ ++ +P
Sbjct: 91 DIFSGKQTHQQAFV--------FGYQSDIFVSSALIVMYSTCGKLEDARKVFDE-IPKRN 141
Query: 446 TAEFWEALRNY 456
+ +R Y
Sbjct: 142 IVSWTSMIRGY 152
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG--S 327
D + D+ ++ C + +H + ++ + + N +++ Y K G
Sbjct: 176 DATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ AR++FD + D+ S++ +++ YA +G+ +E +F ++ K
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIK 279
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 218/409 (53%), Gaps = 44/409 (10%)
Query: 253 LARLCQEGKVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
+A Q G +A+ L K +K +A + C + + K +H+ ++
Sbjct: 267 IALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRM 326
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + V++MY KCG + AR+ F + ++++ SW MI GY +G G E L +F
Sbjct: 327 GLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIF 386
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M + G PN TF++V +AC A +++ + +MK FGI PG EHY +V +LG+
Sbjct: 387 NEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGR 446
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------ 480
G L EA I++ + +P A W AL + RIH +++L + + + + +LD +
Sbjct: 447 AGCLDEAYGLIKE-MKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVL 505
Query: 481 --------------------ADPKKIPTPPPKKRTAISILDGKSRLVEFRNPT------L 514
+ I PP L G++ L + + +
Sbjct: 506 LSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVE---LKGRTHLFYVGDKSHPQHKEI 562
Query: 515 YRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPL 574
Y KL L +M+E+ YVP+T VLHD+D+E K AL HSE+LAIA+ L+++ + +
Sbjct: 563 YSYLGKL--LEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVI 620
Query: 575 RIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IKNLRVC DCH AIK++++I RE+IVRD +RFHHFKDG CSCGDYW
Sbjct: 621 HVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCG--SMTDARRVFDHMADRSMDSWHLMINGYADN 356
+H +++ + GD + N +++ Y K G + AR+VFD M ++ + SW+ MI YA N
Sbjct: 215 LHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQN 273
Query: 357 GLGDEGLQLFEQMRKL--GLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGIS 411
G+ + L L+ +M + ++ N T A+ AC A I+ IH M E +
Sbjct: 274 GMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVY 333
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
GT +V + KCG + A++ QK+ E W A+ +HG
Sbjct: 334 VGTS----VVDMYSKCGRVEMARKAF-QKIK-EKNILSWSAMITGYGMHG 377
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 213/392 (54%), Gaps = 33/392 (8%)
Query: 264 EAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA++L +GV+ ++ +C + ++VH + ++ D+ + + ++
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MY KCG + A+ VFD + + + W+ +I+GYA +GLG+E L++F +M G PN+
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
T +A+ +AC A +EE FESM+S+F ++P EHY V +LG+ G + +A + IE
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--------------LMVDLDPSKADPKK 485
+ +P A W AL + H +DL + A + L+ ++ S++
Sbjct: 494 -MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGD 552
Query: 486 IPTPPPKKRT-------AISILDGKSRLVEFRNPTLYRDDEKLKALNQM-------KEST 531
+ RT S ++ ++ F + E+ L + +E+
Sbjct: 553 VAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAG 612
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y PD +VLHD+D+E K +L HSERLA+AYGL+ P P+R++KNLRVCGDCH AIK
Sbjct: 613 YSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIK 672
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S++ RE+I+RD RFHHF +G+CSC DYW
Sbjct: 673 LISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 32/231 (13%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYT-------------- 282
+ P D V S + LC+EG+V EA + D+ + + + T
Sbjct: 165 DMMPVKDVV--ASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 283 --LFELC---GNPKW------YENAKKVHDY--FLQSTIRGDLVLNNKVIEMYGKCGSMT 329
LFE+ W Y + ++ D F + ++ N +I +G+ G ++
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEIS 282
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
ARRVFD M DR +W MI Y G E L LF QM+K G++P+ + +++ S C
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 390 SADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ +++ +H ++ +F L + V KCG L +A+ ++
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV--KCGELVKAKLVFDR 391
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
QEG V EA L + + + + +F + + A+K++D D+V +
Sbjct: 122 QEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTN 177
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I + G + +AR +FD M +R++ +W MI GY N D +LFE M +
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKT 233
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESM 404
E ++ ++ + IE+A FE M
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
I + G + +AR+ FD + +++ SW+ +++GY NGL E QLF++M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM 74
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 252 DLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+++RL + GK+ EA + D K + + S F G PK A+++ D +
Sbjct: 23 EISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFS-NGLPK---EARQLFDEMSERN 78
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ V N ++ Y K + +AR VF+ M +R++ SW M+ GY G+ E LF
Sbjct: 79 V----VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+M + NE ++ +F I++A
Sbjct: 135 RMP----ERNEVSWTVMFGGLIDDGRIDKA 160
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 229/398 (57%), Gaps = 36/398 (9%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++EA++ +M D F + C + E ++H + L+S + D+V+
Sbjct: 667 GHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVE 726
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ +++MY KCG + A +VF M+ ++ SW+ MI+GYA +GLG + L++FE+M++ G
Sbjct: 727 SALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGES 786
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF++V SAC A +E +FE M+ ++GI P EHY ++ +LG+ G L + Q+
Sbjct: 787 PDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQE 845
Query: 436 FIEQKLPFEPTAEFWEALR---NYARIHGDIDLEDHAEELMVDLDP-------------- 478
++ +++P +P W + ++ IDL A ++++L+P
Sbjct: 846 YM-KRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHA 904
Query: 479 ----------SKADPKKIPTPPPKKRTAISILDGKSRLV--EFRNPTLYRDDEKLKALNQ 526
++A K R+ +++ DG + + +P EKL L Q
Sbjct: 905 AIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 964
Query: 527 -MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++ + YVP T YVLHD+++E KE+ L YHSE+LA+A+ L + + P+RI+KNLRVCGD
Sbjct: 965 KIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGD 1024
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH A + +S+IVGR++I+RD+ RFHHFKDGKCSCGDYW
Sbjct: 1025 CHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H ++ + DL L N ++ Y K + ARRVFD M R+ SW +I+G+ +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 357 GLGDEGLQLFEQMRKL--GLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGIS 411
GL ++ LF M + G +P TF +V AC + F +H K+EF +
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEF--T 202
Query: 412 PGTEHYLGLVGVLGKC 427
T L+ + G C
Sbjct: 203 SNTTVCNALISMYGSC 218
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMING 352
E K++H L+ + D ++N ++ Y K G + R+F M+ R SW+ MI+G
Sbjct: 603 ELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGIS 411
Y NG E + M + TF V +AC S A+E +H ++S
Sbjct: 663 YIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESD 722
Query: 412 PGTEHYLGLVGVLGKCGHL-FEAQQF--IEQKLPFEPTAEFWEAL-RNYARIHGDIDLED 467
E LV + KCG + + ++ F + QK F W ++ YAR HG L
Sbjct: 723 VVVES--ALVDMYSKCGRIDYASKVFHSMSQKNEFS-----WNSMISGYAR-HG---LGR 771
Query: 468 HAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSR--LVE 508
A E+ ++ S P + T +S+L S LVE
Sbjct: 772 KALEIFEEMQESGESPDHV--------TFVSVLSACSHAGLVE 806
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 296 AKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
++VH + L++ I + ++N ++ MY KCG++ A RVF M R SW+ +I
Sbjct: 401 GREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALD 460
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPG 413
NG + + + MR+ + P+ ++ S+C + +H +++K +G+
Sbjct: 461 QNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK--WGLYLD 518
Query: 414 TEHYLGLVGVLGKCGHLFEAQQF 436
T LV + G+CG + E +
Sbjct: 519 TSVSNALVKMYGECGRMSECWEI 541
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQLFEQM 369
D ++N +++MYG+CG M++ +F+ M+ + SW+ ++ A + E +Q+F M
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNM 577
Query: 370 RKLGLQPNEQTFLAVFSA 387
K GL PN+ TF+ +A
Sbjct: 578 MKSGLVPNKVTFVNFLAA 595
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 272 GVKADASCFYTLFELC--GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC--GS 327
G + + F ++ C P A +VH ++ + + N +I MYG C G
Sbjct: 163 GCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGP 222
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR----KLGLQPNEQTFLA 383
A+RVFD R + +W+ +++ YA G LF M+ + L+P E TF +
Sbjct: 223 PILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGS 282
Query: 384 VFSA 387
+ +A
Sbjct: 283 LITA 286
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 221/397 (55%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EAI L + G++ + C K++H + L++ + D+
Sbjct: 388 QNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF 447
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++ +I+MY K G + ++R+FD + ++ + SW+++I GY +G G E L+LFE+M +LG
Sbjct: 448 VSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG 507
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+P++ TF + AC A +E+ +F M + I P EHY +V +LG+ G + +A
Sbjct: 508 LKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDA 567
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PP 490
+ IE+ +P +P + W +L + RIHG++ L + +++L+P K + + +
Sbjct: 568 LRLIEE-MPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAG 626
Query: 491 PKKRTAISILDGKSRLVEFRNPT-------------LYRDDEKLKALNQMKES------- 530
K + + G+ + + + DE L L +++E+
Sbjct: 627 SGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVK 686
Query: 531 ----TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
Y PDT VLHD+++E K L HSE+LAI++GL++T P+R+ KNLR+CGDC
Sbjct: 687 ISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDC 746
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNA K +S++V R+++VRDNKRFHHF+DG CSCGDYW
Sbjct: 747 HNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 249 SVADLARLCQEGKVKEAIELMDK---GVKADAS----CFYTLFELCGNPKWYENAKKVHD 301
S+ ++ +LC+ G +KEA++ + + V D++ L + CG K E +++H+
Sbjct: 70 SLHEIKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHE 129
Query: 302 YFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
ST D VLN ++I MY CGS +D+R VFD + +++ W+ +++ Y N L +
Sbjct: 130 MVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFE 189
Query: 361 EGLQLFEQMRKLGL-QPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ + +F ++ + +P+ T V AC G D IH + K + ++ ++
Sbjct: 190 DAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDL----VSDVFV 245
Query: 419 G--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G L+ + GKCG + EA + + + T W AL
Sbjct: 246 GNALIAMYGKCGLVEEAVKRVFDLMD-TKTVSSWNAL 281
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ D G+ D +L C K +++H + L++ + D + ++ +Y C
Sbjct: 299 LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICC 358
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G A+ +FD M RS+ SW++MI GY+ NGL DE + LF QM G+QP E + V
Sbjct: 359 GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVC 418
Query: 386 SACGSADAI 394
AC A+
Sbjct: 419 GACSQLSAL 427
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA-RRVFDHMADRSMDSWHLMINGYADNG 357
+H + + D+ + N +I MYGKCG + +A +RVFD M +++ SW+ ++ GYA N
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGT 414
+ L L+ QM GL P+ T ++ AC ++ EE IH ++++ + P
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE--IHGFALRNGLAVDP-- 345
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIE 438
++G L+ + CG F AQ +
Sbjct: 346 --FIGISLLSLYICCGKPFAAQVLFD 369
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 221/405 (54%), Gaps = 38/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK KEAI L K GVK + + C + + ++H+Y +
Sbjct: 199 IAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGF 258
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++ ++N +I+MY KCG + +A +VF+ M +R++ SW MI G A +G +E L+LF
Sbjct: 259 KRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSD 318
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M ++G++PN TF+ + AC I E F SM ++GI P EHY +V +L + G
Sbjct: 319 MSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAG 378
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA +FI +P +P W AL R+H ++++ + A + +++LDP
Sbjct: 379 LLHEAHEFI-LNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLS 437
Query: 479 ----------SKADPKKIPTPPPKKRT----AISILDGKSRLVEF-RNPTLYRDDEKL-- 521
A +K K+T +I++ DG EF + D E++
Sbjct: 438 NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV-DGVVH--EFVAGEESHPDTEQIFQ 494
Query: 522 ---KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+ L +M+ YVP+T VL DI++ K + + HSE+LA+ +GL++TPA TP+RI+K
Sbjct: 495 RWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMK 554
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLR+C DCH+A K++S IV RE++VRD RFH F D CSC DYW
Sbjct: 555 NLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW MI GY G E + LF +M + G++ NE T +AV +AC A++ +
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG-MRIHEY 252
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+ G L+ + KCG L EA + E+ E T W A+ +HG
Sbjct: 253 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME--ERTVVSWSAMIGGLAMHGR-- 308
Query: 465 LEDHAEELMVDLDPSKADPKKI 486
+ A L D+ +P +
Sbjct: 309 -AEEALRLFSDMSQVGIEPNGV 329
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 220/395 (55%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ KEA+E+ + + + ++ C N + + VH Y +++I+ D VL
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + VF+ M +R + +W+ MI G A +G ++ L+LF ++++ ++
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMK 392
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN T + V +AC A +++ F++M+ +G+ P EHY +V +LG+ G EA+
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAED 452
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
I +P +P A W AL RIHG+ DL + +++++L+P +
Sbjct: 453 LINS-MPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVG 511
Query: 482 ---DPKKI----PTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ-MK 528
D KI K +SI+D + EF+ +P + KLK + + ++
Sbjct: 512 RFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQ 571
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ + PDT VL DID+E KE A+ YHSE+LAIA+GLI+T + I+KNLRVC DCH+
Sbjct: 572 MAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHS 631
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K++S+I RE+IVRD R+HHFK+G CSC D+W
Sbjct: 632 ATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G++++A ++ G ++D C+ T+ + E AK + F Q ++ ++ N +I
Sbjct: 181 GRLEDARKMFYSG-ESDVVCWNTMIDGYLKCGVLEAAKGL---FAQMPVK-NIGSWNVMI 235
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
K G++ DAR++FD M++R SW M++GY G E L++F+QM++ +P
Sbjct: 236 NGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRF 295
Query: 380 TFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+V +AC + AI++ A++ S+K + + GT L+ + KCG L
Sbjct: 296 ILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVL--GT----ALLDMYAKCGRLDMGW 349
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ E+ E W A+ IHG + A EL L + P I
Sbjct: 350 EVFEEMKEREIFT--WNAMIGGLAIHGR---AEDALELFSKLQEGRMKPNGI 396
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 209/385 (54%), Gaps = 33/385 (8%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGS 327
+++G+ D + T + C + +++H + D+ L N ++ MYG+CGS
Sbjct: 424 IERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGS 483
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR FD M R SW+ M++ A +G ++ LF M + G FL + SA
Sbjct: 484 LRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSA 543
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A +E HF +M + G+ P TEHY +V +LG+ G L +A + Q +P P A
Sbjct: 544 CAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIV-QAMPVPPDA 602
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDL---------------------DPSKADPKKI 486
W AL RI+GD + A E +++L + + A K +
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIM 662
Query: 487 PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
+K +S ++ +S++ EF ++ +Y + E++ + ++ + Y T
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERV--MGAIERAGYRAVTGE 720
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+++E KEQ L +HSE+LAIA+G++STP + LR+IKNLRVC DCHNA K +S++ G
Sbjct: 721 VLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFG 780
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD +RFHHFKDG CSCGDYW
Sbjct: 781 REIVVRDVRRFHHFKDGACSCGDYW 805
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 111/217 (51%), Gaps = 5/217 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +G+ DA F ++ C + ++ + +H +++ + ++ + ++ MYG+CGS
Sbjct: 119 ILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178
Query: 328 MTDARRVFDHMADRSMDS--WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ DA +F H+ +R +D W+ MI + NG E L++F +M +LG+ P+ TF++VF
Sbjct: 179 LRDANALFGHL-ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVF 237
Query: 386 SACGSADAIEEAFIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC S+ ++ + + F + E G+ LV +CG + A++F +P
Sbjct: 238 KACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFF-AAMPER 296
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA 481
+ + +A+I + +E L+ + P+++
Sbjct: 297 NAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRS 333
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 206/385 (53%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+++ D ++ C ++VH + + + G+ N +I++Y KCG
Sbjct: 215 EMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCG 274
Query: 327 SMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ DAR++F M R++ SW +I G A NG G + LQLF M + L P E T + V
Sbjct: 275 GVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVL 334
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC +++ F +F+ MK+E+GI+P EH +V +LG+ G + EA +I +P EP
Sbjct: 335 YACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYI-TTMPLEP 393
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------K 484
A W L +H +++ + A +V+LDP + K
Sbjct: 394 NAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRK 453
Query: 485 KIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRY 538
+ T +K S+++ ++ + EF +P + E L + + ++ Y+P T
Sbjct: 454 TMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSN 513
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL DI+ E KE AL YHSERLAIA+ L+ + TP+RI+KNLRVCGDCH AIK++S++
Sbjct: 514 VLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLISKVYD 573
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFK G CSC DYW
Sbjct: 574 REIIVRDRSRFHHFKGGACSCKDYW 598
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + L + C + +H ++ + + + N ++ +YG CG A RVF
Sbjct: 121 DTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVF 180
Query: 336 DHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
D + +R++ SW+ ++NG+A NG +E L +F +M ++ P+ T ++V +AC
Sbjct: 181 DEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGV 240
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ ++ G+ L+ + KCG + +A++ + + T W +L
Sbjct: 241 LALGR-RVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGE-MGVGRTVVSWTSL 298
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 210/394 (53%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ E+ G+K D ++ C N E + H L S + + ++N
Sbjct: 359 CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGKCGS+ DA R+FD M+ SW ++ GYA G E + LFE+M GL+P
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKP 478
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+ V SAC A +E+ +F+SM+ + I P +HY ++ + + G EA++F
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKAD 482
I+Q +P P A W L + R+ G++++ A E +++ DP +K
Sbjct: 539 IKQ-MPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQ 597
Query: 483 PKKIP-------TPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
++ KK S + K+++ F +P R EKL+ LN +M E
Sbjct: 598 WTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAE 657
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y PD VLHD+ K + +HSE+LAIA+GLI P P+RI+KNLRVC DCHNA
Sbjct: 658 EGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNA 717
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I GR+++VRD RFH F DG CSCGD+W
Sbjct: 718 TKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G EA+++ + GV D F ++ CG E K++H Y ++ +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDN 312
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +++MY KC S+ A VF M R++ SW MI GY N +E ++ F +M+
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++P++ T +V S+C + ++EE F + G+ LV + GKCG +
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+A + ++ + F + + YA+ + D E+++V+
Sbjct: 432 DAHRLFDE-MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVN 474
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ N +I +C + DA+ +F M DR +W M+ G NGL E L +F +MR
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 372 LGLQPNEQTFLAVFSACGSADAIEE 396
G+ ++ TF ++ +ACG+ A EE
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEE 296
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 213/387 (55%), Gaps = 30/387 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I + +GV+ ++ +C + + K+VH ++ D+ + + ++ MY KC
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAV 384
G + ++ +FD + + W+ +I+GYA +GLG+E L++F +M G +PNE TF+A
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SAC A +EE +ESM+S FG+ P T HY +V +LG+ G EA + I+ + E
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS-MTVE 498
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------------- 483
P A W +L R H +D+ + + +++++P +
Sbjct: 499 PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELR 558
Query: 484 KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK---LKALNQM----KESTYVPDT 536
K + T +K S + ++++ F + E+ LK L+++ +E+ Y PD
Sbjct: 559 KLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDC 618
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
Y LHD+D+E K +L YHSERLA+AY L+ P+R++KNLRVC DCH AIKI+S++
Sbjct: 619 SYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKV 678
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD RFHHF++G+CSC DYW
Sbjct: 679 KEREIILRDANRFHHFRNGECSCKDYW 705
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 32/234 (13%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF-------LQSTI 308
LC+EG+V EA E+ D+ + + T+ G ++A+K+ D S +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSML 241
Query: 309 RG--------------------DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
G ++ N +I G+ G + ARRVFD M +R+ SW
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSE 407
+I + NG E L LF M+K G++P T +++ S C S ++ +H + ++ +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
F + L + + KCG L ++ + I + P + + + YA HG
Sbjct: 362 FDVDVYVASVLMTMYI--KCGELVKS-KLIFDRFPSKDIIMWNSIISGYAS-HG 411
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 246 LPPSVAD--LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
+PP A+ + L + GK+ EA +L D S + ++ +A+K+ D
Sbjct: 15 IPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM 74
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
I + N ++ Y K G + +AR+VFD M +R++ SW ++ GY NG D
Sbjct: 75 PDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAE 130
Query: 364 QLFEQM 369
LF +M
Sbjct: 131 SLFWKM 136
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 321 MYGKC--GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
++G C G + +AR +FD M++RS+ +W M+ GY N D+ ++F+ M
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 211/382 (55%), Gaps = 30/382 (7%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSM 328
MD G+ + S F +L + +++H L++ D ++N ++ MY +CG +
Sbjct: 444 MDMGISS--STFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYL 501
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
DA R F+ + DR++ SW MI+G A +G + L LF M G++PN+ T++AV SAC
Sbjct: 502 EDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSAC 561
Query: 389 GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ E +F SM+ + G+ P EHY +V +L + G + EA +FI + +P + A
Sbjct: 562 SHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINE-MPLKADAL 620
Query: 449 FWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP------------------ 490
W+ L R H +I++ + A + +++L+P P + +
Sbjct: 621 VWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMR 680
Query: 491 ---PKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLH 541
K T +S ++ ++ EFR +P KL L ++K YVPDT VLH
Sbjct: 681 DNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLH 740
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
D+ E KEQ LL HSE++A+A+GLI+T A P+RI KNLRVC DCH+AIK MS+ RE+
Sbjct: 741 DMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREI 800
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
I+RD+ RFH KDG+CSCG+YW
Sbjct: 801 ILRDSNRFHRMKDGECSCGEYW 822
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 308 IRGDL-----VLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDE 361
+RGDL V+ N ++ +Y +CG++ AR VFD M R + SW M + A NG E
Sbjct: 75 LRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERE 134
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG-- 419
L L +M + GL PN T AV AC + + + G+ GT+ +G
Sbjct: 135 SLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL-WGTDIAVGSA 193
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
L+ +L + G L A++ + + E T W L
Sbjct: 194 LIDMLARNGDLASARKVFDGLI--EKTVVVWTLL 225
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ + + +I+M + G + AR+VFD + ++++ W L+I+ Y +E +++F
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+ G +P+ T ++ SAC ++ + S+ G + GLV + K
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLG-LQLHSLALRMGFASDACVSCGLVDMYAK 301
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ ++ ++ G + D ++ C ++H L+ D ++
Sbjct: 234 CAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSC 293
Query: 317 KVIEMYGKCG---SMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQLFEQMRKL 372
+++MY K +M A +VF+ M + SW +I+GY +G+ + + + LF +M
Sbjct: 294 GLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNE 353
Query: 373 GLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGH 429
++PN T+ ++ AC + +D +H +KS + H +G LV + + G
Sbjct: 354 SIKPNHITYSSILKACANISDHDSGRQVHAHVIKS----NQAAAHTVGNALVSMYAESGC 409
Query: 430 LFEAQQFIEQ 439
+ EA++ Q
Sbjct: 410 MEEARRVFNQ 419
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 204/391 (52%), Gaps = 32/391 (8%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+A+E+ D+ GV+ + + C ++++ + QS I D L V+
Sbjct: 213 DALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVV 272
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG + +A VFD + R + +W+ MI G+A +G D+ L+LF QM G+ P++
Sbjct: 273 DMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDV 332
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
T L V +AC A + E + + S GI P EHY +V + G+ G L EA++ I++
Sbjct: 333 TLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDE 392
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------- 483
+P +P AL +IHGD+DL + ++DLDP +
Sbjct: 393 -MPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDE 451
Query: 484 -----KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK------LKALNQMKESTY 532
+ + K S+++ EFR L + + +++++ Y
Sbjct: 452 VGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGY 511
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
VPDT LHD+ +E KE ALL HSE+LAIA+GL+ R LRI KNLRVC DCH A K
Sbjct: 512 VPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKY 571
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+SR+ GRE++VRD RFHHFKDG CSC DYW
Sbjct: 572 VSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ + G + DAR VFD M R++ SW+ MI+GY + L++F++MR
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMR 222
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
LG++ N + AC A A+ + ++ GI + +V + KCG +
Sbjct: 223 ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQS-GIEVDAKLATAVVDMYCKCGCV 281
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
EA + LP W + +HG D A EL ++ + P +
Sbjct: 282 DEAWGVFDS-LPARGLTT-WNCMIGGFAVHGRC---DDALELFHQMEAAGVAPDDV 332
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 209/385 (54%), Gaps = 33/385 (8%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGS 327
+++G+ D + T + C + +++H + D+ L N ++ MYG+CGS
Sbjct: 424 IERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGS 483
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR FD M R SW+ M++ A +G ++ LF M + G FL + SA
Sbjct: 484 LRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSA 543
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A ++ HF +M + G+ P TEHY +V +LG+ G L +A + Q +P P A
Sbjct: 544 CAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIV-QAMPVPPDA 602
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDL---------------------DPSKADPKKI 486
W AL RI+GD + A E +++L D + A K +
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIM 662
Query: 487 PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
+K +S ++ +S++ EF ++ +Y + E++ + ++ + Y T
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERV--MGAIERAGYRAVTGE 720
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+++E KEQ L +HSE+LAIA+G++STP + LR+IKNLRVC DCHNA K +S++ G
Sbjct: 721 VLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFG 780
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD +RFHHFKDG CSCGDYW
Sbjct: 781 REIVVRDVRRFHHFKDGACSCGDYW 805
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +G+ DA F ++ C + ++ + +H +++ + ++ + ++ MYG+CGS
Sbjct: 119 ILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178
Query: 328 MTDARRVFDHMADRSMDS--WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ DA +F H+ +R +D W+ MI + NG E L++F +M +LG+ P+ TF++VF
Sbjct: 179 LRDANALFGHL-ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVF 237
Query: 386 SACGSADAIEEAFIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC S+ ++ + + F + E G+ LV +CG + A++F + +P E
Sbjct: 238 KACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAE-MP-E 295
Query: 445 PTAEFWEAL 453
A W ++
Sbjct: 296 RNAVSWTSM 304
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGN-PKWYEN-AKKVHDYFLQSTIRGD 311
Q G +EA+E ++ G+ D F ++F+ C + P + K H ++ + D
Sbjct: 207 QNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSD 266
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ ++ Y +CG + AR+ F M +R+ SW MI + G ++ F M
Sbjct: 267 VVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIG-HLLAVETFHAMLL 325
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G+ P T A C + + A + E++ E G+ LV +C
Sbjct: 326 EGVVPTRSTLFAALEGC---EDLRVARL-VEAIAQEIGVVTDVAIVTDLVMAYARC 377
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 216/405 (53%), Gaps = 37/405 (9%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G +A E+ +KA TL C + +HD ++
Sbjct: 265 IAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG 324
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
++++ +I+MY KCG AR FD M ++++ SW MI GY +G E L +F
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFY 384
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM G++PN TF++V +AC A +EE + F +M E+ + PG EHY +V +LG+
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRA 444
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------- 480
G++ EA I + + W +L RIH D++L + + + LDPS
Sbjct: 445 GYIKEAYNLI-KSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLL 503
Query: 481 ----ADPKKIPTPP-----PKKRTAI-----SILDGKSRLVEF--------RNPTLYRDD 518
AD + K R + S+++ K R+ F ++ +Y+
Sbjct: 504 ANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYL 563
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
E+L +++E+ YVP+ VLHD+D+E KE + HSE+LA+A+G++++ + + +IK
Sbjct: 564 EELSV--KLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIK 621
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH IK++S+IV RE+IVRD KRFHHFKDG CSCGDYW
Sbjct: 622 NLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G D+ ++ C ++ VH ++ + + + N +++ Y KCG ++ +
Sbjct: 187 GTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLS 246
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGS 390
R+VFD MA++ + SW+ MI YA NGL + ++F M K G + NE T + AC
Sbjct: 247 RKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAH 306
Query: 391 ADAI 394
A+
Sbjct: 307 EGAL 310
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A+LAR + A M K +K + S F + C + K+ H L
Sbjct: 54 IAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGF 113
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL +++ +I+MY KCG +++AR +FD + R++ +W +I GY N E L +F++
Sbjct: 114 ESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKE 173
Query: 369 M---------RKLGLQPNEQTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHY 417
++G + ++V SAC S A+ E +H ++K G E+
Sbjct: 174 FLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG-VHGVAIKVGLDKVMGVEN- 231
Query: 418 LGLVGVLGKCGHL 430
L+ KCG +
Sbjct: 232 -TLLDAYAKCGEV 243
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 329 TDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
T+ +F+ DR+ + SW+ +I A G E L+ F MRKL ++PN TF +
Sbjct: 32 TNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKS 91
Query: 388 CGSA-------DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
C + A ++A + +S+ +S L+ + KCG L A+ ++
Sbjct: 92 CSALFDLNSGKQAHQQALVF--GFESDLFVSS------ALIDMYSKCGKLSNARVLFDE- 142
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD----LDPSKADPKKIPTPPPKKRTA 496
+P W +L I G + +D E LMV + S+ + +++ T
Sbjct: 143 IPRRNIVT-WTSL-----ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV-AM 195
Query: 497 ISILDGKSRL 506
IS+L SR+
Sbjct: 196 ISVLSACSRV 205
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 211/385 (54%), Gaps = 30/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I MD G+ + S F +L + +++H L++ D ++N ++ MY +C
Sbjct: 441 IVRMDVGISS--STFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC 498
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + DA R F+ + DR++ SW MI+G A +G + L LF M G++PN+ T++AV
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC + E +F SM+ + G+ P EHY +V +L + G + EA +FI + +P +
Sbjct: 559 SACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINE-MPLKA 617
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP--------------- 490
A W+ L R H +I++ + + +V+L+P P + +
Sbjct: 618 DALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRS 677
Query: 491 ------PKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
K T +S ++ ++ EFR +P KL L Q+K YVPDT
Sbjct: 678 AMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSI 737
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+ E KEQ LL HSE++A+A+GLI+T A P+RI KNLRVC DCH+AIK MS+
Sbjct: 738 VLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATR 797
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD+ RFH KDG+CSCG+YW
Sbjct: 798 REIILRDSNRFHRMKDGECSCGEYW 822
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 308 IRGDL-----VLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDE 361
+RGDL V+ N ++ +Y +CG++ AR VFD M R + SW M + A NG
Sbjct: 75 LRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERG 134
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG-- 419
L L +M + GL PN T A AC + + + G+ GT+ +G
Sbjct: 135 SLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL-WGTDVAVGSA 193
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
L+ +L + G L A++ + + E T W L
Sbjct: 194 LIDMLARNGDLASARKVFDGLI--EKTVVVWTLL 225
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ + + +I+M + G + AR+VFD + ++++ W L+I+ Y +E ++LF
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK--CG 428
+ G +P+ T ++ SAC ++ + S+ G++ GLV + K G
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLG-LQLHSLALRMGLASDACVSCGLVDMYAKSNIG 305
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
+ + +++P W AL
Sbjct: 306 QAMDYANKVFERMPKNDVIS-WTAL 329
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ ++ ++ G + D ++ C ++H L+ + D ++
Sbjct: 234 CAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSC 293
Query: 317 KVIEMYGKCG---SMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQLFEQMRKL 372
+++MY K +M A +VF+ M + SW +I+GY +G+ + + + LF +M
Sbjct: 294 GLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNE 353
Query: 373 GLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGH 429
++PN T+ ++ +C S +D +H +KS + + H +G LV + + G
Sbjct: 354 SIKPNHITYSSILKSCASISDHDSGRQVHAHVIKS----NQASAHTVGNALVSMYAESGC 409
Query: 430 LFEAQQFIEQ 439
+ EA++ Q
Sbjct: 410 MEEARRVFNQ 419
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 217/400 (54%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELMD-----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EAI + + +G+K F ++ + ++H +++ + D+
Sbjct: 348 QNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDV 407
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I++Y KCG + +A +F+HM RS W+ +I G +G G + L LF QM++
Sbjct: 408 YVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQE 467
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++P+ TF+++ +AC A +++ F+ M++ +GI P +HY +V +LG+ G L E
Sbjct: 468 EIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDE 527
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
A +FI Q +P +P + W AL RIHG++++ A + + +LDP + +
Sbjct: 528 AFEFI-QSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYA 586
Query: 493 KRTAISILDGKSRLVEFRN----------------PTLYRDD--------EKLK-----A 523
K +D LV +N Y E+++
Sbjct: 587 KIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDL 646
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L +MK + YVPD +VL D++++ KEQ L HSERLAIA+G+I+TP TPL I KNLRVC
Sbjct: 647 LAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVC 706
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH+A K +S+I RE+IVRD RFHHFKDG CSCGD+W
Sbjct: 707 GDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-RGDL 312
Q GKV A+EL M+ GV D +L AK VH Y + GD+
Sbjct: 246 QGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDI 305
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK- 371
+ N +++MY K + A++VFD++ DR + SW+ +I GY NGL +E ++++ M
Sbjct: 306 IAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNH 365
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
GL+P + TF++V A +++ +H S+K+ G++ L+ + KCG L
Sbjct: 366 EGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKT--GLNLDVYVTTCLIDLYAKCGKL 423
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
EA F+ + +P T W A+ +HG
Sbjct: 424 VEA-MFLFEHMPRRSTGP-WNAIIAGLGVHG 452
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHD 301
+P A L+ LC+ + +A+ L+ + GV DA ++ +C A +H
Sbjct: 133 VPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHV 192
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
Y ++ + G+L + N +I++YGK G +T+A VF MA R + +W+ +I+ G
Sbjct: 193 YAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAA 252
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSA---CG 389
++LF M + G+ P+ T +++ SA CG
Sbjct: 253 AVELFHGMMESGVCPDVLTLVSLASAVAQCG 283
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+ ++ Y + G + +A RVFD M +R + +W+ M++G N + + L +M G+
Sbjct: 105 SGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGV 164
Query: 375 QPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ T +V C D +H ++K G+S L+ V GK G L EA
Sbjct: 165 AGDAVTLSSVLPMCVVLGDRALALVMHVYAVKH--GLSGELFVCNALIDVYGKLGMLTEA 222
Query: 434 Q 434
Sbjct: 223 H 223
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 209/355 (58%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + L++ + D+ +++ +I+MY K G + ++R+FD + ++ + SW+++I GY
Sbjct: 528 GKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGI 587
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G E L+LFE+M +LGL+P++ TF + AC A +E+ +F M + I P E
Sbjct: 588 HGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE 647
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G + +A + IE+ +P +P + W +L + RIHG++ L + +++
Sbjct: 648 HYTCVVDMLGRAGRIDDALRLIEE-MPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLE 706
Query: 476 LDPSKADPKKIPT---PPPKKRTAISILDGKSRLVEFRNPT-------------LYRDDE 519
L+P K + + + K + + G+ + + + DE
Sbjct: 707 LEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDE 766
Query: 520 KLKALNQMKES-----------TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
L L +++E+ Y PDT VLHD+++E K L HSE+LAI++GL++T
Sbjct: 767 MLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNT 826
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R+ KNLR+CGDCHNA K +S++V R+++VRDNKRFHHF+DG CSCGDYW
Sbjct: 827 AKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ D G+ D +L C K +++H + L++ + D + ++ +Y C
Sbjct: 397 LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICC 456
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G A+ +FD M RS+ SW++MI GY+ NGL DE + LF QM G+QP E + V
Sbjct: 457 GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVC 516
Query: 386 SACGSADAI 394
AC A+
Sbjct: 517 GACSQLSAL 525
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
L + CG K E +++H+ ST D VLN ++I MY CGS +D+R VFD +
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL-QPNEQTFLAVFSAC-GSADAIEEAF 398
+++ W+ +++ Y N L ++ + +F ++ + +P+ T V AC G D
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
IH + K + ++ ++G L+ + GKCG + EA + E
Sbjct: 123 IHGMATKMDL----VSDVFVGNALIAMYGKCGLVEEAVKVFEH 161
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + D+ + N +I MYGKCG + +A +VF+HM +R++ SW+ +I G+++NG
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 359 GDEGLQLFEQMR--KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
E F +M + P+ T + V C + IE+ + + + G++
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKG-MAVHGLAVKLGLNEELMV 241
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQ 439
L+ + KC L EAQ ++
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDK 264
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
+C+ + + ++ D +KAD + +C ++ K++H Y + ++ + ++
Sbjct: 286 VCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVA 345
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N I Y +CG++ + RVFD M +++ SW+ ++ GYA N + L L+ QM GL
Sbjct: 346 NAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLD 405
Query: 376 PNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
P+ T ++ AC ++ EE IH ++++ + P ++G L+ + CG
Sbjct: 406 PDWFTIGSLLLACSRMKSLHYGEE--IHGFALRNGLAVDP----FIGISLLSLYICCGKP 459
Query: 431 FEAQQFIE 438
F AQ +
Sbjct: 460 FAAQVLFD 467
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + T+ +C + E VH ++ + +L++NN +I+MY KC +++A+ +F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSAC 388
D +++ SW+ MI GYA L ++M+ ++ +E T L V C
Sbjct: 263 DKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 214/405 (52%), Gaps = 34/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A G+ +EA+ L D+ A A+ + C E K VH
Sbjct: 304 AMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSR 363
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+R + L +I+MY KCG++ A VFD M +R++ +W ++G A NG+G + L LF
Sbjct: 364 GMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALF 423
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M G++PN TF+ V C A ++E F+SMKS GI P EHY +V + G+
Sbjct: 424 KRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGR 483
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L +A FI +P EP W AL N +RIH +++L +A + ++ ++ SK D +
Sbjct: 484 AGRLDDAVNFI-NGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE-SKNDAAHV 541
Query: 487 ----------------------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDE 519
KK S ++ ++ EF +P +
Sbjct: 542 LLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEM 601
Query: 520 KLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
L +NQ ++ Y+ +T+ VL DI++E KE A+ HSE+LAIA+GL++ P +RI+K
Sbjct: 602 MLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVK 661
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH+ K++S++ RE+++RD RFHHFKDG CSC DYW
Sbjct: 662 NLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ G AR +FD M R +W+ MI GY G E L+LF++MR
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKC 427
G E T ++ +AC A+E ++H S ++ GT L+ + KC
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGT----ALIDMYSKC 382
Query: 428 GHLFEAQQFIEQ 439
G + A + +
Sbjct: 383 GAVAAAMEVFDS 394
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 210/371 (56%), Gaps = 30/371 (8%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E + +H + +++ + ++ + + +++MYGKCG + D+ + FD M ++
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
++ + + +I GYA G D L LFE M R G PN TF+++ SAC A A+E
Sbjct: 375 NLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMK 434
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
F+SMKS +GI PG EHY +V +LG+ G + +A +FI +K+P +PT W AL+N R+
Sbjct: 435 IFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFI-KKMPIKPTISVWGALQNACRM 493
Query: 460 HGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAIS 498
HG L A E + LDP + +++ KK S
Sbjct: 494 HGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYS 553
Query: 499 ILDGKSRLVEF----RNPTLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+ K+++ F R+ + ++ + + K N+M+ + Y PD + L+D+++E K +
Sbjct: 554 WITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEV 613
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
+HSE+LA+A+GL++ P P+RI KNLR+CGDCH+ K +S V RE+IVRDN RFH F
Sbjct: 614 SHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRF 673
Query: 613 KDGKCSCGDYW 623
KDG CSC DYW
Sbjct: 674 KDGICSCKDYW 684
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Query: 264 EAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
E E+ +GV + F +F+ + + K++H ++ D+ + +MY
Sbjct: 95 EFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYC 154
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K DAR++FD + +R++++W+ I+ +G E ++ F + R++G QPN TF
Sbjct: 155 KTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCG 214
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
+AC ++ + + G Y GL+ GKC + + + I ++
Sbjct: 215 FLNACSDGLLLDLG-MQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQI-RSSEIIFAEMGM 272
Query: 444 EPTAEFWEALRNYARIHGD 462
+ + + Y + H D
Sbjct: 273 KNAVSWCSLVAAYVQNHED 291
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 259 EGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+G+ KEAIE + G + ++ F C + + ++H +S D+ +
Sbjct: 187 DGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSV 246
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I+ YGKC + + +F M ++ SW ++ Y N ++ L+ + RK +
Sbjct: 247 YNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIV 306
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLF 431
+ ++ +V SAC +E IH ++K+ E I G+ LV + GKCG +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGS----ALVDMYGKCGCIE 362
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
+++Q ++ +P + + YA G +D+ A L D+ P P P
Sbjct: 363 DSEQAFDE-MPEKNLVTLNSLIGGYAH-QGQVDM---ALALFEDMAPRGCG------PAP 411
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTY 532
T +S+L SR N +K + MK STY
Sbjct: 412 NYMTFVSLLSACSRAGAVEN--------GMKIFDSMK-STY 443
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I MY K AR V R++ SW +++G A NG L F +MR+ G
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREG 103
Query: 374 LQPNEQTFLAVFSACGS 390
+ PN+ TF VF A S
Sbjct: 104 VAPNDFTFPCVFKAVAS 120
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 214/405 (52%), Gaps = 34/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A G+ +EA+ L D+ A A+ + C E K VH
Sbjct: 304 AMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSR 363
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+R + L +I+MY KCG++ A VFD M +R++ +W ++G A NG+G + L LF
Sbjct: 364 GMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALF 423
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M G++PN TF+ V C A ++E F+SMKS GI P EHY +V + G+
Sbjct: 424 KRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGR 483
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L +A FI +P EP W AL N +RIH +++L +A + ++ ++ SK D +
Sbjct: 484 AGRLDDAVNFI-NGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE-SKNDAAHV 541
Query: 487 ----------------------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDE 519
KK S ++ ++ EF +P +
Sbjct: 542 LLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEM 601
Query: 520 KLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
L +NQ ++ Y+ +T+ VL DI++E KE A+ HSE+LAIA+GL++ P +RI+K
Sbjct: 602 MLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVK 661
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH+ K++S++ RE+++RD RFHHFKDG CSC DYW
Sbjct: 662 NLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ G AR +FD M R +W+ MI GY G E L+LF++MR
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKC 427
G E T ++ +AC A+E ++H S ++ GT L+ + KC
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGT----ALIDMYSKC 382
Query: 428 GHLFEAQQFIEQ 439
G + A + +
Sbjct: 383 GAVAAAMEVFDS 394
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 214/405 (52%), Gaps = 34/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A G+ +EA+ L D+ A A+ + C E K VH
Sbjct: 297 AMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSR 356
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+R + L +I+MY KCG++ A VFD M +R++ +W ++G A NG+G + L LF
Sbjct: 357 GMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALF 416
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M G++PN TF+ V C A ++E F+SMKS GI P EHY +V + G+
Sbjct: 417 KRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGR 476
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L +A FI +P EP W AL N +RIH +++L +A + ++ ++ SK D +
Sbjct: 477 AGRLDDAVNFI-NGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIE-SKNDAAHV 534
Query: 487 ----------------------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDE 519
KK S ++ ++ EF +P +
Sbjct: 535 LLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEM 594
Query: 520 KLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
L +NQ ++ Y+ +T+ VL DI++E KE A+ HSE+LAIA+GL++ P +RI+K
Sbjct: 595 MLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVK 654
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH+ K++S++ RE+++RD RFHHFKDG CSC DYW
Sbjct: 655 NLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 699
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ G AR +FD M R +W+ MI GY G E L+LF++MR
Sbjct: 260 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 319
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKC 427
G E T ++ +AC A+E ++H S ++ GT L+ + KC
Sbjct: 320 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGT----ALIDMYSKC 375
Query: 428 GHLFEAQQFIEQ 439
G + A + +
Sbjct: 376 GAVAAAMEVFDS 387
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 222/398 (55%), Gaps = 34/398 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q GK EAI+L D+ V+ + ++ C + + + VH+Y +S + ++
Sbjct: 119 QCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVH 178
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + +ARRVF M +R++ SW MI G A +G +E L LF +M KLG
Sbjct: 179 VCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG 238
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TF+ + AC I+E F SM +++G+ P EHY +V + + G L EA
Sbjct: 239 VKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEA 298
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SK 480
+FI +P +P W AL ++H +IDL + A + + +LDP ++
Sbjct: 299 HEFI-LSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAE 357
Query: 481 AD--------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL--KALN 525
A+ K + KK + S + + EF +P D K+ K L
Sbjct: 358 AERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQ-AEDICKIWDKLLV 416
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+MK Y P T VL D++++ KE+ L HSE+LA+ +GL++TP TP+RI+KNLRVC D
Sbjct: 417 KMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCED 476
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH A+KI+S IV RE+IVRD RFH F+DG+CSC D+W
Sbjct: 477 CHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 38/200 (19%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL------ 348
N K +H F + +L L N ++ +YG CG M DA +F+ M R +W++
Sbjct: 28 NGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLA 87
Query: 349 -------------------------MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
MI+G+ G +E + LF ++ ++PNE T ++
Sbjct: 88 KRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVS 147
Query: 384 VFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ-FIEQKL 441
V +AC ++ +H S KS G L+ + KCG L A++ F E +
Sbjct: 148 VLAACADLGDLDLGRIVHEYSTKS--GFKRNVHVCNTLIDMYVKCGCLENARRVFYEME- 204
Query: 442 PFEPTAEFWEALRNYARIHG 461
E T W A+ +HG
Sbjct: 205 --ERTVVSWSAMIAGLAMHG 222
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 211/391 (53%), Gaps = 32/391 (8%)
Query: 264 EAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+AIEL +GV A+ + ++ C + E ++ HDY L++ + +L+L ++
Sbjct: 228 KAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALV 287
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +CGS+ A VFD + R SW +I G+A +G ++ L+ F +M K GL P E
Sbjct: 288 DMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREI 347
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
TF AV SAC +E FESMK ++ I P EHY +V +LG+ G L EA++F+ +
Sbjct: 348 TFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNE 407
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISI 499
+P +P A W AL RIH + ++ + A + +++L P + + + +
Sbjct: 408 -MPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWEN 466
Query: 500 LDGKSRLVEFRNP------TLYRDDEKL---------------------KALNQMKESTY 532
++ ++++ R TL+ D K+ + L +++ + Y
Sbjct: 467 VENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGY 526
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
+ L DID+E KE + HSE+LAIAY ++ T P+RI+KNLRVC DCH A K+
Sbjct: 527 TGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKL 586
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S++ RELIVRD RFHHFK G CSC DYW
Sbjct: 587 ISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ Y K G +T AR++FD M ++++ +W +MI+GYA N D+ ++L+ ++
Sbjct: 178 DVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQ 237
Query: 371 KLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G+ NE ++V ++C A+ E A + K + GT LV + +C
Sbjct: 238 SEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGT----ALVDMYARC 293
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G + +A +Q LP + + +A +HG + A E ++ + P++I
Sbjct: 294 GSIDKAIWVFDQ-LPGRDALSWTTLIAGFA-MHG---YAEKALEYFSRMEKAGLTPREI 347
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 208/385 (54%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL + +K ++ C + K +H+Y ++ + ++ +I+MY KCG
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCG 271
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF++MA R +W MI YA +G G + + LF++MRK G +P+E TFL +
Sbjct: 272 SLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLY 331
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE F +F M+ ++G+ PG +HY +V +LG+ G L EA +FI LP PT
Sbjct: 332 ACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFI-VGLPIRPT 390
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKK------------- 493
W L + HG+++L E + +LD S I + +
Sbjct: 391 PILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKL 450
Query: 494 ---RTAISILDGKSRLVE------FRNPTLYRDDEKL-----KALNQMKESTYVPDTRYV 539
R + I S V F ++ KL + + ++K YVP+T V
Sbjct: 451 MNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLV 510
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
H D++ E KE L YHSE+LAI +GL++TP T +R++KNLRVCGDCH+A K++S I
Sbjct: 511 FHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFD 570
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++I+RD +RFHHFKDGKCSC DYW
Sbjct: 571 RQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ G+ D F +L + C + K E +++H ++ + ++ + +I MY C
Sbjct: 111 QILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACN 170
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M ARRVFD + + + +++ MI GYA +E L LF +++ L+P + T L+V S
Sbjct: 171 EMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLS 230
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
+C A++ E +K G + + L+ + KCG L +A E +
Sbjct: 231 SCALLGALDLGKWMHEYVKKN-GFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQ 289
Query: 447 AEFWEALRNYARIHG 461
A W A+ IHG
Sbjct: 290 A--WSAMIMAYAIHG 302
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYG---KCGSMTDARRVFDHMADRSMDSWHLMINGY 353
K++ + +++ + DL + K I SM A +FD + + ++ M GY
Sbjct: 37 KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A LF Q+ GL P++ TF ++ AC S A+EE + + G+S
Sbjct: 97 ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR-QLHCLAIKLGLSEN 155
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA-LRNYAR 458
L+ + C + A++ ++ +EP + A + YAR
Sbjct: 156 VYVCPTLINMYTACNEMDCARRVFDK--IWEPCVVTYNAMITGYAR 199
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 218/385 (56%), Gaps = 33/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ + VK + ++ C + E K VH ++ + + N +++MY K GS
Sbjct: 210 MLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGS 269
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DA++VFD +A R + SW+ M+ GY+ +GLG LQ FE+M + + PN+ TFL V +A
Sbjct: 270 IEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A ++E +F+ MK ++ + P HY+ +V +LG+ GHL A QFI + +P +PTA
Sbjct: 330 CSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISE-MPIKPTA 387
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------SKADPKKI 486
W AL R+H +++L +A E + +LD + K +
Sbjct: 388 AVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMM 447
Query: 487 PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
KK A S ++ ++ + F + ++ E++ +++KE YVPD+ +
Sbjct: 448 KESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQIS--DKIKEIGYVPDSSH 505
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL +DQ+ +E L YHSE+LA+A+ L++TP + +RI KN+R+CGDCH+A K +S++V
Sbjct: 506 VLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVE 565
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHF DG CSC DYW
Sbjct: 566 REIIVRDTNRFHHFCDGACSCEDYW 590
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+TL + C + K +H L S R DLV+ N ++ +Y KCG + AR++FD M+
Sbjct: 19 HTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS 78
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF---SACGSADAIEEA 397
R + +W +I GY+ + + L L +M ++GL+PN+ T ++ S GS D ++
Sbjct: 79 RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNY 456
+H ++ +G ++ + +C HL EAQ + + + W AL Y
Sbjct: 139 QLHGLCLR--YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS--WNALIAGY 194
Query: 457 AR 458
AR
Sbjct: 195 AR 196
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H L+ ++ ++ +++MY +C + +A+ +FD M ++ SW+ +I GYA
Sbjct: 137 GRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR 196
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMK 405
G GD+ LF M + ++P T+ +V AC S ++E+ ++H +K
Sbjct: 197 KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK 247
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 214/402 (53%), Gaps = 39/402 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFEL------CGNPKWYENAKKVHDYFLQSTIRGD 311
Q G+ +A++L + K S F L C +++H Y L++ +
Sbjct: 457 QHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESE 516
Query: 312 -LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L + N +I+MY K G + AR VFD+M R++ SW ++ GY +G G+E L LF+QM+
Sbjct: 517 VLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQ 576
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
KLG + TFL V AC + +++ I+F M FGI+PG EHY +V +LG+ G L
Sbjct: 577 KLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRL 636
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---------- 480
EA + I + + EPTA W AL + +RIH +I+L ++A + +L
Sbjct: 637 NEAMELI-KNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNL 695
Query: 481 -------ADPKKIPT----PPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKL 521
D +I + +KR S + GK F + +Y + L
Sbjct: 696 YANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIY--NLLL 753
Query: 522 KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+ ++K+ YVP T + LHD+D E K L HSE+LA+AYG+++T P+RI KNLR
Sbjct: 754 DLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLR 813
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH+A+ +S I+ E+++RD+ RFHHFK G CSC YW
Sbjct: 814 ICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 243 DQVLPPSVAD-------LARLCQEGKVKEAIELMDK-------GVKADASCFYTLFELCG 288
D+VL + D LA Q G+ + A+ + + ++ DA + C
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
+ ++ K+VH + +++ + D+ + N ++ MY KC M +A +VF+ + + + SW+
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
M+ GY+ G D L LF+ M++ ++ + T+ AV + EA F M+ +
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQ-LY 364
Query: 409 GISPGTEHYLGLVGVLGKCGHLFEAQQ 435
G+ P L+ G L +Q
Sbjct: 365 GLEPNVVTLASLLSGCASVGALLYGKQ 391
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q+G EA+++ + G++ + +L C + K+ H Y +++
Sbjct: 340 AVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKN 399
Query: 307 TI-------RGDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNG 357
+ DL++ N +I+MY KC S AR +FD + D+++ +W +MI GYA +G
Sbjct: 400 ILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHG 459
Query: 358 LGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACG 389
++ L+LF Q+ +K L+PN T AC
Sbjct: 460 EANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F + + CG + VH + + ++ + N ++ MYG+CG++ DA ++F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 336 DHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQM---RKLGLQPNEQTFLAVFSACG 389
D + +R ++ SW+ ++ Y G L++ +M L L+P+ T + + AC
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 390 SADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
S A++ +H S+++ G+ LV + KC + EA + E
Sbjct: 246 SVFALQHGKQVHGFSVRN--GLVDDVFVGNALVSMYAKCSKMNEANKVFE 293
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM--AD 340
L L K NAK H Q + G + + + Y +CG+ +A + + +
Sbjct: 33 LISLLRQCKTLINAKLAHQ---QIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPSH 89
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-AFI 399
++ W+ +I GL D+ L + QM++LG P+ TF V ACG ++ A +
Sbjct: 90 STVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASV 149
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
H ++ G+ +V + G+CG L +A Q ++ L
Sbjct: 150 H--AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVL 189
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 212/386 (54%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+K + ++ C E + +H+Y + + + +N +I+MYGKCG
Sbjct: 233 EMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCG 292
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M R +W +MI YA++ G E + LFE+M+K G++P++ TFL V
Sbjct: 293 SLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLY 352
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + E +F+SM+ EFG+ PG +HY + +L + G L A +FI++ LP +PT
Sbjct: 353 ACSHSGLVSEGLQYFDSMR-EFGLVPGIKHYGCVADLLARSGQLDRAYEFIDE-LPIKPT 410
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W L + GD DL E +++LD S K
Sbjct: 411 AILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKL 470
Query: 486 IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL--KALNQMKESTYVPDTRY 538
+ K S ++ +R+ EF R+P D ++ + Q+K + YVP+T +
Sbjct: 471 MNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSL-DARRMVDGVIEQLKLAGYVPNTSH 529
Query: 539 VLH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
V H ++ +E K +L YHSE+LAI++GL++T T LR++KNLRVC DCH+ K++S +
Sbjct: 530 VFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVF 589
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD RFHHF+DG CSCGDYW
Sbjct: 590 NRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 212 ARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK 271
AR + ++ PG N + +C A PP+ E + + ++++
Sbjct: 87 ARQVFDRI-PGPGDVVWYNTLLRGYARCSAAGGARPPA---------EEAARVFVRMLEE 136
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV D F +L + C + E ++ H ++ + +I MY +CG A
Sbjct: 137 GVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAA 196
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R +F + + S++ MI + E L LF +M+ GL+ T ++V SAC
Sbjct: 197 RTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALL 256
Query: 392 DAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
A+E +IH K + + + L+ + GKCG L +A
Sbjct: 257 GALELGRWIHEYVRKVQ--LDSLVKVNTALIDMYGKCGSLEDA 297
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 222/413 (53%), Gaps = 36/413 (8%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
+QV SV + L Q G+ + A+ +++ + ++ ++ C + E K+
Sbjct: 343 NQVTWTSV--IVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ 400
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++ + D + +I+ YGKCGS AR VF+ + + + S + MI YA NG
Sbjct: 401 IHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGF 460
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
G E LQLF M+ GL+PN T+L V SAC +A +EE F S ++ I +HY
Sbjct: 461 GHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYA 520
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+V +LG+ G L EA+ I Q + W L + RIHGD+++ ++DL P
Sbjct: 521 CMVDLLGRAGRLKEAEMLINQVNISDVV--IWRTLLSACRIHGDVEMAKRVMNRVIDLAP 578
Query: 479 SKADPKKIPTPPPKKRTAIS-ILDGKSRLVEFR---NPTL-------------------- 514
+ + S +++ KS + E R NP +
Sbjct: 579 EDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHP 638
Query: 515 -YRD-DEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STPA 570
+RD EKL+ L ++KE YVPDTR+VL D+D+E K ++L YHSE+LA+A+ L S
Sbjct: 639 NFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYK 698
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T +RI+KNLRVCGDCH +K +S+IVGR++I RD KRFHHF++G CSCGDYW
Sbjct: 699 NTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ KG++A+ ++ CGN + + + +H +++ + + ++ MY +CG
Sbjct: 269 MTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGL 328
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ D+ +VF + + +W +I G NG + L F QM + + PN T +V A
Sbjct: 329 VDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRA 388
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
C S +E+ IH MK FG+ + Y+G L+ GKCG
Sbjct: 389 CSSLAMLEQGKQIHAIVMK--FGLD--IDKYVGAALIDFYGKCG 428
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A + G+ KEAI++ + G+ D F ++F+ + ++ H QS +
Sbjct: 148 IASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG---QSVV 204
Query: 309 RG----DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
G ++ + + +++MY K G M DAR V D + + + + +I GY+ +G E LQ
Sbjct: 205 LGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQ 264
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGV 423
+F M K G++ NE T +V CG+ + + IH +K+ G+ L+ +
Sbjct: 265 VFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA--GLESAVASQTSLLTM 322
Query: 424 LGKCGHLFEAQQFIEQ 439
+CG + ++ + +Q
Sbjct: 323 YYRCGLVDDSLKVFKQ 338
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L + C K + K+ + L+ L NK+I+ Y KCGS+ AR+VFD +
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
R + +W+ MI Y NG E + ++++M G+ P+E TF +VF A + E
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
H +S+ G+S ++G LV + K G + +A+ +Q
Sbjct: 198 AHGQSVVLGVGVS---NVFVGSALVDMYAKFGKMRDARLVSDQ 237
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 215/408 (52%), Gaps = 38/408 (9%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +A+ E+ G+K D+ + CG+ E ++++++ +
Sbjct: 206 ALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREE 265
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I +++++N ++M KCG M A +FD M R++ SW +I GYA NG ++ L LF
Sbjct: 266 GIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALF 325
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM--KSEFGISPGTEHYLGLVGVL 424
+M+ G+QPN TFLAV SAC + E + +F M + I P EHY +V +L
Sbjct: 326 SRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLL 385
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ GHL EA FI + +P E W AL IH +I L H +L+ +L P A
Sbjct: 386 GRSGHLEEAYNFI-KIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYH 444
Query: 485 KIPT----------------PPPKKRTAISILDGKSRLVEFRNP--TLYRDDE------- 519
+ + KK+ A + S VEF LY D+
Sbjct: 445 VLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSS--VEFNGEIHILYGGDKSHPQSAS 502
Query: 520 ---KLK-ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
KL+ L QMK Y+P+T V HD++ E KE L HSE+LAIA+ LI+ + P+R
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIR 562
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLR+CGDCH K++SRI RE+I+RD RFHHFK+G CSC D+W
Sbjct: 563 VMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G M+ AR++FD M W+ ++ GY NG+ D+ + ++ +MR LG++P+ TF V
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 386 SACG 389
AC
Sbjct: 143 KACA 146
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 232/440 (52%), Gaps = 51/440 (11%)
Query: 219 VSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLC---QEGKVKEAIE----LMDK 271
++P QI N L + P VA A + Q G +AIE ++ +
Sbjct: 324 ITPARQIFNSLKD---------------PDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSE 368
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G + ++ + + + K++H ++S + N + MY K GS+ A
Sbjct: 369 GPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGA 428
Query: 332 RRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
R+VF+ + +R SW MI A +GLG+E ++LFEQM LG++P+ T++ V SAC
Sbjct: 429 RKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTH 488
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+E+ +F+ MK+ I P HY +V + G+ G L EA +F+E +P EP W
Sbjct: 489 GGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVEN-MPMEPDVIAW 547
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI----PTP 489
+L + +++ ++DL A E ++ ++P+ + D KI
Sbjct: 548 GSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKAR 607
Query: 490 PPKKRTAISI--LDGKSRLVEFRNPTLYRDDEKLKALN----QMKESTYVPDTRYVLHDI 543
KK +S + K+ + + + DE K ++ ++K+ + PDT VLHD+
Sbjct: 608 GVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDL 667
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ E K+Q L YHSE+LAIA+G+ISTP T LRI+KNLRVC DCHNAIK +S++V RE+IV
Sbjct: 668 EVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIV 727
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHFKDG CSC DYW
Sbjct: 728 RDATRFHHFKDGSCSCKDYW 747
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK--- 324
L D +K D + C N + K++H Y +++ + N +I MY K
Sbjct: 231 LKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGG 290
Query: 325 ------------------------------CGSMTDARRVFDHMADRSMDSWHLMINGYA 354
G +T AR++F+ + D + +W MI GY
Sbjct: 291 VEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYV 350
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG 413
NGL ++ +++F+ M G +PN T A+ SA S ++ IH +++S +SP
Sbjct: 351 QNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPS 410
Query: 414 TEHYL 418
+ L
Sbjct: 411 VGNAL 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ +L + P D V ++ + Q G+ ++AI++ VK
Sbjct: 43 SWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTI--IVGYNQMGRFEDAIKIFVDMVK 100
Query: 275 ADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+ C KKVH + ++ + + + N ++ MY K G +
Sbjct: 101 DKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKM 160
Query: 331 ARRVFDHM-------------------------------ADRSMDSWHLMINGYADNGLG 359
A+ VFD M ++R + SW+ MI G +G
Sbjct: 161 AKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFD 220
Query: 360 DEGLQLFEQMRK-LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHY 417
+E LQ F + K L+P+ + + SAC + + + IH +++ F S +
Sbjct: 221 NEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN- 279
Query: 418 LGLVGVLGKCGHLFEAQQFIEQK-LPFEPTAEFWEALRNYARIHGDI 463
L+ + K G + A++ IEQ + F L Y ++ GDI
Sbjct: 280 -ALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKL-GDI 324
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
HD F + ++ N ++ Y K G + A +VFD + R SW +I GY G
Sbjct: 30 HDLFNEMPVKTTFSWNT-ILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRF 88
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
++ +++F M K + P + T V ++C +
Sbjct: 89 EDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 218/400 (54%), Gaps = 36/400 (9%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + AIE+ + V D++ F T C + ++V + + +
Sbjct: 187 QNGLAERAIEVYREMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVF 246
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + ++ MY +CG ++ AR FD + +R++ +W MI GY +G G E ++LF MR G
Sbjct: 247 LGSALVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEG 306
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN+ TF+AV +AC A + E F+SMK +G+ P EHY +V + G+ G L +A
Sbjct: 307 PTPNDVTFVAVLAACAHAGLVNEGRSAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDA 366
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK--------- 484
QFI +P EP E W A+ ++H + +L E ++ L+P +
Sbjct: 367 MQFIRDSIPGEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYAL 426
Query: 485 --------KIPTPPPKKRTAISI------LDGKSRLVEFRNPT------LYRDDEKLKAL 524
K+ K+R I L G S L + +Y+ E+L +
Sbjct: 427 SGKMNHVEKVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYQYLEEL--I 484
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL-ISTPARTPLRIIKNLRVC 583
+++ ++ YVP+T VLH++++E +E AL YHSE+LA+AYGL +S+ + TP+R+IKNLR+C
Sbjct: 485 HRISDAGYVPETDSVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTTPIRVIKNLRIC 544
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH AIK MS + RE+IVRD RFHHFKDGKCSC +YW
Sbjct: 545 GDCHLAIKFMSSVESREIIVRDKHRFHHFKDGKCSCLEYW 584
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH + + D + ++ +Y KCG + AR++FD + DRS+ +W+ MI+GY NGL
Sbjct: 131 VHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGL 190
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---EAFIHFESMKSEFGISPGTE 415
+ ++++ +M+ + P+ TF+ SAC A A++ E S + + + G+
Sbjct: 191 AERAIEVYREMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGS- 249
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + +CG + +A+ + ++
Sbjct: 250 ---ALVNMYARCGLVSKARDWFDR 270
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 224/405 (55%), Gaps = 33/405 (8%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWY-ENAKKVHDYFLQ 305
A LA Q G+ +EA +L+ +G+K + F ++ C +P E K+ H Y ++
Sbjct: 464 AMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIK 523
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ L +++ ++ MY K G++ A VF +R + SW+ MI+GY+ +G + L++
Sbjct: 524 MRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEV 583
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F++M+K + + TF+ V +AC A +E+ +F SM ++ I+P +HY ++ +
Sbjct: 584 FDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYS 643
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+ G L +A I + +PF P A W L AR+H +++L + A E ++ L P +
Sbjct: 644 RAGMLEKAMGIINE-MPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYV 702
Query: 484 -------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDE 519
K + KK S ++ K++ F +P +
Sbjct: 703 LLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYS 762
Query: 520 KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
KL L+ ++K++ Y PDT+ V HDI+ E KE L +HSERLAIA+GLI+TP P++I+K
Sbjct: 763 KLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVK 822
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCHN K++S + R ++VRD+ RFHHFKDG CSCGDYW
Sbjct: 823 NLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ L+ ++ D S +F +C + ++VH ++ + + + +++MY K
Sbjct: 82 VSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKT 141
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
++ D RRVFD M +R++ SW ++ GY+ NGL +LF QM+ G+ PN T V
Sbjct: 142 ENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVI 201
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+A + + + + +M + G + L+ + + G L +A+ + K+
Sbjct: 202 AALVN-EGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFD-KMEIRD 259
Query: 446 TAEFWEALRNYARIHGDIDL 465
+ + Y R D+++
Sbjct: 260 WVTWNSMIAGYVRNGQDLEV 279
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH ++ + + N +I +Y + G + DAR VFD M R +W+ MI GY NG
Sbjct: 215 QVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNG 274
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH 416
E ++F +M+ G++P TF +V +C S + + +++KS G +
Sbjct: 275 QDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKS--GFTTDQIV 332
Query: 417 YLGLVGVLGKCGHLFEA 433
L+ L KC + +A
Sbjct: 333 ITALMVALSKCKEMDDA 349
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++ Y K G+ DA +VF+ + + + +W M+ GYA G +E +LF Q+ K G
Sbjct: 430 VGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG 489
Query: 374 LQPNEQTFLAVFSACGSADAIEE 396
++PNE TF +V +AC S A E
Sbjct: 490 IKPNEFTFSSVINACASPTAAAE 512
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A + G+ E E+ +K GVK F ++ + C + + K + L+S
Sbjct: 267 IAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGF 326
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFE 367
D ++ ++ KC M DA +F M + +++ SW MI+G NG D+ + LF
Sbjct: 327 TTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFS 386
Query: 368 QMRKLGLQPNEQTFLAVFSA 387
QMR+ G++PN T+ A+ +
Sbjct: 387 QMRREGVKPNHFTYSAILTV 406
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 211/380 (55%), Gaps = 31/380 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ DA ++ CG+ +++H+Y + +R +L+L N +I+MY KCG + +A
Sbjct: 301 GVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEA 360
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VFD M R + SW MI+ Y +G G + + LF++MR G P+ F++V +AC A
Sbjct: 361 RAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHA 420
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
++E F M +E+GI+PG EHY +V +LG+ G + EA Q +P EP W
Sbjct: 421 GLVDEGRYCFNLM-AEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQ-MPMEPNERVWG 478
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKK-------RTAISILDGKS 504
+L + R++ +++ A + + L P ++ + + K T SI++ K
Sbjct: 479 SLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKG 538
Query: 505 RL-------VEFRNPTLY----------RDDEKLKAL----NQMKESTYVPDTRYVLHDI 543
VE N +Y + E KAL +MKE Y+P+T LHD+
Sbjct: 539 IKKIPGNSNVEI-NDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDV 597
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E KE L HSE+LAI + +++T + +RI KN+RVCGDCH A K++S+I RE+I+
Sbjct: 598 EEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIII 657
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF+DG CSCGDYW
Sbjct: 658 RDTHRFHHFRDGVCSCGDYW 677
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H ++ + +L + N ++ MYGKC + ARRV D M R M SW+ M+ GYA NG
Sbjct: 158 QIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNG 217
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVF-----SACGSADAIEEAFIHFE 402
++ L+L +M L L+P+ T ++ ++C + +++ F+ +
Sbjct: 218 RFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLK 267
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L K++ Y CG R +FD + D+++ +++MI Y +NGL + L +F+ M G
Sbjct: 73 LGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQG 132
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
P+ T+ V AC + + IH +K G+ GLV + GKC L
Sbjct: 133 FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVK--LGLDMNLYIGNGLVSMYGKCKWLDA 190
Query: 433 AQQFIEQ 439
A++ +++
Sbjct: 191 ARRVLDE 197
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
C ++ + +F + ++S+ SW++MI Y +N + +E + L+ QM+ G++P+ + +V
Sbjct: 253 CDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSV 312
Query: 385 FSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
ACG + A+ IH + + + P L+ + KCG L EA+ +Q +
Sbjct: 313 LPACGDLSAAVLGRRIHEYVERKK--LRPNLLLENALIDMYAKCGCLKEARAVFDQMM 368
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 208/371 (56%), Gaps = 30/371 (8%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E + +H + +++ + + + + +++MYGKCG + D+ + FD M ++
Sbjct: 265 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 324
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
++ + + +I GYA G D L LFE+M R G PN TF+++ SAC A A+E
Sbjct: 325 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 384
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
F+SM+S +GI PG EHY +V +LG+ G + A +FI +K+P +PT W AL+N R+
Sbjct: 385 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI-KKMPIQPTISVWGALQNACRM 443
Query: 460 HGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAIS 498
HG L A E + LDP + +++ KK S
Sbjct: 444 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 503
Query: 499 ILDGKSRLVEF----RNPTLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+ K+++ F R+ L ++ + K N+M+ + Y PD + L+D+++E K +
Sbjct: 504 WITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEV 563
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
+HSE+LA+A+GL+S P P+RI KNLR+CGDCH+ K +S V RE+IVRDN RFH F
Sbjct: 564 SHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRF 623
Query: 613 KDGKCSCGDYW 623
KDG CSC DYW
Sbjct: 624 KDGICSCKDYW 634
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 22/254 (8%)
Query: 259 EGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+G+ +EAIE + + D + F C + ++H L+S D+ +
Sbjct: 137 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 196
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I+ YGKC + + +F M ++ SW ++ Y N ++ L+ + RK +
Sbjct: 197 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 256
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLF 431
+ ++ +V SAC +E IH ++K+ E I G+ LV + GKCG +
Sbjct: 257 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS----ALVDMYGKCGCIE 312
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
+++Q ++ +P + + YA G +D+ A L ++ P P P
Sbjct: 313 DSEQAFDE-MPEKNLVTRNSLIGGYAH-QGQVDM---ALALFEEMAPRGCG------PTP 361
Query: 492 KKRTAISILDGKSR 505
T +S+L SR
Sbjct: 362 NYMTFVSLLSACSR 375
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 264 EAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
E E+ +GV + F F+ + + K++H ++ D+ + +MY
Sbjct: 45 EFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYC 104
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K DAR++FD + +R++++W+ I+ +G E ++ F + R++ PN TF A
Sbjct: 105 KTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCA 164
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+AC + +H ++S F + GL+ GKC + + + I ++
Sbjct: 165 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN--GLIDFYGKCKQI-RSSEIIFTEMG 221
Query: 443 FEPTAEFWEALRNYARIHGD 462
+ + + Y + H D
Sbjct: 222 TKNAVSWCSLVAAYVQNHED 241
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K AR V R++ SW +I+G A NG L F +MR+ G+ PN+ T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 381 FLAVFSACGS 390
F F A S
Sbjct: 61 FPCAFKAVAS 70
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 208/371 (56%), Gaps = 30/371 (8%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E + +H + +++ + + + + +++MYGKCG + D+ + FD M ++
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
++ + + +I GYA G D L LFE+M R G PN TF+++ SAC A A+E
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
F+SM+S +GI PG EHY +V +LG+ G + A +FI +K+P +PT W AL+N R+
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI-KKMPIQPTISVWGALQNACRM 493
Query: 460 HGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAIS 498
HG L A E + LDP + +++ KK S
Sbjct: 494 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 553
Query: 499 ILDGKSRLVEF----RNPTLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+ K+++ F R+ L ++ + K N+M+ + Y PD + L+D+++E K +
Sbjct: 554 WITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEV 613
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
+HSE+LA+A+GL+S P P+RI KNLR+CGDCH+ K +S V RE+IVRDN RFH F
Sbjct: 614 SHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRF 673
Query: 613 KDGKCSCGDYW 623
KDG CSC DYW
Sbjct: 674 KDGICSCKDYW 684
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 22/254 (8%)
Query: 259 EGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+G+ +EAIE + + D + F C + ++H L+S D+ +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I+ YGKC + + +F M ++ SW ++ Y N ++ L+ + RK +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLF 431
+ ++ +V SAC +E IH ++K+ E I G+ LV + GKCG +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS----ALVDMYGKCGCIE 362
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
+++Q ++ +P + + YA G +D+ A L ++ P P P
Sbjct: 363 DSEQAFDE-MPEKNLVTRNSLIGGYAH-QGQVDM---ALALFEEMAPRGCG------PTP 411
Query: 492 KKRTAISILDGKSR 505
T +S+L SR
Sbjct: 412 NYMTFVSLLSACSR 425
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 264 EAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
E E+ +GV + F F+ + + K++H ++ D+ + +MY
Sbjct: 95 EFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYC 154
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K DAR++FD + +R++++W+ I+ +G E ++ F + R++ PN TF A
Sbjct: 155 KTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCA 214
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+AC + +H ++S F + GL+ GKC + + + I ++
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN--GLIDFYGKCKQI-RSSEIIFTEMG 271
Query: 443 FEPTAEFWEALRNYARIHGD 462
+ + + Y + H D
Sbjct: 272 TKNAVSWCSLVAAYVQNHED 291
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I MY K AR V R++ SW +I+G A NG L F +MR+ G
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG 103
Query: 374 LQPNEQTFLAVFSACGS 390
+ PN+ TF F A S
Sbjct: 104 VVPNDFTFPCAFKAVAS 120
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 214/402 (53%), Gaps = 41/402 (10%)
Query: 258 QEGKVKEAIELMDKGVKADASCF-----YTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EA E+ + VK F T+ + K +HD ++ + D+
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ +I+MY KCG + AR+ FD M ++++ SW MI GY +G + L+LF M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++PN TF++V +AC A E + F +MK FG+ PG EHY +V +LG+ G L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
A I Q++ +P + W +L RIH +++L + + + +LD S
Sbjct: 443 AYDLI-QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Query: 482 ------DPKKI--------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
D +++ PP S+L+ + F +P + E L
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPP----GFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
LN ++ E+ YV +T V HD+D+E KE L HSE+LAIA+G+++T + + ++KNLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCHN IK++S+IV RE +VRD KRFHHFKDG CSCGDYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ADLAR + A M K + S F + C + + K+ H
Sbjct: 48 IADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D+ +++ +I MY CG + DAR+VFD + R++ SW MI GY NG + + LF+
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 369 MRKLGLQPNEQTFL------AVFSACGS--ADAIEEAFIHFESMKSEF--GISPG 413
+ ++ FL +V SAC A + E+ IH +K F G+S G
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES-IHSFVIKRGFDRGVSVG 221
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 17/150 (11%)
Query: 334 VFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F+ D++ + SW+ +I A +G E L F MRKL L P +F AC S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 393 AI-------EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
I ++AF+ FG L+ + CG L +A++ ++ +P
Sbjct: 91 DIFSGKQTHQQAFV--------FGYQSDIFVSSALIVMYSTCGKLEDARKVFDE-IPKRN 141
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+ +R Y +D ++L+VD
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVD 171
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG--S 327
D + D+ ++ C + +H + ++ + + N +++ Y K G
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ AR++FD + D+ S++ +++ YA +G+ +E ++F ++ K
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 222/413 (53%), Gaps = 33/413 (7%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKK 298
D+ + A L L Q G ++A+ L ++G+ A++ F +L C + + +
Sbjct: 394 DRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRS 453
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNG 357
+H + + D+V +++MY KCG + A R+F H + + + W+ MI GY +G
Sbjct: 454 IHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHG 513
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G + + ++ +M + GL+PN+ TFL++ SAC + +E+ F SM+ + I P +HY
Sbjct: 514 HGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHY 573
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
LV +L + G EAQ IE K+PF+P EAL + R H +I+L + ++ LD
Sbjct: 574 ACLVDLLSRAGRFEEAQALIE-KMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALD 632
Query: 478 PSKADPKKIPT---PPPKKRTAISILDGKSR-----------LVEFRN--PTLYRDDEK- 520
+ + ++ + + G R LVE N T + D
Sbjct: 633 AMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSH 692
Query: 521 ---------LKALNQMKEST-YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
L++L E++ YVPDT VL D+D+E K + L HSERLAIA+GL++TPA
Sbjct: 693 PNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPA 752
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ +RI KNLRVCGDCH K +S+IV RE+IVRD RFHHF +G+CSCGDYW
Sbjct: 753 GSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 9/216 (4%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ + G V E+ +L + V++ D + +L + C K +H ++S
Sbjct: 302 AMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS 361
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+L+L+ ++++Y KCGS+ A VF+ M DR++ +W M+ G A NG ++ L+LF
Sbjct: 362 -FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLF 420
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
QM++ G+ N TF+++ +C +++ IH + G + + LV +
Sbjct: 421 AQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR--LGFAFDIVNMTALVDMYA 478
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG + A++ W ++ +HG
Sbjct: 479 KCGKINLAERIFSHG-SISKDVVLWNSMITGYGMHG 513
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 254 ARLC---QEGKVKEAIELM----DKGVKADA-SCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A LC Q G+ +E +EL + ++ D+ SC + L + C + YE ++ ++
Sbjct: 100 AMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFAL-KACASSLDYEMGMEIISSAVE 158
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + + + +I K G + +A+RVFD M ++ + W+ +I GY G D QL
Sbjct: 159 KGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQL 218
Query: 366 FEQMRKLGLQPNEQTFLAVFSACG 389
F +M G++P+ T ++ ACG
Sbjct: 219 FFEMHGSGIKPSPITMTSLIQACG 242
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + + E+ G+K +L + CG + K +H Y L + D+++
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLT 270
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++MY K G + AR VF M R++ SW+ MI+G NGL E LF ++ +
Sbjct: 271 SFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF 330
Query: 377 NEQTFLAVFSACGSADAIEEAFI----HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ T +++ C ++ I S +S +S +V + KCG L +
Sbjct: 331 DLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILST------AIVDLYSKCGSLKQ 384
Query: 433 A 433
A
Sbjct: 385 A 385
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
N W K H + +++ D + K+++ Y S+ AR VFD +
Sbjct: 44 NLIW---VKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNA 100
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
M+ GY +G E L+LF MR L+ + + AC S+ E + E + S
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYE---MGMEIISS-- 155
Query: 409 GISPGTE--HYLG--LVGVLGKCGHLFEAQQFIE 438
+ G E ++G ++ L K G + EAQ+ +
Sbjct: 156 AVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFD 189
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 216/389 (55%), Gaps = 31/389 (7%)
Query: 264 EAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
E LM + ++ D + L CG+ + +++ +++ + + L N +I M
Sbjct: 447 ETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMN 506
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K GS+ AR +FD M R + +W+ MI GY+ +G E L LF++M K +PN TF+
Sbjct: 507 AKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFV 566
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
V SAC A ++E F + GI P + Y +V +LG+ G L EA+ I + +P
Sbjct: 567 GVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLI-KSMP 625
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------------SKAD 482
+PT+ W +L RIHG++D+ + A E + +DP + A
Sbjct: 626 VKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAK 685
Query: 483 PKKIPTPPPKKR----TAISILDGK--SRLVEFRNPTLYRD--DEKLKALNQMKESTYVP 534
+K+ ++ T I + GK + +VE R+ L + E + +N +K Y+P
Sbjct: 686 VRKVMESRGIRKEQGCTWIEV-AGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIP 744
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
T+ VLHD+ ++ KE+A+ YHSE+LAIAYG++S P+ TP+RI KNLRVC DCH+A K +S
Sbjct: 745 ITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFIS 804
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ GRE+I RD RFHHFKDG CSCGDYW
Sbjct: 805 KVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G ++A EL + G+K + F ++ + C P+ K VH + + + D+
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I MY CGS+ ARRVFD+M R + SW +MI GYA+NG ++ LF M++ G
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG 355
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP-GTEHYL--GLVGVLGKCGHL 430
+QP+ T++ + +AC AI H + S+ I+ GT+ + LV + KCG +
Sbjct: 356 IQPDRITYMHIMNAC----AISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAI 411
Query: 431 FEAQQFIE 438
+A+Q +
Sbjct: 412 KDARQVFD 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G VKEA L +D+G++ F ++ + C +P K+VH + +
Sbjct: 128 ALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTA 187
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + ++ MY K GSM DAR+VFD + R + ++++M+ GYA +G ++ +LF
Sbjct: 188 GFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF 247
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M+++GL+PN+ +FL++ C + +A+ +H + M + G+ L+ +
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA--GLVDDIRVATSLIRMYT 305
Query: 426 KCGHLFEAQQFIE 438
CG + A++ +
Sbjct: 306 TCGSIEGARRVFD 318
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G +++A L ++G++ D + + C +A+++H + DL+
Sbjct: 337 ENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLL 396
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ ++ MY KCG++ DAR+VFD M R + SW MI Y +NG G E + F M++
Sbjct: 397 VSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSN 456
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF 408
++P+ T++ + +ACG A++ I+ +++K++
Sbjct: 457 IEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADL 492
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 36/246 (14%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L + G D+ + LF+ C + K+V D+ +Q + ++ N +I++Y CG+
Sbjct: 48 LGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGN 107
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+T+AR++FD + ++++ +W+ +I GYA G E LF QM GL+P+ TFL+V A
Sbjct: 108 VTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDA 167
Query: 388 CGS-----------ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
C S A + F+ S+F I LV + K G + +A+Q
Sbjct: 168 CSSPAGLNWGKEVHAQVVTAGFV------SDFRIGT------ALVSMYVKGGSMDDARQV 215
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA 496
+ L + F + YA+ GD + A EL + P KI +
Sbjct: 216 FD-GLHIRDVSTFNVMVGGYAK-SGD---WEKAFELFYRMQQVGLKPNKI--------SF 262
Query: 497 ISILDG 502
+SILDG
Sbjct: 263 LSILDG 268
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 215/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ +++EA+E+ K G K D + Y++ C + K++H Y + DL
Sbjct: 557 KNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLA 616
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N +++MY KCG ++ +R VFD M + + SW+ MI +G G E L LFE+M
Sbjct: 617 RTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSM 676
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ TF V SAC + +EE F SM + + P EHY +V + + G L EA
Sbjct: 677 VKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEA 736
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------P 483
FI Q++P EPTA W+A R++ +++L + + + ++DP+ +
Sbjct: 737 YGFI-QRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVT 795
Query: 484 KKIPTPPPKKRT-----AISILDGKSRL-VEFRNPTLYRDD----EKLKALN-------Q 526
K+ + K R I+ G S V R T D E K N +
Sbjct: 796 AKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAK 855
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K + Y PDT YVLHDIDQE K ++L HSE+LA+A+G+++ ++ +R+ KNLR+CGDC
Sbjct: 856 IKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDC 915
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNAIK MS +VG ++VRD+ RFHHFK+G CSC D+W
Sbjct: 916 HNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ GVK D ++ C + + ++ K +H + ++ + D+ + N ++ +Y KC
Sbjct: 434 EMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCV 493
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +A+ VFD + R + SW+ ++ Y N ++GL +F QM + ++ +E T+ V
Sbjct: 494 CVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIG 553
Query: 387 ACGSADAIEEAFIHFESMKSEFGISP 412
C IEEA F M++ G P
Sbjct: 554 GCVKNSRIEEAMEIFRKMQT-MGFKP 578
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ GVK D ++ C K ++ K +H + ++ + D+ + ++ +Y C
Sbjct: 333 EMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCL 392
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +A+ VFD M R++ +W+ + + Y + G +GL +F +M G++P+ T L++
Sbjct: 393 CVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILH 452
Query: 387 AC 388
AC
Sbjct: 453 AC 454
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+K D F + + C + K+ HD + + D+ + N I YGKC +
Sbjct: 34 RGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEG 93
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
ARRVFD + R + +W+ + Y + G +GL +F +M ++ N T ++ C
Sbjct: 94 ARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGC 151
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ GVK D + C + + ++ K +H + L+ + ++ ++N ++ +Y C
Sbjct: 232 EMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCL 291
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +A+ VFD M R++ +W+ + + Y + G +GL +F +M G++P+ ++
Sbjct: 292 CVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILP 351
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC ++ IH ++K G+ LV + C + EAQ +
Sbjct: 352 ACSQLKDLKSGKTIHGFAVKH--GMVEDVFVCTALVNLYANCLCVREAQTVFD 402
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 63/116 (54%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VKA+ ++ C + + ++ K++H + ++ + D+ +++ + Y KC + +A+
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
VFD M R + +W+ + + Y + G +GL +F +M G++P+ T + SAC
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 209/389 (53%), Gaps = 28/389 (7%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V +++ + G+K DA +L CG+ +++H Y + ++ +L+L N +++M
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDM 350
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG + +AR VFD M R + SW M++ Y +G G + + LF +M G P+ F
Sbjct: 351 YAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAF 410
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
++V SAC +++ +F M ++GI P EH+ +V + G+ G + EA FI+Q +
Sbjct: 411 VSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ-M 469
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADPKK--- 485
P EP W AL + R+H +D+ A +L+ L P +KA K
Sbjct: 470 PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVM 529
Query: 486 -----IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKAL-NQMKESTYVP 534
+ KK IS ++ ++ F Y K L L +MKE Y+P
Sbjct: 530 NVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIP 589
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
T LHD++ E KE L HSE+LAI + +++T TP+RI KNLRVCGDCH AIK++S
Sbjct: 590 QTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLIS 649
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IV R +IVRD RFHHF +G CSCGDYW
Sbjct: 650 KIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VHD ++ + +L + N ++ MYGKCG + +AR+V D M R + SW+ M+ GYA +G
Sbjct: 158 QVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSG 217
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGIS 411
D+ L++ ++M L L + T +A S ++E +IH FE M + IS
Sbjct: 218 QFDDALEICKEMDSLNLNHDAGT-MASLSPVVCYTSLENVQYIHNMFERMTKKNLIS 273
>gi|302818918|ref|XP_002991131.1| hypothetical protein SELMODRAFT_132950 [Selaginella moellendorffii]
gi|300141062|gb|EFJ07777.1| hypothetical protein SELMODRAFT_132950 [Selaginella moellendorffii]
Length = 582
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 216/400 (54%), Gaps = 36/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G++K ++EL K GV+ D+ T + C + VH + + D+
Sbjct: 185 QNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCAASGNLHEGRVVHGWITMKGLEQDVF 244
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++MYGKCGS+ +A VFD+M +++ SW+ M+ Y +G E +Q+F QM + G
Sbjct: 245 VGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVEAYCSSGYSTEAIQVFLQMLQEG 304
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN +TF +V ACG A I E +H M S++ + P EHY VG+LG+ G + EA
Sbjct: 305 VKPNAKTFTSVLVACGHAGFIREGILHLVYMSSDYDVVPIAEHYACAVGLLGRSGWVKEA 364
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
++++ +KLP + A W+AL RIHGD+D A E +++ P A
Sbjct: 365 EEYV-KKLP-DAEAPVWDALVTACRIHGDLDRGRSAAESLLECSPHAARSYAVVAGLYNA 422
Query: 482 -----DPKKIPTPPPKK-----RTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ 526
D ++ K R SIL G + EF R+ + +L+ L Q
Sbjct: 423 LARSDDAARVRETMTSKGLTEERVTSSILVGNTTCHEFITADTRHKRIQGIHAELEDLGQ 482
Query: 527 -MKESTYVPD-TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ + Y PD ++ ++H+ +E ++++L YHSERLA+ G I PLRII+N R+C
Sbjct: 483 RIAKDGYAPDASKLLMHERAEEQRQESLFYHSERLAVGLGAIKIRGDCPLRIIRNFRMCA 542
Query: 585 DCHNAIKIMSRIVGRELIVRD-NKRFHHFKDGKCSCGDYW 623
DCH AIK MS+ +GR +I+RD + + H F DG C+C DYW
Sbjct: 543 DCHTAIKFMSKAMGRTIILRDGSSQLHRFVDGHCACRDYW 582
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + LC K +++H+ +Q I L L +++MY CGS+ +AR +FD +
Sbjct: 5 FLYIVRLCTRLKALVAGRRIHEQLVQMGIAEQLPLAKFIVQMYLSCGSLDEARNLFDLLP 64
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEA- 397
+ + W +I YA G E ++LFE M + G P + T+ AV + SA+++ A
Sbjct: 65 SKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTG--PAKATYFAVMKSFASAESLAGAR 122
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+H S E G L+ + G+CG L EA +
Sbjct: 123 LVH--SRIVELGAENDDLVRAALIEMYGRCGSLEEAWSIFSSSVA 165
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL---MDKGVKADASCFYTL 283
L+ N + P+ D + +V +A + G+ +EAI+L M+ + ++ +
Sbjct: 51 GSLDEARNLFDLLPSKDVGMWTAV--IAAYAKYGRWQEAIKLFETMESRTGPAKATYFAV 108
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD--- 340
+ + + A+ VH ++ D ++ +IEMYG+CGS+ +A +F
Sbjct: 109 MKSFASAESLAGARLVHSRIVELGAENDDLVRAALIEMYGRCGSLEEAWSIFSSSVAGDG 168
Query: 341 --RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA- 397
S+ W+ +I+ NG L+LF +MR+ G++P+ T C ++ + E
Sbjct: 169 GPHSVLVWNAIISASFQNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCAASGNLHEGR 228
Query: 398 FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+H + +MK G+ LV + GKCG + EA
Sbjct: 229 VVHGWITMK---GLEQDVFVGNALVDMYGKCGSVEEA 262
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 214/402 (53%), Gaps = 41/402 (10%)
Query: 258 QEGKVKEAIELMDKGVKADASCF-----YTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EA E+ + VK F T+ + K +HD ++ + D+
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ +I+MY KCG + AR+ FD M ++++ SW MI GY +G + L+LF M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++PN TF++V +AC A E + F +MK FG+ PG EHY +V +LG+ G L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
A I Q++ +P + W +L RIH +++L + + + +LD S
Sbjct: 443 AYDLI-QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Query: 482 ------DPKKI--------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
D +++ PP S+L+ + F +P + E L
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPP----GFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
LN ++ E+ YV +T V HD+D+E KE L HSE+LAIA+G+++T + + ++KNLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCHN IK++S+IV RE +VRD KRFHHFKDG CSCGDYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ADLAR + A M K + S F + C + + K+ H
Sbjct: 48 IADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D+ +++ +I MY CG + DAR+VFD + R + SW MI GY NG + + LF+
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 369 MRKLGLQPNEQTFL------AVFSACGS--ADAIEEAFIHFESMKSEF--GISPG 413
+ ++ FL +V SAC A + E+ IH +K F G+S G
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES-IHSFVIKRGFDRGVSVG 221
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 17/150 (11%)
Query: 334 VFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F+ D++ + SW+ +I A +G E L F MRKL L P +F AC S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 393 AI-------EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
I ++AF+ FG L+ + CG L +A++ ++ +P
Sbjct: 91 DIFSGKQTHQQAFV--------FGYQSDIFVSSALIVMYSTCGKLEDARKVFDE-IPKRD 141
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVD 475
+ +R Y +D ++L+VD
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVD 171
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG--S 327
D + D+ ++ C + +H + ++ + + N +++ Y K G
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ AR++FD + D+ S++ +++ YA +G+ +E ++F ++ K
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 204/404 (50%), Gaps = 49/404 (12%)
Query: 261 KVKEAIELM------DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+ K+A++L D G + D L + C + + ++V Y + L +
Sbjct: 200 RTKDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKV 259
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I MY +CG + A RVF +S+ +W MI+G A NG GD+ + FE+M + +
Sbjct: 260 RNSLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDV 319
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+EQTF V SAC + ++E F F+ M+ E+G+ P HY +V ++G+ G L EA
Sbjct: 320 APDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAY 379
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------------ 482
+ + ++ P A W L RIHG +DL + +++L +A
Sbjct: 380 ELVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAV 439
Query: 483 --------------PKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEK 520
K I T P + ++ + EF R +Y EK
Sbjct: 440 GEWSKVSEVRKLMQEKGIQTTP-----GCTTVEHNGEVYEFIADDDAHPRKVEIY---EK 491
Query: 521 LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L +N Q++ + YVP+ LHD+D E KE AL YHSE+LAIA+ L+ TP P+R+ KN
Sbjct: 492 LNEINKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKN 551
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCHN K+ S I R +IVRD RFHHF+ GKCSC DYW
Sbjct: 552 LRVCVDCHNFTKVFSGIYNRLVIVRDRTRFHHFQGGKCSCNDYW 595
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A+++H + D +L ++ Y G AR++F M R +W+++I+ A
Sbjct: 137 HARQLHANVVAEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCA 196
Query: 355 DNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAIE 395
N + L+LFE+M R G +P++ T + + AC S A++
Sbjct: 197 RNRRTKDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALD 239
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 217/403 (53%), Gaps = 43/403 (10%)
Query: 258 QEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EAIE+ + + A+ + ++ C K+H L++ + D+
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ + +MYGKCG + DA +F + + W+ +I + +G G++ + LF++M
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF+ + SAC + ++E FE M++++GI+P +HY +V + G+ G L
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------- 478
A +FI + + +P A W AL + R+HG++DL A E + +++P
Sbjct: 607 ALKFI-KSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYA 665
Query: 479 ------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPT------LYRDDEK 520
S A K + P + D K + N T +YR+
Sbjct: 666 SAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV---DNKVEVFYTGNQTHPMYEEMYRELTA 722
Query: 521 LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
L+A ++K YVPD R+VL D++ + KE L+ HSERLAIA+ LI+TPA+T +RI KNL
Sbjct: 723 LQA--KLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNL 780
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVCGDCH+ K +S+I RE+IVRD+ RFHHFK+G CSCGDYW
Sbjct: 781 RVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A ++ CQ G KEA+ L + D+ +L C + +H Y ++ +
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L ++NK+I++Y + G + D ++VFD M R + SW+ +I Y N + LF++MR
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 371 KLGLQPNEQTFLAVFS 386
+QP+ T +++ S
Sbjct: 341 LSRIQPDCLTLISLAS 356
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ + N V+ MY K G + AR VF+ + + + SW+ +I+GYA NG E ++++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ G + N+ T+++V AC A A+ + +H +K+ G+ L + GKCG
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCG 500
Query: 429 HLFEAQQFIEQ 439
L +A Q
Sbjct: 501 RLEDALSLFYQ 511
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+TLF C N ++AK +H + S ++ ++ K++ +Y G++ AR FDH+ +
Sbjct: 58 HTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN 114
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQ-MRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
R + +W+LMI+GY G E ++ F M GL P+ +TF +V AC + I+ I
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT--VIDGNKI 172
Query: 400 HFESMKSEF 408
H ++K F
Sbjct: 173 HCLALKFGF 181
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
++ ++ G+ D F ++ + C + + K+H L+ D+ + +I +Y +
Sbjct: 141 SLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 197
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
++ +AR +FD M R M SW+ MI+GY +G E L L +R + + T +++
Sbjct: 198 YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSL 253
Query: 385 FSACGSA-DAIEEAFIHFESMK----SEFGISPGTEHYLGLVGVLGKCGHLFE 432
SAC A D IH S+K SE +S G L C +F+
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 210/378 (55%), Gaps = 29/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ DA ++ CG+ +++H+Y + + +++L N +I+MY +CG + DA+
Sbjct: 298 VEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAK 357
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVFD M R + SW +I+ Y G G + LF +M+ G P+ F+A+ SAC +
Sbjct: 358 RVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSG 417
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ E +F+ M ++ I+P EH+ LV +LG+ G + EA I+Q +P +P W A
Sbjct: 418 LLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQ-MPMKPNERVWGA 476
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKR------TAISILDGKSRL 506
L + R++ ++D+ A + ++ L P ++ + + K TAI L + R+
Sbjct: 477 LLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRI 536
Query: 507 --------VEFRNP--TLYRDD----------EKLKAL-NQMKESTYVPDTRYVLHDIDQ 545
VE N T D E+L L +MKE YVP T LHD+++
Sbjct: 537 RKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEE 596
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
E KE L HSE+LAI + +++T +P+RI KNLRVCGDCH A K++S+IV RE+++RD
Sbjct: 597 EDKECHLAVHSEKLAIVFAILNTQ-ESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRD 655
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHFKDG CSCGDYW
Sbjct: 656 TNRFHHFKDGICSCGDYW 673
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ G D + + + C ++H + + +L + N +I +YGKCG
Sbjct: 123 DMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCG 182
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +AR V D M + + SW+ M+ GYA N D+ L + +M + +P+ T ++
Sbjct: 183 CLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLP 242
Query: 387 ACGSADA-----IEEAFIHFE 402
A + + +EE F++ E
Sbjct: 243 AVTNTSSENVLYVEEMFMNLE 263
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ K VH + + L K++ Y G AR VFD + +R++ +++MI Y
Sbjct: 49 KTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSY 108
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+N L D+ L +F M G P+ T+ V AC +D + I + + F +
Sbjct: 109 MNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLR---IGLQLHGAVFKVGLD 165
Query: 414 TEHYL--GLVGVLGKCGHLFEAQQFIEQ 439
++ GL+ + GKCG L EA+ +++
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDE 193
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 213/397 (53%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ ++A+E++ + G K + ++ C N + K++H Y + DL
Sbjct: 292 QNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLT 351
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ MY KCG + +RRVF M R SW+ MI + +G G+E L LF +M G
Sbjct: 352 TTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSG 411
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TF V S C + ++E + F+SM + + P +H+ +V VL + G L EA
Sbjct: 412 VRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEA 471
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+FI +K+P EPTA W AL R++ +++L A + +++
Sbjct: 472 YEFI-KKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVS 530
Query: 479 ------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALNQMKE- 529
+ K + K S + ++R+ F D DE + L+ M E
Sbjct: 531 AKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEK 590
Query: 530 ---STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+ Y+P+T +VL D+DQE KE+ L HSE+LA+A+G+++ + +R+ KNLR+CGDC
Sbjct: 591 MRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDC 650
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNAIK M++IVG ++IVRD+ RFHHF+DG CSC D+W
Sbjct: 651 HNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMD-----KGVKADASCFYTLFELCGNPKWYENAKKVH 300
LP ++ L + G+ EAI+ + V+ D ++ + C + + NAK+VH
Sbjct: 42 LPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVH 101
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
+ ++ D++L N +I+MYGKC AR VF+ M R + SW M + Y + GL
Sbjct: 102 EDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLR 161
Query: 361 EGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
E L F +M G +PN T ++ AC
Sbjct: 162 EALGAFRKMGLNGERPNSVTVSSILPAC 189
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 109/239 (45%), Gaps = 15/239 (6%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++EA+ K G + ++ ++ C + K ++ ++VH + +++ + G++ ++
Sbjct: 158 GLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVS 217
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ ++ MY C S+ A+ VFD M+ R SW+++I Y N ++GL +F +M G+
Sbjct: 218 SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVG 277
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL----- 430
N ++ AV C E+A M++ G P + + + VL C +L
Sbjct: 278 LNYASWNAVIGGCMQNGRTEKALEVLSRMQNS-GFKP---NQITITSVLPACTNLESLRG 333
Query: 431 -FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+ +I + F+ + YA+ GD++L +M D + I T
Sbjct: 334 GKQIHGYIFRHWFFQDLTTTTALVFMYAKC-GDLELSRRVFSMMTKRDTVSWNTMIIAT 391
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KL 372
L K I++Y G + AR +FD + + +W ++I+ +G E +Q + R K
Sbjct: 13 LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72
Query: 373 GLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++P++ L+V AC S D + +H ++++ FG L+ + GKC
Sbjct: 73 CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIR--FGFCSDVLLGNALIDMYGKC-RCS 129
Query: 432 EAQQFIEQKLPFEPTAEFWEAL 453
E + + + +PF W ++
Sbjct: 130 EGARLVFEGMPFRDVIS-WTSM 150
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 214/400 (53%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELMD-----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EAI + D +G+K F ++ + + ++H +++ + D+
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ VI++Y KCG + +A +F+ RS W+ +I+G +G G + L LF QM++
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE 469
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+ P+ TF+++ +AC A +++ F M++ +GI P +HY +V + G+ G L +
Sbjct: 470 GISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDD 529
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
A FI + +P +P + W AL RIHG++++ A + + +LDP + +
Sbjct: 530 AFDFI-RNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYA 588
Query: 493 KRTAISILDGKSRLVEFRNP----------------TLYRDD-------------EKLKA 523
K +D LV +N Y + E L
Sbjct: 589 KVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDL 648
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L +++ YVPD +VL D++++ KEQ L HSERLAIA+G+I+TP RTPL I KNLRVC
Sbjct: 649 LAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVC 708
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCHNA K +S+I RE+IVRD+ RFHHFKDG CSCGD+W
Sbjct: 709 GDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-RGDL 312
Q G+V A+E+ D GV D +L + VH Y ++ GD+
Sbjct: 248 QGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDI 307
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK- 371
+ N +++MY K + A+R+FD M R SW+ +I GY NGL E + +++ M+K
Sbjct: 308 IAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKH 367
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
GL+P + TF++V A A+++ +H S+K+ + + Y+G ++ + KCG
Sbjct: 368 EGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL----DVYVGTCVIDLYAKCG 423
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L EA EQ P T W A+ + +HG
Sbjct: 424 KLDEAMLLFEQT-PRRSTGP-WNAVISGVGVHG 454
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHD 301
+P A L+ LC+ + EA+ L + GV DA ++ +C A +H
Sbjct: 135 VPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHL 194
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
Y ++ + +L + N +I++YGK G + + R+VFD M+ R + +W+ +I+G+ G
Sbjct: 195 YAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVAS 254
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSA---CG 389
+++F MR G+ P+ T L++ SA CG
Sbjct: 255 AVEMFCGMRDSGVSPDVLTLLSLASAIAQCG 285
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 295 NAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
A ++H L+ +RGD + ++ Y + G + DA R FD M R + +W+ M++G
Sbjct: 86 TAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGL 145
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISP 412
N E + LF +M G+ + T +V C D +H ++K G+
Sbjct: 146 CRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKH--GLDD 203
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ V GK G L E ++ +
Sbjct: 204 ELFVCNAMIDVYGKLGMLEEVRKVFD 229
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 212/394 (53%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK ++ + G++ D ++ C N E + H L S + + ++N +
Sbjct: 357 EEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL 416
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ +YGKCGS+ D+ R+F M+ SW +++GYA G +E L+LFE M G +P++
Sbjct: 417 VTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDK 476
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V SAC A +++ FESM E I P +HY ++ + + G L EA++FI
Sbjct: 477 VTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFI- 535
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
K+PF P A W +L + R H ++++ A E ++ L+P
Sbjct: 536 NKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWE 595
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPT---LYRDDEKLKALNQMKE 529
K + +K S + K+++ F NP +Y + EKL +M +
Sbjct: 596 EVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNY--KMVQ 653
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPD VLHD+D K + L +HSE+LAIA+GLI P P+R++KNLRVCGDCHNA
Sbjct: 654 EGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNA 713
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S+I RE++VRD RFH FKDG+CSCGD+W
Sbjct: 714 TKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EAI+L + ++ D F ++ CG + K+VH Y +++
Sbjct: 244 AMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT 303
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++ + + +++MY KC S+ A VF M +++ SW M+ GY NG +E +++F
Sbjct: 304 DYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIF 363
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLG 425
M+ G++P++ T +V S+C + ++EE A H ++ S G+ LV + G
Sbjct: 364 CDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVS--GLISFITVSNALVTLYG 421
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
KCG + ++ + + + + W AL YA+ A E + + A
Sbjct: 422 KCGSIEDSHRLFSEMSYVDEVS--WTALVSGYAQF-------GKANETLRLFESMLAHGF 472
Query: 485 KIPTPPPKKRTAISILDGKSR 505
K P K T I +L SR
Sbjct: 473 K-----PDKVTFIGVLSACSR 488
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V+ N +I +C + D+R++F M ++ SW MI G+ NGL E + LF +MR
Sbjct: 207 NVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMR 266
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
L+ ++ TF +V +ACG A++E
Sbjct: 267 LENLEMDQYTFGSVLTACGGVMALQEG 293
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C K + KK+H + +++ ++ L N ++ Y K +T ARRVFD M R++ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 347 HLMINGYADNGLGDEGLQLFEQM 369
+ +++ Y+ E ++F M
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAM 101
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 231/448 (51%), Gaps = 49/448 (10%)
Query: 208 GYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE 267
GY + N V P +I N+L D+ + A + Q G +A+E
Sbjct: 352 GYTKLGN----VKPAREIFNKLR------------DRDVVAWTAMIVGYVQNGLWNDALE 395
Query: 268 L----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
L +++G + ++ + + + E+ K++H +++ + N +I MY
Sbjct: 396 LFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYA 455
Query: 324 KCGSMTDARRVFDH-MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K G++ A+RVFD + + SW MI A +GLG E + LFE+M +G++P+ T++
Sbjct: 456 KTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYV 515
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
V SAC +E+ ++ M I P HY ++ + G+ G L EA FIE +P
Sbjct: 516 GVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIES-MP 574
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------------- 483
EP W +L +IH + DL A E ++ +DP +
Sbjct: 575 IEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQ 634
Query: 484 --KKIPTPPPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKAL----NQMKESTYVPD 535
K + +K IS + K+ + F + + DE K + ++K+ ++PD
Sbjct: 635 TRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPD 694
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T VLHD+++E KEQ L YHSE+LAIA+GL++TP T LRI+KNLRVC DCH+AIK +S+
Sbjct: 695 TESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISK 754
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+VGRE+IVRD RFHHFKDG CSC DYW
Sbjct: 755 LVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 41/220 (18%)
Query: 258 QEGKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q+G EA+ + K +K D ++ C N + K++H Y L++
Sbjct: 251 QQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG 310
Query: 313 VLNNKVIEMYGKCG-----------------------SMTD----------ARRVFDHMA 339
+ N +I MY K G S+ D AR +F+ +
Sbjct: 311 AVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLR 370
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
DR + +W MI GY NGL ++ L+LF M G +PN T A+ S S +E
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
IH ++K+ +P + L+ + K G++ A++ +
Sbjct: 431 IHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFD 468
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 35/186 (18%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA------- 339
C + + +K+H + ++ + + + ++ MY KCG A+ VFD M
Sbjct: 152 CAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTW 211
Query: 340 ------------------------DRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGL 374
DR + SW+ MI+GY+ G E L +F +M + L
Sbjct: 212 NALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSL 271
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P+ T ++ SAC + + + IH +++E S + L+ + K G + A
Sbjct: 272 KPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN--ALISMYAKSGGVEIA 329
Query: 434 QQFIEQ 439
+ +E
Sbjct: 330 RLIVEH 335
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 34/165 (20%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ VH ++ + + L N ++ Y K GS+ A VFD M +S SW+ +I+GYA
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 356 N-------------------------------GLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
GL D + +F +M + P++ T V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
S+C + ++ IH S + G+ L+ + KCG
Sbjct: 149 LSSCAANQTLDIGRKIH--SFVVKLGLGSCVPVATSLLNMYAKCG 191
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 212/400 (53%), Gaps = 36/400 (9%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
CQ G ++A+ E+ + + F ++ C N ++A ++H +ST D
Sbjct: 427 CQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDT 486
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N +I+ Y KCG + DA +VF+ + + + SW+ +I+ YA +G L+LF++M K
Sbjct: 487 IVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKS 546
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++ N+ TF+++ S CGS + + F SM + I P EHY +V +LG+ G L +
Sbjct: 547 DIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTD 606
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
A +FI +P P+ W AL + +H ++ L +A E ++D++P
Sbjct: 607 ALKFI-GDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYA 665
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE-- 529
K + KK +S ++ K + F + D ++ +N M E
Sbjct: 666 AAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGS--ADHPDMRIINAMLEWL 723
Query: 530 ------STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
YVPD VLHD+D+E K + L HSERLA+AYGL TP P+RI+KNLR C
Sbjct: 724 NLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSC 783
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH K++S+IV RE+IVRD RFHHF++G CSCGDYW
Sbjct: 784 LDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ + C N + E +++H+ ++ +L + N +++MY KC +M ++ +F + D +
Sbjct: 356 VLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDAN 415
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
SW+ +I GY +G ++ L +F +MR + + TF +V AC + +I+ A IH
Sbjct: 416 EVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KS F + T L+ KCG + +A + E + + + W ++ + +HG
Sbjct: 476 LIEKSTF--NNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVS--WNSIISAYALHG 531
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+ Y CG++ AR VFD + + +W M++ Y++N + + L F +MR G
Sbjct: 185 VGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTG 244
Query: 374 LQPNEQTFLAVFSA--CGSADAIEEAFIHFESMKSEFGISPGTEHYLG-LVGVLGKCGHL 430
+PN + A C S+ + + IH S+K+ + P H G L+ + KCG +
Sbjct: 245 FKPNPFVLTSALKAAVCLSSALLGKG-IHGCSVKTLYDTEP---HVGGALLDMYAKCGDI 300
Query: 431 FEAQQFIEQ 439
+A E
Sbjct: 301 EDAHAIFEM 309
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCG + DA +F+ + + W +I+ YA + ++ ++F +M +
Sbjct: 286 VGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSF 345
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG--TEHYLG--LVGVLGKC 427
+ PNE + V AC + AF+ I G +E ++G L+ + KC
Sbjct: 346 VVPNEFSLSGVLQACANI-----AFLELGEQIHNLAIKLGYESELFVGNALMDMYAKC 398
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D N ++ Y K G + ARR+FD M +R+ S+ ++ GYA G +E L+LF +++
Sbjct: 81 DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140
Query: 371 KLGLQPNEQTFLAVFSACGSADA 393
+ G + N + + DA
Sbjct: 141 REGHEVNHFVLTTILKVLVTMDA 163
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 211/390 (54%), Gaps = 31/390 (7%)
Query: 264 EAIEL---MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
EA+ L M + K D + + C + + +++H Y L++ D + N V++
Sbjct: 538 EALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVD 597
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG + AR +FD + ++ + SW +MI GY +G G E + F QMR G++P+E +
Sbjct: 598 MYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVS 657
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
F+++ AC + ++E + F MK E I P EHY +V +L + G+L +A +FI +
Sbjct: 658 FISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFI-KA 716
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADP---- 483
+P +P A W AL RIH D+ L + E + +L+P ++A+
Sbjct: 717 MPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEV 776
Query: 484 ----KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYV 533
KKI KK S ++ K ++ F P + + LK L ++MKE Y
Sbjct: 777 QKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYS 836
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
P T Y L + D+ KE AL HSE+LA+A+G+++ P +R+ KNLRVCGDCH K M
Sbjct: 837 PKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFM 896
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S+ RE+I+RD+ RFHHFKDG CSC YW
Sbjct: 897 SKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+G +K E+ +GV D ++ C ++ K VHDY ++ + + ++N +
Sbjct: 436 DGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNAL 495
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+MY KCGSM DA VF HM + + SW+ MI GY N L +E L LF +M++ +P+
Sbjct: 496 TDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDG 554
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T + AC S A+++ IH ++++ G S +V + KCG L A+
Sbjct: 555 TTVACILPACASLAALDKGREIHGYALRN--GYSEDKYVTNAVVDMYVKCGLLVLARSLF 612
Query: 438 EQ 439
+
Sbjct: 613 DM 614
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 253 LARLCQEGKVKEAIELM--DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ C+ G +K A+EL+ + D + ++ +LC K + ++V S +
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI 183
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D +L K++ MY KCG + + R VFD +++ + W+LMI+ Y+ +G E + LF+QM
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 243
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
+LG++PN TF ++ + +EE
Sbjct: 244 ELGIKPNSYTFSSILKCFAAVARVEEG 270
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS-TIRGDLVLNNKVIEMYGK 324
I+++ GV D + +F C N K +H Y +++ T+ ++ NN +++MY K
Sbjct: 341 IKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSK 400
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CG + A RVF+ M ++++ SW MI GY GL D ++LF++M+ G+ P+ ++
Sbjct: 401 CGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSI 460
Query: 385 FSACG 389
+AC
Sbjct: 461 LNACA 465
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++++ G+K ++ F ++ + E ++VH + + N +I Y
Sbjct: 241 QMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGR 300
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A+++FD + DR + SW+ MI+GY NGL D G+++F +M G+ + T + VF
Sbjct: 301 KVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFV 360
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC + + +H S+K+ + L+ + KCG L A + E+ E
Sbjct: 361 ACANIGTLLLGKVLHSYSIKAA-TLDREVRFNNTLLDMYSKCGDLNSAIRVFER--MDEK 417
Query: 446 TAEFWEAL 453
T W ++
Sbjct: 418 TVVSWTSM 425
>gi|297845892|ref|XP_002890827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336669|gb|EFH67086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 471
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 215/404 (53%), Gaps = 32/404 (7%)
Query: 246 LPPSVA------DLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYEN 295
+ PSVA LC +G +EA+E++D KG D L ++CG P+ E
Sbjct: 74 VSPSVAQNVTIETFDSLCNQGNWREAVEVLDYLENKGFAMDLIRLLRLAKICGEPEALEA 133
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ VH+ + D+ N +I+MY CGS+ A +VFD M R+ ++W +M+ + +
Sbjct: 134 ARVVHECIIALVSPCDVGSRNAIIKMYSCCGSVDHALKVFDEMPKRNSETWCVMMTCFVN 193
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
NG G+E + LF + ++ G +P+ + F V S C ++E + FE+M E+GI P E
Sbjct: 194 NGFGEEAINLFTRFKEEGNKPDGEIFNQVLSTCTLTGDLKEGSLQFEAMNREYGIIPSME 253
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY + + GHL EA F+E ++P EP+ + WE L N +R+HGD++L D EL+
Sbjct: 254 HYHSVTKMFATSGHLDEALNFVE-RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK 312
Query: 476 LDPSKADP---------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK 520
LD ++ D KK P+ + + R V+ +P + E
Sbjct: 313 LDATRLDKVSSAGLVVTKASDNVKKEPSNRSEPYWCYNF-----RPVDTSHPQMNIIYET 367
Query: 521 LKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L +L +QMKE YVPDTR+ I ++ + + E +A+ L+ + R+ + +I N
Sbjct: 368 LMSLRSQMKEMGYVPDTRFYRTLIMVMGNKEQVFGYREEIAVVESLLKSKPRSSITLITN 427
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+R+ GDCHN +K+MS I GR+L RD +R+H FK+G C C D W
Sbjct: 428 VRIVGDCHNMMKLMSVITGRDLFKRDAQRYHLFKNGVCRCNDRW 471
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 214/385 (55%), Gaps = 33/385 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G +A + ++F E K VH + ++S R + N +++MY K G
Sbjct: 256 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 315
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DAR+VFD + + + +W+ M+ +A GLG E + FE+MRK G+ N+ TFL++ +
Sbjct: 316 SMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E +F+ MK E+ + P +HY+ +V +LG+ G L +A FI K+P +PT
Sbjct: 376 ACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFI-FKMPMKPT 433
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + + A + + +LDP P K
Sbjct: 434 AAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKM 493
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK A S ++ ++ + F R+ +Y+ E++ Q++++ YVP+T
Sbjct: 494 MKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISI--QIRKAGYVPNTD 551
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YVL +D++ ++ L YHSE++A+A+ LI+ P +RI+KN+R+CGDCH+A + +S++
Sbjct: 552 YVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVF 611
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDY 622
RE++VRD RFHHF G CSCGDY
Sbjct: 612 KREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 246 LPPSVADLA--RLCQEGKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDY 302
L SVAD+ G +++ ++ +D + + A +++L C + ++A+ +H +
Sbjct: 30 LTASVADIPVPAAASTGIIRDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAH 89
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
S G + L+N +I +Y KCG++ DARRVFD M R M SW +I GYA N + DE
Sbjct: 90 LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEA 149
Query: 363 LQLFEQMRKLGLQPNEQTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYLG- 419
L L M + +PN TF ++ A G ++ I E IH ++K ++ + Y+G
Sbjct: 150 LGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ-IHALTVKYDW----HDDVYVGS 204
Query: 420 -LVGVLGKCGHLFEAQQFIEQ 439
L+ + +CG + A +Q
Sbjct: 205 ALLDMYARCGRMDMAIAVFDQ 225
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L + G +++H ++ D+ + + +++MY +CG M A VFD +
Sbjct: 168 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE 227
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
++ SW+ +I G+A G G+ L +F +M++ G + T+ +VFSA A+E+ +
Sbjct: 228 SKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKW 287
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
+H +KS +S ++G ++ + K G + +A++ ++
Sbjct: 288 VHAHMIKSGERLSA----FVGNTILDMYAKSGSMIDARKVFDR 326
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 216/394 (54%), Gaps = 38/394 (9%)
Query: 264 EAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+A+EL +GV+A+ + ++ C + E ++ HDY +++ + +L+L ++
Sbjct: 234 KAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALV 293
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +CGS+ A VF+ + +R SW +I G A +G + L+ F M + GL P +
Sbjct: 294 DMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDI 353
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
TF AV SAC +E F FESMK + + P EHY +V +LG+ G L EA++F+
Sbjct: 354 TFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFV-L 412
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------------ 481
K+P +P A W AL RIH + ++ + ++++ L P +
Sbjct: 413 KMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEK 472
Query: 482 --------DPKKIPTPPPKKRTAISILDG---KSRLVEFRNPTLYRDDEKL-KALNQMKE 529
K + PP ++ LDG K + + +P + + + + L +++
Sbjct: 473 VTEMRQMMKAKGLKKPPGH---SLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRA 529
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ Y +T L DID+E KE AL HSE+LAIA+G++ + A TP+RI+KNLRVC DCH A
Sbjct: 530 AGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTA 589
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S++ GRELIVRD RFHHF+ G CSC DYW
Sbjct: 590 TKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V +I + KCG + AR++FD M ++++ +W MI+GYA N D+ ++LF+ ++
Sbjct: 184 DVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQ 243
Query: 371 KLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G++ NE ++V S+C A+ E A + + GT LV + +C
Sbjct: 244 SQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGT----ALVDMYARC 299
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
G + +A E LP T W AL +HG
Sbjct: 300 GSIDKAVWVFED-LPERDTLS-WTALIAGLAMHG 331
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 231/448 (51%), Gaps = 49/448 (10%)
Query: 208 GYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE 267
GY + N V P +I N+L D+ + A + Q G +A+E
Sbjct: 352 GYTKLGN----VKPAREIFNKLR------------DRDVVAWTAMIVGYVQNGLWNDALE 395
Query: 268 L----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
L +++G + ++ + + + E+ K++H +++ + N +I MY
Sbjct: 396 LFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYA 455
Query: 324 KCGSMTDARRVFDH-MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K G++ A+RVFD + + SW MI A +GLG E + LFE+M +G++P+ T++
Sbjct: 456 KTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYV 515
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
V SAC +E+ ++ M I P HY ++ + G+ G L EA FIE +P
Sbjct: 516 GVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIES-MP 574
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------------- 483
EP W +L +IH + DL A E ++ +DP +
Sbjct: 575 IEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQ 634
Query: 484 --KKIPTPPPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKAL----NQMKESTYVPD 535
K + +K IS + K+ + F + + DE K + ++K+ ++PD
Sbjct: 635 TRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPD 694
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T VLHD+++E KEQ L YHSE+LAIA+GL++TP T LRI+KNLRVC DCH+AIK +S+
Sbjct: 695 TESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISK 754
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+VGRE+IVRD RFHHFKDG CSC DYW
Sbjct: 755 LVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 41/220 (18%)
Query: 258 QEGKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q+G EA+ + K +K D ++ C N + K++H Y L++
Sbjct: 251 QQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG 310
Query: 313 VLNNKVIEMYGKCG-----------------------SMTD----------ARRVFDHMA 339
+ N +I MY K G S+ D AR +F+ +
Sbjct: 311 AVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLR 370
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
DR + +W MI GY NGL ++ L+LF M G +PN T A+ S S +E
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
IH ++K+ +P + L+ + K G++ A++ +
Sbjct: 431 IHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFD 468
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 35/186 (18%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA------- 339
C + + +K+H + ++ + + + ++ MY KCG A+ VFD M
Sbjct: 152 CAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTW 211
Query: 340 ------------------------DRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGL 374
DR + SW+ MI+GY+ G E L +F +M + L
Sbjct: 212 NALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSL 271
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P+ T ++ SAC + + + IH +++E S + L+ + K G + A
Sbjct: 272 KPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN--ALISMYAKSGGVEIA 329
Query: 434 QQFIEQ 439
+ +E
Sbjct: 330 RLIVEH 335
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 34/165 (20%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ VH ++ + + L N ++ Y K GS+ A VFD M +S SW+ +I+GYA
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 356 N-------------------------------GLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
GL D + +F +M + P++ T V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
S+C + ++ IH S + G+ L+ + KCG
Sbjct: 149 LSSCAANQTLDIGRKIH--SFVVKLGLGSCVPVATSLLNMYAKCG 191
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 217/394 (55%), Gaps = 36/394 (9%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
K+A+EL + V D + ++ C + +VH + + + D+ L +
Sbjct: 185 KDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTAL 244
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCG + ++ RVF M + + +W MI G A++G G + L LF +M GLQPNE
Sbjct: 245 IDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNE 304
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V +C + + +F SM G++P +HY +V +LG+ GH+ EA+Q I
Sbjct: 305 VTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLI- 363
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPKKIP 487
+ +PFEP A W AL RI+ ++++ + A + LDP A
Sbjct: 364 RDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWE 423
Query: 488 TPPPKKRTA----ISILDGKSRLVEFRNPTLY----------RDDEKLKALNQM----KE 529
+RT I + G+S +E++N T++ R E K L +M ++
Sbjct: 424 GVAEMRRTLRRERIQRIPGRSS-IEWQN-TIHEFISGDRSHPRSKEIYKMLGEMMDRLRQ 481
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ Y P T VL DID+++KE+AL HSE+LA+A+GL++TPA + LRI KNLR C DCH+A
Sbjct: 482 AGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSA 541
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK+++ + R+LI+RD RFHHF +G+CSC DYW
Sbjct: 542 IKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 38/156 (24%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-------- 360
R D+ L N ++ Y G + +ARRVFD M +R M SW+ MI+GYA NG D
Sbjct: 103 RRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNG 162
Query: 361 -----------------------EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE- 396
+ L+L+ +MR + P+ T ++V SAC A+
Sbjct: 163 MDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVG 222
Query: 397 AFIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
A +H ES E + GT L+ + KCG +
Sbjct: 223 AEVHQFVESNGVELDVKLGT----ALIDMYAKCGDI 254
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 218/402 (54%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ EA+EL + GVK ++ L CGN + K H + L+ I
Sbjct: 358 IACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +I+MY KCG + +R FD + +++ W+ +I GYA +G E +++F+
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ G +P+ +F V SAC + EE +F SM S++GI EHY +V +L + G
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------ 482
L +A I +++P P A W AL + R+H ++ L + A E + +L+PS
Sbjct: 538 KLEQAYAMI-RRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLS 596
Query: 483 ---------------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
+ +K S ++ K+++ +P + + EKL
Sbjct: 597 NIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLD 656
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L+ +MK+ Y P+ +VL D++++ KEQ L HSE+LA+ +GL++TP PL++IKNLR
Sbjct: 657 KLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLR 716
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH IK +S RE+ VRD RFHHFK+G CSCGDYW
Sbjct: 717 ICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +G+ D + + C + A++VH S D + + ++ MY KC
Sbjct: 104 QMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCN 163
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA RVFD M + + SW ++ YA G DE +LF +M G+QPN ++ + +
Sbjct: 164 QIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIA 223
Query: 387 ACGSADAIEEAFIHFESM 404
+ EA + F M
Sbjct: 224 GFNHSGLYSEAVLMFLDM 241
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 44/229 (19%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G + D + ++ G+ + +H Y ++ + D +++ +I+MYGKC ++
Sbjct: 244 RGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSE 303
Query: 331 ARRVFDHM-------------------------------ADRSMD----SWHLMINGYAD 355
+VFD M D+ M+ SW MI +
Sbjct: 304 MSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQ 363
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
NG E L+LF +M+ G++PN T + ACG+ A+ H S++ GIS T
Sbjct: 364 NGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRR--GIS--T 419
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ Y+G L+ + KCG + +A + +P + + + YA +HG
Sbjct: 420 DVYVGSALIDMYAKCGRI-QASRICFDGIPTKNLVCWNAVIAGYA-MHG 466
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 8/191 (4%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++ H + L++ + D L K++ Y DA V D + + ++ S+ +I ++
Sbjct: 33 RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKF 92
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
L F QM GL P+ + + AC A++ A + S G +
Sbjct: 93 HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPAR-QVHGIASVSGFDSDSFV 151
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYARIHGDIDLEDHAEELMVD 475
LV + KC + +A + ++ FEP W AL YAR G + D A+ L +
Sbjct: 152 QSSLVHMYIKCNQIRDAHRVFDRM--FEPDVVSWSALVAAYAR-QGCV---DEAKRLFSE 205
Query: 476 LDPSKADPKKI 486
+ S P I
Sbjct: 206 MGDSGVQPNLI 216
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 221/405 (54%), Gaps = 38/405 (9%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ +EA+E ++ +GV A ++ C N E ++VH + +
Sbjct: 334 VAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGH 393
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R D L + +++MY K GS+ DA R+F +++ W M+ YA +G G L++F +
Sbjct: 394 RFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSR 453
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+ + PNE T +AV SAC + + + + +F M+ E+GI P TEHY +V + G+ G
Sbjct: 454 MKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAG 513
Query: 429 HLFEAQQFIEQ-KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------ 481
L +A+ FIE+ K+ E A W+ L + R+H I+ A E +V L+ A
Sbjct: 514 LLDKAKNFIEENKISHE--AVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLM 571
Query: 482 -----------DPKKIPTPPPKKR-------TAISILDGKSRLVEF-----RNPTLYRDD 518
D K+ + ++R + I + + R V R+ +Y
Sbjct: 572 SNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYL 631
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
EKL + ++KE Y T V+HDI++E +E +L +HSE+LAIA+G+ISTP T LRI K
Sbjct: 632 EKL--MERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFK 689
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH AIK ++R RE++VRD RFHHFKDG+CSC D+W
Sbjct: 690 NLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 256 LCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L + G EA+ + + V+A + + +F L G + +++H + + + D
Sbjct: 233 LMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEED 292
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQ 368
+ +++MY KCG M A +FD +D + D +W M+ GY NG +E L+ F +
Sbjct: 293 AFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRR 352
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEE 396
M + G+ + +V SAC +A +E+
Sbjct: 353 MLREGVPAGQFILTSVASACANAGMVEQ 380
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 225 IPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGK----VKEAIELMDK-GVKA-DAS 278
I L+N + P + LP + ++ +EG+ ++ E++D+ G A +A
Sbjct: 70 IARGLHNAHRVFDGTPT--RSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAF 127
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
+ C E+ +++H + L+S + D+VL N V++MY KCG ARR F M
Sbjct: 128 VLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAM 187
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
A + SW+++I +G QLF++
Sbjct: 188 AQKDATSWNIVIRACLQDGDLVGATQLFDE 217
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 209/379 (55%), Gaps = 29/379 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K D+ + C + E K++H Y L++ D + N ++++Y KCG + AR
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+FD + + + SW +MI GY +G G+E + F +MR G++P+E +F+++ AC +
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+E+ + F MK++F I P EHY +V +L + G+L +A +FIE LP P A W A
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET-LPIAPDATIWGA 606
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTPPP 491
L RI+ DI+L + E + +L+P K +KI
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGL 666
Query: 492 KKRTAISILDGKSRLVEFR--NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
+K S ++ K R+ F N + + +K+++L +MKE Y P T+Y L + D
Sbjct: 667 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 726
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+ KE AL HSE+LA+A+GL++ P R +R+ KNLRVCGDCH K MS+ RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D+ RFHHFKDG CSC +W
Sbjct: 787 DSNRFHHFKDGYCSCRGFW 805
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M G+ D + ++ C N K VH ++S+ + +N +++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A RVF+ M +R++ SW MI GY +G D + L +QM K G++ + ++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360
Query: 387 ACGSADAIE 395
AC + +++
Sbjct: 361 ACARSGSLD 369
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 56/243 (23%)
Query: 251 ADLARLCQEGKVKEAIEL--MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
A + CQ G ++ A+EL M + + + + ++ +LC K + KKVH +++
Sbjct: 71 AKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSV 130
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHM------------------------------ 338
D L K++ Y CG + + RRVFD M
Sbjct: 131 GVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 339 ---------------------ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
DR + SW+ MI+GY NGL + GL +++QM LG+ +
Sbjct: 191 MVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 250
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T ++V C ++ + +H ++KS F + L+ + KCG L A +
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSN--TLLDMYSKCGDLDGALRV 308
Query: 437 IEQ 439
E+
Sbjct: 309 FEK 311
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GVK D ++ C +N K VHDY + + +L + N +++MY KCGSM
Sbjct: 346 EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEG 405
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF M + + SW+ M+ L+P+ +T + AC S
Sbjct: 406 ANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILPACAS 444
Query: 391 ADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A+E IH +++ G S LV + KCG L A+ + +P + +
Sbjct: 445 LSALERGKEIHGYILRN--GYSSDRHVANALVDLYVKCGVLGLARLLFDM-IPSKDLVSW 501
Query: 450 WEALRNYARIHG 461
+ Y +HG
Sbjct: 502 TVMIAGYG-MHG 512
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 212/397 (53%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+++ G+ D C N E + H + S + +
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++N ++ +YGKCG + D+ R+F+ M R SW M++ YA G E +QLF++M + G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+P+ T V SAC A +E+ +F+ M SE+GI P HY ++ + + G L EA
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+FI +PF P A W L + R G++++ A E +++LDP
Sbjct: 528 MRFI-NGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 586
Query: 479 -SKADP-----KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-Q 526
K D + + KK S + K +L F +P L + KL+ LN +
Sbjct: 587 KGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNK 646
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+ ++ Y PDT +V HD+++ K + L YHSERLAIA+GLI P+ P+R+ KNLRVC DC
Sbjct: 647 IIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDC 706
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNA K +S + GRE++VRD RFH FKDG CSCGD+W
Sbjct: 707 HNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q G KEAIE + +G+K D F ++ CG K++H +++
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + + +I+MY KC + A+ VFD M +++ SW M+ GY G +E +++F
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF---GISPGTEHYL----G 419
M++ G+ P+ T SAC + ++EE S+F I+ G HY+
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEG--------SQFHGKAITSGLIHYVTVSNS 411
Query: 420 LVGVLGKCGHLFEAQQFIEQ 439
LV + GKCG + ++ + +
Sbjct: 412 LVTLYGKCGDIDDSTRLFNE 431
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V+ N ++ CG + DA ++F M S+ SW MI G A NGL E ++ F +M+
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH-YLG--LVGVLGKCG 428
GL+ ++ F +V ACG AI E IH +++ F +H Y+G L+ + KC
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF-----QDHIYVGSALIDMYCKCK 319
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
L A+ ++ + W A+ +G + A ++ +D+ S DP
Sbjct: 320 CLHYAKTVFDRMK--QKNVVSWTAM---VVGYGQTGRAEEAVKIFLDMQRSGIDP 369
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 207/379 (54%), Gaps = 31/379 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ DA F ++ CG+ +++H+Y + + +L+L N +I+MY +CG + DA+
Sbjct: 284 VEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAK 343
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVFD M R + SW +I+ Y G G + LF +M G P+ F+A+ SAC +
Sbjct: 344 RVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSG 403
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E I+F+ M ++ I+P EHY LV +LG+ G + EA I+Q +P EP W
Sbjct: 404 LLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQ-MPIEPNERVWAT 462
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDP-------------SKADPKKIPTP--PPKKRTAI 497
L + R+ ++D+ A + ++ L P +KA K T KR I
Sbjct: 463 LLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKI 522
Query: 498 SILDGKSRLVEFRNP--TLYRDD----------EKLKAL-NQMKESTYVPDTRYVLHDID 544
G S VE N T D E+L L +MKE YVP+T LHD++
Sbjct: 523 RKTPGISN-VELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVE 581
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+E KE L HSE+LAI + L++T +RI KNLRVCGDCH A K++S+IV RE+IVR
Sbjct: 582 EEDKEGHLAVHSEKLAIVFALLNTQ-EYQIRITKNLRVCGDCHIAAKLISKIVEREIIVR 640
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D RFHHFKDG CSCGDYW
Sbjct: 641 DTNRFHHFKDGVCSCGDYW 659
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L K++ Y CG R+VFD M+DR++ +++MI Y +N D+GL +F +M G
Sbjct: 55 LGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGG 114
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHL 430
+P+ T+ V AC ++ + IH + +K +F + G GL+ + GKCG L
Sbjct: 115 FRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGN----GLIAMYGKCGCL 170
Query: 431 FEAQQFIEQKL 441
FEA++ ++ +
Sbjct: 171 FEARRVFDEMI 181
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+++ G + D + + + C + +H L+ + +L + N +I MYGKCG
Sbjct: 109 EMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCG 168
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +ARRVFD M + + SW+ M+ GYA N D+ L++ +M G +P+ T ++
Sbjct: 169 CLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMP 228
Query: 387 ACGSADA-----IEEAFIHFE 402
A + + +E+ F++ E
Sbjct: 229 AVANTSSENVLYVEKIFVNLE 249
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
++F ++ +++ SW++MI Y N L + + L+ QM K ++P+ TF +V ACG
Sbjct: 241 VEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGD 300
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A+ E ++ + + P L+ + +CG L +A++ + ++ F A W
Sbjct: 301 LSALLLGRRIHEYVEKK-KLCPNLLLENSLIDMYARCGCLDDAKRVFD-RMKFRDVAS-W 357
Query: 451 EAL 453
+L
Sbjct: 358 TSL 360
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 216/399 (54%), Gaps = 37/399 (9%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ L +GV A+ + + C + +K H+Y +++ + +L+L
Sbjct: 229 CFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGT 288
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
V++MY +CG++ A VF+ + ++ + W +I G A +G ++ L F +M K G P
Sbjct: 289 AVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVP 348
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF AV +AC A +E FESMK + G+ P EHY +V +LG+ G L +A++F
Sbjct: 349 RDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKF 408
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADP 483
+ K+P +P A W AL RIH ++++ + ++++++ P ++A+
Sbjct: 409 V-LKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANK 467
Query: 484 -------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLK------AL 524
K + PP I DGK + T + + EK++ L
Sbjct: 468 WKDVTVMRQMMKDKGVRKPPGYSLIEI---DGKVHEFTIGDKT-HPEIEKIERIWEDIIL 523
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++K + YV +T + DID+E KE AL HSE+LAIAYG++ A TP+RI+KNLRVC
Sbjct: 524 PKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCE 583
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A K++S++ ELIVRD RFHHFK+G CSC DYW
Sbjct: 584 DCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
Q R D+V +I Y +CG AR +FD M +R++ +W MI+GYA N ++ +
Sbjct: 175 FQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAV 234
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGL 420
+ FE ++ G+ NE + V S+C A+ E+A + K + GT +
Sbjct: 235 ETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGT----AV 290
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
V + +CG++ +A EQ LP E W AL +HG
Sbjct: 291 VDMYARCGNVEKAVMVFEQ-LP-EKDVLCWTALIAGLAMHG 329
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D + N ++ MY G + AR VF M + SW MI GY G +LF++M
Sbjct: 151 DFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMP 210
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ N T+ + S + E+A FE++++E ++ T +VGV+ C HL
Sbjct: 211 ----ERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETV----MVGVISSCAHL 262
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 219/404 (54%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G +EA+++ + GV+A+ F + N + K++H +++
Sbjct: 587 ALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT 646
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +N +I +Y KCGS+ DA+R F M ++++ SW+ MI GY+ +G G E + LF
Sbjct: 647 GYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 706
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E+M++LGL PN TF+ V SAC + E +F SM E G+ P EHY+ +V +LG+
Sbjct: 707 EEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGR 766
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--- 483
L A++FIE+ +P EP A W L + +H +I++ + A +++L+P +
Sbjct: 767 AALLCCAREFIEE-MPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVL 825
Query: 484 ------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
+ + KK S ++ K+ + F +P + E
Sbjct: 826 LSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEY 885
Query: 521 LKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
+ LN+ E YV D +L+D++QE K+ HSE+LA+A+GL+S P+R+IKN
Sbjct: 886 IDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKN 945
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCHN IK +S+I R ++VRD RFHHF+ G CSC DYW
Sbjct: 946 LRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
++G++A+ + LFE C N +AKK+H +S G+ VL +++I++Y G +
Sbjct: 3 ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+A ++FD + ++ W+ +I+G L + L LF M + P+E TF +V AC
Sbjct: 63 NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
Query: 390 SADA---IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
A + E IH + + FG SP + L+ + K GH+ A+ E+ F
Sbjct: 123 GGKAPFQVTEQ-IHAKIIHHGFGSSPLVCN--PLIDLYSKNGHVDLAKLVFER--LFLKD 177
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP 489
+ W A+ + +G ED A L + S IPTP
Sbjct: 178 SVSWVAMISGLSQNGR---EDEAILLFCQMHKSAV----IPTP 213
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG---DLVLNNKVIEMYG 323
E+ ++G+++D F + C + +++H QS I G DL + N ++ +Y
Sbjct: 506 EMENQGIRSDNIGFSSAISACAGIQALNQGQQIHA---QSYISGYSEDLSIGNALVSLYA 562
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
+CG DA F+ + + SW+ +I+G+A +G +E LQ+F QM + G++ N TF +
Sbjct: 563 RCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGS 622
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ-QFIEQKLP 442
SA + I++ +M + G TE L+ + KCG + +A+ +F E +P
Sbjct: 623 AVSATANTANIKQG-KQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFE--MP 679
Query: 443 FEPTAEFWEALRNYARIHG 461
E W A+ HG
Sbjct: 680 -EKNVVSWNAMITGYSQHG 697
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 250 VADLARLCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA ++ L Q G+ EAI L + K+ F ++ C + ++ +++H + ++
Sbjct: 182 VAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK 241
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + + N ++ +Y + G++ A ++F M R S++ +I+G A G D LQL
Sbjct: 242 WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQL 301
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADA 393
FE+M+ ++P+ T ++ SAC S A
Sbjct: 302 FEKMQLDCMKPDCVTVASLLSACASVGA 329
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G A++L +K +K D +L C + K++H Y ++ +
Sbjct: 286 ISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGM 345
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL++ ++++Y KC + A F ++ W++M+ Y G E +F Q
Sbjct: 346 SSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQ 405
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF 408
M+ GL PN+ T+ ++ C S A++ IH + +KS F
Sbjct: 406 MQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGF 446
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ + V D S F ++ C K ++ +++H + ++ N +I++Y K G
Sbjct: 102 MITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNG 161
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A+ VF+ + + SW MI+G + NG DE + LF QM K + P F +V S
Sbjct: 162 HVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLS 221
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC + + ++G+S T LV + + G+L A+Q +
Sbjct: 222 ACTKIELFKLGE-QLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSK 273
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C + + +++H ++S + ++ + + +I+MY K G + AR + + +
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREE 479
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW MI GY + L E L+LF++M G++ + F + SAC A+ + IH
Sbjct: 480 DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH 539
Query: 401 FESMKSEFG--ISPGTEHYLGLVGVLGKCG 428
+S S + +S G LV + +CG
Sbjct: 540 AQSYISGYSEDLSIGN----ALVSLYARCG 565
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 214/398 (53%), Gaps = 44/398 (11%)
Query: 264 EAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+AIEL + +DA ++ C + K +H Y L+ + + N
Sbjct: 263 DAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNA 322
Query: 318 VIEMYGKCGSMTDARRVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY +CG + R +F + R + SW+ +I+GY +G G E +Q+FE+M +G P
Sbjct: 323 LMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSP 382
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF++V AC A + E + FESM E+G++P EHY +V +LG+ G L EA +
Sbjct: 383 SIITFISVLGACSHAGLVNEGKMLFESM-VEYGVTPRAEHYACMVDLLGRAGQLDEAMEL 441
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD-------------- 482
I + + EP+ + W AL RIHG ++ + A + DL+P A
Sbjct: 442 I-RSMHIEPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKL 500
Query: 483 -------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-----N 525
+ + +K T S ++ K +L F +NP + E+L+AL
Sbjct: 501 HNQVGVLKELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPV----EQLQALIGEFVA 556
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
QMK YVPDT VL+DI+ E KE+ L+ HSE+LA+A+GLI+T + +RI KNLR+C D
Sbjct: 557 QMKNQGYVPDTGIVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCED 616
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH+ K +S+ RE++VRD RFHHF+DG CSCGDYW
Sbjct: 617 CHSVTKFISKFTEREIVVRDVNRFHHFRDGVCSCGDYW 654
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK-- 371
+ +I+ Y K G + A VF M +R++ SW MI YA N + ++LF+ M
Sbjct: 216 VATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASD 275
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
L PN T ++V +AC +A+ +H ++ F + L+ + +CG L
Sbjct: 276 ADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLN--ALMAMYMRCGCL 333
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
E + I + + W +L + +HG
Sbjct: 334 -EVGRHIFKWIGHRRDVVSWNSLISGYGMHG 363
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
R D L+ ++IE Y G++ AR+VFD +++ W+ ++ A GDE L
Sbjct: 103 VFRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARL 162
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADA 393
M +LG+ + ++ AC + A
Sbjct: 163 ADMGRLGVPVDSYSYTHGLKACIAVSA 189
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 208/402 (51%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G+ EA++L GV+ ++ + N + + H + L+
Sbjct: 261 VACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGF 320
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +++MY KCG AR +FD M R++ SW+ MI GYA +G +QLF
Sbjct: 321 LHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCS 380
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+K +P+ TF V AC A EE +F M+ GISP EHY +V +LG+ G
Sbjct: 381 MQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSG 440
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA I + +PFEP + W +L R++G++ L + A E + L+P A
Sbjct: 441 KLDEAYDLINE-MPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLS 499
Query: 482 -----------------DPKKIPTPPPKKRTAISILDGKSRLVEFRN--PTLYRDDEKLK 522
+ K + K + I I + L+ N P + EKL
Sbjct: 500 NIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLN 559
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L +M + P +VLHD++++ K+ L HSE+LA+A GLIST TPLR+IKNLR
Sbjct: 560 QLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLR 619
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH A+K +S RE+ VRD RFHHFKDGKCSCGDYW
Sbjct: 620 ICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V + + +G DA+ G+ K K+VH Y +++ R D + +I+M
Sbjct: 138 VTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDM 197
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
YGKCG + RVF + + S + ++ G + N E L LF + G++ N ++
Sbjct: 198 YGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSW 257
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISP 412
++ + C EA F +M+S G+ P
Sbjct: 258 TSIVACCVQNGRDLEAVDLFRTMQS-IGVEP 287
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ +H + S + D + + ++ Y + G+ AR VFD M ++++ W +I GY+
Sbjct: 36 ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE--FGISPG 413
G + L EQMR G++PN T+ + S + +A M SE F + G
Sbjct: 96 RGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATG 155
Query: 414 TEHYLGLVG 422
L VG
Sbjct: 156 VSCALSAVG 164
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 216/406 (53%), Gaps = 46/406 (11%)
Query: 258 QEGKVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFL-----QS 306
Q G +A++L + V +A + C + K++H Y +S
Sbjct: 487 QYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYES 546
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
++ + N +I+MY KCG + AR VFD M R+ SW M++GY +G G E L +F
Sbjct: 547 SV---YFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIF 603
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M+K G P++ +FL + AC + +++ +F+ M+S++G+ +HY ++ +L +
Sbjct: 604 DKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLAR 663
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------ 480
G L +A + I Q++P EP+A W AL + R+H +++L ++A +V +
Sbjct: 664 SGRLDKAWKTI-QEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTL 722
Query: 481 -----------ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRD 517
D +I KKR S + GK F +P +Y
Sbjct: 723 ISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSL 782
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
E+L + ++K YVP+T + LHD+D E K L HSE+LA+AYGL++T P+RI
Sbjct: 783 LERL--IGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRIT 840
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH+A +S+IV E+IVRD+ RFHHFK+G CSCG YW
Sbjct: 841 KNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
++D + C + K K++H Y +++ D + N +I+ Y KCGSM DA
Sbjct: 256 RSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVN 315
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ M + + SW+ M+ GY +G +LF+ MRK + + T+ AV +
Sbjct: 316 VFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGY 375
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+EA F+ M +G P + + ++ +L C L Q +E
Sbjct: 376 GQEALDTFQQMI-LYGSEPNS---VTIISLLSACASLGALSQGME 416
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA++ ++ G + ++ +L C + + H Y L+
Sbjct: 365 AVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKK 424
Query: 307 TIRG------------DLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMING 352
+ DLV++N +I+MY KC S AR +F+ + +R++ +W +MI G
Sbjct: 425 CLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGG 484
Query: 353 YADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACG 389
YA G ++ L+LF +M + + PN T + AC
Sbjct: 485 YAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACA 523
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 24/194 (12%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG++ AI ++ G K D + CG Y + H + ++
Sbjct: 126 EEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVF 185
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMR 370
+ N ++ MY + GS+ DA VFD + + +D SW+ ++ + L LF +M
Sbjct: 186 VCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMT 245
Query: 371 KLGLQ--PNEQ----TFLAVFSACGSADAI-EEAFIHFESMKSEFGISPGT--EHYL--G 419
+ + NE+ + + + AC S A+ + IH + I GT + ++
Sbjct: 246 TIVHEKATNERSDIISIVNILPACASLKALPQTKEIH------SYAIRNGTFADAFVCNA 299
Query: 420 LVGVLGKCGHLFEA 433
L+ KCG + +A
Sbjct: 300 LIDTYAKCGSMKDA 313
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L V+ Y CG+ +DA V + + W+L++ + + G D + + +M + G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 374 LQPNEQTFLAVFSACG 389
+P+ T ACG
Sbjct: 145 TKPDHFTLPYALKACG 160
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 204/371 (54%), Gaps = 14/371 (3%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q GK KEAI+L D G+ + + C + +++HD+ +S ++
Sbjct: 222 QCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIR 281
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + DA R+FD+M +R++ SW MI G A +G ++ L LF +M G
Sbjct: 282 VCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTG 341
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TF+ + AC +E+ +F SM ++GI P EHY +V + + G L EA
Sbjct: 342 VKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEA 401
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKK 493
+FI +P P W AL ++H ++ L + A + LDP + +
Sbjct: 402 HEFI-MNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSN---- 456
Query: 494 RTAISILDGKSRLVEFRNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
I G+ V R L RD K L +MK YVP+T VL D++++ KE+ L
Sbjct: 457 ---IYAEAGRWEDVA-RVRKLMRDRGTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFL 512
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
HSE+LA+ +GLI T T +RI+KNLRVC DCH A+KI+S + RE++VRD RFH F
Sbjct: 513 YRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCF 572
Query: 613 KDGKCSCGDYW 623
K+G CSCGDYW
Sbjct: 573 KNGSCSCGDYW 583
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+C + L + C N K VH Y + ++ ++ L N ++ +Y CG + AR+VFD
Sbjct: 115 TCSFVL-KACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDK 173
Query: 338 MADRSMDSWHLMI-------------------------------NGYADNGLGDEGLQLF 366
M R + +W++MI GYA G E + LF
Sbjct: 174 MPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLF 233
Query: 367 EQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M GL PNE T +AV AC + + IH S +S G L+ +
Sbjct: 234 LEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRS--GYEKNIRVCNTLIDMYV 291
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG L +A + + E T W A+ HG
Sbjct: 292 KCGCLEDACRIFDNME--ERTVVSWSAMIAGLAAHG 325
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 216/400 (54%), Gaps = 36/400 (9%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + AIE+ + V D++ F C + ++V + + +
Sbjct: 187 QNGLAERAIEVYREMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVF 246
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + ++ MY +CG ++ AR FD + +R++ +W MI GY +G G E ++LF MR+ G
Sbjct: 247 LGSALVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREG 306
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN+ TF+AV +AC A + E F+SMK +G+ P EHY +V + G+ G L +A
Sbjct: 307 PTPNDVTFVAVLAACAHAGLVNEGRNAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDA 366
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK--------- 484
QFI +P EP E W A+ ++H + +L E ++ L+P +
Sbjct: 367 MQFICDSIPEEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYAL 426
Query: 485 --------KIPTPPPKKRTAISI------LDGKSRLVEFRNPT------LYRDDEKLKAL 524
K+ K+R I L G S L + +YR E+L +
Sbjct: 427 SGKMNHVEKVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYRYLEEL--I 484
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART-PLRIIKNLRVC 583
+++ ++ YVP+T VLH++++E +E AL YHSE+LA+AYGL+ + T P+R+IKNLR+C
Sbjct: 485 HRISDAGYVPETDSVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTAPIRVIKNLRIC 544
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH AIK MS + RE+IVRD RFHHFKDGKCSC +YW
Sbjct: 545 GDCHLAIKFMSSVESREIIVRDKHRFHHFKDGKCSCLEYW 584
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH + + D + ++ +Y KCG + AR++FD + DRS+ +W+ MI+GY NGL
Sbjct: 131 VHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGL 190
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---EAFIHFESMKSEFGISPGTE 415
+ ++++ +M+ + P+ TF+A SAC A A++ E S + + + G+
Sbjct: 191 AERAIEVYREMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGS- 249
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + +CG + +A+ + ++
Sbjct: 250 ---ALVNMYARCGLVSKARDWFDR 270
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 209/400 (52%), Gaps = 36/400 (9%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
CQ G ++A+ E+ V + F ++ C N ++ ++H +ST D
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDT 488
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N +I+ Y KCG + DA +VF+ + + SW+ +I+GYA +G + L+LF +M K
Sbjct: 489 IVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKS 548
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+PN+ TF+A+ S CGS + + F SM + I P +HY +V +LG+ G L +
Sbjct: 549 DTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLND 608
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
A +FI +P P+ W AL + +H ++ L + E +++++P
Sbjct: 609 ALKFIGD-IPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYA 667
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE-- 529
K + KK +S ++ K + F + D ++ +N M E
Sbjct: 668 AAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGS--ADHPDMRIINAMLEWL 725
Query: 530 ------STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
YVPD VLHD+D+E K + L HSERLA+AYGL TP P+RI+KNLR C
Sbjct: 726 NLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSC 785
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH K++S+IV RE++VRD RFHHF +G CSCGDYW
Sbjct: 786 LDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ + C N + + +++H+ ++ +L + N ++++Y KC +M ++ +F + D +
Sbjct: 358 VLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDAN 417
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
SW+ +I GY +G ++ L +F++MR + + TF +V AC + +I+ IH
Sbjct: 418 EVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHS 477
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KS F + T L+ KCG + +A + E + + + W A+ + +HG
Sbjct: 478 LIEKSTF--NNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVS--WNAIISGYALHG 533
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I+ Y CG+++ AR VFD + + +W M++ Y++N + ++ L F +MR G
Sbjct: 187 VGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAG 246
Query: 374 LQPNEQTFLAVFSA--CGSADAIEEAFIHFESMKSEFGISPGTEHYLG-LVGVLGKCGHL 430
+PN +V A C S+ + + IH ++K+ P H G L+ + KCG++
Sbjct: 247 AKPNPFVLTSVLKAAVCLSSAVLGKG-IHGCAVKTLCDTEP---HVGGALLDMYAKCGYI 302
Query: 431 FEAQQFIE 438
+A+ E
Sbjct: 303 EDARTVFE 310
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K +H +++ + + +++MY KCG + DAR VF+ + + W +I+ YA +
Sbjct: 271 KGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQS 330
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG--T 414
++ ++F +M + + PNE + V AC + AF+ I G +
Sbjct: 331 YQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANV-----AFLDLGQQIHNLVIKLGYES 385
Query: 415 EHYLG--LVGVLGKC 427
E ++G L+ V KC
Sbjct: 386 ELFVGNALMDVYAKC 400
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D N ++ +Y K G + ARR+FD M +R+M S+ ++ GYA G +E LF +++
Sbjct: 83 DTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142
Query: 371 KLGLQPNEQTFLAVFSACGSADA 393
+ G + N + + DA
Sbjct: 143 REGHEVNHFVLTTILKVLVAMDA 165
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 203/401 (50%), Gaps = 52/401 (12%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
E++ L D+ GV D T+ C A+ +DY +++ D++L +I
Sbjct: 184 ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMI 243
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCGS+ AR VFD M ++++ SW MI Y +G G + + LF M + PN
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
TF+++ AC A IEE F SM E + P +HY +V +LG+ G L EA + IE
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEA 363
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISI 499
+ E W AL RIH ++L + A +++L P P +S
Sbjct: 364 -MTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQN----------PGHYVLLSN 412
Query: 500 LDGKS----RLVEFRNPTLYRDDEK---------------------------------LK 522
+ K+ ++ +FR+ R +K +
Sbjct: 413 IYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMS 472
Query: 523 ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+ +++ + YVPDT +VL D+++E K++ L HSE+LAIA+GLI+ P P+RI KNLRV
Sbjct: 473 LIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRV 532
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH K++S I+ R +IVRD RFHHF DG CSCGDYW
Sbjct: 533 CGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ GV D + C + + + +HD L+ + D + +++MY KC
Sbjct: 91 ELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCI 150
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA+R+F+ M + + +W +MI YAD E L LF++MR+ G+ P++ + V +
Sbjct: 151 VVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVN 209
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
AC A+ A F + +++ F + GT ++ + KCG + A++ ++
Sbjct: 210 ACAKLGAMHRARFANDYIVRNGFSLDVILGT----AMIDMYAKCGSVESAREVFDRMK-- 263
Query: 444 EPTAEFWEALRNYARIHG 461
E W A+ HG
Sbjct: 264 EKNVISWSAMIAAYGYHG 281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++VH + + + DLV+ NK++ Y + ++ DA +FD + R +W +M+ G+A
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
G F ++ + G+ P+ T V C ++ IH +K ++
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGL----LSD 135
Query: 416 HYL--GLVGVLGKCGHLFEAQQFIEQKLP 442
H++ LV + KC + +AQ+ E+ L
Sbjct: 136 HFVCASLVDMYAKCIVVEDAQRLFERMLS 164
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 221/422 (52%), Gaps = 37/422 (8%)
Query: 234 NNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADA----SCFYTLFELCGN 289
N N+ GD V+ S+ + Q E + L + +AD S ++ C
Sbjct: 170 NVFNEMITGDLVVWNSI--IGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTG 227
Query: 290 PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHL 348
E ++VH + L+ DL+LNN +++MY KCGS+ DA +F M ++ + SW
Sbjct: 228 LALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWST 285
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
MI G A NG + L+LFE M+ G +PN T L V AC A + + + +F+SMK F
Sbjct: 286 MIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF 345
Query: 409 GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDH 468
GI PG EHY ++ +LG+ G L EA + I + + EP A W L R+H ++DL +
Sbjct: 346 GIDPGREHYGCIIDLLGRAGKLDEAVKLIHE-MNHEPDAVTWRILLGACRVHKNVDLAIY 404
Query: 469 AEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLV 507
A + ++ LDP+ A +K+ T KK S ++ ++
Sbjct: 405 AAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVH 464
Query: 508 EF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
F +P + +L L Q + YVPDT +VL D++ E E +L YHSE+LAI
Sbjct: 465 AFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAI 524
Query: 562 AYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGD 621
+GL+S P + + I KNLR+CGDCH K++S++ R +++RD R+HHF+ G CSCGD
Sbjct: 525 VFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGD 584
Query: 622 YW 623
YW
Sbjct: 585 YW 586
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 264 EAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
+A+E M + + ADA + L + C + A+ VH++ + L N +I MY
Sbjct: 2 KAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMY 61
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K G + +AR +FD M DR++ SW MI+ Y+++ L + L M + G++PN T+
Sbjct: 62 VKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYS 121
Query: 383 AVFSAC 388
+V AC
Sbjct: 122 SVLRAC 127
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I ++ +GV+ + + ++ C N +++H L+ + D+ + + +I+ Y K
Sbjct: 106 ILMLREGVRPNMYTYSSVLRACDG---LLNLRQLHGSILKVGLESDVFVRSALIDTYSKL 162
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G DA VF+ M + W+ +I G+A N GDE L L+++M++ ++ T +V
Sbjct: 163 GEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVL 222
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC +E +H +K + + L+ + KCG L +A + + E
Sbjct: 223 RACTGLALLELGRQVHVHVLKYDQDLILNN----ALLDMYCKCGSLEDANLLFTRMMT-E 277
Query: 445 PTAEFWEAL 453
W +
Sbjct: 278 KDVISWSTM 286
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 218/398 (54%), Gaps = 34/398 (8%)
Query: 258 QEGKVKEAIELMD-----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EAIE+ K + + + ++ + + K+H +++ + D+
Sbjct: 496 QNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDV 555
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I++YGKCG + DA +F + S +W+ +I+ + +G ++ L+LF +M
Sbjct: 556 FVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF+++ SAC + +EE F M+ E+GI P +HY +V +LG+ G+L
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEM 674
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------- 482
A FI + +P +P A W AL RIHG+I+L A + + ++D
Sbjct: 675 AYDFI-KDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYA 733
Query: 483 -------PKKIPTPP----PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN- 525
K+ + KK S ++ ++ F +P E+L+ L
Sbjct: 734 NVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+MK Y+PD +VL D++++ KE L HSERLAIA+G+ISTP ++P+RI KNLRVCGD
Sbjct: 794 KMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGD 853
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CHNA K +SRI RE++VRD+ RFHHFKDG CSCGDYW
Sbjct: 854 CHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGK 324
+++ G + D +L + + +N++ VH + ++ + D+V+ N V++MY K
Sbjct: 406 VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAK 465
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLA 383
G + A +VF+ + + + SW+ +I GYA NGL E +++++ M + + PN+ T+++
Sbjct: 466 LGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 525
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ A A+++ IH +K+ + L+ V GKCG L +A Q +P
Sbjct: 526 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQ-VP 582
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
E + W A+ + IHG HAE+ +
Sbjct: 583 QESSVT-WNAIISCHGIHG------HAEKTL 606
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ ++ D F + + CG + +K+H + + + ++ + +I MY + G
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
AR +FD M R M SW+ MI+G NG + L + ++MR G++ N T +++
Sbjct: 266 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV 325
Query: 388 CGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C I A IH +K EF + L+ + K G+L +A++ +Q
Sbjct: 326 CPQLGDISTAMLIHLYVIKHGLEFDLFVSN----ALINMYAKFGNLEDARKAFQQ 376
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ L Q G +A++++D+ G+K + ++ +C A +H Y ++
Sbjct: 286 AMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKH 345
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ DL ++N +I MY K G++ DAR+ F M + SW+ +I Y N F
Sbjct: 346 GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405
Query: 367 EQMRKLGLQPNEQTFLAVFS 386
+M+ G QP+ T +++ S
Sbjct: 406 VKMQLNGFQPDLLTLVSLAS 425
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AK +H + + + ++ +++ +Y G ++ +R FD + + + +W+ MI+ Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 356 NGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF----GI 410
NG E + F Q+ + ++P+ TF V ACG+ ++ IH + K F +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT--LVDGRKIHCWAFKLGFQWNVFV 252
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ H G G LF+ F
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPF 278
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 207/404 (51%), Gaps = 39/404 (9%)
Query: 253 LARLCQEGKVKEAIE-LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
LAR G A ++ GV+ D C + + VH ++ +R
Sbjct: 123 LARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPF 182
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ N ++ MY K G++ DAR VFD M R +W +I GYA NG G + L+++ M +
Sbjct: 183 RSVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVR 242
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G +P+ TF+ + AC A ++ HF SM +GI+PG +HY +V +LG+ G L
Sbjct: 243 SGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLD 302
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------- 483
EA + + E A W++L R+H + +L + A E++ LDP+ A P
Sbjct: 303 EAMDLLNRS-STELDATVWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLY 361
Query: 484 ------------------KKIPTPPPKKRTAISILDGKSRLVEF------RNPTLYRDDE 519
+ + P + +G + L R +YR E
Sbjct: 362 SRARRWGDVARIRALMKARGVTKEPGCSWVGV---NGITHLFHVEDRDHPRAAEIYRKVE 418
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ +++ YVPDT + L D E +++ L YHSERLA+A+GL++ PA P+R+ KN
Sbjct: 419 EMT--ERIRVEGYVPDTDWALQDEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKN 476
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVCGDCH AIK+++++ GRE+I+RD FHH KDG+CSCGDYW
Sbjct: 477 LRVCGDCHTAIKMVAKVYGREIILRDANCFHHMKDGECSCGDYW 520
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VFD M R + +W ++ G A G ++ + M G+QP+E A S+C ++ A
Sbjct: 104 VFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTA 163
Query: 394 IEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++ +H +++ G+ P LV + K G L +A+ + +P T +
Sbjct: 164 LDLGRSVHAAAVR--LGLRPFRSVENSLVSMYAKTGALRDARAVFD-AMPARCTITWTAL 220
Query: 453 LRNYA 457
+ YA
Sbjct: 221 IVGYA 225
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 204/382 (53%), Gaps = 34/382 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VK DA F T+ C + E K V + + D + V+ +YGKCG + +AR
Sbjct: 364 VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEAR 423
Query: 333 RVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R+FD + R + W+ MI YA G E L+LF +M G++P+ +F+++ AC
Sbjct: 424 RIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHT 483
Query: 392 DAIEEAFIHFESMKSEF-GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++ +F SM +E+ ++ +H+ + +LG+ G L EA++F+E KLP +P A W
Sbjct: 484 GLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLE-KLPVKPDAVAW 542
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
+L R H D+ ++ L+P A K +
Sbjct: 543 TSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQ 602
Query: 490 PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH 541
KK +S ++ + +F RN + + KL +QMKE YVPDT+ VLH
Sbjct: 603 GVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLH--SQMKECGYVPDTKMVLH 660
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
+D++ KE+ L HSERLAIA GLISTP TPLR+ KNLRVC DCH A K++S+I GR++
Sbjct: 661 FVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKI 720
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFH FKDGKCSC DYW
Sbjct: 721 VVRDPTRFHLFKDGKCSCQDYW 742
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 103/189 (54%), Gaps = 16/189 (8%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G V EA+ ++ G+KA S T+ C +P ++ + +H S +L++
Sbjct: 139 GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVA 198
Query: 316 NKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N V+ MYG+CG++ +AR+VFD M A R + SW++M++ Y N G + +QL+++M+
Sbjct: 199 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ--- 255
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHL 430
L+P++ T++++ SAC SA+ + +H + + E + G LV + KCG
Sbjct: 256 LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN----ALVSMYAKCGSH 311
Query: 431 FEAQQFIEQ 439
EA+ ++
Sbjct: 312 TEARAVFDK 320
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 263 KEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
K+AI+L + ++ D + +L C + + + +H + + ++++ N ++ M
Sbjct: 245 KDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 304
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-------L 374
Y KCGS T+AR VFD M RS+ SW +I+ Y L E LF+QM +L +
Sbjct: 305 YAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 364
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+P+ F+ + +AC A+E+ + E S G+S +V + GKCG + EA+
Sbjct: 365 KPDALAFVTILNACADVSALEQGKMVSEQAAS-CGLSSDKAVGTAVVNLYGKCGEIEEAR 423
Query: 435 QFIEQKLPFEPTAEFWEAL 453
+ + + P + W A+
Sbjct: 424 RIFDA-VCSRPDVQLWNAM 441
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 16/196 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A G+ KE + +++ GV+ DA F T CG+P+ + ++H + S +
Sbjct: 30 VAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRL 89
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFE 367
D ++N ++ MY KCGS++ A+RVF M R++ SW +M +A +G E L+ F
Sbjct: 90 EIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFR 149
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVG 422
M LG++ + + + SAC S +++ + I +SE ++ ++
Sbjct: 150 FMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVAN------AVMT 203
Query: 423 VLGKCGHLFEAQQFIE 438
+ G+CG + EA++ +
Sbjct: 204 MYGRCGAVEEARKVFD 219
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY C S DA+ FD + R++ SW ++ +A +G E L+ E+MR+ G++P+ T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+ +CG +++ + IH + S I P + L+ + KCG L A++ +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKR-VFA 117
Query: 440 KLPFEPTAEFWEALRNYARIHGDI 463
K+ W + +HG++
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNV 141
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 202/355 (56%), Gaps = 32/355 (9%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H +++ + D+ + +I+MYGKCG + DA +F + ++ W+ MI+ Y +G
Sbjct: 217 RIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHG 276
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G++ L+LF +M+ ++P+ TF+++ SAC + + +A F M+ E+GI P +HY
Sbjct: 277 DGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHY 336
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V + G+ G L A FI +K+P +P A W AL N RIHG+I+L HA E + ++D
Sbjct: 337 GCMVDLFGRAGELEMAFNFI-KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVD 395
Query: 478 PSKA--------------------DPKKIPTPPPKKRT---AISILDGKSRLVEFRNPT- 513
D + + ++ + IL+ K + N T
Sbjct: 396 SENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTH 455
Query: 514 -----LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+YR+ L + ++K YVPD +VL D++++ KE L+ HSERLAIAYG+IST
Sbjct: 456 PKCEEIYRELRDLTS--KIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIIST 513
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+TP+RI KNLRVCGDCH K +S I RE+IVRD+ RFHHFK G CSCGDYW
Sbjct: 514 SPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 126/244 (51%), Gaps = 18/244 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ CQ G EA+++ D+ GVK DA ++ +C + K +H Y ++
Sbjct: 65 AMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKH 124
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +L ++N +I MY K GS+ A++VF + + + SW+ +I GYA NGL E ++++
Sbjct: 125 GLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVY 183
Query: 367 EQMRK-LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVG 422
M + + PN+ T++++ A A+++ IH + +K+ ++ ++G L+
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN----CLYSDVFVGTCLID 239
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD 482
+ GKCG L +A Q +P + + W A+ + +HGD + A EL ++ +
Sbjct: 240 MYGKCGKLDDAISLFYQ-VPRKNSVP-WNAMISCYGVHGD---GEKALELFREMKAERVK 294
Query: 483 PKKI 486
P I
Sbjct: 295 PDHI 298
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ KK+H L+ D+ + ++ MY + G + DAR++FD M R SW+ MI+GY
Sbjct: 12 DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYC 71
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPG 413
NG E L + ++MR G++ + T +V C D + IH + I G
Sbjct: 72 QNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL------YVIKHG 125
Query: 414 TEHYL----GLVGVLGKCGHLFEAQQ 435
E L L+ + K G L AQ+
Sbjct: 126 LEFELFVSNALINMYAKFGSLGHAQK 151
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 223/402 (55%), Gaps = 40/402 (9%)
Query: 258 QEGKVKEAIELM----DKG--VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G EAIE+ ++G + A+ + ++ C K+H L++ + D
Sbjct: 427 QNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 486
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +MYGKCG + DA +F + + W+ +I + +G G++ + LF++M
Sbjct: 487 VFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 546
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++P+ TF+ + SAC + ++E FE M++++GI+P +HY +V + G+ G L
Sbjct: 547 EGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLE 606
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------- 481
A FI + +P +P A W AL + R+HG++DL A E + +++P
Sbjct: 607 IALNFI-KSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 665
Query: 482 ----------DPKKIPTPPPKKRT---AISILDGKSRLVEFRNPT------LYRDDEKLK 522
+ + I + ++T + +D K + N T +YR+ L
Sbjct: 666 ASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE---LT 722
Query: 523 ALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
AL++ +K YVPD R+VL D++ + KE L+ HSERLA+A+ LI+TPA+T +RI KNLR
Sbjct: 723 ALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLR 782
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCH+ K +S+I RE+IVRD+ RFHHFK+G CSCGDYW
Sbjct: 783 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A ++ CQ G KEA+ L D D+ +L C + +H Y ++ +
Sbjct: 221 AMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L ++NK+I++Y + GS+ D ++VFD M R + SW+ +I Y N + LF++MR
Sbjct: 281 ELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMR 340
Query: 371 KLGLQPNEQTFLAVFS 386
+QP+ T +++ S
Sbjct: 341 LSRIQPDCLTLISLAS 356
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ + N V+ MY K G + AR VF+ + ++ + SW+ +I+GYA NG E ++++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 371 KLG--LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSE--FGISPGTEHYLGLVGVLG 425
+ G + N+ T+++V AC A A+ + +H +K+ + GT L + G
Sbjct: 443 EEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTS----LADMYG 498
Query: 426 KCGHLFEAQQFIEQ 439
KCG L +A Q
Sbjct: 499 KCGRLDDALSLFYQ 512
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+TLF C N ++AK +H + S ++ ++ K++ +Y G++ AR FDH+ +
Sbjct: 58 HTLFRYCTN---LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHN 114
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQ-MRKLGLQPNEQTFLAVFSAC 388
R + +W+LMI+GY G E ++ F M GLQP+ +TF +V AC
Sbjct: 115 RDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC 163
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
++ ++ G++ D F ++ + C N + K+H L+ D+ + +I +Y +
Sbjct: 141 SLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGFMWDVYVAASLIHLYCR 197
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
G++ +AR +FD M R M SW+ MI+GY +G E L L + +R + + T +++
Sbjct: 198 YGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSL 253
Query: 385 FSACGSA-DAIEEAFIHFESMK----SEFGISPGTEHYLGLVGVLGKCGHLFE 432
SAC A D IH S+K SE +S G L C +F+
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFD 306
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 205/367 (55%), Gaps = 33/367 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + K +H+Y + + +N +I+M+ KCGS+TDA +F+ M R +W
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI +A +G G + + +FE+M++ G++P+E TFL + AC A +E+ +F SM
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+GI+PG +HY +V +LG+ GHL EA F++ KL + T W L + HG++++
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVD-KLEIKATPILWRTLLSACSTHGNVEMA 419
Query: 467 DHAEELMVDLDPSKADPKKIPT----------------PPPKKRTAISILDGKSRLVEFR 510
E + +LD + I + K R + + S VE
Sbjct: 420 KRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSS--VEVN 477
Query: 511 NPT--LYRDD-------EKLKALNQM----KESTYVPDTRYVLH-DIDQEAKEQALLYHS 556
N + D E +AL+++ K YVPDT V H D+++E KE L YHS
Sbjct: 478 NVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHS 537
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
E+LA+A+GL++TP T +R+ KNLR+CGDCHNA K++S I GR++++RD +RFH F+DGK
Sbjct: 538 EKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGK 597
Query: 617 CSCGDYW 623
CSCGD+W
Sbjct: 598 CSCGDFW 604
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ G+ D F +L + C + K +H + ++ + ++ + +I MY +C
Sbjct: 120 ELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECN 179
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M AR VFD M + S++ +I GYA + +E L LF +++ ++P + T L+V
Sbjct: 180 DMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIM 239
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKL 441
+C A++ +IH E+ G + Y+ L+ + KCG L +A E
Sbjct: 240 SCALLGALDLGKWIH------EYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMR 293
Query: 442 PFEPTAEFWEALRNYARIHGD 462
+ A W A+ HGD
Sbjct: 294 VRDTQA--WSAMIVAFATHGD 312
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYG---KCGSMTDARRVFDHMADRSMDSWHLMINGY 353
K++ Y +++ ++ D+ + K+I M A +FD + D+ + +++M GY
Sbjct: 46 KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGY 105
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
A + LF ++ GL P++ TF ++ AC S+ A+ E
Sbjct: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREG 149
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 219/398 (55%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + +A+ L + +G K + + + + ++ K++H ++ +
Sbjct: 389 QNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVS 448
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ N +I MY + GS+ DAR++F+H+ R +W MI A +GLG+E ++LFE+M ++
Sbjct: 449 VGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRI 508
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
L+P+ T++ V SAC +E+ +F MK+ I P + HY ++ +LG+ G L E
Sbjct: 509 NLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEE 568
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
A FI + +P EP W +L + R+H +DL A E ++ +DP+ +
Sbjct: 569 AYNFI-RNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLS 627
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEF-RNPTLYRDDEKL-----KALN 525
K + KK S + K+++ F L+ + + K
Sbjct: 628 ACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWK 687
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K+ ++PDT VLHD++QE KEQ L +HSE+LAIA+ LI+TP T +RI+KNLRVC D
Sbjct: 688 EIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCND 747
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH+AI+ +S +V RE+IVRD RFHHFKDG CSC DYW
Sbjct: 748 CHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 37/240 (15%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+ V + ++ G+ F + C + + KKVH + ++ G + + N +
Sbjct: 127 KSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSL 186
Query: 319 IEMYGKCGSMTDARRV-------------------------------FDHMADRSMDSWH 347
+ MY KCG A+ V FD M D + SW+
Sbjct: 187 LNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWN 246
Query: 348 LMINGYADNGLGDEGLQLFEQMRK-LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMK 405
+I GY G L+ F M K L+P++ T +V SAC + ++++ IH ++
Sbjct: 247 SIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVR 306
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE-QKLPFEPTAEFWEALRNYARIHGDID 464
++ I+ + L+ + K G + A + +E P F L Y +I GDID
Sbjct: 307 ADVDIAGAVGN--ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKI-GDID 363
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 53/275 (19%)
Query: 243 DQVLPPSVAD----LARLCQEGKVKEAIE-----LMDKGVKADASCFYTLFELCGNPKWY 293
DQ+ P + + C +G A+E L +K D ++ C N +
Sbjct: 235 DQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESL 294
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG-----------------------SMTD 330
+ K++H + +++ + + N +I MY K G S+ D
Sbjct: 295 KLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLD 354
Query: 331 ----------ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
AR +FD + R + +W MI GYA NGL + L LF M + G +PN T
Sbjct: 355 GYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYT 414
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSE--FGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
AV S S +++ +H +++ E +S G L+ + + G + +A++
Sbjct: 415 LAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGN----ALITMYSRSGSIKDARKIF 470
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
+ T + + + A+ HG L + A EL
Sbjct: 471 NHICSYRDTLTWTSMILSLAQ-HG---LGNEAIEL 501
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ + K G++ ARRVFD + SW MI GY GL + F +M G+
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P + TF V ++C +A A++ +H F + G+ P L+ + KCG A
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN---SLLNMYAKCGDSVMA 199
Query: 434 QQFIEQ 439
+ ++
Sbjct: 200 KVVFDR 205
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 195/339 (57%), Gaps = 32/339 (9%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + AR VFD M R+ SW M++GY +G G E L +F++M+K G
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P++ +FL + AC + +++ +F+ M+ ++ + EHY ++ +L +CG L +A
Sbjct: 611 FVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKA 670
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------AD 482
+ I Q++P EP+A W AL + R+H +++L ++A +V++ A+
Sbjct: 671 WKTI-QEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYAN 729
Query: 483 PKK----------IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
++ + KKR S + GK F +P +Y E+L +
Sbjct: 730 ARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL--I 787
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++K YVP+T + LHD+D E K L HSE+LA+AYGL++T P+RI KNLRVCG
Sbjct: 788 GRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCG 847
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+A +S+IV E+IVRD+ RFHHFK+G CSCG YW
Sbjct: 848 DCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
++D + C + K K++H Y +++ D + N +I+ Y KCGSM DA +
Sbjct: 256 RSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVK 315
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ M + + SW+ M+ GY +G +LFE MRK + + T+ AV +
Sbjct: 316 VFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGC 375
Query: 394 IEEAFIHFESMKSEFGISPGTE-HYLGLVGVLGKCGHLFEAQQFIE 438
+EA F+ M I G+E + + ++ +L C L Q +E
Sbjct: 376 SQEALDAFQQM-----ILDGSEPNSVTIISLLSACASLGALSQGME 416
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA++ ++ G + ++ +L C + ++H Y L+
Sbjct: 365 AVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKK 424
Query: 307 TIRG------------DLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMING 352
+ DL++ N +I+MY KC S AR +FD + +R++ +W +MI G
Sbjct: 425 CLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGG 484
Query: 353 YADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAI 394
YA G ++ L++F +M + + PN T + AC A+
Sbjct: 485 YAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAAL 528
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG + AI ++ G K D + CG Y + +H + ++
Sbjct: 126 KEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVF 185
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMR 370
+ N ++ MY +CGS+ DA VFD + + +D SW+ ++ + L+LF +M
Sbjct: 186 VCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS 245
Query: 371 KLGLQ--PNEQ----TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT--EHYL--G 419
+ + NE+ + + + AC S A+ + IH + I GT + ++
Sbjct: 246 MIVHEKATNERSDIISIVNILPACASLKALPQIKEIH------SYAIRNGTFADAFVCNA 299
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
L+ KCG + +A + + + F+ W A+
Sbjct: 300 LIDTYAKCGSMNDAVK-VFNVMEFKDVVS-WNAM 331
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 221/442 (50%), Gaps = 46/442 (10%)
Query: 224 QIPNQLNNVPNNMNQCPAGDQVLPPSV--------ADLARLCQEGKVKEAIELMDKGVKA 275
+ L + + +N+ Q+ S A ++ Q G + AI L + +
Sbjct: 341 SVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTT 400
Query: 276 DAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
+ + ++ C K VH + ++ ++ +I+MY KCG++++A
Sbjct: 401 EFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEA 460
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
++FD ++++ +W+ MI GY +G GDE L+LF +M LG QP+ TFL+V AC A
Sbjct: 461 SQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHA 520
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ E F +M +++ I P EHY +V +LG+ G L +A +FI +K+P EP W
Sbjct: 521 GLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFI-RKMPVEPGPAVWG 579
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPPKKRTA 496
L IH D +L A E + +LDP PK K+
Sbjct: 580 TLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRN 639
Query: 497 ISILDGKSRLVEF---------------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH 541
+S G + L+E + ++Y E+L +M+E Y +T LH
Sbjct: 640 LSKTPGCT-LIEVNGTPHVFVCGDRSHSQTTSIYAKLEELT--GKMREMGYQSETVTALH 696
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
D+++E KE HSE+LAIA+GLI+T T +RIIKNLRVC DCH A K +S+I R +
Sbjct: 697 DVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVI 756
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFHHFKDG CSCGDYW
Sbjct: 757 VVRDANRFHHFKDGICSCGDYW 778
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + +L + + ++++Y K + AR+VFD M DR W+ MI G N
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
D+ +Q+F+ M G++ + T V A ++ + + + + G
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVG-MGIQCLALKLGFHFDDYVLT 243
Query: 419 GLVGVLGKC 427
GL+ V KC
Sbjct: 244 GLISVFSKC 252
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 197/355 (55%), Gaps = 31/355 (8%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++ + ++ + +++MY KCG+M AR VFD M ++ + SW MI GYA NGL
Sbjct: 143 IHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGL 202
Query: 359 GDEGLQLFEQMR---KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
E + LF QM+ KLG++P+ TF+ + C A ++E +F SM F ++P E
Sbjct: 203 PKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIE 262
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G L EA Q I + +P E A W AL RIH D L + A + +++
Sbjct: 263 HYGCMVDLLGRAGLLDEAHQLI-RNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 321
Query: 476 LDPSKA--------------------------DPKKIPTPPPKKRTAISILDGKSRLVEF 509
L+P + + K+I PP + + + + +
Sbjct: 322 LEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDK 381
Query: 510 RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P + KL L + MK + YVP T +VL DI++E KE L HSE+LAIA+GLIS
Sbjct: 382 YHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISA 441
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+R++KNLRVCGDCH AIK++S I GRE+ VRDN RFH F++G CSC DYW
Sbjct: 442 TPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 309 RGDLVLNNKVIEMYGKCG-SMTDA---RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
R L +N ++ M +C +D R +F + ++ W+ MI G N D+ ++
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS-------EFGISPGTEH 416
+ MR G PN TF V AC ++ IH +K E G+
Sbjct: 99 FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFV 158
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
LV + KCG++ +A+ + +P + + ++ YA
Sbjct: 159 GTSLVDMYAKCGNMEKARSVFD-GMPEKDIVSWGAMIQGYA 198
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 224/423 (52%), Gaps = 42/423 (9%)
Query: 239 CPAGDQVLPPSVADLARLC----QEGKVKEAIELM----DKGVKADASCFYTLFELCGNP 290
C D++ P A + + Q G+ E ++L+ + V +DA ++ +CG+
Sbjct: 122 CVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDL 181
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
+ K VH Y + ++ D+VL ++ MY KCGS+ +A +VF MA+R + +W +MI
Sbjct: 182 GVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMI 241
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
GYA +G ++ LQLF+ M++ + PN TF +V SA + +E+ FE+M +E+ I
Sbjct: 242 AGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKI 301
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
+P +HY +V + + G + A +FI Q +P EP W L + HG L +H
Sbjct: 302 TPQIKHYGCMVDLFCRAGMVGHAHKFI-QTMPIEPNVVLWRTLLGACKTHGYKGLGEHIS 360
Query: 471 ELMVDLDPSKAD---------------------PKKIPTPPPKKR-----TAISILDGKS 504
++ LDPS + + PKK+ I+ + K
Sbjct: 361 RKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKF 420
Query: 505 RLVEFRNPTLYRDDEKLKALNQM----KESTYVPDTRYVLHDIDQEAKEQALLYHSERLA 560
+ E +P + ++ L+QM K+ +V T VLHDID+E KE AL HSERLA
Sbjct: 421 IMGEESHP---KREKIYGMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLA 477
Query: 561 IAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
IAYGL+ TP +P+RI+KNLR C DCH IK++S + RE+I+RD FHHF++ CSC
Sbjct: 478 IAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYNREIILRDRVCFHHFRERGCSCN 537
Query: 621 DYW 623
DYW
Sbjct: 538 DYW 540
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G +A C L LC +++H +++ + + L N +I++Y CG M A
Sbjct: 71 GFVLNACC--KLLRLC-------EGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYA 121
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+FD M + SW M++GY+ NG E L+L +M+ + + T +V CG
Sbjct: 122 CVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDL 181
Query: 392 DAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
++ ++I E +K + + GT LVG+ KCG L A + + + T
Sbjct: 182 GVLDLGKWVHSYIDKEGVKID--VVLGT----ALVGMYSKCGSLDNALKVFQGMAERDVT 235
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W + IHG ++ A +L + SK P +
Sbjct: 236 T--WSIMIAGYAIHGH---DEKALQLFDAMKRSKIIPNCV 270
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 213/404 (52%), Gaps = 42/404 (10%)
Query: 255 RLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
R ++G+ KE +LM GV+ + F + C + + K+VH Y +
Sbjct: 271 RCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDP 330
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+ ++ +Y KCG+ ARRVF+ M + SW +I GYA NG D LQ FE +
Sbjct: 331 FSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLL 390
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G +P+E TF+ V SAC A ++ +F S+K + G+ +HY ++ +L + G
Sbjct: 391 RSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRF 450
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------ 478
EA+ I+ +P +P W +L RIHG+I+L + A + + +L+P
Sbjct: 451 KEAENIIDN-MPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNI 509
Query: 479 --------------SKADPKKIPTPPPK-----KRTAISILDGKSRLVEFRNPTLYRDDE 519
+ D + I P K KR L G + +P + E
Sbjct: 510 YANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTS-----HPKISDIHE 564
Query: 520 KLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
L L++ MKE YV DT +VLHD+++E KEQ + YHSE+LA+A+G+IST TP+++ K
Sbjct: 565 YLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFK 624
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
NLR C DCHNA+K +S+IV R++IVRD+ RFH F DG CSC DY
Sbjct: 625 NLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y ++S + D V+ ++++YGKCGS+ +AR +FD MAD+ + SW MI+ +
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G EG LF + G++PNE TF V +AC A E+ + G P +
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADL-AAEQMGKEVHGYMTRVGYDPFSF 333
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
LV V KCG+ A++ Q +P P W +L
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQ-MP-RPDLVSWTSL 369
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 68/114 (59%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
CQ+ ++KEA++ + + + + TL C + E K+VH + S +V++
Sbjct: 42 FCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVIS 101
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
N++I MY KCGS+ DA+ +FD + + + SW+ MI+GYA+ G ++ +LF++M
Sbjct: 102 NRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM 155
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 199/372 (53%), Gaps = 28/372 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
TL C K++H Y ++ + D+ + + +++MY KCG + +R VFD +
Sbjct: 507 LMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP 566
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF 398
R++ +W+++I Y +GLGDE + LF++M G PNE TF+A +AC + ++
Sbjct: 567 RRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGL 626
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
F M+ + G+ P + + +V VLG+ G L EA I P E W +L R
Sbjct: 627 ELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACR 686
Query: 459 IHGDIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPPKKRTAISI---- 499
+H +++L + A E + +L+P +A K + +R ++
Sbjct: 687 LHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGC 746
Query: 500 ----LDGK-SRLV--EFRNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQA 551
LDG R + E +P + AL +M+ Y PDT VLHD+D++ K
Sbjct: 747 SWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAM 806
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
L YHSE+LAIA+GL+ P +R+ KNLRVC DCH A K MS++VGR++++RD +RFHH
Sbjct: 807 LRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHH 866
Query: 612 FKDGKCSCGDYW 623
F+DG CSCGDYW
Sbjct: 867 FRDGSCSCGDYW 878
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAK 297
GD V ++ L L Q G+ EA+E++ GV+ D F + C + +
Sbjct: 245 GDVVTWNTMISL--LVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGR 302
Query: 298 KVHDYFLQSTIRGDLVLNNKV----IEMYGKCGSMTDARRVFDHMAD--RSMDSWHLMIN 351
++H L+ DL N+ V ++MY + ARRVFD + + R + W+ MI
Sbjct: 303 EMHAVVLKDA---DLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMIC 359
Query: 352 GYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
GYA G+ +E L+LF +M + G P+E T V AC A E F E+M
Sbjct: 360 GYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPAC----ARSEGFAGKEAM 409
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 258 QEGKVKEAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G +EA+EL + ++A+A C + C + + + +H Y ++ + G+
Sbjct: 363 QAGMDEEALELFSR-MEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGN 421
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ N +++MY + G M ARR+F + R + SW+ +I G G E QL +M+
Sbjct: 422 RFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQL 481
Query: 372 LG----------------LQPNEQTFLAVFSACGSADA-IEEAFIHFESMKS--EFGISP 412
PN T + + C + A IH +++ E I+
Sbjct: 482 PSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAV 541
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
G+ LV + KCG L A + + +LP
Sbjct: 542 GS----ALVDMYAKCGCL-AASRAVFDRLP 566
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 212/401 (52%), Gaps = 37/401 (9%)
Query: 257 CQEG-KVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C E ++ EA+EL + G+ + ++ C + K++H S
Sbjct: 52 CTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSS 111
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
++ +++MY KCGS+ + +VF M R+ SW MI A +G GDE L+LF++M
Sbjct: 112 VLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNL 171
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G+ + TF+ V AC A I+E+ F SM ++ I+P HY + +G+ G L
Sbjct: 172 EGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQ 231
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------- 483
+A++ I +PF P W+ L N RIH + EL+ L P +
Sbjct: 232 DAEELI-HSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVY 290
Query: 484 -------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL---K 522
K + KK S ++ K+++ EF +P+ RD+ L K
Sbjct: 291 AATERYGDQMRVRKSMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPS--RDEILLELEK 348
Query: 523 ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+M+E+ YVP+T+ VLH +++E KEQ + HSE+LAIA+GLI+TP TPL I+KNLRV
Sbjct: 349 LGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRV 408
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH A K++++I+ R ++VRD RFHHF+DG+CSC DYW
Sbjct: 409 CSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 449
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+L N ++ MY +CGS+ +AR+VFD M SW MI +N E L+LF +M
Sbjct: 12 ILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRMNLE 71
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G+ P T +V +AC + A++ IH S F S + L+ + KCG L
Sbjct: 72 GIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQ--TALLDMYAKCGSL 128
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 208/397 (52%), Gaps = 40/397 (10%)
Query: 262 VKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+KEA+++ G+ D + + C + ++ H Y + D ++ N
Sbjct: 254 MKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNA 313
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I+MY KCG ++ AR VF+ M + SW+ MI GY +GLG E L LF + LGL+P+
Sbjct: 314 LIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPD 373
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TF+ + S+C + + E + F++M +F I P EH + +V +LG+ G + EA FI
Sbjct: 374 DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 433
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------------- 481
+ +PFEP W AL + RIH +I+L + + + L P
Sbjct: 434 -RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRW 492
Query: 482 -------------DPKKIPTPPPKKRTAI--SILDGKSRLVEFRNPTLYRDDEKLKALNQ 526
KKIP + I + + G ++ + R E+L L +
Sbjct: 493 DDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQ--INRKLEEL--LVE 548
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
MK Y + +V D+++E KEQ LLYHSE+LAIA+G+++ A P+ + KNLRVCGDC
Sbjct: 549 MKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDC 608
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H AIK M+ I RE+ VRD RFHHFK+G C+CGD+W
Sbjct: 609 HTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L E C K AKK+H +FL++T D + +K+ +Y C + ARR+FD + + S
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ W+ +I YA NG D + L+ M LG++PN+ T+ V AC AIE+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG-VEIH 132
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S FG+ LV KCG L EAQ+ + A W A+ ++G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA--WNAMIAGCSLYG- 189
Query: 463 IDLEDHAEELMVDLDPSKADP 483
L D A +L++ + P
Sbjct: 190 --LCDDAVQLIMQMQEEGICP 208
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+G + ++ GV+ + + + + C E+ ++H + + D+ + +
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTAL 150
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++ Y KCG + +A+R+F M+ R + +W+ MI G + GL D+ +QL QM++ G+ PN
Sbjct: 151 VDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS 210
Query: 379 QTFLAVFSAC----------------------------GSADAIEEAFIHFESMKSEFGI 410
T + V C ++D ++EA F M+ GI
Sbjct: 211 STIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLS-GI 269
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQ 435
P L GVL C HL Q
Sbjct: 270 DPDLTTML---GVLPACSHLAALQH 291
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
++ ++ + C + AR++FD M R+ SW MI GY + E L +F M+ G+
Sbjct: 210 SSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGI 269
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+ T L V AC A++ F + G + T L+ + KCG + A+
Sbjct: 270 DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAR 328
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHG 461
+ + + + W A+ IHG
Sbjct: 329 EVFNRMDRHDIVS--WNAMIIGYGIHG 353
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 208/397 (52%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++ +EA+ L ++ GVK D +L C + E K +H Y + I D+
Sbjct: 316 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 375
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++MY KCGS+ A RVF M ++ + +W +I G A G G + L+LF +M+
Sbjct: 376 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 435
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ TF+ V +AC A + E +F SM +++GI P EHY +V +LG+ G + EA
Sbjct: 436 VKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 495
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ I Q +P P L + RIHG++ + + A + +++LDP
Sbjct: 496 EDLI-QNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSS 554
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLK-ALNQ 526
+ I PP + + + + +P E L + +
Sbjct: 555 MKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRR 614
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K + YVPD VL D+D++ KE L HSE+LAIA+GL+ST TP+R++KNLRVC DC
Sbjct: 615 LKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDC 674
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A+K +S + RE+IVRD RFHHF G CSC D+W
Sbjct: 675 HSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EAI+L + VK + + C + E AK+VH Y ++ I VL + ++
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALM 280
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
++Y KCG AR +F+ M ++++ W++MING+ ++ +E L LF +M+ G++ ++
Sbjct: 281 DVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKV 340
Query: 380 TFLAVFSACGSADAIEEA---FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T ++ AC A+E ++ E K E ++ GT LV + KCG + E+
Sbjct: 341 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGT----ALVDMYAKCGSI-ESAMR 395
Query: 437 IEQKLPFEPTAEFWEAL 453
+ Q++P E W AL
Sbjct: 396 VFQEMP-EKDVMTWTAL 411
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M +G+ D F +LF+ CG K++H + + D + N ++ MY CG
Sbjct: 131 MMLQGLDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 187
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ AR+VFD M ++S+ SW MI YA L E ++LF +M ++PNE T + V +A
Sbjct: 188 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTA 247
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + +E A E GI T L+ V KCG A+ K+P E
Sbjct: 248 CARSRDLETA-KQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLF-NKMP-EKNL 304
Query: 448 EFWEALRNYARIHGDIDLEDHAEEL 472
W + I+G ++ D+ E L
Sbjct: 305 FCWNIM-----INGHVEDSDYEEAL 324
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYG--KCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K++H L++ + D +K++ GS+ AR VF+ + + + + + +I GY
Sbjct: 57 KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+ L + + ++ M GL P+ TF ++F +CG E +H S K F +
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV--LCEGKQLHCHSTKLGF----AS 170
Query: 415 EHYL--GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
+ Y+ L+ + CG L A++ + K+ + + + YA+ DL A +L
Sbjct: 171 DAYIQNTLMNMYSNCGCLVSARKVFD-KMVNKSVVSWATMIGAYAQ----WDLPHEAIKL 225
Query: 473 MVDLDPSKADPKKIPTPPPKKRTAISILDGKSR 505
++ + P +I T +++L +R
Sbjct: 226 FRRMEIASVKPNEI--------TLVNVLTACAR 250
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 203/353 (57%), Gaps = 29/353 (8%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
K+H +++ + D+ + +I++YGKCG + DA +F + S +W+ +I+ + +G
Sbjct: 308 KIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHG 367
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
++ L+LF +M G++P+ TF+++ SAC + +EE F M+ E+GI P +HY
Sbjct: 368 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHY 426
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +LG+ G+L A FI+ +P +P A W AL RIHG+I+L A + + ++D
Sbjct: 427 GCMVDLLGRAGYLEMAYDFIKD-MPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 485
Query: 478 PSKAD-----------------PKKIPTPP----PKKRTAISILDGKSRLVEF-----RN 511
K+ + KK S ++ ++ F +
Sbjct: 486 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSH 545
Query: 512 PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
P E+L+ L +MK Y+PD +VL D++++ KE L HSERLAIA+G+ISTP
Sbjct: 546 PKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPP 605
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++P+RI KNLRVCGDCHNA K +SRI RE++VRD+ RFHHFKDG CSCGDYW
Sbjct: 606 KSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPN 377
++MY K G + A +VF+ + + + SW+ +I GYA NGL E +++++ M + + PN
Sbjct: 227 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 286
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ T++++ A A+++ IH +K+ + L+ V GKCG L +A
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSL 344
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
Q +P E + W A+ + IHG HAE+ +
Sbjct: 345 FYQ-VPQESSVT-WNAIISCHGIHG------HAEKTL 373
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ ++ D F + + CG + +K+H + + + ++ + +I MY + G
Sbjct: 109 LLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 165
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT------- 380
AR +FD M R M SW+ MI+G NG + L + ++MR G++ N T
Sbjct: 166 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV 225
Query: 381 FLAVFSACGSADAIEEAF 398
F+ +++ G D+ + F
Sbjct: 226 FVDMYAKLGLLDSAHKVF 243
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AK +H + + + ++ +++ +Y G ++ +R FD + + + +W+ MI+ Y
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 356 NGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF----GI 410
NG E + F Q+ + ++P+ TF V ACG+ ++ IH + K F +
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT--LVDGRKIHCWAFKLGFQWNVFV 152
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ H G G LF+ F
Sbjct: 153 AASLIHMYSRFGFTGIARSLFDDMPF 178
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 209/379 (55%), Gaps = 29/379 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K D+ + C + E K++H Y L++ D + N ++++Y KCG + AR
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+FD + + + SW +MI+GY +G G+E + F +MR G++P+E +F+++ AC +
Sbjct: 488 LLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+E+ + F MK++F I P EHY +V +L + G+L +A +FIE LP P A W A
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIET-LPIAPDATIWGA 606
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTPPP 491
L RI+ DI+L + E + +L+P K +KI
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGL 666
Query: 492 KKRTAISILD--GKSRLVEFRNPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
+K S ++ GK L N + + +K+++L +MKE Y P T+Y L + D
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 726
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+ KE AL HSE+LA+A+GL++ P R +R+ KNLRVCGDCH K MS+ RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D+ RFHHFK+G CSC +W
Sbjct: 787 DSNRFHHFKNGYCSCRGFW 805
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 56/243 (23%)
Query: 251 ADLARLCQEGKVKEAIEL--MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
A + CQ G ++ A+EL M + + + + ++ +LC K + KKVH + +
Sbjct: 71 AKILHFCQLGNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNV 130
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHM------------------------------ 338
D VL K++ +Y CG + + RRVFD M
Sbjct: 131 AVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 339 ---------------------ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
DR + SW+ MI+GY NGL + GL++++QM LG+ +
Sbjct: 191 MVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVD 250
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T ++V C ++ + +H ++KS F + L+ + KCG L A +
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSN--TLLDMYSKCGDLDGALRV 308
Query: 437 IEQ 439
E+
Sbjct: 309 FEK 311
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M G+ D + ++ C N K VH ++ST + +N +++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A RVF+ M +R++ SW MI GY +G D ++L +QM K G++ + ++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360
Query: 387 ACGSADAIE 395
AC + +++
Sbjct: 361 ACARSGSLD 369
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAK 297
G++ + + +A ++G+ AI L+ +GVK D ++ C +N K
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGK 372
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VHDY + + +L + N +++MY KCGSM A VF M + + SW+ MI
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG------ 426
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH 416
L+P+ +T + AC S A+E IH +++ G S
Sbjct: 427 ---------------ELKPDSRTMACILPACASLSALERGKEIHGYILRN--GYSSDRHV 469
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG L A+ + +P + W + + +HG
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDM-IPSKDLVS-WTVMISGYGMHG 512
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 210/386 (54%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ V + + ++ C + + +VH +ST D +++N +I+ Y KCG
Sbjct: 824 EMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCG 883
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DAR +F+ + + + SW+ +I+GYA +G +LF+ M K ++ N+ TF+A+ S
Sbjct: 884 CIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLS 943
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
CGS + + F+SM+ + GI P EHY +V +LG+ G L +A FI +P P+
Sbjct: 944 VCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFI-GDIPSAPS 1002
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADP--------KK 485
A W AL + +H +++L + E +++++P S A K
Sbjct: 1003 AMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKS 1062
Query: 486 IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE--------STYVPDTR 537
+ +K +S ++ K + F + D ++ +N M E YVPDT
Sbjct: 1063 MRNIGVRKEPGLSWVEIKGEVHAFSVGS--EDHPCMRVINAMLEWLNLKAIREGYVPDTD 1120
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VLHD+++E K + L HSERLA+AYGL+ TP P+RI+KNLR C DCH K++S+IV
Sbjct: 1121 EVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIV 1180
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
+E+IVRD RFHHF++G CSCGDYW
Sbjct: 1181 KQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I +M V + ++ + C N + K++H++ ++ +L + N +I++Y KC
Sbjct: 722 IRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKC 781
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
M + +F + D + SW+ +I GY+ +G G+ L +F +MR + + T+ +V
Sbjct: 782 SDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVL 841
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC S +I +H KS F + L+ KCG + +A++ E +
Sbjct: 842 RACASTASINHVGQVHCLIEKSTFNSDTIVSN--SLIDSYAKCGCIRDAREIFETLKECD 899
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELM 473
+ W A+ + +HG + ++M
Sbjct: 900 LVS--WNAIISGYAVHGQAAMAQELFDMM 926
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +I+ Y CG ++DARRVFD + + +W M++ Y++N + LQ+F +MR
Sbjct: 568 VGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAV 627
Query: 374 LQPNEQTFLAVFSA--CGSADAIEEAFIHFESMKSEFGISPGTEH--YLGLVGVLGKCGH 429
+ N +V A C S+ + + IH S+K+ + TE Y L+ + KCG+
Sbjct: 628 SKLNPFALTSVLRAAVCLSSVVLGKG-IHACSVKTLY----DTERHVYGALLDMYAKCGN 682
Query: 430 LFEAQQFIEQ 439
+ +A+ E
Sbjct: 683 IEDARLAFEM 692
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++MY KCG++ DAR F+ + + + W LMI+ YA ++ +LF +M + + PN
Sbjct: 673 LLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPN 732
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
E + +V AC + ++ IH ++K I +E ++G L+ + KC +
Sbjct: 733 EFSLSSVLQACANMPLLDLGKQIHNHAIK----IGHESELFVGNALIDLYAKCSDM 784
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQS--TIRGDLVLNNKVIEMYGKCGSMTDAR 332
D+ + L + C + VH + ++S R DL N ++ MY K G A
Sbjct: 426 VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAH 485
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVFD + +R+M S+ ++ G+A G +E LF+++R G + N+ V + D
Sbjct: 486 RVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMD 545
Query: 393 AIEEAF 398
+ A+
Sbjct: 546 TLGLAW 551
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 209/373 (56%), Gaps = 36/373 (9%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + C + E+ K VH Y L+ + L + N +I MYG+CG ++ +RVFD+M R
Sbjct: 287 SVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKR 346
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW+ +I+ Y +GLG + +Q+FE M G+ P+ TF+ V AC A +EEA I F
Sbjct: 347 DVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILF 406
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
ESM +++ I P EHY +V +LG+ L EA + I Q + F+P W +L RIH
Sbjct: 407 ESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELI-QNMDFKPGPTVWGSLLGSCRIHC 465
Query: 462 DIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAISIL 500
+++L + A ++ +L+P A K++ + +K + S +
Sbjct: 466 NVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWI 525
Query: 501 DGKSRL-----VEFRNPTLYRDDEKLKA-----LNQMKESTYVPDTRYVLHDIDQEAKEQ 550
+ K ++ +E NP + E+L A L ++K YVP T V +D+D+E KE+
Sbjct: 526 EVKRKIYSLVSIEEYNPQI----EELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKER 581
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
+L HS +LA+A+GLI+T +RI NLR+C DCH +K +S+ RE+++RD RFH
Sbjct: 582 IVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFH 641
Query: 611 HFKDGKCSCGDYW 623
FKDG CSCGDYW
Sbjct: 642 CFKDGVCSCGDYW 654
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + L+ G + + ++++Y + G ++ A VF M D+++ SW MI YA
Sbjct: 198 GKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAK 257
Query: 356 NGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP 412
N + + L+LF+ M PN T ++V AC S A+E +H ++ G+
Sbjct: 258 NEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR--GLDS 315
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + G+CG + Q+ + + + W +L + +HG
Sbjct: 316 TLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVIS--WNSLISIYGMHG 362
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC+ G +K+A++L+ F L C + VH + S + D L
Sbjct: 53 LCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLA 112
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I MY GS+ A +VFD ++++ W+ + A G++ L L+ QM +G+
Sbjct: 113 TKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIP 172
Query: 376 PNEQTFLAVFSAC 388
N T+ V AC
Sbjct: 173 SNRFTYTYVLKAC 185
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 215/379 (56%), Gaps = 29/379 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
++AD S F T+ + + K++H + ++S ++ + +++MY KCGS+ DA
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VF+ M DR+ SW+ +I+ +ADNG G+ + F +M + GLQP+ + L V +AC
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+E+ +F++M +GI+P +HY ++ +LG+ G EA++ +++ +PFEP W +
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE-MPFEPDEIMWSS 626
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSK---------------------ADPKK-IPTPP 490
+ N RIH + L + A E + ++ + D KK +
Sbjct: 627 VLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 686
Query: 491 PKKRTAISILDGKSRLVEFR--NPTLYRDDEKLKALNQMKEST----YVPDTRYVLHDID 544
KK A S ++ ++ F + T DE ++ +N++ Y PDT V+ D+D
Sbjct: 687 IKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVD 746
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
++ K ++L YHSERLA+A+ LISTP P+ ++KNLR C DCH AIK++S+IV RE+ VR
Sbjct: 747 EQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVR 806
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D RFHHF +G CSCGDYW
Sbjct: 807 DTSRFHHFSEGVCSCGDYW 825
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ + N + +++H L +T L + N +++MY KC +A +F +
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
R+ SW +I+GY GL GL+LF +MR L+ ++ TF V A S A +
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF-----ASL 468
Query: 400 HFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
F I G + GLV + KCG + +A Q E+ +P + A W AL +
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE-MP-DRNAVSWNALIS 526
Query: 456 YARIHGD 462
+GD
Sbjct: 527 AHADNGD 533
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N +I + K G ++ AR +FD M DR++ +W +++ YA N DE +LF QM +
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS 139
Query: 373 G--LQPNEQTFLAVFSACGSA---DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
P+ TF + C A +A+ + +H ++K F +P +L + VL K
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQ--VHAFAVKLGFDTNP----FLTVSNVLLK 192
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD--LVLNNKVIEMYGKCGSMTDARR 333
D F TL C + +VH + ++ + L ++N +++ Y + + A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+F+ + ++ +++ +I GY +GL E + LF +MR+ G QP++ TF V A
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+ +++H + + D + N++++ Y K + + R +FD M + S++++I+
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGIS 411
Y+ + L F +M+ +G F + S + +++ +H +++ + +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA----T 381
Query: 412 PGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR--IHG 461
+ ++G LV + KC +FE + I + LP T + + Y + +HG
Sbjct: 382 ADSILHVGNSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
>gi|302804238|ref|XP_002983871.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
gi|300148223|gb|EFJ14883.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
Length = 481
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 216/411 (52%), Gaps = 35/411 (8%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFEL----CGNPKWYENAKKVHD 301
+P A +A E K KEAIEL +++ T+ + C N + + H
Sbjct: 73 IPAYTAMMAGYVNEKKPKEAIELYHALQQSNLPVTNTVLAIVLGACSNLVDSDEGRAAHY 132
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLG 359
++ ++ D V+ N V MY KCG + +AR VFD M R++D +W +I Y G
Sbjct: 133 TAIELGLQDDPVVQNAVATMYAKCGGLEEARAVFDAMEIRNVDALTWSSLIGVYGSQGKT 192
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG 419
DE L+L +M+ G+ + F + +C + EA F M+S++GI PG EH+
Sbjct: 193 DESLRLARRMQHEGMILDGNCFANLIFSCANGRQDAEACRFFMDMRSDYGIVPGKEHFGC 252
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD---- 475
LV +G+ GHL +A+ I + +P +P W L A++HGD + E+M+
Sbjct: 253 LVDAVGRAGHLKDAEDLI-KAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIMMKMNPQ 311
Query: 476 LDPSKADPKKIPTPPPKKRTAISILD--------GKSRLV--------------EFRNPT 513
LDP + + R ++ GKS +
Sbjct: 312 LDPLGTGANRTAARWEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRSHIHTKE 371
Query: 514 LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 573
+Y + +++ + + KE Y+PDTRYVLHD+ ++ K + L YHSERLA+AYG I+TP +
Sbjct: 372 IYAEVDRITEICK-KEENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIATPPGSA 430
Query: 574 LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
LR+IKNLRVCGDCH K+ ++I+ RE+IVRDN+RFHHF KDG CSCGDYW
Sbjct: 431 LRVIKNLRVCGDCHTISKMWAKIMQREIIVRDNRRFHHFAKDGTCSCGDYW 481
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + F T+FE + E+ K++ + + ++ ++ M+ + S++DA
Sbjct: 5 GVWPNERTFLTIFE---RVRHIEDGKRLAEKVKEQQGLDLSIVGAALVTMFCRFSSVSDA 61
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS- 390
R FD + ++ + ++ M+ GY + E ++L+ +++ L V AC +
Sbjct: 62 RDAFDKIPEKGIPAYTAMMAGYVNEKKPKEAIELYHALQQSNLPVTNTVLAIVLGACSNL 121
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
D+ E H+ ++ E G+ + + KCG L EA+ + A W
Sbjct: 122 VDSDEGRAAHYTAI--ELGLQDDPVVQNAVATMYAKCGGLEEARAVFDAMEIRNVDALTW 179
Query: 451 EAL 453
+L
Sbjct: 180 SSL 182
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 213/404 (52%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q ++ EA L D+ V D ++ C E K +H Y +S
Sbjct: 167 AMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS 226
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I D L VI+MY KCG + A VF+ + + + SW+ MI G A +G G+ ++LF
Sbjct: 227 GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELF 286
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M + + P+ TF+ V SAC + +EE +F+ M G+ PG EH+ +V +LG+
Sbjct: 287 KEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGR 346
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA++ I + +P P A AL RIHG+ +L + + +++L+P +
Sbjct: 347 AGLLEEARKLINE-MPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVL 405
Query: 482 ------------DPKKIPTP----PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
D K+ KK S+++ +S + EF +P K
Sbjct: 406 LANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAK 465
Query: 521 L-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L + L ++ YVPDT VLHDID+E KE L YHSE+LAIA+GL+ T LRI KN
Sbjct: 466 LDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKN 525
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR+C DCH A K++S++ RE+I+RD RFHHF+ G CSC DYW
Sbjct: 526 LRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ K V + + L C E K++H + L+ D N +I MY S
Sbjct: 85 MLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQS 144
Query: 328 MTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ ARRVFD+M DR+ SW+ MI Y + E LF++MR + ++ ++
Sbjct: 145 LEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASML 204
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SAC A+E+ +IH KS GI ++ ++ + KCG L +A + + LP +
Sbjct: 205 SACTGLGALEQGKWIHGYIEKS--GIELDSKLATTVIDMYCKCGCLEKASEVFNE-LPQK 261
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ W + +HG + A EL +++ P I
Sbjct: 262 GISS-WNCMIGGLAMHGK---GEAAIELFKEMEREMVAPDGI 299
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 209/379 (55%), Gaps = 29/379 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K D+ + C + E K++H Y L++ D + N ++++Y KCG + AR
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+FD + + + SW +MI GY +G G+E + F +MR G++P+E +F+++ AC +
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+E+ + F MK++F I P EHY +V +L + G+L +A +FIE LP P A W A
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET-LPIAPDATIWGA 468
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTPPP 491
L RI+ DI+L + E + +L+P K +KI
Sbjct: 469 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGL 528
Query: 492 KKRTAISILDGKSRLVEFR--NPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
+K S ++ K R+ F N + + +K+++L +MKE Y P T+Y L + D
Sbjct: 529 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 588
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+ KE AL HSE+LA+A+GL++ P R +R+ KNLRVCGDCH K MS+ RE+++R
Sbjct: 589 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 648
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D+ RFHHFKDG CSC +W
Sbjct: 649 DSNRFHHFKDGYCSCRGFW 667
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M G+ D + ++ C K VH ++S+ + +N +++MY KCG
Sbjct: 103 QMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 162
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A RVF+ M +R++ SW MI GY +G D + L +QM K G++ + ++
Sbjct: 163 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 222
Query: 387 ACGSADAIE 395
AC + +++
Sbjct: 223 ACARSGSLD 231
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GVK D ++ C +N K VHDY + + +L + N +++MY KCGSM
Sbjct: 208 EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEG 267
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF M + + SW+ M+ L+P+ +T + AC S
Sbjct: 268 ANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILPACAS 306
Query: 391 ADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A+E IH +++ G S LV + KCG L A+ + +P + +
Sbjct: 307 LSALERGKEIHGYILRN--GYSSDRHVANALVDLYVKCGVLGLARLLFDM-IPSKDLVSW 363
Query: 450 WEALRNYARIHG 461
+ Y +HG
Sbjct: 364 TVMIAGYG-MHG 374
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +FD + DR + SW+ MI+GY NGL + GL +++QM LG+ + T ++V C
Sbjct: 66 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ + +H ++KS F + L+ + KCG L A + E+
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSN--TLLDMYSKCGDLDGALRVFEK 173
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 203/382 (53%), Gaps = 34/382 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VK DA F T+ C + E K V + + D + V+ +YGKCG + + R
Sbjct: 451 VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGR 510
Query: 333 RVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R+FD + R + W+ MI YA G E L+LF +M G++P+ +F+++ AC
Sbjct: 511 RIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHT 570
Query: 392 DAIEEAFIHFESMKSEF-GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++ +F SM +E+ ++ +H+ + +LG+ G L EA++F+E KLP +P A W
Sbjct: 571 GLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLE-KLPVKPDAVAW 629
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
+L R H D+ ++ L+P A K +
Sbjct: 630 TSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQ 689
Query: 490 PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH 541
KK +S ++ + +F RN + + KL +QMKE YVPDT+ VLH
Sbjct: 690 GVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLH--SQMKECGYVPDTKMVLH 747
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
+D++ KE+ L HSERLAIA GLISTP TPLR+ KNLRVC DCH A K++S+I GR++
Sbjct: 748 FVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKI 807
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFH FKDGKCSC DYW
Sbjct: 808 VVRDPTRFHLFKDGKCSCQDYW 829
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 263 KEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
K+AI+L + ++AD + +L C + + + +H + + ++++ N ++ M
Sbjct: 332 KDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 391
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-------L 374
Y KCGS T+AR VFD M RS+ SW +I+ Y L E LF+QM +L +
Sbjct: 392 YAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 451
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+P+ F+ + +AC A+E+ + E S G+S +V + GKCG + E +
Sbjct: 452 KPDALAFVTILNACADVSALEQGKMVSEQAAS-CGLSSDKAVGTAVVNLYGKCGEIEEGR 510
Query: 435 QFIEQKLPFEPTAEFWEAL 453
+ + + P + W A+
Sbjct: 511 RIFD-GVCSRPDVQLWNAM 528
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 102/189 (53%), Gaps = 16/189 (8%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G V EA+ ++ G+KA S T+ C +P ++ + +H S +L++
Sbjct: 226 GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVA 285
Query: 316 NKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N V+ MYG+CG++ +AR+VFD M A R + SW++M++ Y N G + +QL+++M+
Sbjct: 286 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ--- 342
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHL 430
L+ ++ T++++ SAC SA+ + +H + + E + G LV + KCG
Sbjct: 343 LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN----ALVSMYAKCGSH 398
Query: 431 FEAQQFIEQ 439
EA+ ++
Sbjct: 399 TEARAVFDK 407
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR-GDLVLNNKVIEMYG 323
++L + V+A+ + + L + C + +K+H ++ + G+L+L N ++ MY
Sbjct: 31 VLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYA 90
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
C S DA+ FD + R++ SW ++ +A +G E L+ E+MR+ G++P+ TF+
Sbjct: 91 HCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFIT 150
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+CG +++ + IH + S I P + L+ + KCG L A++ + K+
Sbjct: 151 ALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKR-VFAKME 207
Query: 443 FEPTAEFWEALRNYARIHGDI 463
W + +HG++
Sbjct: 208 RTRNVISWSIMAGAHALHGNV 228
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 16/196 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A G+ KE + +++ GV+ DA F T CG+P+ + ++H + S +
Sbjct: 117 VAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRL 176
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFE 367
D ++N ++ MY KCGS++ A+RVF M R++ SW +M +A +G E L+ F
Sbjct: 177 EIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFR 236
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH----FESMKSEFGISPGTEHYLGLVG 422
M LG++ + + + SAC S +++ IH +SE ++ ++
Sbjct: 237 FMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVAN------AVMT 290
Query: 423 VLGKCGHLFEAQQFIE 438
+ G+CG + EA++ +
Sbjct: 291 MYGRCGAVEEARKVFD 306
>gi|302806445|ref|XP_002984972.1| hypothetical protein SELMODRAFT_121321 [Selaginella moellendorffii]
gi|300147182|gb|EFJ13847.1| hypothetical protein SELMODRAFT_121321 [Selaginella moellendorffii]
Length = 379
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 206/368 (55%), Gaps = 28/368 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L C + A+++H L S RG+ ++ ++++ MYGKCGS+ DAR +FD MA+R+
Sbjct: 13 LVRACARSRHLGEARRIHAQILASPHRGNKLMLDQLVMMYGKCGSVEDAREMFDSMAERN 72
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
SW+ ++ YA G +E +++F +M G+ P+E F+ V +AC A +E ++ F
Sbjct: 73 EVSWNALLAAYAQRGDVEEVVEVFWRMIVEGVSPDEVAFVTVLTACSHAGLLETSWELFV 132
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
SM+ + G+ P ++HYL ++ VLG+ G L A++ I +PF P W L ++H D
Sbjct: 133 SMRGDHGLRPLSQHYLCMIDVLGRSGLLSSAEELI-ATMPFIPDEVAWGMLLAACKVHKD 191
Query: 463 IDLEDHAEELMVDLDP---------------------SKADPKKIPTPPPKKRTAISILD 501
+ V DP + A KK+ + K+ IS++
Sbjct: 192 VSRAARIARDAVAADPEDCSSYTLLRNMLGIAGRTEDAAAVRKKMVSSGLSKQPGISLII 251
Query: 502 GKSRLVEFRN-----PTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
S + F + P ++ +L+ L +QM+ES YVPDT V H + + K + + +H
Sbjct: 252 VNSEMHSFTSGDESHPRIHEIRAELQRLTSQMRESGYVPDTHDVFHAVSEAGKSELVWHH 311
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LAIA+GLIST PL I KNLRVC DCH+A K +S++ GR ++VRD+ RFH F++G
Sbjct: 312 SEKLAIAFGLISTSPGVPLWIRKNLRVCLDCHSATKFISKVTGRSIVVRDSYRFHKFENG 371
Query: 616 KCSCGDYW 623
CSCGD+W
Sbjct: 372 SCSCGDFW 379
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 218/398 (54%), Gaps = 34/398 (8%)
Query: 258 QEGKVKEAIELMD-----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EAIE+ K + + + ++ + + ++H +++ + D+
Sbjct: 496 QNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDV 555
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I++YGKCG + DA +F + S +W+ +I+ + +G ++ L+LF +M
Sbjct: 556 FVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF+++ SAC + +EE F M+ E+GI P +HY +V +LG+ G+L
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEM 674
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------- 482
A FI + +P +P A W AL RIHG+I+L A + + ++D
Sbjct: 675 AYGFI-KDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYA 733
Query: 483 -------PKKIPTPP----PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN- 525
K+ + KK S ++ ++ F +P E+L+ L
Sbjct: 734 NVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+MK Y+PD +VL D++++ KE L HSERLAIA+G+ISTP ++P+RI KNLRVCGD
Sbjct: 794 KMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGD 853
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CHNA K +SRI RE++VRD+ RFHHFKDG CSCGDYW
Sbjct: 854 CHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGK 324
+++ G + D +L + + +N++ VH + ++ + D+V+ N V++MY K
Sbjct: 406 VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAK 465
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLA 383
G + A +VF+ + + + SW+ +I GYA NGL E +++++ M + + PN+ T+++
Sbjct: 466 LGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 525
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ A A+++ IH +K+ + L+ V GKCG L +A Q +P
Sbjct: 526 ILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQ-VP 582
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
E + W A+ + IHG HAE+ +
Sbjct: 583 QESSVT-WNAIISCHGIHG------HAEKTL 606
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ ++ D F + + CG + +++H + + + ++ + +I MY + G
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGT---LVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
AR +FD M R M SW+ MI+G NG + L + ++MR G++ N T +++
Sbjct: 266 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV 325
Query: 388 CGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C I A IH +K EF + L+ + K G+L +A++ +Q
Sbjct: 326 CPQLGDISTAMLIHLYVIKHGLEFDLFVSN----ALINMYAKFGNLEDARKAFQQ 376
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ L Q G +A++++D+ G+K + ++ +C A +H Y ++
Sbjct: 286 AMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKH 345
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ DL ++N +I MY K G++ DAR+ F M + SW+ +I Y N F
Sbjct: 346 GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405
Query: 367 EQMRKLGLQPNEQTFLAVFS 386
+M+ G QP+ T +++ S
Sbjct: 406 VKMQLNGFQPDLLTLVSLAS 425
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AK +H + + + ++ +++ +Y G ++ +R FD + + + +W+ MI+ Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 356 NGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF----GI 410
NG E + F Q+ + ++P+ TF V ACG+ ++ IH + K F +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT--LVDGRRIHCWAFKLGFQWNVFV 252
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ H G G LF+ F
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPF 278
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 217/408 (53%), Gaps = 33/408 (8%)
Query: 248 PSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P A ++ Q+G +EA+++ + V D + F + + N K++H
Sbjct: 413 PWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSV 472
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++ + + + +++MY CGSM DA VF M DR++ W+ +I+ Y+ NG +
Sbjct: 473 IRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATF 532
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
F M + GL P+ +FL+V +AC +E+A +F SM + + P +HY ++ V
Sbjct: 533 SSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDV 592
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--- 480
L + G EA+ I + +PFEP W ++ N RIH + DL A + + +D +
Sbjct: 593 LCRSGRFNEAENLISE-MPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAA 651
Query: 481 ------------------ADPKK-IPTPPPKKRTAISILDGKSRLVEFR-----NPTLYR 516
A KK + KK TA S ++ R+ F +P +
Sbjct: 652 AYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQ 711
Query: 517 DDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
K+ +L + M + Y PDT L ++D+E K ++L YHSERLAIA+ LI+TP +P+
Sbjct: 712 IRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPII 771
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
I+KNLR C DCH AIK++S+IVGRE+ VRD+ RFHHF+DG CSCGDYW
Sbjct: 772 IMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ GVK D F TL + + ++H + ++ L++ N +++ Y K
Sbjct: 133 EMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTC 192
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A ++F M + S+++MI GY G +E L+LF QMR + QP+ TF A+
Sbjct: 193 CLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLG 252
Query: 387 -ACGSADAIEEAFIHFESMKSEF 408
+ GS D I IH ++K+ +
Sbjct: 253 MSVGSEDVIFGQQIHGLAIKTSY 275
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ + ++ H + +T ++ + N +++MY KC DA R+F ++A
Sbjct: 348 FATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---- 395
R+ W +I+ Y G +E L++F++M + + ++ TF + A + ++
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ 467
Query: 396 --EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ I + S F S LV + CG + +A + + +++P + W AL
Sbjct: 468 LHSSVIRLGLLSSVFSGSV-------LVDMYANCGSMKDAIE-VFKEMP-DRNIVCWNAL 518
Query: 454 RNYARIHGD 462
+ +GD
Sbjct: 519 ISAYSQNGD 527
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y K ++ AR +F+ M R+ SW +MI GY+ N E L+ +M + G++
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF + S ++E + S FG S + LV K L A Q
Sbjct: 141 PDHITFATLLSGFDDTTTLKEV-LQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQ 199
Query: 436 FIEQKLPFEPTAEFWEALRNYAR 458
+ +P + + F + Y +
Sbjct: 200 LFSE-MPTKDSVSFNVMITGYTK 221
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H ++++ D+ + N +++ Y K + A+ +FD M + S++++I GYA N
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
G ++ LF++++ G + + F F+ S AIE
Sbjct: 324 GQYEKSFDLFKRLQ--GTSFDRKNF--PFATMLSVAAIE 358
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 213/384 (55%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++++ V+ + + CG E + VH Y + I ++ + +I+MY KCG
Sbjct: 62 QMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCG 121
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DAR VF+ ++++ + +W+ M+ GYA +G + L+LF++M +G QP + TF+ V +
Sbjct: 122 SLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLN 181
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A + E + F SMK E+GI P EHY +V +LG+ G+L EA + + + + +
Sbjct: 182 ACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELV-KNMEIDQD 240
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------PPPKKRTA 496
W L R+HG+I L + E +V + + + + + + RT
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300
Query: 497 I-----------SILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYV 539
+ S ++ +++ EF R+P E L+ +N +K Y P T V
Sbjct: 301 MKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIV 360
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD++ KE++L HSE+LA+A+GLI+T T ++I+KNLRVC DCH K++S+I GR
Sbjct: 361 LHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGR 420
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
++++RD RFHHF +G CSCGDYW
Sbjct: 421 KVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
LV +I Y K G + +AR +FD + +R W++MI+GYA +GL +EGL LF QM
Sbjct: 6 LVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLN 65
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++PNE T LAV SACG A+E ++H S GI L+ + KCG L
Sbjct: 66 AKVRPNEVTVLAVLSACGQTGALETGRWVH--SYIENNGIGINVRVGTSLIDMYSKCGSL 123
Query: 431 FEAQQFIEQ 439
+A+ E+
Sbjct: 124 EDARLVFER 132
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 215/399 (53%), Gaps = 35/399 (8%)
Query: 258 QEGKVKEAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G +EA+ L + ++ D ++ +C +E K+VH +++
Sbjct: 186 QMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSS 245
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + +I +Y KCG + +VF+ + R++ W+ M+ A + +LFE+M +
Sbjct: 246 CFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMER 305
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
+G++PN TFL + AC A +E+ F MK E GI PG++HY LV +LG+ G L
Sbjct: 306 VGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMK-EHGIEPGSQHYATLVDLLGRAGKLE 364
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------- 483
EA I++ +P +PT W AL RIHG+ +L + + ++ +
Sbjct: 365 EAVLVIKE-MPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAY 423
Query: 484 -------------KKIPTPPPKKRTAISILDGKSRLVEF----RNPTLYRDD-EKLKALN 525
K + KK T +S ++ +R+ F R+ R+ EKL+ L
Sbjct: 424 AAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELG 483
Query: 526 Q-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ M ++ YV DT +VL ++D + K Q + YHSERLAIA+GLI+ P P+R++KNLRVCG
Sbjct: 484 EEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCG 543
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH AIK +S+ GR +IVRDN RFH F+DGKC+CGDYW
Sbjct: 544 DCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM- 369
D+ + + +++ Y KCG + AR+VFD M +++ SW MI GY+ GL +E L LF++
Sbjct: 142 DVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRAL 201
Query: 370 -RKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+ ++ N+ T +V C ++ E +H K+ F S L+ + KC
Sbjct: 202 EQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVAS--SLISLYSKC 259
Query: 428 G 428
G
Sbjct: 260 G 260
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 219/398 (55%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA++L + V+ D C E K +H Y ++ IR D V
Sbjct: 253 QAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSV 312
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I+MY KCG M +A VF ++ +S+ +W +I+GYA +G G E + F +M+K+G
Sbjct: 313 LGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 372
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TF V +AC +EE + F +M+ ++ + P EHY +V +L + G L EA
Sbjct: 373 IKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEA 432
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
++FI Q++P +P A W AL RIH +I+L + E+++ +DP
Sbjct: 433 KRFI-QEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAM 491
Query: 479 SKADPKKIPTPPPKKRTAISILDGKSRLV------EF-----RNPTLYRDDEKLKAL-NQ 526
K K T K ++ + G S + EF +P + + K K + +
Sbjct: 492 GKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWKIMRRK 551
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLY-HSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++E+ YVP+ +L D+ + + + +++ HSE+LAI YGLI T T +RI+KNLRVC D
Sbjct: 552 LEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTKPGTTIRIMKNLRVCKD 611
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH K++S+I R++++RD RFHHF+DGKCSCGDYW
Sbjct: 612 CHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V N VI+ Y K G M A +F M +++ SW MI+GY G+ E LQLF +M+
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKC 427
++P+ + SAC A+E+ +IH K+ + + LG L+ + KC
Sbjct: 269 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRM----DSVLGCVLIDMYAKC 324
Query: 428 GHLFEAQQF---IEQKLPFEPTAEFWEALRNYARIHG 461
G + EA + I++K + + W AL + HG
Sbjct: 325 GDMGEALEVFKNIQRK-----SVQAWTALISGYAYHG 356
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 213/404 (52%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q ++ EA L D+ V D ++ C E K +H Y +S
Sbjct: 222 AMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS 281
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I D L VI+MY KCG + A VF+ + + + SW+ MI G A +G G+ ++LF
Sbjct: 282 GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELF 341
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M + + P+ TF+ V SAC + +EE +F+ M G+ PG EH+ +V +LG+
Sbjct: 342 KEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGR 401
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----- 481
G L EA++ I + +P P A AL RIHG+ +L + + +++L+P +
Sbjct: 402 AGLLEEARKLINE-MPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVL 460
Query: 482 ------------DPKKIPTP----PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEK 520
D K+ KK S+++ +S + EF +P K
Sbjct: 461 LANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAK 520
Query: 521 L-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L + L ++ YVPDT VLHDID+E KE L YHSE+LAIA+GL+ T LRI KN
Sbjct: 521 LDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKN 580
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR+C DCH A K++S++ RE+I+RD RFHHF+ G CSC DYW
Sbjct: 581 LRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ K V + + L C E K++H + L+ D N +I MY S
Sbjct: 111 MLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQS 170
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ ARRVFD+M R + SW +I GY+ G D+ ++FE M + N ++ A+ +A
Sbjct: 171 LEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMP----ERNSVSWNAMIAA 226
Query: 388 CGSADAIEEAFIHFESMKSE 407
++ + EAF F+ M+ E
Sbjct: 227 YVQSNRLHEAFALFDRMRLE 246
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 13/230 (5%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+EGK A ++ G AD L + N + E A++V D Q D+V
Sbjct: 137 EEGKQIHA-HVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR----DVVSWTS 191
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y + G + AR VF+ M +R+ SW+ MI Y + E LF++MR + +
Sbjct: 192 LITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLD 251
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ ++ SAC A+E+ +IH KS GI ++ ++ + KCG L +A +
Sbjct: 252 KFVAASMLSACTGLGALEQGKWIHGYIEKS--GIELDSKLATTVIDMYCKCGCLEKASEV 309
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ LP + + W + +HG + A EL +++ P I
Sbjct: 310 FNE-LPQKGISS-WNCMIGGLAMHGK---GEAAIELFKEMEREMVAPDGI 354
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 214/401 (53%), Gaps = 37/401 (9%)
Query: 258 QEGKVKEAIEL------MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G A++L MDK +K + C ++VH Y L++ G
Sbjct: 588 QHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRN-FYGS 646
Query: 312 LVL--NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
++L N +I+MY K G + A+ VFD+M R+ SW ++ GY +G G++ L++F++M
Sbjct: 647 VMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEM 706
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
RK+ L P+ TFL V AC + ++ F M +FG+ PG EHY +V + G+ G
Sbjct: 707 RKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGR 766
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------- 480
L EA + I + +P EPT W AL + R+H +++L + A +++L+
Sbjct: 767 LGEAMKLINE-MPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825
Query: 481 --ADPKK----------IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKA 523
A+ ++ + KKR S + G+ + F +P + E L
Sbjct: 826 IYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLAD 885
Query: 524 LNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L Q +K YVP T + LHD+D E K L HSE+LA+AYG+++ R P+RI KNLR+
Sbjct: 886 LIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRI 945
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH+AI +S+I+ E+I+RD+ RFHHFK+G CSC YW
Sbjct: 946 CGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 89/229 (38%), Gaps = 42/229 (18%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + C + ++VH + ++S + D+ + N V++MY KCG M +A +VF
Sbjct: 363 DVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVF 422
Query: 336 DHMADRSMDSWHLM-----------------------------------INGYADNGLGD 360
M + + SW+ M I GYA G G
Sbjct: 423 QRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGC 482
Query: 361 EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF---GISPGTEH 416
E L +F QM G +PN T +++ SAC S A+ H ++K G PG +
Sbjct: 483 EALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADD 542
Query: 417 YL---GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
GL+ + KC A++ + P + W + HGD
Sbjct: 543 LKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGD 591
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR---- 309
Q G+ EA+++ D G + + +L C + + K+ H Y ++ +
Sbjct: 477 QRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGP 536
Query: 310 ----GDLVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGL 363
DL + N +I+MY KC S AR++FD ++ DR + +W +MI GYA +G + L
Sbjct: 537 DPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNAL 596
Query: 364 QLFEQMRKL--GLQPNEQTFLAVFSACGSADAIE 395
QLF M K+ ++PN+ T AC A+
Sbjct: 597 QLFSGMFKMDKSIKPNDFTLSCALVACARLAALR 630
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G D F +F+ C N +H +S ++ + N V+ MYGKCG++ A
Sbjct: 254 GWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHA 313
Query: 332 RRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVFS 386
+FD + R + SW+ +++ Y + L LF +M R L + P+ + + +
Sbjct: 314 HNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHL-MSPDVISLVNILP 372
Query: 387 ACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC S A ++ +H S++S G+ +V + KCG + EA + + Q++ F+
Sbjct: 373 ACASLAASLRGRQVHGFSIRS--GLVDDVFVGNAVVDMYAKCGKMEEANK-VFQRMKFKD 429
Query: 446 TAEFWEALRNYA---RIHGDIDLEDHAEELMVDLD 477
+ + Y+ R+ + L + E ++LD
Sbjct: 430 VVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD 464
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 209/385 (54%), Gaps = 30/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+K + ++ C E + +HDY + + + +N +I+MY KCG
Sbjct: 229 EMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCG 288
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M R +W +M+ YA++G G E + +FE+M+K G++P++ TFL V
Sbjct: 289 SLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLY 348
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + E +F+SM+ E+GI G +HY + +L + G L A +FI++ LP +PT
Sbjct: 349 ACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDE-LPIKPT 406
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI------PTPPPKKRTAISIL 500
A W L + HGD+D+ E +++LD S I T ++ + L
Sbjct: 407 AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKL 466
Query: 501 DGKSRLVEFRNPTLYRDDEKL---------------------KALNQMKESTYVPDTRYV 539
+ +V+ + D + + + Q+K YVP+T +V
Sbjct: 467 MSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHV 526
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
H ++ +E K +L YHSE+LAI++GL++T T LRI+KNLRVC DCH+ K++S +
Sbjct: 527 FHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFN 586
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD RFHHF+DG CSCGDYW
Sbjct: 587 RRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + + +M++GV D F +L + C + + E ++ H +++ +
Sbjct: 118 CAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAP 177
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I MY +CG + AR +FD M + S++ MI + L E L LF +M+ GL+P
Sbjct: 178 TLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKP 237
Query: 377 NEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
T ++V SAC A+E +IH M+ + + T L+ + KCG L +A
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNT----ALIDMYAKCGSLEDA 293
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 331 ARRVFDHMADRSMDSWH-LMINGYA----DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
AR+VFD + W+ ++ GYA G +E ++F +M + G+ P+ TF+++
Sbjct: 86 ARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLL 145
Query: 386 SACGSADAIEE 396
AC SA A EE
Sbjct: 146 KACASARAGEE 156
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 224/385 (58%), Gaps = 31/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M +G K D F T+ C + E +VH +++ + D+V+ + +++MY KCG
Sbjct: 752 MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGK 811
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A R F+ M R++ SW+ MI+GYA +G G + L++F +M++ G P+ TF+ V SA
Sbjct: 812 IDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSA 871
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C ++E + HF+SM +G+SP EH+ +V +LG+ G + + + FI + +P +P
Sbjct: 872 CSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFI-KTMPMDPNI 930
Query: 448 EFWE-ALRNYARIHG-DIDLEDHAEELMVDLDP------------------------SKA 481
W L R +G + +L A +++++L+P ++
Sbjct: 931 LIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARL 990
Query: 482 DPKKIPTPPPKKRTAISILDGKSRLV--EFRNPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
+K + +++ DG V + +P + EKLK L N+++++ YVP+T+Y
Sbjct: 991 AMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKY 1050
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
L+D++ E KE+ L YHSE+LAIA+ +++ + P+RI+KNLRVCGDCH A K +S+IVG
Sbjct: 1051 ALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVG 1109
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++I+RD+ RFHHF G CSCGDYW
Sbjct: 1110 RQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 226 PNQLNNVPNNMNQCPAGDQVLPPS-VADLARLCQEGKVKEAI----ELMDKGVKADASCF 280
+ +N Q P DQV S + LA+ E V +A+ E+M G + + F
Sbjct: 605 TDSINECQKVFFQMPEYDQVSWNSFIGALAK--YEASVLQALKYFLEMMQAGWRPNRVTF 662
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+ + ++H L+ ++ D + N ++ YGKC M D +F M++
Sbjct: 663 INILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSE 722
Query: 341 RSMD-SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
R + SW+ MI+GY +G+ + + L M + G + + TF V SAC S +E
Sbjct: 723 RRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGME 782
Query: 399 IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
+H ++++ E + G+ LV + KCG + A +F E +P + + Y
Sbjct: 783 VHACAVRACLESDVVVGS----ALVDMYAKCGKIDYASRFFEL-MPVRNIYSWNSMISGY 837
Query: 457 ARIHG 461
AR HG
Sbjct: 838 AR-HG 841
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKC-GSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++H + + D++L+N ++ MY C GS+ DA RVFD + R+ +W+ +I+ Y
Sbjct: 264 QIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRR 323
Query: 357 GLGDEGLQLFEQMR----KLGLQPNEQTFLA-VFSACGSADA 393
G +LF M+ +L L+PNE T + V +AC AD
Sbjct: 324 GDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADC 365
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A +H ++ D+ N +I +Y + G++ AR++FD M +++ SW +I+GY
Sbjct: 158 DANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYT 217
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
N + DE LF+ + GL PN + AC
Sbjct: 218 QNRMPDEACSLFKGVISSGLLPNHFAVGSALRAC 251
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 296 AKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
++VH Y +S + + + N ++ MYGKC ++ +A VF M + SW+ MI+G
Sbjct: 474 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
N +E + F M++ G+ P+ + ++ S+C S
Sbjct: 534 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSS 569
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + W +++H + + D+ ++N ++ +Y + S+ + ++VF M + SW
Sbjct: 567 CSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSW 626
Query: 347 HLMINGYAD-NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
+ I A + L+ F +M + G +PN TF+ + +A S + IH +
Sbjct: 627 NSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALIL 686
Query: 405 KSEFGISPGTEHYLGLVGVLGKC 427
K E+ L+ GKC
Sbjct: 687 KYSVADDNAIEN--ALLAFYGKC 707
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 209/385 (54%), Gaps = 30/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+K + ++ C E + +HDY + + + +N +I+MY KCG
Sbjct: 229 EMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCG 288
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M R +W +M+ YA++G G E + +FE+M+K G++P++ TFL V
Sbjct: 289 SLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLY 348
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + E +F+SM+ E+GI G +HY + +L + G L A +FI++ LP +PT
Sbjct: 349 ACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDE-LPIKPT 406
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI------PTPPPKKRTAISIL 500
A W L + HGD+D+ E +++LD S I T ++ + L
Sbjct: 407 AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKL 466
Query: 501 DGKSRLVEFRNPTLYRDDEKL---------------------KALNQMKESTYVPDTRYV 539
+ +V+ + D + + + Q+K YVP+T +V
Sbjct: 467 MSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHV 526
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
H ++ +E K +L YHSE+LAI++GL++T T LRI+KNLRVC DCH+ K++S +
Sbjct: 527 FHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFN 586
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD RFHHF+DG CSCGDYW
Sbjct: 587 RRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ +M++GV D F +L + C + + E ++ H +++ + +I MY +C
Sbjct: 127 VRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC 186
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR +FD M + S++ MI + L E L LF +M+ GL+P T ++V
Sbjct: 187 GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVL 246
Query: 386 SACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
SAC A+E +IH M+ + + T L+ + KCG L +A
Sbjct: 247 SACALLGALELGRWIHDYIRKMRLDSLVKVNT----ALIDMYAKCGSLEDA 293
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 217/393 (55%), Gaps = 29/393 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPK-WYENAKKVHDYFLQSTIRGDLVLNNK 317
EG V+ +++ + +K + F + C P E K++H + ++S L +++
Sbjct: 89 EGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSA 148
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MY K G + A VF +R + SW+ +I+GYA +G G + L++FE+M++ L+ +
Sbjct: 149 LLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMD 208
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TF+ V SAC E +F+ M + I P EHY +V + G+ G L +A + I
Sbjct: 209 GVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEII 268
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------------- 478
+ +PF +A W L + IH ++++ A + ++ L P
Sbjct: 269 NE-MPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNW 327
Query: 479 -SKADPKKIPTPPPKKRTA-ISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKES 530
+A +K+ K+ A S ++ K++ F +P + KL+ L+ Q+K +
Sbjct: 328 KERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGA 387
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y PDT YV D+D+E KE L HSERLAIA+GLI TP TPL+I+KNLRVCGDCH+ I
Sbjct: 388 GYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVI 447
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S + GR+++VRD+ RFHHFK G CSCGDYW
Sbjct: 448 KLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++ Y K G++ +A +VF + ++ + +W MI GYA G + +++F QM K
Sbjct: 43 VGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEK 102
Query: 374 LQPNEQTFLAVFSACGSADA-IEEAF-IHFESMKSEF 408
++PNE TF + +AC + A +E+ +H S+KS F
Sbjct: 103 IKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRF 139
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 210/394 (53%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ E+ G+ D ++ C N E + H L S + + ++N
Sbjct: 353 CSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSN 412
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGKCGS+ DA R+FD M SW ++ GYA G E + LFE+M ++P
Sbjct: 413 ALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKP 472
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+ V SAC A +E+ +F SM+ + GI P +HY ++ + + G L EA++F
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEF 532
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKAD 482
I+Q +P P A W L + R+ GD+++ A E ++++DP +K +
Sbjct: 533 IKQ-MPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGN 591
Query: 483 PKKIP-------TPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
++ KK S + K+++ F +P EKL+ LN +M E
Sbjct: 592 WNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLE 651
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y PD VLHD+ K + +HSE+LAIA+GL+ P P+RI+KNLRVC DCHNA
Sbjct: 652 EGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNA 711
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I GR+++VRD RFH F +G CSCGD+W
Sbjct: 712 TKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ D F ++ CG E K++H Y +++ ++ + + +++MY KC S+
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A F M+ +++ SW +I GY NG +E +++F +M++ G+ P++ T +V S+C +
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
++EE F + + G HY+ LV + GKCG + +A + ++ L +
Sbjct: 386 LASLEEG-AQFHCL----ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQV 440
Query: 447 AEFWEALRN----YARIHGDIDL 465
+ W AL + R IDL
Sbjct: 441 S--WTALVTGYAQFGRAKETIDL 461
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V+ N +I +C + +ARR+F+ M DR +W M+ G+ NGL + L F +MR
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMR 264
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
G+ ++ TF ++ +ACG+ A+E+
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQG 291
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 199/388 (51%), Gaps = 38/388 (9%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ GV+ D + C + + VH + + + N ++ MY K G+
Sbjct: 140 MVAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAKTGA 199
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR VFD M R +W +I GYA NG G L+++ M + G +P+ TF+ + A
Sbjct: 200 LHDARAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLFA 259
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A ++ HF SM ++GI+PG +HY +V +LG+ G L EA + + E A
Sbjct: 260 CSHAGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRS-STELDA 318
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------------------ 483
W++L R+H + +L + A E++ LDP+ A P
Sbjct: 319 TVWKSLLGACRVHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALM 378
Query: 484 --KKIPTPPPKKRTAISILDGKSRLVEF------RNPTLYRDDEKLKALNQMKESTYVPD 535
+ I P + +G + L R +YR E++ +++ YVPD
Sbjct: 379 KARGITKEPGCSWVGV---NGVTHLFHVEDRGHPRAAEIYRKVEEMT--ERIRAEGYVPD 433
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T + L D E +E+ L YHSERLA+A+GL++ PA P+R+ KNLRVCGDCH AIK++++
Sbjct: 434 TDWALQDEAPEGRERGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAK 493
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR +I+RD FHH KDG+CSCGDYW
Sbjct: 494 AYGRVIILRDANCFHHMKDGECSCGDYW 521
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Query: 312 LVLNNKVIEMYGK---CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
L + N +++ Y + G AR VFD M R + +W ++ G A G ++ +
Sbjct: 80 LHVANALVDAYARLPCAGGAATARAVFDEMPRRDVVTWTSLLTGLARAGAHAAAVRAYHG 139
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M G+Q +E AV S+C + A++ +H ++ G+ P LV + K
Sbjct: 140 MVAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAV--HLGLCPFRSVGNSLVSMYAKT 197
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
G L +A+ + +P T + + YA
Sbjct: 198 GALHDARAVFDA-MPARCTITWTALIVGYA 226
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 223/398 (56%), Gaps = 43/398 (10%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDY----FLQSTIRGDLVL 314
KEA+ L K V+ + F ++ C + K +H Y FL T + L
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT---NTSL 403
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+I+MY KCG++ A++VF M +S+ SW+ MI+G A +G + L+LF QMR G
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+P++ TF+ V SAC A +E F SM ++ ISP +HY ++ +LG+ G LF+
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAG-LFDEA 522
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-------------- 480
+ + + + +P W +L R+HG+++L + A + + +L+P
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 481 ---ADPKKIPTP----PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALN 525
D +I T KK S ++ S + EF ++ +Y+ +++ L
Sbjct: 583 GRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQL- 641
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++++ +VPDT VL+D+D+E KE +L +HSE+LAIA+GLIST T +RI+KNLRVCG+
Sbjct: 642 -LEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGN 700
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH+AIK++S+I RE+I RD RFHHFKDG CSC DYW
Sbjct: 701 CHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMD 270
S+ + G+ + L++ + P D V A +A Q G+ +EA+ E+
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAV--SWNAMIAGYAQSGRFEEALAFFQEMKR 257
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
V + S T+ C E V + + +L L N +I+MY KCG +
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR +F+ + ++ + SW++MI GY+ E L LF +M++ ++PN+ TF+++ AC
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAY 377
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A++ +IH K G++ T + L+ + KCG++ A+Q P +
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIEAAKQVFAGMKP--KSLGS 434
Query: 450 WEALRNYARIHG 461
W A+ + +HG
Sbjct: 435 WNAMISGLAMHG 446
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G + + ++ GV+ ++ F L + C + K++H + L+ + D ++ +I
Sbjct: 115 GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLI 174
Query: 320 EMYGKCG-------------------------------SMTDARRVFDHMADRSMDSWHL 348
MY + G + DARR+F+ + R SW+
Sbjct: 175 NMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNA 234
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
MI GYA +G +E L F++M++ + PNE T + V SAC + ++E S +
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGN-WVRSWIEDH 293
Query: 409 GISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
G+ L+ + KCG L +A+ E
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFE 323
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 211/374 (56%), Gaps = 38/374 (10%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ +CG + + +H +++ + + +I +Y KCG + +A VF+ + R
Sbjct: 229 SVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR 288
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIH 400
++ W+ M+ A + D+ +LF++M+ +G ++ N TFL V AC A +E+ +
Sbjct: 289 NLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYY 348
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
FE MK ++GI PGT+HY +V +LG+ G L +A + IE+ +P EPT W AL R+H
Sbjct: 349 FELMK-DYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEE-MPMEPTESVWGALLTGCRLH 406
Query: 461 GDIDLEDHAEELMVDL----------------------DPSKADPKKIPTPPPKKRTAIS 498
G+ L + + + +L + +KA K + KK T +S
Sbjct: 407 GNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKA-RKMMRDRGIKKETGLS 465
Query: 499 ILDGKSRLVEF--------RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKE 549
++ +R+ F ++ +Y +KL L + M ++ YV DT +VL ++D E K
Sbjct: 466 WVEEGNRIHTFAAGDRSHAKSVEIY---DKLDELGEEMDKAGYVADTSFVLKEVDGEEKS 522
Query: 550 QALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF 609
+++ YHSERLAIA+G I+ P P+R++KNLRVCGDCH AIK +S+ GR +IVRDN RF
Sbjct: 523 RSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRF 582
Query: 610 HHFKDGKCSCGDYW 623
H F+DGKC+CGDYW
Sbjct: 583 HRFEDGKCTCGDYW 596
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +GV D F + + CG AK +H + L++ D+ + + VI+MY KCG
Sbjct: 112 MLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGD 171
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ----TFLA 383
+ A VFD M R++ SW +I GY G DE L+LF+ R L + NE T +
Sbjct: 172 ICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFK--RFLVEEENEGVNDFTLSS 229
Query: 384 VFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
V CG + ++ IH S K+ F S L+ + KCG + EA E+
Sbjct: 230 VLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVAS--SLISLYSKCGVVEEAYDVFEE 284
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + ++ ++ +L++ +I Y K + ++F +S +W +I+ +A N
Sbjct: 41 QLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQND 100
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH 416
L L F M + G+ P++ F + +CG ++ A +H ++K+ + + +
Sbjct: 101 LPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHL----DI 156
Query: 417 YLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
++G ++ + KCG + A ++ +P+ W L I+G + L + E L
Sbjct: 157 FVGSSVIDMYAKCGDICYAHNVFDE-MPYRNVVS-WSGL-----IYGYVQLGEDDESL 207
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 212/397 (53%), Gaps = 34/397 (8%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ E+ G+K D ++ C N E + H L S +R + ++N
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGKCGS+ DA R+FD M+ SW ++ GYA G E + LFE+M G++P
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKP 477
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF+ V SAC + +++ +F SM+ + I P +HY ++ + + G L +A++F
Sbjct: 478 DGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEF 537
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKAD 482
I+Q +P P A W L + R+ GD+++ A E ++ LDP SK +
Sbjct: 538 IKQ-MPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGE 596
Query: 483 PKKIPTP-------PPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKALN-Q 526
+ KK S + K+++ F + T+Y EKL+ LN +
Sbjct: 597 WNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIY---EKLQWLNSK 653
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M E Y PD VLHD+ K L +HSE+LAIA+GLI P P+RI+KNLRVC DC
Sbjct: 654 MVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDC 713
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNA K +S+I GR+++VRD RFH F +G CSCGD+W
Sbjct: 714 HNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G EA+++ + GV D F ++ CG E K++H Y ++ +
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDN 311
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +++MY KC S+ A VF M +++ SW MI GY NG G+E +++F +M++
Sbjct: 312 VFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQR 371
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++P++ T +V S+C + ++EE F + G+ P LV + GKCG +
Sbjct: 372 DGIKPDDFTLGSVISSCANLASLEEG-AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+A + ++ + F + + YA+ + D E+++
Sbjct: 431 DAHRLFDE-MSFHDQVSWTALVMGYAQFGKAKETIDLFEKML 471
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++V+ N +I +C + +AR +F+ + +R +W M+ G NGL E L +F +MR
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA 397
G+ ++ TF ++ +ACG+ A+EE
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEG 296
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 220/398 (55%), Gaps = 34/398 (8%)
Query: 258 QEGKVKEAIE---LMD--KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EAIE +M+ + +K + + ++ + + ++H + +++ + D+
Sbjct: 453 QNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDV 512
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I++YGKCG + DA +F + S W+ +I+ + +G G++ L+LF +M+
Sbjct: 513 FVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDE 572
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF+++ SAC + ++E F M+ E+GI P +HY +V +LG+ G L
Sbjct: 573 GVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEM 631
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------- 482
A FI + +P P A W AL RIHG+I+L A + + ++D
Sbjct: 632 AYDFI-KDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYA 690
Query: 483 -------PKKIPTPP----PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN- 525
K+ + KK S ++ R+ F +P +L+ L
Sbjct: 691 NVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTA 750
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+MK Y+PD +VL D++++ KE L HSERLAIA+G+ISTP ++ +RI KNLRVCGD
Sbjct: 751 KMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGD 810
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CHNA K +SRI RE++VRD+KRFHHFK+G CSCGDYW
Sbjct: 811 CHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTD 330
G++ D +L + + Y+N++ VH + ++ + +V+ N V++MY K G +
Sbjct: 369 GLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDS 428
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACG 389
A +VF+ + + + SW+ +I+GY NGL E ++++ M + ++ N+ T++++ +A
Sbjct: 429 AHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYA 488
Query: 390 SADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPT 446
A+++ IH +K+ + + ++G L+ + GKCG L +A Q +P E +
Sbjct: 489 HVGALQQGMRIHGHLIKTNLHL----DVFVGTCLIDLYGKCGRLVDAMCLFYQ-VPRESS 543
Query: 447 AEFWEALRNYARIHG 461
W A+ + IHG
Sbjct: 544 VP-WNAIISCHGIHG 557
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 258 QEGKVKEAIE-----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
+ G +EAI+ L+ +AD FYT + + + +K+H + + + D+
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQAD---FYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDV 207
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I MY + G + AR +FD M R M SW+ MI+G NG + L + ++MR
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 373 GLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL----GLVGVLGKC 427
G+ + T ++ C I A IH + I G E L L+ + K
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHL------YVIKHGLEFELFVSNALINMYAKF 321
Query: 428 GHLFEAQQFIEQ 439
G+L +AQ+ +Q
Sbjct: 322 GNLGDAQKVFQQ 333
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ L Q G +A++++D+ G+ D+ ++ +C A +H Y ++
Sbjct: 243 AMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKH 302
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +L ++N +I MY K G++ DA++VF M R + SW+ +I Y N F
Sbjct: 303 GLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF 362
Query: 367 EQMRKLGLQPNEQTFLAVFS 386
+M+ GL+P+ T +++ S
Sbjct: 363 FKMQLNGLEPDLLTLVSLAS 382
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +LF+ C AK++H + S ++ +++ +Y G ++ +R FD +
Sbjct: 79 FNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ 135
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF 398
+ + +W+ MI+ Y NG E + F Q+ + Q + TF V AC + ++
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT--LVDGRK 193
Query: 399 IHFESMKSEF----GISPGTEHYLGLVGVLGKCGHLFEAQQF 436
IH K F ++ H G +G LF+ F
Sbjct: 194 IHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPF 235
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 213/399 (53%), Gaps = 39/399 (9%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA+ L +GVK D F T + G + K H +S + D+
Sbjct: 716 QAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVS 775
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++++Y KCG + +A +F D ++ + +I A +G +E +++F +M++ G
Sbjct: 776 VATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEG 835
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ T +++ SACG A +EE F +MK FGISP EHY V +LG+ G L A
Sbjct: 836 VRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHA 895
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+Q I +K+PFE W +L ++ GD +L + + +++LDP
Sbjct: 896 EQII-RKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCA 954
Query: 479 ------SKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
+ D KK+ K +S + ++ EF + +Y +KL+ L
Sbjct: 955 TGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELL 1014
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
M+ + Y D D++ E KE+AL YHSER+AIA+GLI+TP T L+I+KNLRVCG
Sbjct: 1015 --MRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCG 1069
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A K +S ++GRE+IVRD+ RFHHF +G CSC D W
Sbjct: 1070 DCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV D T + C K +H + + D+ + N ++ MY CG +
Sbjct: 632 EGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWRE 691
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A F+ M R + SW++M YA GL E + LF QM+ G++P++ TF + G
Sbjct: 692 ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGG 751
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ + + + F ++ +E G+ GLV + KCG L EA
Sbjct: 752 SALVSDGKL-FHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSL 796
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV---LNNKVIEMYGK 324
++ G+ + F + C N + + +K+H L T R D V + ++ MYGK
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL--TRRRDYVESSVATMLVSMYGK 485
Query: 325 CGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
CGS+++A VF M RS+ +W++M+ YA N E +M + G+ P+ +F
Sbjct: 486 CGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFT 545
Query: 383 AVFSAC 388
+V S+C
Sbjct: 546 SVLSSC 551
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
AD + L + C + K H+ + + L L N +I MY +CGS+ +A +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACG-SAD 392
F M +R++ SW +I+ A G LF M + PN T +A+ +AC S D
Sbjct: 83 FSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142
Query: 393 AIEEAFIHFESMKSEFGI--SPGTEHYLG--LVGVLGKCGHLFEA 433
IH +M E G+ + T +G ++ + KCG L +A
Sbjct: 143 LAIGRSIH--AMIWELGLERASTTATLVGNAMINMYAKCGSLEDA 185
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMIN 351
+ A+ H +S D+V+ N +I MY KCG + A VF + + + SW+ M+
Sbjct: 351 FGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLG 410
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGI 410
D + + F M G+ PN+ +F+A+ +AC +++A++ IH +
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQ-QFIEQKLP 442
+ + LV + GKCG + EA+ F E LP
Sbjct: 471 VESSVATM-LVSMYGKCGSISEAELVFKEMPLP 502
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 281 YTLFEL---CGNPKWYENAKKVHDYF----LQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
YTL + C N + + +H L+ ++ N +I MY KCGS+ DA
Sbjct: 128 YTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIA 187
Query: 334 VFDHMADRSMDSWHLMINGYA-DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF + ++ + SW M YA + + L++F +M L PN TF+ AC S
Sbjct: 188 VFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR 247
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ ++H ++ G P + L+ + GKCG
Sbjct: 248 --DGTWLHSLLHEASLGFDPLASN--ALINMYGKCG 279
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T C + + + +H ++++ D + +N +I MYGKCG A VF MA
Sbjct: 236 FITALGACTSLR---DGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMA 292
Query: 340 DR---SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
R + SW+ MI+ + G + + +F ++R G++PN T + + +A ++
Sbjct: 293 SRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
A F E G ++ + KCG F A + +++ ++ W +
Sbjct: 353 AARGFHGRIWESGYLRDVVIGNAIISMYAKCG-FFSAAWAVFRRIRWKCDVISWNTM 408
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + KEA +E++ GV DA F ++ C + A+ + L+S R
Sbjct: 518 QNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGYRSA-C 573
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I M+G+C + AR VF+ M + SW M++ A+N E LF +M+ G
Sbjct: 574 LETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEG 633
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P++ T C ++ + IH + +E G+ L+ + CG E
Sbjct: 634 VIPDKFTLATTLDTCLASTTLGLGKVIH--ACVTEIGLEADIAVENALLNMYSNCGDWRE 691
Query: 433 AQQFIE 438
A F E
Sbjct: 692 ALSFFE 697
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 218/400 (54%), Gaps = 39/400 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ L + + + + F T+ +C N E +++ ++S+
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSF 253
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + ++ +Y KCG + A +VFD + R++ W+ M+ A + + ++LF++M+ G
Sbjct: 254 VGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSG 313
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TFL V +AC A ++E +F+ MK E I P +HY LV +LG+ G L EA
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGKYYFDLMK-ESRIEPTDKHYASLVDMLGRAGKLEEA 372
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ + +P +PT W AL IH + +L A + + +L P +
Sbjct: 373 LEIV-TNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAA 431
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
K + KK T +S ++ ++++ F R+ +Y EKL L
Sbjct: 432 DGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIY---EKLAEL 488
Query: 525 NQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+ M+++ YV DT YVL ++D + K Q + YHSERLAIA+GLI+ PA P+R++KNLRVC
Sbjct: 489 GEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVC 548
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCHNAIK MS R +IVRDN RFH F+DGKCSC DYW
Sbjct: 549 GDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG + K VH +++ D+ + + +++MY KCG + AR++FD M R++ +W
Sbjct: 126 CGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTW 185
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMK 405
M+ GYA G +E L LF++ L N+ +F V S C ++ +E I +K
Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIK 245
Query: 406 SEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
S F S ++G LV + KCG L A Q ++
Sbjct: 246 SSFDSSS----FVGSSLVSLYSKCGDLEGAYQVFDE 277
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H Y ++S + ++ N +I Y K D+RR F+ +S +W +I+ +A N
Sbjct: 36 QLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNE 95
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH 416
L L+ +M L+P++ + +CG + +H SMK+ + +
Sbjct: 96 LPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGY----DADV 151
Query: 417 YLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
++G LV + KCG + A++ ++ +P + + YA++
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDE-MPLRNVVTWSGMMYGYAQM 195
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 209/385 (54%), Gaps = 30/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+K + ++ C E + +HDY + + + +N +I+MY KCG
Sbjct: 229 EMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCG 288
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M R +W +M+ YA++G G E + +FE+M+K G++P++ TFL V
Sbjct: 289 SLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLY 348
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + E +F+SM+ E+GI G +HY + +L + G L A +FI++ LP +PT
Sbjct: 349 ACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDE-LPIKPT 406
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI------PTPPPKKRTAISIL 500
A W L + HGD+D+ E +++LD S I T ++ + L
Sbjct: 407 AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKL 466
Query: 501 DGKSRLVEFRNPTLYRDDEKL---------------------KALNQMKESTYVPDTRYV 539
+ +V+ + D + + + Q+K YVP+T +V
Sbjct: 467 MSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHV 526
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
H ++ +E K +L YHSE+LAI++GL++T T LRI+KNLRVC DCH+ K++S +
Sbjct: 527 FHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFN 586
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD RFHHF+DG CSCGDYW
Sbjct: 587 RRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ +M++GV D F +L + C + + E ++ H +++ + +I MY +C
Sbjct: 127 VRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC 186
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR +FD M + S++ MI + L E L LF +M+ GL+P T ++V
Sbjct: 187 GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVL 246
Query: 386 SACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
SAC A+E +IH M+ + + T L+ + KCG L +A
Sbjct: 247 SACALLGALELGRWIHDYIRKMRLDSLVKVNT----ALIDMYAKCGSLEDA 293
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 222/414 (53%), Gaps = 33/414 (7%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAI---ELMD-KGVKADASCFYTLFELCGNPKWYENAK 297
GD + + Q G +EA +LM+ +G+ AD + +L + C N +
Sbjct: 73 GDAKVVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGR 132
Query: 298 KVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K+H + + D+VL ++ MY KCG + +AR +FD + ++++ +W +I YA N
Sbjct: 133 KLHARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQN 192
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G L+LF +M + G + +E TF++V AC A +++A+ +F +MKSE + P H
Sbjct: 193 GDCSTALKLFWKMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTMKSERKLEPLPGH 252
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y +V +LG+ G L +A++ I Q++ + W L + HGD+ L + A E + +L
Sbjct: 253 YGCIVDLLGRAGRLADAEELI-QRMKAPQSGVLWTTLLGACKTHGDMKLAERAAERIREL 311
Query: 477 DPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF-----R 510
DP A P K++ KK S ++ + +L EF
Sbjct: 312 DPGSATPYVLLSNVYSEAGRWDLAASVRKRMDDMKVKKPAGKSWVEVRGKLHEFVAGDQS 371
Query: 511 NPTLYRDDEKLK-ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
+P + +LK L +KE+ Y D LH+ ++E KE L YHSE+LA+ GL+ +P
Sbjct: 372 HPKIGEIVLELKRLLALIKEAGYAADKSATLHNAEEEEKEGLLYYHSEKLAMVMGLLHSP 431
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P++++KNLRVC DCH A K +S++ R++++RD K+FHHF+ G+CSCGDYW
Sbjct: 432 RGEPVQVVKNLRVCSDCHTAAKFISKVEDRQIVLRDTKQFHHFEHGRCSCGDYW 485
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYAD 355
+K+H + D + N +++ Y KC S+ D ++VF M D + SW +I G
Sbjct: 30 RKIHASLEGCGFQADDHVKNTLMDFYTKCDSLDDVKKVFRSMGGDAKVVSWTCLIVGCVQ 89
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFG-ISPGT 414
G E F+ M G+ + T+ ++ AC + ++ + + +E G +
Sbjct: 90 LGSYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGR-KLHARIAELGLLEADV 148
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQ 439
++ + KCG L EA+ ++
Sbjct: 149 VLQTSILTMYSKCGRLGEARGIFDR 173
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 206/392 (52%), Gaps = 32/392 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA+ L ++ GVK D +L C + E K +H Y + I D+ L +
Sbjct: 190 EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTAL 249
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCGS+ A RVF M ++ + +W +I G A G G + L+LF +M+ ++P+
Sbjct: 250 VDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDA 309
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V +AC A + E +F SM +++GI P EHY +V +LG+ G + EA+ I
Sbjct: 310 ITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLI- 368
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
Q +P P L + RIHG++ + + A + +++LDP
Sbjct: 369 QNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWE 428
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLK-ALNQMKEST 531
+ I PP + + + + +P E L + ++K +
Sbjct: 429 AAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAG 488
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPD VL D+D++ KE L HSE+LAIA+GL+ST TP+R++KNLRVC DCH+A+K
Sbjct: 489 YVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMK 548
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S + RE+IVRD RFHHF G CSC D+W
Sbjct: 549 FISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 44/221 (19%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M +G+ D F +LF+ CG K++H + + D + N ++ MY CG
Sbjct: 69 MMLQGLDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125
Query: 328 MTDARRVFDHMADRSMDS--------------------------------WHLMINGYAD 355
+ AR+VFD M ++S+ S W++MING+ +
Sbjct: 126 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVE 185
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA---FIHFESMKSEFGISP 412
+ +E L LF +M+ G++ ++ T ++ AC A+E ++ E K E ++
Sbjct: 186 DSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL 245
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GT LV + KCG + E+ + Q++P E W AL
Sbjct: 246 GT----ALVDMYAKCGSI-ESAMRVFQEMP-EKDVMTWTAL 280
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GS+ AR VF+ + + + + + +I GY + L + + ++ M GL P+ TF ++F
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQKL 441
+CG E +H S K F ++ Y+ L+ + CG L A++ ++ +
Sbjct: 86 KSCGV--LCEGKQLHCHSTKLGF----ASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 137
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 211/385 (54%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ K +K + ++ C + K +H+Y + + +N +I+M+ KCG
Sbjct: 222 EMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCG 281
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA +F++M + +W MI YA++G + + +FE+MR +QP+E TFL + +
Sbjct: 282 SLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLN 341
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE +F M EFGI P +HY +V +LG+ GHL +A +FI+ KLP PT
Sbjct: 342 ACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFID-KLPISPT 400
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------------PP 490
W L H +++L + E +++LD S I +
Sbjct: 401 PMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKV 460
Query: 491 PKKRTAISILDGKSRLVE------FRNPTLYRDDEKL-KALNQM----KESTYVPDTRYV 539
K R A+ + S V F + KL +AL++M K + YVPDT V
Sbjct: 461 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMV 520
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
+H D+ + KE L YHSE+LAIA+GL++TP T +R++KNLRVC DCH+A K++S I G
Sbjct: 521 VHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFG 580
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++++RD +RFHHF+DGKCSC D+W
Sbjct: 581 RKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+++ + D F +L + C K E +++H ++ + ++ + +I MY +C
Sbjct: 120 VEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTEC 179
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ AR VFD + + + ++ MI GYA +E L LF +M+ L+PNE T L+V
Sbjct: 180 EDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVL 239
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
S+C +++ +IH + K G + L+ + KCG L +A E
Sbjct: 240 SSCALLGSLDLGKWIHEYAKKH--GFCKYVKVNTALIDMFAKCGSLDDAVSIFE 291
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 311 DLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
D+ N K+I + SM+ AR +FD M++ + ++ + GY+ + E LF
Sbjct: 61 DVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFV 120
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
++ + L P+ TF ++ AC A A+EE +H SMK G+ L+ + +
Sbjct: 121 EILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMK--LGVDDNVYVCPTLINMYTE 178
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYAR 458
C + A+ ++ + EP + A+ YAR
Sbjct: 179 CEDVDAARCVFDRIV--EPCVVCYNAMITGYAR 209
>gi|302754748|ref|XP_002960798.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
gi|300171737|gb|EFJ38337.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
Length = 481
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 216/411 (52%), Gaps = 35/411 (8%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFEL----CGNPKWYENAKKVHD 301
+P A +A E K KEAIEL +++ T+ + C N + + H
Sbjct: 73 IPAYTAMMAGYVNEKKPKEAIELYHALQQSNLPVTNTVLAIVLGACSNLVDSDEGRAAHY 132
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLG 359
++ ++ D V+ N V MY KCG + +AR VFD M R++D +W +I Y G
Sbjct: 133 TAIELGLQDDPVVQNAVATMYAKCGGLEEARAVFDAMEIRNVDALTWSSLIGVYGSQGKT 192
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG 419
DE L+L +M+ G+ + F + +C + EA F M+S++G+ PG EH+
Sbjct: 193 DESLRLARRMQHEGMILDGNCFANLIFSCANGRRDAEACRFFMDMRSDYGVVPGKEHFGC 252
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD---- 475
LV +G+ GHL +A+ I + +P +P W L A++HGD + E+M+
Sbjct: 253 LVDAVGRAGHLKDAEDLI-KAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIMMKMNPQ 311
Query: 476 LDPSKADPKKIPTPPPKKRTAISILD--------GKSRLV--------------EFRNPT 513
LDP + + R ++ GKS +
Sbjct: 312 LDPLGTGANRTAARWEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRSHIHTKE 371
Query: 514 LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 573
+Y + +++ + + KE Y+PDTRYVLHD+ ++ K + L YHSERLA+AYG I+TP +
Sbjct: 372 IYAEVDRITEICK-KEENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIATPPGSA 430
Query: 574 LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
LR+IKNLRVCGDCH K+ ++I+ RE+IVRDN+RFHHF KDG CSCGDYW
Sbjct: 431 LRVIKNLRVCGDCHTISKMWAKIMQREIIVRDNRRFHHFAKDGTCSCGDYW 481
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + F T+FE + E+ K++ + + ++ ++ M+ + S++DA
Sbjct: 5 GVWPNERTFLTIFE---RVRHIEDGKRLAEKVKEQQGLDLSIVGAALVTMFCRFSSVSDA 61
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS- 390
R FD + ++ + ++ M+ GY + E ++L+ +++ L V AC +
Sbjct: 62 RDAFDKIPEKGIPAYTAMMAGYVNEKKPKEAIELYHALQQSNLPVTNTVLAIVLGACSNL 121
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
D+ E H+ ++ E G+ + + KCG L EA+ + A W
Sbjct: 122 VDSDEGRAAHYTAI--ELGLQDDPVVQNAVATMYAKCGGLEEARAVFDAMEIRNVDALTW 179
Query: 451 EAL 453
+L
Sbjct: 180 SSL 182
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 211/395 (53%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK KEA+ L + G+K D + + C + + K +H Y + I D +L
Sbjct: 229 GKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + +A VF M ++ + W MI+GYA +G G E L+ F +M+ G++
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ TF + +AC A + EA + FESM+ G P EHY +V +LG+ G L EA++
Sbjct: 349 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------------- 482
IE +P +P A W AL N IHG+++L ++++ +DP
Sbjct: 409 LIEN-MPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAG 467
Query: 483 --------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMK 528
+++ K S++ EF +P + D L+ + +++
Sbjct: 468 EWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLR 527
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E Y P +L D++ + KE A+ +HSE+LA+ +GLIST +RI+KNLRVC DCH
Sbjct: 528 EEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHT 587
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S++ RE+++RD RFH FKDG C+CGDYW
Sbjct: 588 VIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V N +I+ Y KCG + A +F+HM +R++ SW MI+G G E L LF +M+
Sbjct: 183 DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ 242
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKC 427
G++ + ++ AC +++ +IH K E I P LG L+ + KC
Sbjct: 243 TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDP----ILGCVLIDMYAKC 298
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
G L EA + + E W A+ + IHG
Sbjct: 299 GDLEEAIEVFRKM--EEKGVSVWTAMISGYAIHG 330
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK--CGSMTDARRVFDHMAD 340
L + C N E +++H L++ + D + +K++ GS+ AR VFD +
Sbjct: 24 LLQRCSN---MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FI 399
+ W+ MI GY+++ +E L L+ M + N TF + AC S A EE I
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQI 140
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
H +K FG T + L+ V K G + A+ +Q
Sbjct: 141 HAHIIKMGFGSEIYTTN--SLLNVYSKSGDIKSARLLFDQ 178
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 216/397 (54%), Gaps = 33/397 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G K+AI E+++K V+ D + C E A+ + +Y +S R D+
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVF 359
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++ +I+M+ KCGS+ AR VFD DR + W MI GY +G E + L+ M + G
Sbjct: 360 ISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDG 419
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN+ TFL + AC + + E + F M ++ I+P +HY ++ +LG+ GHL +A
Sbjct: 420 VHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHKINPQQQHYACIIDLLGRAGHLDQA 478
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+ I + +P +P W AL + + H ++L +A + + +DPS
Sbjct: 479 YEVI-KCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAA 537
Query: 481 -------ADPK-KIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQ 526
A+ + ++ K S ++ + RL FR +P + +++ + ++
Sbjct: 538 ARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESR 597
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE +V + LHD++ E E+ L HSER+ IAYGLISTP T LRI KNLR C +C
Sbjct: 598 LKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNC 657
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K++S++VGRE++VRD RFHHFKDG CSCGDYW
Sbjct: 658 HAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 20/300 (6%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D+ F L + CG + + VH + D+ + N +I +Y KC + AR
Sbjct: 115 VSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCAR 174
Query: 333 RVFDH--MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
VF+ + +R++ SW +++ YA NG E L++F QMRK+ ++P+ ++V +A
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTC 234
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+E+ IH MK G+ + + L + KCG + A+ ++ P
Sbjct: 235 LQDLEQGRSIHASVMK--MGLETEPDLLISLNTMYAKCGQVATAKILFDKMK--SPNLIL 290
Query: 450 WEAL-RNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA-ISILDGKSRLV 507
W A+ YA+ D D E M++ D P I A + L+ +
Sbjct: 291 WNAMISGYAKNGFAKDAIDLFHE-MINKD---VRPDTISITSAISACAQVGSLEQARWMD 346
Query: 508 EFRNPTLYRDDEKLKA--LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
E+ + + YRDD + + ++ + V R V D+ +++ + + + YGL
Sbjct: 347 EYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF---DRTLDRDVVVWSA--MIVGYGL 401
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYEN 295
P ++ + A ++ Q G+ EA+E+ + VK D ++ + E
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQ 240
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++ + + L + MY KCG + A+ +FD M ++ W+ MI+GYA
Sbjct: 241 GRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-----FIHFESMKSEFGI 410
NG + + LF +M ++P+ + + SAC ++E+A ++ + + I
Sbjct: 301 NGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
S L+ + KCG + A+ ++ L + W A+ +HG
Sbjct: 361 SS------ALIDMFAKCGSVECARSVFDRTLDRDVVV--WSAMIVGYGLHG 403
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H L ++ L K+I G +T AR+VFD + + W+ +I GY+ N
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
+ L ++ +M+ + P+ TF + ACG ++ F+H + + F +
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPF-EPTAEFWEAL 453
+ GL+ + KC L A+ E LP E T W A+
Sbjct: 158 N--GLIALYAKCRRLGCARTVFE-GLPLPERTIVSWTAI 193
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 222/426 (52%), Gaps = 34/426 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLF 284
++N +++ A D V ++ ++ Q G ++A+ ++ G+ L
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAI--ISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALL 420
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C + ++ H Y + D + N +I+MY KCG +T +R +FD M +R +
Sbjct: 421 PACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDII 480
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
SW+ MI GY +GL E L LF++++ LGL+P++ T +AV SAC + + E F SM
Sbjct: 481 SWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSM 540
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
F I P HY+ +V +L + G+L EA FI Q++PF P W AL R H +I+
Sbjct: 541 SQNFNIKPRMAHYICMVDLLARAGNLDEAYTFI-QRMPFVPNVRIWGALLAACRTHKNIE 599
Query: 465 LEDHAEELMVDLDPSKA-----------------DPKKIPTPPP----KKRTAISILDGK 503
+ + + + L P D I + KK S ++
Sbjct: 600 MGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEIS 659
Query: 504 SRLVEF-----RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
+ F +P ++KL + L QMK+ Y D+ +VLHD+++E KEQ LLYHSE
Sbjct: 660 GVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSE 719
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
++AIA+G+++T + + + KNLR+C DCH+AIK ++ + RE+ VRD RFHHFKDG C
Sbjct: 720 KVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGIC 779
Query: 618 SCGDYW 623
+C D+W
Sbjct: 780 NCQDFW 785
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 224 QIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTL 283
+I N +N + G VL S++D L + L G+ + T+
Sbjct: 266 KIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDD-------MLCIYGLNPTPATLATM 318
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
C + KK+H + ++S + D + N +I MY KCG M +A D M +
Sbjct: 319 LRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDT 378
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
S+ +I+G NG ++ L +F QM+ G+ P +T +A+ AC A++
Sbjct: 379 VSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQ 430
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+ ++ GV ++S ++ G K +H Y++++ ++VL +++M
Sbjct: 195 IHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDM 254
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQT 380
Y KC + AR++F+ + ++ W MI GY + + L L++ M + GL P T
Sbjct: 255 YAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPAT 314
Query: 381 FLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ AC ++ +H +KS G+ T L+ + KCG + A F+++
Sbjct: 315 LATMLRACAQLTDLKRGKKLHCHMIKS--GMDLDTTVGNSLISMYAKCGIMDNAVGFLDE 372
Query: 440 KLP 442
+
Sbjct: 373 MIA 375
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ ++ GV F L + C + + + + +H + + DL ++ ++ MY KC
Sbjct: 96 LHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKC 155
Query: 326 GSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G + A+ +F+ ++ DR + +W+ MI ++ + L + + QM++ G+ PN T ++
Sbjct: 156 GHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVS 215
Query: 384 VFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ G A+A+ + IH +++ F + + L+ + KC LF A++
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQ--TALLDMYAKCHLLFYARKI 267
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR VFD + S+ W++MI YA +G + + L+ M +LG+ P TF + AC S
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
A++ IH + G+S L+ + KCGHL++AQ
Sbjct: 120 LQALQLGRLIHTHA--HILGLSMDLYVSTALLHMYAKCGHLYQAQTL 164
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 216/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + +EA+ L + V+ + ++ C E K VH Y + + ++
Sbjct: 298 QADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTII 357
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++ Y KCG + DA F+ M ++ +W +I G A NG G E L+LF MRK
Sbjct: 358 LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKAS 417
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P + TF+ V AC + +EE HF+SM ++GI P EHY +V +LG+ G + EA
Sbjct: 418 IEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEA 477
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
QFI + +P EP A W AL + +H ++++ + A + +V L+PS +
Sbjct: 478 YQFI-RTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYAS 536
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQ 526
K++ +K S+++ +VEF +P L +K++ +++
Sbjct: 537 VGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDR 596
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K + Y+P+T V ++D+ KE ++ +HSE+LAIA+GL+ +R+ KNLRVC DC
Sbjct: 597 IKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDC 656
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A K++S++ RE++VRD RFHHFKDG CSC DYW
Sbjct: 657 HSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+++ GV D ++ CG + K V +Y + + + L +I+MY KCG
Sbjct: 211 MLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGE 270
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ ARR+FD M R + +W MI+GY E L LF +M+ ++PN+ T ++V SA
Sbjct: 271 LGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSA 330
Query: 388 CGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
C A+E ++H + I GT LV KCG + +A + E +P +
Sbjct: 331 CAVLGALETGKWVHSYIRRKRLSLTIILGT----ALVDFYAKCGCIDDAVEAFES-MPVK 385
Query: 445 PTAEFWEAL 453
+ W AL
Sbjct: 386 NSWT-WTAL 393
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 266 IELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
+E++D V D + C + + + Y ++ + D + + +I MY
Sbjct: 107 VEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYAS 166
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
C + A+ +FD + + + W+ +I Y NG E +++F+ M ++G+ +E T ++V
Sbjct: 167 CRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSV 226
Query: 385 FSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ACG DA ++ E G+ L+ + KCG L +A++ +
Sbjct: 227 VTACGRIGDAKLGKWV--AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFD 279
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 201/383 (52%), Gaps = 36/383 (9%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D + + C + ++ H Y + D ++ N +I+MY KCG ++ A
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ M + SW+ MI GY +GLG E L LF + LGL+P++ TF+ + S+C +
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ E + F++M +F I P EH + +V +LG+ G + EA FI + +PFEP W
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI-RNMPFEPDVRIWS 586
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------------------D 482
AL + RIH +I+L + + + L P
Sbjct: 587 ALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWG 646
Query: 483 PKKIPTPPPKKRTAI--SILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVL 540
KKIP + I + + G ++ + R E+L L +MK Y + +V
Sbjct: 647 LKKIPGCSWIEINGIVHAFVGGDQSHLQLSQ--INRKLEEL--LVEMKRLGYQAECSFVF 702
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D+++E KEQ LLYHSE+LAIA+G+++ A P+ + KNLRVCGDCH AIK M+ I RE
Sbjct: 703 QDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKRE 762
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+ VRD RFHHFK+G C+CGD+W
Sbjct: 763 ITVRDANRFHHFKNGTCNCGDFW 785
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L E C K AKK+H +FL++T D + +K+ +Y C + ARR+FD + + S
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ W+ +I YA NG D + L+ M LG++PN+ T+ V AC AIE+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG-VEIH 132
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S FG+ LV KCG L EAQ+ + A W A+ ++G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA--WNAMIAGCSLYG- 189
Query: 463 IDLEDHAEELMVDLDPSKADP 483
L D A +L++ + P
Sbjct: 190 --LCDDAVQLIMQMQEEGICP 208
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 262 VKEAIELMDKGVKADA-----SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
+KEA+EL D+ + DA ++ C +K+H Y ++ D++L N
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGN 351
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG + DA R FD M + S+ +++G NG L +F M+ G+ P
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ T L V AC A++ F + G + T L+ + KCG + A++
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAREV 470
Query: 437 IEQKLPFEPTAEFWEALRNYARIHG 461
+ + + W A+ IHG
Sbjct: 471 FNRMDRHDIVS--WNAMIIGYGIHG 493
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+G + ++ GV+ + + + + C E+ ++H + + D+ + +
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTAL 150
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++ Y KCG + +A+R+F M+ R + +W+ MI G + GL D+ +QL QM++ G+ PN
Sbjct: 151 VDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS 210
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQ 435
T + V G A A+ +H ++ F G+ GT GL+ + KC L A++
Sbjct: 211 STIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT----GLLDMYAKCQCLLYARK 266
Query: 436 FIE 438
+
Sbjct: 267 IFD 269
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 9/191 (4%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC + V+ +++ ++G+ ++S + G K + K +H Y ++ + +V+
Sbjct: 190 LCDDA-VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGL 374
+++MY KC + AR++FD M R+ SW MI GY + E L+LF+QM K +
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAM 308
Query: 375 QPNEQTFLAVFSACGSADAIEEA---FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
P T +V AC + + + S I G L+ + KCG +
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT----LLSMYAKCGVID 364
Query: 432 EAQQFIEQKLP 442
+A +F ++ P
Sbjct: 365 DAIRFFDEMNP 375
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 211/395 (53%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK KEA+ L + G+K D + + C + + K +H Y + I D +L
Sbjct: 229 GKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + +A VF M ++ + W MI+GYA +G G E L+ F +M+ G++
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ TF + +AC A + EA + FESM+ G P EHY +V +LG+ G L EA++
Sbjct: 349 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------------- 482
IE +P +P A W AL N IHG+++L ++++ +DP
Sbjct: 409 LIEN-MPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAG 467
Query: 483 --------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMK 528
+++ K S++ EF +P + D L+ + +++
Sbjct: 468 EWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLR 527
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E Y P +L D++ + KE A+ +HSE+LA+ +GLIST +RI+KNLRVC DCH
Sbjct: 528 EEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHT 587
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S++ RE+++RD RFH FKDG C+CGDYW
Sbjct: 588 VIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V N +I+ Y KCG + A +F+HM +R++ SW MI+G G E L LF +M+
Sbjct: 183 DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ 242
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKC 427
G++ + ++ AC +++ +IH K E I P LG L+ + KC
Sbjct: 243 TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDP----ILGCVLIDMYAKC 298
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
G L EA + + E W A+ + IHG
Sbjct: 299 GDLEEAIEVFRKM--EEKGVSVWTAMISGYAIHG 330
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK--CGSMTDARRVFDHMAD 340
L + C N E +++H L++ + D + +K++ GS+ AR VFD +
Sbjct: 24 LLQRCSN---MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FI 399
+ W+ MI GY+++ +E L L+ M + N TF + AC S A+EE I
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
H +K FG T + L+ V K G + A+ +Q
Sbjct: 141 HAHIIKMGFGSEIYTTN--SLLNVYSKSGDIKSARLLFDQ 178
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 211/385 (54%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ K +K + ++ C + K +H Y + + + +N +I+M+ KCG
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA +F+ M + +W MI YA++G ++ + +FE+MR +QP+E TFL + +
Sbjct: 280 SLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE +F M S+FGI P +HY +V +L + G+L +A +FI+ KLP PT
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID-KLPISPT 398
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------------PP 490
W L H ++DL + E + +LD S I +
Sbjct: 399 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
Query: 491 PKKRTAISILDGKSRLVE------FRNPTLYRDDEKL-KALNQM----KESTYVPDTRYV 539
K R A+ + S V F + KL +AL++M K S YVPDT V
Sbjct: 459 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 518
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
+H +++ + KE L YHSE+LAI +GL++TP T +R++KNLRVC DCHNA K++S I G
Sbjct: 519 VHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFG 578
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++++RD +RFHHF+DGKCSCGD+W
Sbjct: 579 RKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+++ G+ D F +L + C K E +++H ++ + ++ + +I MY +C
Sbjct: 118 VEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC 177
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ AR VFD + + + ++ MI GYA +E L LF +M+ L+PNE T L+V
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
S+C +++ +IH + K F + L+ + KCG L +A E K+ ++
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSF--CKYVKVNTALIDMFAKCGSLDDAVSIFE-KMRYK 294
Query: 445 PTAEFWEALRNYARIHG 461
T + + YA HG
Sbjct: 295 DTQAWSAMIVAYAN-HG 310
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
SM+ AR +F+ M++ + ++ M GY+ E LF ++ + G+ P+ TF ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC A A+EE +H SMK G+ L+ + +C + A+ ++ + E
Sbjct: 137 KACAVAKALEEGRQLHCLSMK--LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV--E 192
Query: 445 PTAEFWEAL-RNYAR 458
P + A+ YAR
Sbjct: 193 PCVVCYNAMITGYAR 207
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 214/370 (57%), Gaps = 19/370 (5%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K ++ T+ C K++H Y ++ + D+ + + +++MY KCG + +R
Sbjct: 505 LKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSR 564
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-----LQPNEQTFLAVFSA 387
VF+ M+ R++ +W+++I Y +G G+E L+LF +M + G ++PNE T++A+F++
Sbjct: 565 TVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFAS 624
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ ++E F +MK++ GI P ++HY LV +LG+ G + EA I+
Sbjct: 625 LSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKV 684
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD--------PKKIPTPPPKKRTAISI 499
+ W +L +IH ++++ + A + + LDP+ D +K+ +K S
Sbjct: 685 DAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSMLGRKMKEKGVRKEPGCSW 744
Query: 500 LDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALL 553
++ + +F +P E L+ L+ +MK+ YVPDT VLH++ +E KE L
Sbjct: 745 IEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLC 804
Query: 554 YHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFK 613
HSERLAIA+GL++T T +R+ KNLRVC DCH A K +S+IV RE+I+RD +RFHHF+
Sbjct: 805 GHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFR 864
Query: 614 DGKCSCGDYW 623
+G CSCGDYW
Sbjct: 865 NGTCSCGDYW 874
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q + +EA+ ++ GV+ + ++ C + + K++H + L +
Sbjct: 259 ISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVL---M 315
Query: 309 RGDLVLNNKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
DL+ N+ V ++MY C R VFD M R++ W+ MI GY N E ++
Sbjct: 316 NNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIE 375
Query: 365 LFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
LF +M +LGL PN T +V AC E+F+ E + S
Sbjct: 376 LFVEMVFELGLSPNSVTLSSVLPACVRC----ESFLDKEGIHS 414
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 30/202 (14%)
Query: 264 EAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EAIEL + G+ ++ ++ C + + + + +H ++ D + N +
Sbjct: 372 EAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNAL 431
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK------- 371
++MY + G + AR +F M + + SW+ MI GY G D+ L L M++
Sbjct: 432 MDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRI 491
Query: 372 -----------LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHY 417
L+PN T + V C + A+ + IH ++K ++ G+
Sbjct: 492 NTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGS--- 548
Query: 418 LGLVGVLGKCGHLFEAQQFIEQ 439
LV + KCG L ++ EQ
Sbjct: 549 -ALVDMYAKCGCLNLSRTVFEQ 569
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 296 AKKVHDYFLQSTIRGD--LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
K+VH + L++ GD NN ++ MY K G + +A+ +FD D+ + SW+ +I+
Sbjct: 206 GKQVHAFVLRN---GDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSL 262
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ N +E L M + G++PN T +V AC
Sbjct: 263 SQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC 297
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MYGKCG + ARRVFD + +R SW+ MIN + + LF M +
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 376 PNEQTFLAVFSAC 388
P T ++V AC
Sbjct: 184 PTSFTLVSVAHAC 196
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 218/394 (55%), Gaps = 36/394 (9%)
Query: 263 KEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ E++ GV+ F ++ C + + K +H Y ++ L+ +
Sbjct: 344 KEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSL 403
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I++Y KCG++ AR+VFD M +S+ SW+ MI G A +G D+ +LF +M G++PNE
Sbjct: 404 IDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNE 463
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + SAC A ++ F SM ++ ISP ++HY ++ +LG+ G LFE + +
Sbjct: 464 ITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAG-LFEEAESLL 522
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------A 481
Q + +P W +L R HG ++L + E + +L+P
Sbjct: 523 QNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWD 582
Query: 482 DPKKIPTP----PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
D +I T KK + ++ + + EF ++ +YR E++ Q+K
Sbjct: 583 DVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVD--EQLKV 640
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+V DT VL+D+D+E KE AL +HSE+LAIA+GLIST TP+RIIKNLRVC +CH+A
Sbjct: 641 FGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSA 700
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I RE+I RD RFHHFKDG CSC DYW
Sbjct: 701 TKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 14/277 (5%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ + ++ ++ P D V A +A Q G+ KEA+ L + K
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVV--SWNAMIAGYAQMGRSKEALLLFEDMRK 254
Query: 275 ADA----SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
A+ S ++ C + + + + +L L N +I+MY KCG +
Sbjct: 255 ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQT 314
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR +FD M +R + SW++MI GY E L LF +M G++P E TFL++ +C
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAH 374
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
AI+ +IH + F S T L+ + KCG++ A+Q + + + A
Sbjct: 375 LGAIDLGKWIH-AYINKNFN-SVSTSLSTSLIDLYAKCGNIVAARQVFD-GMKIKSLAS- 430
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W A+ +HG D A EL + +P +I
Sbjct: 431 WNAMICGLAMHGQ---ADKAFELFSKMSSDGIEPNEI 464
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
L S A LA EGK A ++ G +D +L + NA+ V D Q
Sbjct: 135 LLKSCAKLAS-AHEGKQIHA-HVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFD---Q 189
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
S R D + +I Y G M AR++FD M + + SW+ MI GYA G E L L
Sbjct: 190 SNFR-DAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLL 248
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF---GISPGTEHYLGLVG 422
FE MRK + PNE T ++V SAC ++A++ SM+S G+ + L+
Sbjct: 249 FEDMRKANVPPNESTIVSVLSACAQSNALDLG----NSMRSWIEDRGLCSNLKLVNALID 304
Query: 423 VLGKCGHLFEAQQFIEQKL 441
+ KCG L A++ + L
Sbjct: 305 MYSKCGDLQTARELFDDML 323
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 218/385 (56%), Gaps = 31/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M KG + D+ F T+ C + E +VH +++ + D+V+ + +++MY KCG
Sbjct: 531 MMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGR 590
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A R F+ M R++ SW+ MI+GYA +G G++ L+LF +M G P+ TF+ V SA
Sbjct: 591 IDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSA 650
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C +EE F HF+SM + +SP EH+ +V +LG+ G L E FI +P +P
Sbjct: 651 CSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI-NSMPMKPNV 709
Query: 448 EFWE-ALRNYARIHG-DIDLEDHAEELMVDLDPSKA-----------------DPKKIPT 488
W L R +G + +L A E++++L+P A D K T
Sbjct: 710 LIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKART 769
Query: 489 ----PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRY 538
KK S + K + F +P +KL+ LN +M+++ Y+P T+Y
Sbjct: 770 AMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKY 829
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
L D++ E KE+ L YHSE++A+A+ L A P+RI+KNLRVCGDCH+A +S+IVG
Sbjct: 830 ALFDLELENKEELLSYHSEKIAVAFVLTRQSA-LPIRIMKNLRVCGDCHSAFGYISKIVG 888
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++++RD+ RFHHF+DGKCSCGDYW
Sbjct: 889 RQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 21/249 (8%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
VK +++M G F + + +E + ++H L+ + D + N ++
Sbjct: 423 VKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSC 482
Query: 322 YGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
YGKCG M + ++F M++ R SW+ MI+GY N L + + L M + G + + T
Sbjct: 483 YGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFT 542
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
F + SAC S +E +H +++ E + G+ LV + KCG + A +F
Sbjct: 543 FATILSACASVATLERGMEVHACGIRACLESDVVVGS----ALVDMYSKCGRIDYASRFF 598
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAI 497
E +P + + YAR HG H E+ + D + PP T +
Sbjct: 599 EL-MPLRNVYSWNSMISGYAR-HG------HGEKALKLFTRMMLDGQ-----PPDHVTFV 645
Query: 498 SILDGKSRL 506
+L S +
Sbjct: 646 GVLSACSHV 654
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E A+++H ++ G+L L+N +I +Y + G + A+++FD M++R++ +W +I+GY
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG DE F M + G PN F + AC
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 210
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKC-GSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++H ++ D+V+ N +I MYG C S DAR VFD + R+ SW+ +I+ Y+
Sbjct: 223 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRR 282
Query: 357 GLGDEGLQLFEQMRKLGL----QPNE 378
G LF M+K GL +PN+
Sbjct: 283 GDAVSAYDLFSSMQKEGLGFSFKPND 308
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 296 AKKVHDYFLQSTIRGDLV-LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
++VH + +++ + + V + N ++ MY K G++ DA VF+ M ++ SW+ +I+G
Sbjct: 323 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 382
Query: 355 DNGLGDEGLQLFE--------------------------------QMRKLGLQPNEQTFL 382
N ++ ++F QM + G + TF+
Sbjct: 383 QNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFI 442
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ SA S ++ E ++ ++ +S T L+ GKCG + E ++ +
Sbjct: 443 NILSAVSSL-SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 498
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 211/394 (53%), Gaps = 34/394 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNK 317
KEA+EL + G++ D F + C P E+ + +H + + + L N
Sbjct: 287 KEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENV 346
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MYGKCGS+ DA +F M+ + +W+ MI Y +G E L+ +E M++ G+ P+
Sbjct: 347 ILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPD 406
Query: 378 EQTFLAVFSA-CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ T+++V A C +A EEA +F SM+ + G+ PG HY +V LGK G L +A+
Sbjct: 407 DYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETL 466
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADP-- 483
I Q +PFEP W + R HGD+ A + + +DP AD
Sbjct: 467 I-QCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGD 525
Query: 484 --------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
K + +K SI+ + + EF NP ++LK L+ +MK
Sbjct: 526 FQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKS 585
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ Y PD +V HD++ KE L HSERLAIA+G+IST TPLRI+KNLRVCGDCH
Sbjct: 586 AGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTM 645
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K+ S+I RE+IVRD+ RFHHFK+G CSC D+W
Sbjct: 646 TKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q G++ AI+ + K AD + + C +++H + + D+ ++N
Sbjct: 15 QLGQIAAAIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNH 74
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MYGKCGS+ +AR VF+ +++ SW ++I A +G E L LF +M K G+QP+
Sbjct: 75 LVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPH 134
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+F A +AC + A ++ +G LV + KCG L E+ +
Sbjct: 135 SVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTF 194
Query: 438 EQKLPFEPTAEFWEAL 453
E EP A W A+
Sbjct: 195 ESMT--EPNAVSWNAM 208
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 294 ENAKKVHDYFLQSTIRG--DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN 351
E + + FL+ IR D+V+ ++ MY KC + DA F + + ++ +W+++I+
Sbjct: 220 EALRTLQKMFLEG-IRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLIS 278
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGIS 411
Y + E ++LF +M LGL+ +E TF+ + AC A+E+ ++
Sbjct: 279 AYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREH---- 334
Query: 412 PGTEHYLGLVGVL----GKCGHLFEAQQFIE 438
P ++ L V+ GKCG L +A+ +
Sbjct: 335 PLASNHAPLENVILNMYGKCGSLQDAEAMFK 365
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 253 LARLC-QEGKVKEAI----ELMDKGVKADASCFYTLFELC-GNPKWYENAKKVHDYFLQS 306
L +C Q G+ +EA+ E++ +G++ + F C P++ + +H +
Sbjct: 106 LITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRY 165
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +V ++ MY KCGS+ ++ R F+ M + + SW+ MI +A++ G E L+
Sbjct: 166 GFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTL 225
Query: 367 EQMRKLGLQPNE-----QTFLAVFSACGSADAIEEAFIHFE 402
++M G++ T + +++ C AF+ +
Sbjct: 226 QKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQ 266
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 210/389 (53%), Gaps = 35/389 (8%)
Query: 270 DKGV--KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
D GV K ++ T+ C K++H Y ++ + D+ + + +++MY KCG
Sbjct: 747 DGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGC 806
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG------LQPNEQTF 381
+ A RVFD M R++ +W+++I Y +G G+E L+LF M G ++PNE T+
Sbjct: 807 LNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTY 866
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+A+F+AC + ++E F +MK+ G+ P +HY LV +LG+ G + EA + I
Sbjct: 867 IAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMP 926
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------------------- 482
+ W +L RIH ++ + A + + L+P+ A
Sbjct: 927 SNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQAL 986
Query: 483 --PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVP 534
KK+ +K S ++ + +F +P E L+ L+Q M++ YVP
Sbjct: 987 GVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVP 1046
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
D VLH++D E KE L HSERLAIA+GL++TP T +R+ KNLRVC DCH A KI+S
Sbjct: 1047 DISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIIS 1106
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+IV RE+I+RD +RFHHF +G CSCGDYW
Sbjct: 1107 KIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
+A+ F ++ C K + + + +H Y ++ D + N +++MY + G + ++ +F
Sbjct: 636 NATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIF 695
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK------------------LGLQPN 377
M R + SW+ MI G G D+ L L +M++ + +PN
Sbjct: 696 GRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPN 755
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T + V C + A+ + IH ++K + + LV + KCG L A +
Sbjct: 756 SVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGS--ALVDMYAKCGCLNLASRV 813
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA 496
+Q +P W L +HG + A EL + +++ P A
Sbjct: 814 FDQ-MPIRNVIT-WNVLIMAYGMHGK---GEEALELFRIMTAGGGSNREVIRPNEVTYIA 868
Query: 497 ISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
I S +V DE L + MK S V D A LL S
Sbjct: 869 IFAACSHSGMV----------DEGLHLFHTMKASHGVEPRG------DHYACLVDLLGRS 912
Query: 557 ERLAIAYGLIST 568
R+ AY LI+T
Sbjct: 913 GRVKEAYELINT 924
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q + +EA+ ++ GV+ D ++ C + +++H Y L++
Sbjct: 506 ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRN-- 563
Query: 309 RGDLVLNNKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
GDL+ N+ V ++MY C R VFD + R++ W+ ++ GYA N D+ L+
Sbjct: 564 -GDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALR 622
Query: 365 LF-EQMRKLGLQPNEQTFLAVFSACGSADAI-EEAFIHFESMKSEFG 409
LF E + + PN TF +V AC ++ IH +K FG
Sbjct: 623 LFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFG 669
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 290 PKWYENAKKVHDYFLQSTIRG-----------DLVLNNKVIEMYGKCGSMTDARRVFDHM 338
P + A VHD L I + + N ++ MYGKCG +T AR+VFD +
Sbjct: 334 PAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDI 393
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
DR SW+ MI + L LF M + P T ++V AC
Sbjct: 394 PDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHAC 443
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 296 AKKVHDYFLQSTIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
K+VH Y L++ GDL NN ++ MY + G + DA+ +F + + SW+ +I+
Sbjct: 453 GKQVHAYTLRN---GDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSL 509
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ N +E L M G++P+ T +V AC
Sbjct: 510 SQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPAC 544
>gi|302780141|ref|XP_002971845.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
gi|300160144|gb|EFJ26762.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
Length = 383
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 209/381 (54%), Gaps = 29/381 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMT 329
+G+ AD + +L + C N +K+H + + D+VL ++ MY KCG +
Sbjct: 4 QGIHADTVTYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCGRLG 63
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+AR +FD + ++++ +W +I YA NG L+LF +M + G + +E TF++V AC
Sbjct: 64 EARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVSVLYACS 123
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A +++A+ +F +M SE + P HY +V +LG+ G L +A++ I Q++ +
Sbjct: 124 HAGLVDDAYYYFTTMMSERKLEPLPGHYGCIVDLLGRAGRLADAEELI-QRMKAPHSGVL 182
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPT 488
W L + HGD+ L + A E + +LDP A P K++
Sbjct: 183 WTTLLGACKTHGDMMLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAASVRKRMDN 242
Query: 489 PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVLHD 542
KK S ++ + +L EF +P + +LK L +KE+ Y D LH+
Sbjct: 243 MKVKKPAGKSWVEVRGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKSATLHN 302
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
++E KE L YHSE+LAI GL+ +P P++++KNLRVC DCH A K +S++V R+++
Sbjct: 303 AEEEEKEGLLYYHSEKLAIVMGLLHSPRGEPVQVVKNLRVCSDCHAAAKFISKVVDRQIV 362
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD K+FHHF+ G+CSCGDYW
Sbjct: 363 LRDTKQFHHFEHGRCSCGDYW 383
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 213/394 (54%), Gaps = 29/394 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K +E+ + ADA+ + ++ C + K++H + + S ++ +
Sbjct: 482 HEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA 541
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++MY KCGS+ DA ++F M R+ SW+ +I+ YA NG GD L+LFE+M + GLQP+
Sbjct: 542 LVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPD 601
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ L++ AC +EE +F+SM + + P EHY + +L + G EA++ +
Sbjct: 602 SVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLM 661
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL--------------------- 476
Q +PFEP W ++ N IH + +L A + ++
Sbjct: 662 AQ-MPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGE 720
Query: 477 -DPSKADPKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ-MKE 529
D K + KK A S ++ K + F +P + +KL L + M +
Sbjct: 721 WDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVK 780
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y PD+ LH++D+E K ++L YHSER+AIA+ LISTP +P+ ++KNLR C DCH A
Sbjct: 781 KGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAA 840
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S+IV RE+ VRD+ RFHHF+DG C+C DYW
Sbjct: 841 IKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+VKE++EL + G F TL + + +++H + + ++++
Sbjct: 379 GRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVG 438
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +++MY KCG +A R+F +A +S W MI+ Y GL ++GL+LF +M++ +
Sbjct: 439 NSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIG 498
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFE 432
+ T+ ++ AC S ++ +H + S + + G+ LV + KCG + +
Sbjct: 499 ADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGS----ALVDMYAKCGSIKD 554
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
A Q Q++P + W AL + +GD D E MV
Sbjct: 555 ALQMF-QEMPVRNSVS-WNALISAYAQNGDGDCTLRLFEEMV 594
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE+ G+ D TL ++VH + ++ LV++N +++ Y K
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
S+ A ++F+ + +R +++ ++ GY+ G E + LF +M+++G +P E TF A+
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL 306
Query: 386 SACGSADAIE 395
+A D IE
Sbjct: 307 TAGIQLDDIE 316
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG-----------DLVLNNKVIEMYG 323
DAS T F NP Y + V + + + G ++ N +I Y
Sbjct: 88 VDASIIKTGF----NPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYI 143
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K G++++AR +FD M R+ +W ++I GYA N E LF +M + G+ P+ +
Sbjct: 144 KSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLAT 203
Query: 384 VFSACGSADAIEEA 397
+ S D++ E
Sbjct: 204 LLSGFTEFDSVNEV 217
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+EG +EAI L K G + F + E ++VH + ++ ++
Sbjct: 276 KEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVF 335
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++ Y K + +A ++F M + S+++++ YA NG E L+LF++++ G
Sbjct: 336 VANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTG 395
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
F + S + ++ IH +++ ++ +E +G LV + KCG
Sbjct: 396 FDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD----AISEILVGNSLVDMYAKCGEF 451
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYAR--IHGD 462
EA + I L + + + + +Y + +H D
Sbjct: 452 GEANR-IFSDLAIQSSVPWTAMISSYVQKGLHED 484
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 213/407 (52%), Gaps = 42/407 (10%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R ++G+ +E +LM GV+ + F + C + K+VH Y + +
Sbjct: 293 IHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGY 352
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++ MY KCG+ ARRVF+ M + SW +I GYA NG DE L FE
Sbjct: 353 DPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFEL 412
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + G +P++ T++ V SAC A +++ +F S+K + G+ +HY ++ +L + G
Sbjct: 413 LLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 472
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
EA+ I+ +P +P W +L RIHG+++L A + + +++P
Sbjct: 473 RFKEAENIIDN-MPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLA 531
Query: 479 ----------------SKADPKKIPTPPPK-----KRTAISILDGKSRLVEFRNPTLYRD 517
D I P K KR L G + +P
Sbjct: 532 NIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTS-----HPKTSDI 586
Query: 518 DEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
E L L++ +KE YVPDT +VLHD+++E KEQ L+YHSE+LA+ +G+ISTP TP+++
Sbjct: 587 HEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKV 646
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR C DCH AIK +S+IV R++ VRD+ RFH F+DG CSC DYW
Sbjct: 647 FKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ + D V+ + ++++YGKCGS+ +AR +FD M DR + SW MI+ +
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFE 298
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGISP 412
+G +EG LF + + G++PNE TF V +AC AD E +H M + G P
Sbjct: 299 DGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC--ADHAAEHLGKEVHGYMMHA--GYDP 354
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G+ LV + KCG+ A++ + +P W +L
Sbjct: 355 GSFAISALVHMYSKCGNTRVARRVFNEM--HQPDLVSWTSL 393
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 256 LCQEGKVKEAIELMDKGV-KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
LCQ+ +VKEA+EL+ + + A + TL C + E ++VH + S + +
Sbjct: 65 LCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFI 124
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+N++++MY KCGS+ DA+ +FD M R + SW+ MI GYA G ++ +LF++M
Sbjct: 125 SNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM 179
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 224/418 (53%), Gaps = 36/418 (8%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKW 292
++ GD ++ S+ + Q + A+EL + G A+ + ++ C
Sbjct: 218 DEMVTGDAIVWNSI--IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
E + H + ++ DL+LNN +++MY KCGS+ DA RVF+ M +R + +W MI+G
Sbjct: 276 LELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
A NG E L+LFE+M+ G +PN T + V AC A +E+ + +F SMK +GI P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
EHY ++ +LGK G L +A + + + + EP A W L R+ ++ L ++A +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNE-MECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452
Query: 473 MVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF-- 509
++ LDP A ++ KK S ++ ++ F
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512
Query: 510 ---RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
+P + +KL + ++++ YVP+T +VL D++ E E +L +HSE+LA+A+GL
Sbjct: 513 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 572
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ P +RI KNLR+CGDCH K+ S++ R +++RD R+HHF+DGKCSCGDYW
Sbjct: 573 MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ + +H ++ + D+ + + +I+++ K G DA VFD M W+ +I G+A
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---EAFIHFESMKSEFGIS 411
N D L+LF++M++ G + T +V AC +E +A +H + ++
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 296
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + KCG L +A + Q
Sbjct: 297 N------ALVDMYCKCGSLEDALRVFNQ 318
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKK 298
DQ L S + RLC + + A++ MD G+ AD++ + L + C + +
Sbjct: 25 DQTLLLS--EFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNL 82
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+ + + R + L N +I MY K + DA ++FD M R++ SW MI+ Y+ +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADA 393
+ L+L M + ++PN T+ +V +C G +D
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 215/402 (53%), Gaps = 29/402 (7%)
Query: 250 VADLARLCQE-GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ ARL Q G V ++ GV D ++ C + E K + Y + +
Sbjct: 183 IGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERV 242
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ L+N +++M+ KCG + A +F +M+ R++ SW +I G A +G G E + LFE+
Sbjct: 243 LKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEE 302
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+ G+ P + F+ + SAC + +E +F M +FGI P EHY +V +L + G
Sbjct: 303 MKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAG 362
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+ EA +F+E ++P EP W L + R+HG++ L + + ++ +P + +
Sbjct: 363 LVTEALEFVE-RMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLS 421
Query: 489 ------PPPKKRTAISILDGKSRLVEFRNPTLYRDD-----------------EKLKALN 525
+K++ I + GK + + T+ D E +K +N
Sbjct: 422 NIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVN 481
Query: 526 QM----KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+M K + Y P T V DID+E KE AL HSE+LAIA+ L++TP +P+RI KNLR
Sbjct: 482 EMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLR 541
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCH+A K +S+I RE+++RD RFHHF+DG+CSCGD+W
Sbjct: 542 VCGDCHSASKFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC-G 326
++ G+ + F + + C + K VH ++ D+ + N ++ MY C G
Sbjct: 100 MLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSG 159
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M AR++FD M +W MI GYA G + LF +M+ G+ P++ T ++V S
Sbjct: 160 GMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLS 219
Query: 387 ACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
AC A+E E++I E + +S LV + KCG + +A
Sbjct: 220 ACTDLGALELGKWIESYIEKERVLKTVELSN------ALVDMFAKCGDVDKA 265
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 214/393 (54%), Gaps = 34/393 (8%)
Query: 264 EAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+A+E+ D +GV + T C ++VH + QS I+ D L V+
Sbjct: 214 DALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLATAVV 273
Query: 320 EMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+MY KCG + +A RVF+ + A + + +W+ MI G+A +G G++ L+LF +M + G+ P+
Sbjct: 274 DMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMEREGVAPD 333
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ T + V +AC A + E +F + +GI P EHY +V + G+ G L EA++ I
Sbjct: 334 DVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVI 393
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------------- 481
Q +P EP AL ++IHGD+DL + +++LDP +
Sbjct: 394 -QDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRW 452
Query: 482 -DPKKIPTPPPK----KRTAISILDGKSRLVEFRNPTLY--RDDEKLKA----LNQMKES 530
D ++ + K S+++ + + EF+ L R +E + +++
Sbjct: 453 EDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMARDMMREIRAE 512
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YVPDTR VLH I +E KE LLYHSE+LAIA+GL+ T +RI KNLRVC DCH A
Sbjct: 513 GYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEAT 572
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +SR+ R+++VRD RFHHFKDG+CSC DYW
Sbjct: 573 KFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ K G DAR +FD M +R++ SW+ M++GY + L++F++MR
Sbjct: 164 DVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMR 223
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G+ N AC A A+ +H +S GI + +V + KCG
Sbjct: 224 ARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQS--GIQMDEKLATAVVDMYCKCGC 281
Query: 430 LFEAQQFIEQKLPFEPTA-EFWEALRNYARIHG 461
+ EA + E LP W + +HG
Sbjct: 282 VEEAWRVFE-ALPLAAKGLTTWNCMIGGFAVHG 313
>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 220/413 (53%), Gaps = 38/413 (9%)
Query: 246 LPPSVADLARLC----QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAK 297
L P+V L Q G E+IE + ++G+K +++ +L CG + K
Sbjct: 89 LTPNVVSWTALISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGK 148
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H ++ + DL + +I+ Y K G + A +VF A++++ SW+ MI G+A NG
Sbjct: 149 EIHCLSIRKSFIEDLYVATALIDTYSKSGDLESAHKVF-WSAEKTLASWNCMIMGFAING 207
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G E + L + M++ G+ P+ TF A+ S C ++ +EE + F+ M +++GI P EHY
Sbjct: 208 CGREVIALLDGMQRAGILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHY 267
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+ +LG+ G+L EA FI Q +P +P A W A+ RIHG+I+ + A + + L+
Sbjct: 268 SCMADLLGRAGYLDEAWDFI-QTMPIKPDASVWGAMLGSCRIHGNIEFAEIAAKELFKLE 326
Query: 478 PSKA-----------------DPKKIP----TPPPKKRTAISILDGKSRLVEFRNPTLYR 516
P + D +I T K R S + R+ F +
Sbjct: 327 PYNSANYVLMLSLYAMSNRWEDVDRIKDLMDTRGIKPRQVWSWIQIDQRVHLFSAGGIPH 386
Query: 517 DDEK------LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
DE + ++++K+ Y+PD V +ID+E K + LL H+E+LAI YGLI T +
Sbjct: 387 QDEGEIYYELYQLVSELKKFGYLPDVNCVYQNIDEEEKVKMLLSHTEKLAITYGLIKTSS 446
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R+IKN R+C DCH A K++S + RE+ +RD RFHHFK GKCSC DYW
Sbjct: 447 -APIRVIKNTRICSDCHTAAKLISLVRSREIFLRDGVRFHHFKAGKCSCNDYW 498
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD----SWHL 348
+++AK++ + + I+ DL+ N ++ Y G +A + + + SW
Sbjct: 39 FDHAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTA 98
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSE 407
+I+G + NG E ++ F QM++ G++PN T ++ CG +++ IH S++
Sbjct: 99 LISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKS 158
Query: 408 F 408
F
Sbjct: 159 F 159
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K +T ++ +FD+M ++++ +W+ +I+GY+ G D +L +M++ G++P+ T
Sbjct: 1 MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLV 421
+ ++ + +EA +K G++P + L+
Sbjct: 61 WNSLVAGYSMRGHTKEALALIHDIKIS-GLTPNVVSWTALI 100
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 209/384 (54%), Gaps = 29/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G +A + ++F E K VH + ++S + + N +++MY K G
Sbjct: 243 EMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSG 302
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DAR+VF+ + ++ + +W+ M+ +A GLG E + FE+MRK G+ N+ TFL + +
Sbjct: 303 SMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILT 362
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E H+ M E+ + P EHY+ +V +LG+ G L A FI K+P EPT
Sbjct: 363 ACSHGGLVKEG-KHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFI-FKMPMEPT 420
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
A W AL R+H + + A + + LDP + P K
Sbjct: 421 AAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKM 480
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--RNPTLYRDDEKLKALNQ----MKESTYVPDTRYV 539
+ KK A S ++ + + F + T R +E K ++ +++ YVPD YV
Sbjct: 481 MKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYV 540
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L +D++ +E L YHSE++A+A+ LI PA +RI+KN+R+CGDCH+A K +S++ R
Sbjct: 541 LLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFER 600
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFHHF +G CSCGDYW
Sbjct: 601 EIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++ C K ++A+K+H + S GD L+N +I +Y KCGS+ +A +VFD M
Sbjct: 54 YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAF 398
+ M SW +I GYA N + E + L M K +PN TF ++ A G+ AD+
Sbjct: 114 KKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQ 173
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
IH ++K ++ + Y+G L+ + +CG +
Sbjct: 174 IHALAVKCDW----HEDVYVGSALLDMYARCGKM 203
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 264 EAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EAI L M KG K + F +L + G ++H ++ D+ + + ++
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALL 194
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +CG M A VFD + ++ SW+ +I+G+A G G+ L +F +M++ G +
Sbjct: 195 DMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHF 254
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T+ ++FS A+E+ ++H +KS ++ ++G ++ + K G + +A++
Sbjct: 255 TYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTA----FVGNTMLDMYAKSGSMIDARKV 310
Query: 437 IEQKL 441
E+ L
Sbjct: 311 FERVL 315
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 209/417 (50%), Gaps = 48/417 (11%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHD 301
L + L + G E++ D+ G+ D T+ C AK +H
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
Y + D++L +I+MY KCGS+ AR +FD M R++ +W MI Y +G G++
Sbjct: 277 YINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEK 336
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLV 421
L+LF M + G+ PN TF+++ AC A IEE F SM E+G++P +HY +V
Sbjct: 337 ALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMV 396
Query: 422 GVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--- 478
+LG+ G L EA + IE +P E W AL RIH +DL + ++ L
Sbjct: 397 DLLGRAGRLDEALEMIE-GMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKP 455
Query: 479 --------------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF--R 510
+K +KIP RT I + +L +F
Sbjct: 456 GHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIP-----GRTWIEV---GEKLYQFGVG 507
Query: 511 NPTLYRDDEKLKALNQMKE----STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ T R +E K L ++ E + Y PDT VL+D+D+E K+ L HSE+LAIA+GL+
Sbjct: 508 DKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLL 567
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P P+RI KNLRVCGDCH K +S I + +IVRD KRFHHFK+G CSC DYW
Sbjct: 568 VLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL+ G D + C + K + + +H L+ + + +++MY +C
Sbjct: 141 ELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCK 200
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA ++F M R + +W +MI A++G+ E L F++MR G+ P++ + V
Sbjct: 201 VVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVY 260
Query: 387 ACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
AC A+ +A IH + GT ++ + KCG + E+ ++I ++
Sbjct: 261 ACAKLGAMNKAKAIHAYINGTGYSLDVILGT----AMIDMYAKCGSV-ESARWIFDRMQV 315
Query: 444 EPTAEFWEALRNYARIHG 461
W A+ HG
Sbjct: 316 RNVIT-WSAMIAAYGYHG 332
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L + NK++ MY + G++ DA+ +FD M+ R SW +++ GYA G +F ++
Sbjct: 84 NLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELL 143
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G ++ + V AC ++ IH ++K G+ G LV + +C
Sbjct: 144 RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKC--GLDYGHFVCATLVDMYARCKV 201
Query: 430 LFEAQQFI 437
+ +A Q
Sbjct: 202 VEDAHQIF 209
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 201/383 (52%), Gaps = 36/383 (9%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D + + C + ++ H Y + D ++ N +I+MY KCG ++ A
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ M + SW+ MI GY +GLG E L LF + LGL+P++ TF+ + S+C +
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ E + F++M +F I P EH + +V +LG+ G + EA FI + +PFEP W
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI-RNMPFEPDVRIWS 586
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------------------D 482
AL + RIH +I+L + + + L P
Sbjct: 587 ALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWG 646
Query: 483 PKKIPTPPPKKRTAI--SILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVL 540
KKIP + I + + G ++ + R E+L L +MK Y + +V
Sbjct: 647 LKKIPGCSWIEINGIVHAFVGGDQSHLQLSQ--INRKLEEL--LVEMKRLGYQAECSFVF 702
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D+++E KEQ LLYHSE+LAIA+G+++ A P+ + KNLRVCGDCH AIK M+ I RE
Sbjct: 703 QDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKRE 762
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+ VRD RFHHFK+G C+CGD+W
Sbjct: 763 ITVRDANRFHHFKNGTCNCGDFW 785
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L E C K AKK+H +FL++T D + +K+ +Y C + ARR+FD + + S
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ W+ +I YA NG D + L+ M LG++PN+ T+ V AC AIE+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG-VEIH 132
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S FG+ LV KCG L EAQ+ + A W A+ ++G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA--WNAMIAGCSLYG- 189
Query: 463 IDLEDHAEELMVDLDPSKADP 483
L D A +L++ + P
Sbjct: 190 --LCDDAVQLIMQMQEEGICP 208
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 262 VKEAIELMDKGVKADA-----SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
+KEA+EL D+ + DA ++ C +K+H Y ++ D++L N
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGN 351
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG + DA R FD M + S+ +++G NG L +F M+ G+ P
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ T L V AC A++ F + G + T L+ + KCG + A++
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAREV 470
Query: 437 IEQKLPFEPTAEFWEALRNYARIHG 461
+ + + W A+ IHG
Sbjct: 471 FNRMDRHDIVS--WNAMIIGYGIHG 493
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+G + ++ GV+ + + + + C E+ ++H + + D+ + +
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTAL 150
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++ Y KCG + +A+R+F M+ R + +W+ MI G + GL D+ +QL QM++ G+ PN
Sbjct: 151 VDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS 210
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQ 435
T + V G A A+ +H ++ F G+ GT GL+ + KC L A++
Sbjct: 211 STIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT----GLLDMYAKCQCLLYARK 266
Query: 436 FIE 438
+
Sbjct: 267 IFD 269
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC + V+ +++ ++G+ ++S + G K + K +H Y ++ + +V+
Sbjct: 190 LCDDA-VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGL 374
+++MY KC + AR++FD M R+ SW MI GY + E L+LF+QM K +
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAM 308
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLF 431
P T +V AC + +H +K + + LG L+ + KCG +
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK----LGXVLDILLGNTLLSMYAKCGVID 364
Query: 432 EAQQFIEQKLP 442
+A +F + P
Sbjct: 365 DAIRFFDXMNP 375
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 211/402 (52%), Gaps = 39/402 (9%)
Query: 257 CQEG-KVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C E ++ EA+EL + G+ + ++ C + K++H S
Sbjct: 165 CTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSS 224
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
++ +++MY KCGS+ + +VF M R+ SW MI A +G GDE L+LF++M
Sbjct: 225 VLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNL 284
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G+ + TF+ V AC A I+E+ F SM ++ I+P HY + +G+ G L
Sbjct: 285 EGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQ 344
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------- 483
+A++ I +PF P W+ L N RIH + EL+ L P +
Sbjct: 345 DAEELI-HSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVY 403
Query: 484 -------------KKIPTPPPKKRTAISILDGKSRLVEF---------RNPTLYRDDEKL 521
K + KK S ++ K+++ EF R+ L + EKL
Sbjct: 404 AATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILL-ELEKL 462
Query: 522 KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+M+E+ YVP+T+ VLH +++E KEQ + HSE+LAIA+GLI+TP TPL I+KNLR
Sbjct: 463 G--GRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLR 520
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH A K++++I+ R ++VRD RFHHF+DG+CSC DYW
Sbjct: 521 VCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E +++H + N ++ MY KCG + +AR +F+ + +R++ SW MI Y
Sbjct: 2 EEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAY 61
Query: 354 ADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGIS 411
A +G G E L LF +MR G ++PN TF VF+ACG + +E+ IH +M S S
Sbjct: 62 ALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKS 121
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIE 438
L+ + +CG L EA++ +
Sbjct: 122 SNAILENALLNMYVRCGSLEEARKVFD 148
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 260 GKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL-- 312
G+ +EA+ L D V+ +A F +F CG + E +++H + S G+L
Sbjct: 65 GRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMAS---GELKS 121
Query: 313 ---VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+L N ++ MY +CGS+ +AR+VFD M SW MI +N E L+LF +M
Sbjct: 122 SNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRM 181
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIE 395
G+ P T +V +AC + A++
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALK 207
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 224/400 (56%), Gaps = 40/400 (10%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
QEG EA+E+ + ++ ++ C N + + +H Y +++I+ D V
Sbjct: 279 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 338
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++MY KCG + A VF+ M+++ + SW+ MI G A +G ++ + LF +M
Sbjct: 339 LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---D 395
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PNE TF+ V +AC +++ F SM+ E+G+ P EHY +V +LG+ G L EA
Sbjct: 396 INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEA 455
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SK 480
++ + +P EPT W AL R HG+++L + +++++L+P +K
Sbjct: 456 EKVV-SSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAK 514
Query: 481 A-------DPKKIPTPPPKKRT-AISILD-GKSRLVEF--------RNPTLYRDDEKLKA 523
A + +K+ K T SI+D G+ + +F + +Y+ +K+K
Sbjct: 515 AGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKE 574
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
QM+ Y PD VL DID+E KE A+ HSE+LAI +GLI+T T +RI+KNLRVC
Sbjct: 575 RLQME--GYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVC 632
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+A K++S++ RE+IVRD R+HHF++G CSC D+W
Sbjct: 633 EDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 260 GKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
G++ EA ++D KG + DA C+ + + G ++ E + + F R + N +
Sbjct: 186 GRLVEARRILDDKGGEVDAVCWNAMID--GYLRFGE-VEAARELFEGMPDRSMISTWNAM 242
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I + +CG + AR FD M +R SW MI+GY G E L++F QM+K ++P +
Sbjct: 243 ISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRK 302
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQ 435
+V SAC + A+++ +IH + ++ + + LG LV + KCG + A +
Sbjct: 303 FVLPSVLSACANLGALDQGRWIHTYAKRNSIQL----DGVLGTSLVDMYAKCGRIDLAWE 358
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHG 461
E+ E ++ W A+ +HG
Sbjct: 359 VFEKMSNKEVSS--WNAMIGGLAMHG 382
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 11/164 (6%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCG-----SMTDARRVFDHMADRSMDSWHLMIN 351
K+ H L++ D + +++ Y S + RVFD + ++ W+ MI
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGI 410
+N + + L+ +M +PN+ T+ AV AC A + E +H +K G
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG- 169
Query: 411 SPGTEHYL-GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G H L + + G L EA++ ++ K E A W A+
Sbjct: 170 --GDGHILSSAIRMYASFGRLVEARRILDDK-GGEVDAVCWNAM 210
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 219/403 (54%), Gaps = 33/403 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA Q GK EA+ L D+ GVK + +L C + + +H Y + I
Sbjct: 361 LACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRI 420
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++ +++MY KCG ++ A +VF+ M + + +W+ +I G A +G E QLF++
Sbjct: 421 EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKE 480
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ G++PN+ TF+A+ SAC A ++E + M S +GI P EHY ++ +L + G
Sbjct: 481 MKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAG 540
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA + I +P EP AL RIHG+ +L + + +++L P +
Sbjct: 541 FLEEAMELI-GTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 599
Query: 482 ----------DPKKI----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
D +K+ K +S+++ K + F +P + EKL
Sbjct: 600 NIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLN 659
Query: 523 ALNQMKEST--YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
++ +S Y DT VL D+++E KE AL HSE+LAIAYGL+ ++ +RI+KNL
Sbjct: 660 EIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNL 719
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH+ IK++S++ GRE+IVRD RFHHF+DG+CSC D+W
Sbjct: 720 RVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+LV N ++ + KCG++ DA +F M R + SW+ M+ YA G +E L LF+QMR
Sbjct: 322 NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMR 381
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+G++P E T +++ SAC A+++ +H + ++ I + LV + KCG +
Sbjct: 382 AVGVKPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKI 440
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
A Q + A W + IHG++ A++L ++ + +P I
Sbjct: 441 SLATQVFNAMESKDVLA--WNTIIAGMAIHGNV---KEAQQLFKEMKEAGVEPNDI 491
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + D+ +L L N K AK++ F + R D+V N +I+ Y K
Sbjct: 221 VVKSGFECDSYIVSSLIHLYANGKDLGAAKQL---FNLCSAR-DVVSWNAMIDGYVKHVE 276
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M AR VFD M R + SW+ MINGYA G DE +LF++M + L + + LA F
Sbjct: 277 MGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLV-SWNSMLAGFVK 335
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
CG+ +E+AF F M +S + ++ +CG EA +Q
Sbjct: 336 CGN---VEDAFGLFSEMPCRDVVS-----WNSMLACYAQCGKPNEALALFDQ 379
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 216/400 (54%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIEL---MDK--GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G EA+E M K G+KA F ++ + + ++H ++ + D+
Sbjct: 349 QNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDV 408
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I++Y KCG + +A +F+ M RS W+ +I+G +G G E L LF +M++
Sbjct: 409 YVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQE 468
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF+++ +AC A +++ F+ M+ + I P +HY + +LG+ G L E
Sbjct: 469 GIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDE 528
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
A FI Q +P +P + W AL RIHG++++ A + + +LDP + +
Sbjct: 529 AFNFI-QNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYA 587
Query: 493 KRTAISILDGKSRLVEFRNP----------------TLYRDD--------EKLKA----- 523
K +D LV +N Y + E+++A
Sbjct: 588 KVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSL 647
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L +++ YV D +VL D++ + KE L HSERLAIA+G+I+TP+RTPL I KNLRVC
Sbjct: 648 LAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVC 707
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCHNA K +S+I RE+IVRD+ RFHHFKDG CSCGD+W
Sbjct: 708 GDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG--- 310
Q G+ A+++ GV D +L +AK +H Y ++ RG
Sbjct: 247 QRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMR---RGWDV 303
Query: 311 -DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D++ N +++MY K ++ A+R+FD M + SW+ +I GY NGL +E ++ + M
Sbjct: 304 DDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM 363
Query: 370 RK-LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLG 425
+K GL+ + TF++V A A+++ +H S+K I + Y+G L+ +
Sbjct: 364 QKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIK----IGLNVDVYVGTCLIDLYA 419
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG L EA E K+P T W A+ + +HG
Sbjct: 420 KCGKLAEAMLLFE-KMPRRSTGP-WNAIISGLGVHG 453
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHD 301
+P A L+ LC+ + EA+ L + GV D ++ +C A +H
Sbjct: 134 VPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHV 193
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
Y ++ + +L + N +I++YGK G + +A+ VF M R + +W+ +I+G G
Sbjct: 194 YAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAA 253
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSA 387
L++F+ MR G+ P+ T +++ SA
Sbjct: 254 ALKMFQGMRGSGVSPDVLTLVSLASA 279
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 295 NAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+A ++H L+ +R + + ++ Y + G +++A +VFD M++R + +W+ M++G
Sbjct: 85 SAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGL 144
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISP 412
N E + LF +M G+ + T +V C D + +H ++K G+
Sbjct: 145 CRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKH--GLDK 202
Query: 413 GTEHYLGLVGVLGKCGHLFEAQ 434
L+ V GK G L EAQ
Sbjct: 203 ELFVCNALIDVYGKLGMLEEAQ 224
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 212/403 (52%), Gaps = 41/403 (10%)
Query: 257 CQE-GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C E G+ ++A+E++ K G K + + C + K+VH Y + + GD
Sbjct: 344 CMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGD 403
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L ++ MY KCG + +R VFD + + + +W+ MI A +G G E L LFE M +
Sbjct: 404 LTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQ 463
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++PN TF V S C + +EE F SM + + P HY +V V + G L
Sbjct: 464 SGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLH 523
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------- 478
EA +FI Q++P EPTA W AL R++ +++L + + +++P
Sbjct: 524 EAYEFI-QRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNIL 582
Query: 479 ------SKADPKKIPTPPPKKRTAISILDGKSRL-VEFRNPTLYRDD----EKLKALN-- 525
S+A +I K I+ G S L V R T D E K N
Sbjct: 583 VTAKLWSEASEARILM----KERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFL 638
Query: 526 -----QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
+MK + Y PDT YVL DIDQE K ++L HSE+LA+A+G+++ ++ +R+ KNL
Sbjct: 639 DELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNL 698
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
R+CGDCHNAIK +S++VG +IVRD+ RFHHF++G CSC D W
Sbjct: 699 RICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L +G+K S F T+ + CG K+VHD ++ + D L N +I YGKC
Sbjct: 123 LRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKC 182
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ ARRVFD + + + SW M + Y + GL GL +F +M G++PN T ++ A
Sbjct: 183 VEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPA 242
Query: 388 C 388
C
Sbjct: 243 C 243
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA C+ G GVK ++ ++ C K ++ + +H + ++ + ++
Sbjct: 218 LAVFCEMGW---------NGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENV 268
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ + ++ +Y +C S+ AR VFD M R + SW+ ++ Y N D+GL LF QM
Sbjct: 269 FVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSK 328
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
G++ +E T+ AV C E+A M++ G P
Sbjct: 329 GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQN-LGFKP 367
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 212/399 (53%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q GK KEAI+L D G+ + + C + +++HD+ +S ++
Sbjct: 222 QCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIR 281
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + DA R+FD+M +R++ SW MI G A +G ++ L LF +M G
Sbjct: 282 VCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTG 341
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TF+ + AC +E+ +F SM ++GI P EHY +V + + G L EA
Sbjct: 342 VKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEA 401
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+FI +P P W AL ++H +I L + A + LDP
Sbjct: 402 HEFI-MNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAE 460
Query: 479 -----SKADPKKIPTPPPKKRT-AISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
A +K+ K+T S + + + F + +++ EKL L
Sbjct: 461 AGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKL--L 518
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+MK YVP+T VL D++++ KE+ L HSE+LA+ +GLI T T +RI+KNLRVC
Sbjct: 519 QRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCE 578
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A+KI+S + RE++VRD RFH FK+G CSCGDYW
Sbjct: 579 DCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+C + L + C N K VH Y + ++ ++ L N ++ +Y CG + AR+VFD
Sbjct: 115 TCSFVL-KACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDK 173
Query: 338 MADRSMDSWHLMI-------------------------------NGYADNGLGDEGLQLF 366
M R + +W++MI GYA G E + LF
Sbjct: 174 MPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLF 233
Query: 367 EQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M GL PNE T +AV AC + + IH S +S G L+ +
Sbjct: 234 LEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRS--GYEKNIRVCNTLIDMYV 291
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG L +A + + E T W A+ HG
Sbjct: 292 KCGCLEDACRIFDNME--ERTVVSWSAMIAGLAAHG 325
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 226/415 (54%), Gaps = 36/415 (8%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKW 292
++ GD ++ S+ + Q + A+EL + G A+ + ++ C
Sbjct: 170 DEMVTGDAIVWNSI--IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 227
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
E + H + ++ DL+LNN +++MY KCGS+ DARRVF+ M +R + +W MI+G
Sbjct: 228 LELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
A NG E L+LFE M+ G +PN T + V AC A +E+ + +F SMK +GI+P
Sbjct: 286 LAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINP 345
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
G EHY ++ +LGK G L +A + + + + EP A W L R+ ++ L ++A +
Sbjct: 346 GREHYGCMIDLLGKAGKLDDAVKLLNE-MECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 404
Query: 473 MVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF-- 509
++ LDP A K++ KK S ++ ++ F
Sbjct: 405 VIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFII 464
Query: 510 ---RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
+P + ++KL + ++++ YVP+T +VL D++ E E +L +HSE+LA+A+GL
Sbjct: 465 GDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 524
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
++ P+ +RI KNLR+CGDCH K+ S++ R +++RD R+HHF+DGKCSCG
Sbjct: 525 MTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQ-EGKVKEAIELMDK-GVKADASCFYTLF 284
N LN+ +Q P + + ++ C+ K E + LM + GV+ + + ++
Sbjct: 62 NLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVL 121
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C + + +H ++ + D+ + + +I+++ K G DA VFD M
Sbjct: 122 RACNG---MSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 178
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---EAFIHF 401
W+ +I G+A N D L+LF++M++ G + T +V AC +E +A +H
Sbjct: 179 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 238
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ ++ LV + KCG L +A++ Q
Sbjct: 239 VKYDQDLILNN------ALVDMYCKCGSLEDARRVFNQ 270
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L G+ AD++ + L + C + + + + + + + L N +I MY K
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DA ++FD M R++ SW MI+ Y+ + + L+L M + G++PN T+ +V A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 388 C-GSADA 393
C G +D
Sbjct: 124 CNGMSDV 130
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 224/400 (56%), Gaps = 40/400 (10%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
QEG EA+E+ + ++ ++ C N + + +H Y +++I+ D V
Sbjct: 280 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 339
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++MY KCG + A VF+ M+++ + SW+ MI G A +G ++ + LF +M
Sbjct: 340 LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---D 396
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PNE TF+ V +AC +++ F SM+ E+G+ P EHY +V +LG+ G L EA
Sbjct: 397 IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEA 456
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SK 480
++ + +P EPT W AL R HG+++L + +++++L+P +K
Sbjct: 457 EKVV-SSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAK 515
Query: 481 A-------DPKKIPTPPPKKRT-AISILD-GKSRLVEF--------RNPTLYRDDEKLKA 523
A + +K+ K T SI+D G+ + +F + +Y+ +K+K
Sbjct: 516 AGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKE 575
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
QM+ Y PD VL DID+E KE A+ HSE+LAI +GLI+T T +RI+KNLRVC
Sbjct: 576 RLQME--GYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVC 633
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+A K++S++ RE+IVRD R+HHF++G CSC D+W
Sbjct: 634 EDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 260 GKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
G++ EA ++D KG + DA C+ + + G ++ E + + F R + N +
Sbjct: 187 GRLVEARRILDDKGGEVDAVCWNAMID--GYLRFGE-VEAARELFEGMPDRSMISTWNAM 243
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I + +CG + AR FD M +R SW MI+GY G E L++F QM+K ++P +
Sbjct: 244 ISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRK 303
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQ 435
+V SAC + A+++ +IH + ++ + + LG LV + KCG + A +
Sbjct: 304 FVLPSVLSACANLGALDQGRWIHTYAKRNSIQL----DGVLGTSLVDMYAKCGRIDLAWE 359
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHG 461
E+ E ++ W A+ +HG
Sbjct: 360 VFEKMSNKEVSS--WNAMIGGLAMHG 383
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 11/164 (6%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCG-----SMTDARRVFDHMADRSMDSWHLMIN 351
K+ H L++ D + +++ Y S + RVFD + ++ W+ MI
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGI 410
+N + + L+ +M +PN+ T+ AV AC + + E +H +K G
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLG- 170
Query: 411 SPGTEHYL-GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G H L + + G L EA++ ++ K E A W A+
Sbjct: 171 --GDGHILSSAIRMYASFGRLVEARRILDDK-GGEVDAVCWNAM 211
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 203/357 (56%), Gaps = 28/357 (7%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E +++H +++ D V+ N +I+MY KCG + DAR FD M + SW+ +I GY
Sbjct: 425 EPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGY 484
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+ +GLG E L LF+ M++ +PN+ TF+ V SAC +A +++ HF+SM ++GI P
Sbjct: 485 SIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPC 544
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY +V +LG+ G EA + I + +PF+P+ W AL IH ++DL + +
Sbjct: 545 IEHYTCMVWLLGRSGQFDEAVKLIGE-IPFQPSVMVWRALLGACVIHKNLDLGKVCAQRV 603
Query: 474 VDLDPSK-----------ADPKKIPTPPPKKRT----------AISILDGKSRLVEFR-- 510
++++P A K+ ++ +S ++ + + F
Sbjct: 604 LEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVG 663
Query: 511 ---NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+P + L+ L + +++ YVPD VL D++ + KE+ L HSERLA+A+GLI
Sbjct: 664 DTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLI 723
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+ +RIIKNLR+C DCH IK++S+IV RE+++RD RFHHF+ G CSCGDYW
Sbjct: 724 QIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 11/225 (4%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASC-----FYTLFELCGNPKWYENAK 297
D ++P S+ ++R Q K KEA+EL + ++ F ++ + C +
Sbjct: 269 DDLIPWSLM-ISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H L+ + ++ ++N ++++Y KCG + ++ ++F +++ +W+ +I GY G
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH 416
G++ L LF M L +QP E T+ +V A S A+E IH ++K+ + +
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN 447
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + +A+ ++ + + W AL IHG
Sbjct: 448 --SLIDMYAKCGRIDDARLTFDKMDKQDEVS--WNALICGYSIHG 488
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 13/175 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G + + F TL +L + + VH Y + + D + +I+ Y CG++
Sbjct: 98 EGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDA 157
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR+VFD + + M SW M+ YA+N ++ L LF QMR +G +PN T A +C
Sbjct: 158 ARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNG 217
Query: 391 ADAIEEAFIHFESMKSEFGISPGT----EHYLG--LVGVLGKCGHLFEAQQFIEQ 439
+A F+ KS G + + Y+G L+ + K G + EAQQF E+
Sbjct: 218 LEA-------FKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEE 265
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + ++ K VH L+ DL + ++E+Y K G + +A++ F+ M + W
Sbjct: 215 CNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPW 274
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
LMI+ YA + E L+LF +MR+ + PN TF +V AC S + IH S
Sbjct: 275 SLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIH--SC 332
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G+ L+ V KCG +
Sbjct: 333 VLKVGLDSNVFVSNALMDVYAKCGEI 358
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 200/377 (53%), Gaps = 32/377 (8%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D +C L + C + + ++V Y + G+L + N +I MY +CG + A RVF
Sbjct: 224 DVTCIL-LLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVF 282
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+S+ +W MI+G A NG G++ + +FE+M + + P+EQTF V SAC + ++
Sbjct: 283 SGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVD 342
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
E F F+ M+ E+G+ P HY +V ++G+ G L EA +F+ ++ P A W L
Sbjct: 343 EGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLG 402
Query: 456 YARIHGDIDLEDHAEELMVDLDPSKA--------------------DPKKIPTPPPKKRT 495
RIHG +DL + +++L +A + +K+ + T
Sbjct: 403 ACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTT 462
Query: 496 -AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQE 546
+ ++ + EF R +Y + ++ Q++ + YVP+ LHD+D E
Sbjct: 463 PGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEI--YKQLRIAGYVPNVSSELHDLDSE 520
Query: 547 AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
KE AL YHSE+LAIA+ L+ TP P+R+ KNLRVC DCHN K+ S I R +IVRD
Sbjct: 521 GKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRDR 580
Query: 607 KRFHHFKDGKCSCGDYW 623
RFHHF+ GKCSC DYW
Sbjct: 581 TRFHHFQGGKCSCNDYW 597
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A+++H + D +L ++ Y G AR++FD M R +W+++I YA
Sbjct: 139 HARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYA 198
Query: 355 DNGLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSACGSADAIE 395
N + L+LFE+MR +P++ T + + AC S A++
Sbjct: 199 RNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALD 241
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 200/377 (53%), Gaps = 32/377 (8%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D +C L + C + + ++V Y + G+L + N +I MY +CG + A RVF
Sbjct: 238 DVTCIL-LLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVF 296
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+S+ +W MI+G A NG G++ + +FE+M + + P+EQTF V SAC + ++
Sbjct: 297 SGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVD 356
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
E F F+ M+ E+G+ P HY +V ++G+ G L EA +F+ ++ P A W L
Sbjct: 357 EGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLG 416
Query: 456 YARIHGDIDLEDHAEELMVDLDPSKA--------------------DPKKIPTPPPKKRT 495
RIHG +DL + +++L +A + +K+ + T
Sbjct: 417 ACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTT 476
Query: 496 -AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQE 546
+ ++ + EF R +Y + ++ Q++ + YVP+ LHD+D E
Sbjct: 477 PGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEI--YKQLRIAGYVPNVSSELHDLDSE 534
Query: 547 AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
KE AL YHSE+LAIA+ L+ TP P+R+ KNLRVC DCHN K+ S I R +IVRD
Sbjct: 535 GKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRDR 594
Query: 607 KRFHHFKDGKCSCGDYW 623
RFHHF+ GKCSC DYW
Sbjct: 595 TRFHHFQGGKCSCNDYW 611
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A+++H + D +L ++ Y G AR++FD M R +W+++I YA
Sbjct: 153 HARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYA 212
Query: 355 DNGLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSACGSADAIE 395
N + L+LFE+MR +P++ T + + AC S A++
Sbjct: 213 RNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALD 255
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 203/385 (52%), Gaps = 30/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ V D ++ CG+ K +H+ ++ I DL L +++MY KCG
Sbjct: 258 EMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCG 317
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ ++ RVF+ M +R + +W MI G A++G G+ L F +M ++PN+ TF+ V S
Sbjct: 318 DIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLS 377
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E + +F SM + +SP EHY +V +LG+ G L EA + I + +PF P
Sbjct: 378 ACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELI-KSMPFAPD 436
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------SKADPKKIPTPPP 491
A W AL RI+ ++++ + A +++L+P +K K +
Sbjct: 437 AIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRM 496
Query: 492 KKRTAISILDGKSRLVEFRNPT--LYRDD----EKLKALNQMKEST-------YVPDTRY 538
K I + G S +E N D E K L + E T Y P T
Sbjct: 497 MKNINIQKVPGSSS-IEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTAS 555
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL D D++ KE AL +HSE+LAIA+GL+ST + +RI+KNLRVC DCH AIK++SR
Sbjct: 556 VLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYK 615
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R +IVRD RFHHF +G CSC DYW
Sbjct: 616 RRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
HD F + R DLV N +I + G + A+++FD +R + SW MI YA
Sbjct: 191 HDLFDRMPER-DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQS 249
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEH 416
+E L+LF +M+ + P++ T ++V SACG A+ IH E + E + GT
Sbjct: 250 NEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGT-- 307
Query: 417 YLGLVGVLGKCGHL 430
LV + KCG +
Sbjct: 308 --SLVDMYAKCGDI 319
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 208/393 (52%), Gaps = 37/393 (9%)
Query: 264 EAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+ L + + D F ++ +C + + E K +H L+ + + + +I
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALI 269
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+Y KCG + A +VFD + R++ W+ M+ A + LFE+M +G++PN
Sbjct: 270 SLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFI 329
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+FL+V AC A +E+ +F M+ ++GI P TEHY LV +LG+ G L EA I+Q
Sbjct: 330 SFLSVLYACSHAGLVEKGREYFSLMR-DYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQ 388
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------- 483
+P PT W AL RIH D ++ + ++++D S +
Sbjct: 389 -MPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEE 447
Query: 484 -----KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL--------NQMKES 530
K + KK T +S ++ +++ F R K + +M+++
Sbjct: 448 AARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGD--RSHAKWVEIYEKLEELEEEMEKA 505
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YV DT +VL +D E K + + YHSERLAIA+GLI+ P P+R++KNLRVCGDCH AI
Sbjct: 506 GYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAI 565
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K MS+ GR LIVRDN RFH F+DGKCSCGDYW
Sbjct: 566 KFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+++ GV+ D + + + CG + + K VH +++ D+ + + +++MY KCG
Sbjct: 117 MLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGE 176
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR +FD M +R++ SW MI GYA G E L LF+Q + N+ TF +V
Sbjct: 177 IGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRV 236
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
C S+ +E IH +K F S ++G L+ + KCG + A Q ++
Sbjct: 237 CSSSTFLELGKLIHGLCLKMSFDSSS----FVGSALISLYSKCGVIEGAYQVFDE 287
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + L+ ++ ++++ +I +Y K + +VFD +S +W +I+ +A N
Sbjct: 46 QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNE 105
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM-KSEFGISPGTEH 416
LQ F +M G++P++ + + ACG F+ + KS ++ T +
Sbjct: 106 APLLALQFFRRMLNDGVRPDDHIYPSATKACG--------FLRRSDVGKSVHCLAVKTGY 157
Query: 417 YL------GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
Y LV + KCG + +A+ ++ +P E W + I+G L+D E
Sbjct: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDE-MP-ERNVVSWSGM-----IYGYAQLDDGVE 210
Query: 471 ELMV 474
L +
Sbjct: 211 ALTL 214
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 213/393 (54%), Gaps = 34/393 (8%)
Query: 264 EAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+A+E+ D +GV + T C ++VH + QS I+ D L V+
Sbjct: 214 DALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLATAVV 273
Query: 320 EMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+MY KCG + +A RVF+ + A + + +W+ MI G+A +G G + L+LF +M + G+ P+
Sbjct: 274 DMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPD 333
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ T + V +AC A + E +F + +GI P EHY +V + G+ G L EA++ I
Sbjct: 334 DVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVI 393
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------------- 481
Q +P EP AL ++IHGD+DL + +++LDP +
Sbjct: 394 -QDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRW 452
Query: 482 -DPKKIPTPPPK----KRTAISILDGKSRLVEFRNPTLY--RDDEKLKA----LNQMKES 530
D ++ + K S+++ + + EF+ L R +E + +++
Sbjct: 453 EDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMASDMMRKIRAE 512
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YVPDTR VLH I +E KE LLYHSE+LAIA+GL+ T +RI KNLRVC DCH A
Sbjct: 513 GYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEAT 572
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +SR+ R+++VRD RFHHFKDG+CSC DYW
Sbjct: 573 KFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ K G DAR +FD M +R++ SW+ M++GY + L++F++MR
Sbjct: 164 DVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMR 223
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G+ N AC A A+ +H +S GI + +V + KCG
Sbjct: 224 ARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQS--GIQMDEKLATAVVDMYCKCGC 281
Query: 430 LFEAQQFIEQKLPFEPTA-EFWEALRNYARIHG 461
+ EA + E LP W + +HG
Sbjct: 282 VEEAWRVFE-ALPLAAKGLTTWNCMIGGFAVHG 313
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 207/386 (53%), Gaps = 31/386 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE M+ G+ F +L + +++H L++ D + N ++ MY +C
Sbjct: 447 IERMELGISTFT--FGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRC 504
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + DA +VFD M D ++ SW MI+G A +G L+LF M G++PN+ T++AV
Sbjct: 505 GYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVL 564
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A ++E HF M+ G+ P EHY +V +LG+ G + +A FI + +P +
Sbjct: 565 SACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINE-MPCQV 623
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------------- 488
A W+ L + H ++D+ + A ++ L+P P + +
Sbjct: 624 DALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRS 683
Query: 489 ----PPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
K +S + + + EFR +P KL+ L ++K YVPDT
Sbjct: 684 LMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSV 743
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLIS-TPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VLHD+ E KE LL HSE++A+A+GLIS T A P+RI KNLRVC DCH+A+K +S+
Sbjct: 744 VLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKAT 803
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE+I+RD+ RFH KDG+CSCG+YW
Sbjct: 804 GREIILRDSNRFHRMKDGECSCGEYW 829
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIEL----MDKGV--------KADASCFYT-LFEL 286
P G + L A + L + G EA+ L +++G+ A +CF + LF L
Sbjct: 111 PVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHL 170
Query: 287 CGNPKWYENAKKVHDYFLQSTIRG-DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
G V + G D+ + +I+M+ K G + RRVFD + +R++
Sbjct: 171 AGGA--------VLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVV 222
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
W L+I YA +G DE ++LF M + G QP++ T ++ SAC
Sbjct: 223 WTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSAC 265
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGL 363
S + D V+ N ++ +Y KC ++ AR VFD M R + SW M + + NG E L
Sbjct: 78 SLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEAL 137
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LV 421
+LF + + GL PN T A AC +++ A + + G GT+ +G L+
Sbjct: 138 RLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF-WGTDVSVGCALI 196
Query: 422 GVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYARIHGDIDLEDHAEELMVDLDPSK 480
+ K G L ++ + FE T W L YA+ D A EL +D+ +
Sbjct: 197 DMFAKNGDLVAMRRVFDG--LFERTVVVWTLLITRYAQ----SGYSDEAVELFLDMLENG 250
Query: 481 ADPKKIPTPPPKKRTAISILDGKSRLVEFR 510
P + T S+L + L FR
Sbjct: 251 --------FQPDQYTLSSMLSACTELGSFR 272
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++++G++ + + ++ + C N ++ +++H + ++S + V+ N ++ MY + G
Sbjct: 350 KMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESG 409
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE--QMRKLGLQPNEQTFLAV 384
S+ +AR FD + +++M S ++ N GD ++ Q+ ++ L + TF ++
Sbjct: 410 SIEEARHAFDQLYEKNMVS-------FSGNLDGDGRSNTYQDYQIERMELGISTFTFGSL 462
Query: 385 FSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
SA S + + +H S+K+ F G++ +G LV + +CG+L +A Q ++
Sbjct: 463 ISAAASVGMLTKGQRLHALSLKAGF----GSDRAIGNSLVSMYSRCGYLVDACQVFDE 516
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 253 LARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G EA+EL ++ G + D ++ C + +++H L+ +
Sbjct: 227 ITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGL 286
Query: 309 RGDLVLNNKVIEMYGKCG---SMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-EGLQ 364
D ++ +++MY K S+ +AR VF+ M ++ +W +++GY G D + +
Sbjct: 287 ESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMI 346
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACG 389
LF +M G++PN T+ ++ AC
Sbjct: 347 LFCKMLNEGIRPNHITYSSMLKACA 371
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 217/405 (53%), Gaps = 42/405 (10%)
Query: 257 CQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C +EA+ L + ++ + + F + C + + K VH Y + ++G
Sbjct: 336 CHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAY-IDKNLKGTG 394
Query: 313 VLNN-----KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+NN +I MY KCG + A +VF M RS+ SW+ MI+G A NG + L LFE
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M G QP++ TF+ V SAC A +E +F SM ++GISP +HY ++ +L +
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARS 514
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------ 481
G F+ + + + EP W +L N RIHG ++ ++ E + +L+P +
Sbjct: 515 GK-FDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLL 573
Query: 482 -----------DPKKIPTP----PPKKRTAISILDGKSRLVEF--------RNPTLYRDD 518
D KI T KK + ++ + EF ++ ++R
Sbjct: 574 SNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRML 633
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+++ L ++E+ +VPDT VL+D+D+E KE AL HSE+LAIA+GLIST + +RI+K
Sbjct: 634 DEVDRL--LEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVK 691
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC +CH+A K++S+I RE+I RD RFHHFKDG CSC D W
Sbjct: 692 NLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ +++ ++ PA D V A +A Q G+ +EA+ + +
Sbjct: 195 SFTALITGYVSEGHVDDARRLFDEIPAKDVV--SWNAMIAGYVQSGRFEEALACFTRMQE 252
Query: 275 ADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
AD S ++ CG+ + E K + + +L L N +++MY KCG +
Sbjct: 253 ADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGT 312
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR++FD M D+ + W+ MI GY L +E L LFE M + + PN+ TFLAV AC S
Sbjct: 313 ARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACAS 372
Query: 391 ADAIE 395
A++
Sbjct: 373 LGALD 377
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDY------------------------ 302
+++ G+ ++ F +LF+ C K AK++H +
Sbjct: 117 QMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVG 176
Query: 303 --------FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
F +ST+R D V +I Y G + DARR+FD + + + SW+ MI GY
Sbjct: 177 ELRHARLVFDKSTLR-DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYV 235
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+G +E L F +M++ + PN+ T ++V SACG ++E S + G
Sbjct: 236 QSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG-KWIGSWVRDRGFGKNL 294
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIE 438
+ LV + KCG + A++ +
Sbjct: 295 QLVNALVDMYSKCGEIGTARKLFD 318
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS--MTDARRVFDHMADR--SMDSWHLMING 352
K++H ++S + L +K+IE S ++ A +F + + ++ W+ +I
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGIS 411
++ L LF QM GL PN TF ++F +C + A EA +H ++K +
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
P + L+ + + G L A+ ++
Sbjct: 162 PHV--HTSLIHMYSQVGELRHARLVFDK 187
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 204/378 (53%), Gaps = 28/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
++ D + ++ C + + K VH Y ++ ++ +++L +++MY KCG + +A
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENAL 491
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF+ M ++ + SW+ +I G A NGL + L +F +M+ G+ PNE TF+ V AC
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 551
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E HF SM + GI P +HY +V +LG+ G L EA++ IE +P P W A
Sbjct: 552 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES-MPMAPDVATWGA 610
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDP--------------SKADPKKIPTP-------PP 491
L + HGD ++ + +++L P SK D + +
Sbjct: 611 LLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGV 670
Query: 492 KKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQ 545
K S+++ + EF +P + + + L + ++K Y PDT V DID+
Sbjct: 671 VKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDE 730
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
E KE L HSE+LAIA+GL++ TP+RI+KNLR+C DCH A K++S+ RE++VRD
Sbjct: 731 EEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRD 790
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFH+FK+G CSC DYW
Sbjct: 791 RHRFHYFKEGACSCMDYW 808
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G +++A +L D+ D+ + ++ E AK + D Q I V +N +I
Sbjct: 190 GNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNI----VASNSMI 245
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+ GK G + +A ++F+ M ++ M SW +I+GY NG+ +E L +F +M G++ +E
Sbjct: 246 VLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEV 305
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQ 435
++V SAC ++ M I G E Y+ L+ + G + +AQ+
Sbjct: 306 VVVSVLSACAHLSIVKTG-----KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQK 360
Query: 436 F 436
Sbjct: 361 L 361
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 36/179 (20%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA IE+ G++ D ++ C + + K +H ++ I +
Sbjct: 281 QNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVN 340
Query: 314 LNNKVIEMYG-------------------------------KCGSMTDARRVFDHMADRS 342
L N +I MY KCGS+ AR +FD M ++
Sbjct: 341 LQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKD 400
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW +I+GYA + E L LF +M+ ++P+E ++V SAC A+++ ++H
Sbjct: 401 IVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVH 459
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+C L E G K++HD+ L+ D+ + N +I MY CG+M DAR++FD
Sbjct: 150 ACAVRLLEFGG--------KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE 201
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
SW+ ++ GY G +E +F+QM
Sbjct: 202 SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM 233
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 207/400 (51%), Gaps = 38/400 (9%)
Query: 258 QEGKVKEAIELMDKGVKADA----SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G ++AI L + K + ++ C K VHD + + ++
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIF 445
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ +I+MY KCGS+T+A+R+F M +++ +W+ MI+GY +G G E L LF +M
Sbjct: 446 VSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSR 505
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P TFL+V AC A + E F SM + G P EHY +V +LG+ G+L +A
Sbjct: 506 VSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKA 565
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
FI +K+P EP W AL IH D +L A + + +LDP
Sbjct: 566 LDFI-RKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSA 624
Query: 483 ----PKKIPTPPPKKRTAISILDGKSRLVEFRN---------------PTLYRDDEKLKA 523
P+ KR ++ G + L+E N +Y EKL
Sbjct: 625 GQNYPEAASVRGVVKRRKLAKTPGCT-LIEVANTLHIFTSGDQSHPQATAIYAMLEKLTG 683
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+M+E+ + +T LHD+++E KE + HSE+LAIA+GLI++ T +RIIKNLRVC
Sbjct: 684 --KMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVC 741
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K +S+I R ++VRD RFHHFKDG CSCGDYW
Sbjct: 742 LDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E V+ EL+ G K ++S L + + +H + +S + + ++ +
Sbjct: 290 ESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTAL 349
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+Y + + AR +FD +++S+ SW+ MI+GYA NGL ++ + LF++M+K ++PN
Sbjct: 350 TTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNP 409
Query: 379 QTFLAVFSACGSADAIEEA-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
T ++ SAC A+ I+ ES +S +S L+ + KCG + EA
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVST------ALIDMYAKCGSITEA 463
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
Q+ +P E A W A+ + +HG
Sbjct: 464 QRLFSM-MP-EKNAVTWNAMISGYGLHG 489
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL + + ++ Y K + AR+VFD M +R W+ M++G N DE + +F M
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
K G+ + T AV G A+ + A + + + + G GL + KCG
Sbjct: 200 KGGIGFDSTTVAAVLP--GVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGE 257
Query: 430 LFEAQQFIEQ 439
+ A+ Q
Sbjct: 258 IETARLLFGQ 267
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
+Y KCG + AR +F + + S++ MI+GY N + ++LF+++ G + N +
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310
Query: 381 FLAVF 385
+ +
Sbjct: 311 IVGLI 315
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 208/380 (54%), Gaps = 32/380 (8%)
Query: 260 GKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ EA+ L +GV+ D +L C ++ H Y ++ + G+L
Sbjct: 75 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAG 134
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++++Y KCGS+ A +VFD M ++S+ SW +I G A NG G E L+LF+++ + GL
Sbjct: 135 NALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLM 194
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+E TF+ V AC ++E F +F+ MK E+GI P EHY +V +LG+ G + +A +
Sbjct: 195 PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE 254
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPK 484
FI Q +P +P A W L IHG + L + A ++ L+P A +
Sbjct: 255 FI-QNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQ 313
Query: 485 KIPTPPPKKRTAI----------SILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MK 528
+ +RT + S+++ ++RL EF +P KL + + +K
Sbjct: 314 RWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLK 373
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
YVP VL DI++E KE AL YHSE++AIA+ LI+T A P+R++KNLRVC DCH
Sbjct: 374 LEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHL 433
Query: 589 AIKIMSRIVGRELIVRDNKR 608
AIK++S++ RE++VRD R
Sbjct: 434 AIKLISKVFDREIVVRDRSR 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 12/194 (6%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+KVH +++ + + N ++ MY CG A ++F+ MA+R++ +W+ +INGYA
Sbjct: 14 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 73
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISP 412
NG +E L LF +M G++P+ T +++ SAC A+ A ++ + + +
Sbjct: 74 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 133
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
G L+ + KCG + +A + ++ E + W +L ++G A EL
Sbjct: 134 GN----ALLDLYAKCGSIRQAHKVFDEM--EEKSVVSWTSLIVGLAVNG---FGKEALEL 184
Query: 473 MVDLDPSKADPKKI 486
+L+ P +I
Sbjct: 185 FKELERKGLMPSEI 198
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 217/394 (55%), Gaps = 33/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K E++ K ++ D+ + E A+ + Y +S R D +N +
Sbjct: 269 EEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGL 328
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCGS+ AR VFD +AD+ + W +MI GY +G G E + L+ +M++ G+ PN+
Sbjct: 329 IDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 388
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + +AC ++ ++E + F M + GI P +HY +V +LG+ G+L +A FI
Sbjct: 389 GTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI- 446
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------------- 478
+P +P W AL + +IH + L + A E + LDP
Sbjct: 447 MSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWT 506
Query: 479 SKADPKKIPT-PPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
A+ + + T K S ++ L F ++ ++ + ++L+ ++K
Sbjct: 507 RVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLE--KRLKA 564
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVP VLHD++ E E+ L +HSERLA+AYG+IST T LRI KNLR C +CH+A
Sbjct: 565 AGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSA 624
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S++V RE+I+RD KRFHHFKDG CSCGD+W
Sbjct: 625 IKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 279 CFYTLFEL--CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD 336
CF L+ L CG K++H + ++ + N ++ MY K G ++ AR VFD
Sbjct: 85 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 144
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
+ DR++ SW +I+GY NG E L +F++MR+ ++P+ ++V +A + + + +
Sbjct: 145 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 204
Query: 397 A-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
IH + ++ G+ + + L + K G L E +F ++ +P W A+
Sbjct: 205 GKSIH--GLVTKLGLEFEPDIVISLTTMYAKRG-LVEVARFFFNRME-KPNLILWNAM 258
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V++ + MY K G + AR F+ M ++ W+ MI+GYA+NG G+E ++LF +M
Sbjct: 222 DIVIS--LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI 279
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
++ + T + A ++E A ++ KSE+ T GL+ + KCG
Sbjct: 280 TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEY--RDDTFVNTGLIDMYAKCGS 337
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ A+ ++ + W + +HG
Sbjct: 338 IYLARCVFDR--VADKDVVLWSVMIMGYGLHG 367
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A + F +++ + W+ +I GY + D ++++ M+ + PN TFL V
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 386 SACG--SADAIEEAFIHFESMKSEFG 409
ACG S + I + IH ++ K FG
Sbjct: 93 KACGGTSVEGIGKQ-IHGQTFKYGFG 117
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 207/393 (52%), Gaps = 30/393 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK I++ +GVK + + C ++ +++H +++ GD+ + + +
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 433
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG + DA VFD + R SW+ +I GY+ +G G + L+ FE M G P+E
Sbjct: 434 VDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDE 493
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V SAC IEE HF S+ +GI+P EHY +V +LG+ G E + FIE
Sbjct: 494 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 553
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI------------ 486
+ + WE + ++HG+I+ + A + +L+P + D I
Sbjct: 554 E-MKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEP-EIDSNYILLSNMFAAKGMW 611
Query: 487 ----------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMKEST 531
T KK S ++ ++ F +P + KL+ L+Q S
Sbjct: 612 DDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSV 671
Query: 532 -YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y P+T +VLH++ K++ L YHSERLA+A+ L+ST R +RI KNLR+CGDCH+ +
Sbjct: 672 GYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFM 731
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S I +EL+VRD FHHFK+G CSC ++W
Sbjct: 732 KSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I+L+ +G + + F ++ + C + K +H ++S I D L N ++ +Y KC
Sbjct: 180 IQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC 239
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GS A +VF + +R + SW +I G+ G G GL++F QM G PN TF+++
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISIL 298
Query: 386 SACGSADAIE 395
+C S ++
Sbjct: 299 RSCSSLSDVD 308
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +G + F ++ C + + K+VH +++++ G+ + +++MY K
Sbjct: 281 QMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNR 340
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA +F+ + R + +W +++ GYA +G G++ ++ F QM++ G++PNE T + S
Sbjct: 341 FLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 400
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
C ++ SM + G S LV + KCG + +A+
Sbjct: 401 GCSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 447
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H + D++++N + MY K S+ + + F M ++ S + +++G+ D
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD 168
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGT 414
D+G ++ Q+ G +PN TF+++ C S D E IH + +KS GI+P +
Sbjct: 169 TETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKS--GINPDS 226
Query: 415 EHYLGLVGVLGKCG 428
+ LV V KCG
Sbjct: 227 HLWNSLVNVYAKCG 240
>gi|302792230|ref|XP_002977881.1| hypothetical protein SELMODRAFT_107359 [Selaginella moellendorffii]
gi|300154584|gb|EFJ21219.1| hypothetical protein SELMODRAFT_107359 [Selaginella moellendorffii]
Length = 464
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 206/392 (52%), Gaps = 32/392 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+ ++EL K G K F + + CG + +H + S ++ D+VL N +
Sbjct: 74 RTSMELFKKMDVEGYKPTRFTFMSAVDACGKLSALREGRVLHSSIMNSALKWDIVLQNGI 133
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ M+G+CGS+ ++ F M R SW +MI+ +A NG G E L+ F M G P+E
Sbjct: 134 VNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHNGHGTEALETFLAMNLDGQTPDE 193
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+++ S C A + +A H M ++ + PG +HY+ LV +L + G L A++ +E
Sbjct: 194 LTFVSILSVCAHAGLLRDARGHLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVE 253
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+P+EP W L ++ GD+ + + DP + P
Sbjct: 254 -TMPYEPHGSAWLTLLAACKMQGDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVN 312
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFRNPTL----YRDD--EKLKALNQMKEST 531
K + KK+ S ++ R+ EF+ + +RD E ++ +M E+
Sbjct: 313 EMRIVRKAMEERGIKKQAGCSYIEVHDRVHEFKAGEVSHPRHRDILYELMQIQRKMVEAG 372
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YV DTR V +D+++E KE L YHSE+LAI GL++T T LR++KNLRVC DCH AIK
Sbjct: 373 YVRDTRLVSYDLEEEEKENLLTYHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIK 432
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+SRI GR ++VRD RFHHF+DG CSC DYW
Sbjct: 433 FISRICGRRIVVRDCNRFHHFEDGVCSCNDYW 464
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V N ++ Y + G + +FD M DR SW ++ YA + ++LF++M
Sbjct: 27 VTWNVLMAAYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVE 86
Query: 373 GLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G +P TF++ ACG A+ E +H M S ++ G+V + G+CG +
Sbjct: 87 GYKPTRFTFMSAVDACGKLSALREGRVLHSSIMNSALKWDIVLQN--GIVNMFGRCGSVE 144
Query: 432 EAQQFIEQKL 441
E+ ++ L
Sbjct: 145 ESSSAFQEML 154
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 209/385 (54%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ K +K + ++ C + K +H Y + + + +N +I+M+ KCG
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA +F+ M + +W MI YA++G ++ + +FE+MR +QP+E TFL + +
Sbjct: 280 SLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE +F M S+FGI P +HY +V +L G+L +A +FI+ KLP PT
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFID-KLPISPT 398
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------------PP 490
W L H ++DL + E + +LD S I +
Sbjct: 399 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
Query: 491 PKKRTAISILDGKSRLVE------FRNPTLYRDDEKL-KALNQM----KESTYVPDTRYV 539
K R A+ + S V F + KL +AL++M K S YVPDT V
Sbjct: 459 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 518
Query: 540 LH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
+H +++ + KE L YHSE+LAI +GL++TP T +R++KNLRVC DCHNA K++S I G
Sbjct: 519 VHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFG 578
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R+++ RD +RFHHF+DGKCSCGD+W
Sbjct: 579 RKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+++ G+ D F +L + C K E +++H ++ + ++ + +I MY +C
Sbjct: 118 VEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC 177
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ AR VFD + + + ++ MI GYA +E L LF +M+ L+PNE T L+V
Sbjct: 178 EDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
S+C +++ +IH + K F + L+ + KCG L +A E K+ ++
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSF--CKYVKVNTALIDMFAKCGSLDDAVSIFE-KMRYK 294
Query: 445 PTAEFWEALRNYARIHG 461
T + + YA HG
Sbjct: 295 DTQAWSAMIVAYAN-HG 310
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
SM+ AR +F+ M++ + ++ M GY+ E LF ++ + G+ P+ TF ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC A A+EE +H SMK G+ L+ + +C + A+ ++ + E
Sbjct: 137 KACAVAKALEEGRQLHCLSMK--LGLDDNVYVCPTLINMYTECEDVDSARXVFDRIV--E 192
Query: 445 PTAEFWEAL-RNYAR 458
P + A+ YAR
Sbjct: 193 PCVVCYNAMITGYAR 207
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 220/414 (53%), Gaps = 34/414 (8%)
Query: 241 AGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENA 296
AG + + + L Q G+ + A+ +++ + ++ ++ C + E
Sbjct: 308 AGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQG 367
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K++H ++ + D + +I+ YGKCGS AR VF+ + + + S + MI YA N
Sbjct: 368 KQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQN 427
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G G E LQLF M+ GL+PN T+L V SAC +A +EE F S ++ I +H
Sbjct: 428 GFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDH 487
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y +V +LG+ G L EA+ I Q + W L + RIHGD+++ ++DL
Sbjct: 488 YACMVDLLGRAGRLKEAEMLINQVNISDVV--IWRTLLSACRIHGDVEMAKRVMNRVIDL 545
Query: 477 DPSKADPKKIPTPPPKKRTAIS-ILDGKSRLVEFR---NPTL------------------ 514
P + + S +++ KS + E R NP +
Sbjct: 546 APEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWS 605
Query: 515 ---YRD-DEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-ST 568
+RD EKL+ L ++KE YVPDTR+VL D+D+E K ++L YHSE+LA+A+ L S
Sbjct: 606 HPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSN 665
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
T +RI+KNLRVCGDCH +K +S+IVGR++I RD KRFHHF++G CSCGDY
Sbjct: 666 YKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A + G+ KEAI++ + G+ D F ++F+ + ++ H QS +
Sbjct: 149 IASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG---QSVV 205
Query: 309 RG----DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
G ++ + + +++MY K G M DAR V D + + + + +I GY+ +G E LQ
Sbjct: 206 LGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQ 265
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+F M K G++ NE T +V CG+ + + IH
Sbjct: 266 VFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIH 302
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L + C K + K+ + L+ L NK+I+ Y KCGS+ AR+VFD +
Sbjct: 81 YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 138
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
R + +W+ MI Y NG E + ++++M G+ P+E TF +VF A + E
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
H +S+ G+S ++G LV + K G + +A+ +Q
Sbjct: 199 AHGQSVVLGVGVS---NVFVGSALVDMYAKFGKMRDARLVSDQ 238
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDY--FLQSTIRGDLVLNNK 317
GK+++A + D+ V D F L + G E+ + + + + I + +
Sbjct: 227 GKMRDARLVSDQVVGKDVVLFTAL--IVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSS 284
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDS---WHLMINGYADNGLGDEGLQLFEQMRKLGL 374
V+ G +T R + + ++S W +I G NG + L F QM + +
Sbjct: 285 VLVCCGNLEDLTSGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSI 344
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
PN T +V AC S +E+ IH MK FG+ + Y+G L+ GKCG
Sbjct: 345 TPNSFTLSSVLRACSSLAMLEQGKQIHAIVMK--FGLD--IDKYVGAALIDFYGKCG 397
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 214/406 (52%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDKGV------KADASCFYTLFELCGNPKWYENAKKVHDYFL 304
A +A + GK EA+EL + + ++ ++ + C E K +H Y L
Sbjct: 245 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 304
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ + L + + +I MY +CG + + +FD M + + W+ +I+ Y +G G + ++
Sbjct: 305 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 364
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+FE+M G P+ +F++V AC +EE FESM E GI P EHY +V +L
Sbjct: 365 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 424
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD-- 482
G+ L EA + IE L EP + W +L RIH ++L + A + + L+P+ A
Sbjct: 425 GRANRLDEAAKIIED-LRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNY 483
Query: 483 -------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR-DDEKLK 522
K + + +K S ++ + ++ F + + E+L
Sbjct: 484 VLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLH 543
Query: 523 AL-----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
AL N+MK+ Y P T+ VL+D+DQE KE+ +L HSE+LA+A+GLI+T +RI
Sbjct: 544 ALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRIT 603
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH+ K +S+ RE++VRD RFHHFKDG CSCGDYW
Sbjct: 604 KNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPK----WYENAKKVHDYFLQST 307
L G+ + +EL + GV +D + L + C + + + K++H + L+
Sbjct: 145 LALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHG 204
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + +++MY + G ++ A VFD M +++ SW MI YA NG E L+LF
Sbjct: 205 YGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFR 264
Query: 368 QMR--KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVL 424
+M PN T ++V AC + A+E+ IH ++ G+ L+ +
Sbjct: 265 EMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR--GLDSILPVISALITMY 322
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+CG L E+ Q I ++ + W +L + +HG
Sbjct: 323 ARCGKL-ESGQLIFDRM-HKKDVVLWNSLISSYGLHG 357
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC++G +K+A+ L+ L +A VH + D L
Sbjct: 48 LCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLA 107
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I M+ + ++ +AR+VFD R++ W+ + A G G++ L+L+ +M +G+
Sbjct: 108 TKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVS 167
Query: 376 PNEQTFLAVFSACGSADAI 394
+ T+ + AC +++ +
Sbjct: 168 SDRFTYTYLLKACVASECL 186
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 215/385 (55%), Gaps = 31/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M +G + D F T+ C E +VH +++ + D+V+ + +++MY KCG
Sbjct: 399 MMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGR 458
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A R F+ M R++ SW+ MI+GYA +G GD L+LF +M+ G P+ TF+ V SA
Sbjct: 459 IDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSA 518
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C ++E F +F+SM +G+ P EHY +V +LG+ G L + + FI K+P +P
Sbjct: 519 CSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFI-NKMPIKPNI 577
Query: 448 EFWE-ALRNYARIHG-DIDLEDHAEELMVDLDPSKA---------------------DPK 484
W L R +G +L A E++ ++DP A +
Sbjct: 578 LIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRR 637
Query: 485 KIPTPPPKKRTA---ISILDGKSRLVEFRN--PTLYRDDEKLKALN-QMKESTYVPDTRY 538
+ KK +++ DG V N P KLK L+ +++++ YVP ++
Sbjct: 638 AMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKF 697
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
L+D++ E KE+ L YHSE+LA+A+ +++ + P+RI+KNLRVCGDCH+A K +S++V
Sbjct: 698 ALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVD 756
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R +++RD+ RFHHF+DGKCSC DYW
Sbjct: 757 RSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 292 WYENAKKVHDYFLQSTIR-GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
W ++VH Y +++ + + + N +I MY KCG + AR VF M D+ SW+ MI
Sbjct: 117 WRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMI 176
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
G N ++ ++ + MRK GL P+ ++ S+C S I
Sbjct: 177 TGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCI 220
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 262 VKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
V EAIE+ + ++A S F L + + + ++H L+ ++ D + N
Sbjct: 287 VSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENA 346
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMD-SWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ YGK G M + +F M++R + SW+ MI+GY N L + + L M + G +
Sbjct: 347 LLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRL 406
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ TF V SAC + +E +H ++++ E + G+ LV + KCG + A
Sbjct: 407 DCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGS----ALVDMYSKCGRIDYA 462
Query: 434 QQFIEQKLPFEPTAEFWEALRNYAR-IHGD 462
+F +P + + YAR HGD
Sbjct: 463 SRFFNL-MPVRNLYSWNSMISGYARHGHGD 491
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A H L+ DL L N +I +Y + G AR++FD M DR+ +W +I+GY
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG+ ++ + ++M G PN F + AC
Sbjct: 78 QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRAC 111
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E VK + G+ + C + ++ H ++ + D+ ++N
Sbjct: 184 CFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSN 243
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG-DEGLQLFEQMRKLGLQ 375
++ +Y + + + ++VF M +R SW+ +I AD+G E +++F +M + G
Sbjct: 244 TLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWS 303
Query: 376 PNEQTFLAVFSACGS 390
PN TF+ + + S
Sbjct: 304 PNRVTFINLLATVSS 318
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 218/388 (56%), Gaps = 45/388 (11%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEM 321
+ L +K V+ D + TLF+ C + A K+ D + T++ L+L+ N VI M
Sbjct: 493 VMLSEKDVRPDWVTYVTLFKGCADL----GANKLGDQIIGRTVKVGLILDTSVANAVITM 548
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG + +AR+VFD + + + SW+ MI GY+ +G+G + +++F+ + K G +P+ ++
Sbjct: 549 YSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 608
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+AV S C + ++E +F+ MK ISPG EH+ +V +LG+ GHL EA+ I++ +
Sbjct: 609 VAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDE-M 667
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP-- 483
P +PTAE W AL + +IHG+ +L + A + + +L D K+D
Sbjct: 668 PMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSA 727
Query: 484 ---KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKESTYVPD 535
K + KK S ++ +++ F+ +P + +KL L + +
Sbjct: 728 QIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELME-----KIAR 782
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
YV D ++ ++HSE+LA+A+GL+S PA P+ I+KNLR+CGDCH IK++S
Sbjct: 783 LGYVRTD-----SPRSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISS 837
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ GRE ++RD RFHHF G CSCGDYW
Sbjct: 838 VTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G+V+EA++++ KGV+ D++ + + C K++H +++
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + + ++E+Y KCG +A+ VF+ + DR+ +W ++I G+ +G E ++LF Q
Sbjct: 302 CIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQ 361
Query: 369 MRKLGLQPNEQTFLAVFSACGS 390
MR + ++ + S C S
Sbjct: 362 MRAELMTLDQFALATLISGCCS 383
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 253 LARLCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G E++EL ++ + D TL C + +++H L+S
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 309 RGDLVLNNKVIEMYGKC-------------------------------GSMTDARRVFDH 337
+V++N +I MY KC G++ AR FD
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDG 462
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACG--SADAI 394
M+ +++ +W+ M+ Y +G ++GL+++ M + ++P+ T++ +F C A+ +
Sbjct: 463 MSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKL 522
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ I + G+ T ++ + KCG + EA++ +
Sbjct: 523 GDQII---GRTVKVGLILDTSVANAVITMYSKCGRILEARKVFD 563
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N ++ Y K G ++DA +F M R + SW+ +++GY + L+ F M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G PN TF +CG+ A + M +FG ++ LV + +CG
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLA-LQLLGMVQKFGSQDDSDVAAALVDMFVRCGT 188
Query: 430 L-FEAQQFIEQKLPFEPTAEFWEA-LRNYARIHGDIDLEDHAEEL 472
+ ++ F+ K EPT + L Y + +G DHA EL
Sbjct: 189 VDLASRLFVRIK---EPTIFCRNSMLVGYVKTYG----VDHALEL 226
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y K + A +FD M +R + SW++M++ + +G E L + M+ G++
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+ T+ + +AC ++ +H + +++ I P LV + KCG EA+
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVAS--ALVELYAKCGCFKEAK 325
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 207/393 (52%), Gaps = 37/393 (9%)
Query: 264 EAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+ L + + D F ++ +C + + E K +H L+ + + + +I
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALI 269
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+Y KCG + A +VFD + R++ W+ M+ A + LFE+M +G++PN
Sbjct: 270 SLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFI 329
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
FL+V AC A +E+ +F M+ ++GI P TEHY LV +LG+ G L EA I+Q
Sbjct: 330 XFLSVLYACSHAGLVEKGREYFSLMR-DYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQ 388
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------- 483
+P PT W AL RIH D ++ + ++++D S +
Sbjct: 389 -MPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEE 447
Query: 484 -----KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL--------NQMKES 530
K + KK T +S ++ +++ F R K + +M+++
Sbjct: 448 AARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGD--RSHAKWVEIYEKLEELEEEMEKA 505
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YV DT +VL +D E K + + YHSERLAIA+GLI+ P P+R++KNLRVCGDCH AI
Sbjct: 506 GYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAI 565
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K MS+ GR LIVRDN RFH F+DGKCSCGDYW
Sbjct: 566 KFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+++ GV+ D + + + CG + + K VH +++ D+ + + +++MY KCG
Sbjct: 117 MLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGE 176
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR +FD M +R++ SW MI GYA G E L LF+Q + N+ TF +V
Sbjct: 177 IGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRV 236
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
C S+ +E IH +K F S ++G L+ + KCG + A Q ++
Sbjct: 237 CSSSTFLELGKLIHGLCLKMSFDSSS----FVGSALISLYSKCGVIEGAYQVFDE 287
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + L+ ++ ++++ +I +Y K + +VFD +S +W +I+ +A N
Sbjct: 46 QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNE 105
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM-KSEFGISPGTEH 416
LQ F +M G++P++ + + ACG F+ + KS ++ T +
Sbjct: 106 APLLALQFFRRMLNDGVRPDDHIYPSATKACG--------FLRRSDVGKSVHCLAVKTGY 157
Query: 417 YL------GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
Y LV + KCG + +A+ ++ +P E W + I+G L+D E
Sbjct: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDE-MP-ERNVVSWSGM-----IYGYAQLDDGVE 210
Query: 471 ELMV 474
L +
Sbjct: 211 ALTL 214
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 213/406 (52%), Gaps = 42/406 (10%)
Query: 253 LARLCQEGKVKEAI---ELM-DKGVKADASCFYTLFELCGNPKWYENAKKVH----DYFL 304
+A Q G EA+ ELM ++GV D + ++ + C E K+VH D
Sbjct: 308 IAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAF 367
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
Q T L N ++ MYGKCG + AR +FD A S+ +W+ MI YA + + +
Sbjct: 368 QVT-----ELANSLVNMYGKCGILDVARSIFDKTAKGSV-TWNAMIGAYAQHSHEQQAFE 421
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
LF MR G +P+ TF++V SAC +A EEA +F M+ + G+ PG HY +V L
Sbjct: 422 LFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESL 481
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---- 480
GK G L +A+ I Q +PFEP W + R HGD+ A + + +DP
Sbjct: 482 GKAGRLSDAEALI-QGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGY 540
Query: 481 -------ADP----------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDD 518
AD K + +K SI+ + + EF NP
Sbjct: 541 VALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIF 600
Query: 519 EKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
++LK L+ +MK + Y PD +V HD++ KE L HSERLAIA+G+IST TPLRI+
Sbjct: 601 DELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIM 660
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH K+ S+I RE+IVRD+ RFHHFK+G CSC D+W
Sbjct: 661 KNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q G++ AI+ + K AD + + C +++H + + D+ ++N
Sbjct: 15 QLGQIAAAIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNH 74
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MYGKCGS+ +AR VF+ +++ SW ++I A +G E L LF +M K G+QP+
Sbjct: 75 LVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPH 134
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+F A +AC + A ++ +G LV + KCG L E+ +
Sbjct: 135 SVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTF 194
Query: 438 EQKLPFEPTAEFWEAL 453
E E A W A+
Sbjct: 195 ESMT--ELNAVSWNAM 208
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + + EA+ + K G++A + + TL P ++A+ +HD L++
Sbjct: 207 AMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRT 266
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D+V N ++ MYGKCG + DA +F M+ + +W+ MI Y+ +G E L+ +
Sbjct: 267 GFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFY 324
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
E M++ G+ P++ T+++V AC + +E +H F + TE LV + G
Sbjct: 325 ELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV---TELANSLVNMYG 381
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG L A+ ++ T W A+
Sbjct: 382 KCGILDVARSIFDKTAKGSVT---WNAM 406
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 253 LARLC-QEGKVKEAI----ELMDKGVKADASCFYTLFELC-GNPKWYENAKKVHDYFLQS 306
L +C Q G+ +EA+ E++ +G++ + F C P++ + +H +
Sbjct: 106 LITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRY 165
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +V ++ MY KCGS+ ++ + F+ M + + SW+ MI +A++ G E L+
Sbjct: 166 GFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTL 225
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
++M G++ T++ + SA ++ A +IH +++ F + ++ + G
Sbjct: 226 QKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF----DQDVVNVILNMYG 281
Query: 426 KCGHLFEAQQFIE 438
KCG L +A+ +
Sbjct: 282 KCGCLQDAEAMFK 294
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 217/394 (55%), Gaps = 33/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K E++ K ++ D+ + E A+ + Y +S R D +N +
Sbjct: 284 EEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGL 343
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCGS+ AR VFD +AD+ + W +MI GY +G G E + L+ +M++ G+ PN+
Sbjct: 344 IDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 403
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + +AC ++ ++E + F M + GI P +HY +V +LG+ G+L +A FI
Sbjct: 404 GTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI- 461
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------------- 478
+P +P W AL + +IH + L + A E + LDP
Sbjct: 462 MSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWT 521
Query: 479 SKADPKKIPT-PPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKE 529
A+ + + T K S ++ L F ++ ++ + ++L+ ++K
Sbjct: 522 RVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLE--KRLKA 579
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVP VLHD++ E E+ L +HSERLA+AYG+IST T LRI KNLR C +CH+A
Sbjct: 580 AGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSA 639
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S++V RE+I+RD KRFHHFKDG CSCGD+W
Sbjct: 640 IKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 279 CFYTLFEL--CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD 336
CF L+ L CG K++H + ++ + N ++ MY K G ++ AR VFD
Sbjct: 100 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 159
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
+ DR++ SW +I+GY NG E L +F++MR+ ++P+ ++V +A + + + +
Sbjct: 160 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 219
Query: 397 A-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
IH + ++ G+ + + L + K G L E +F ++ +P W A+
Sbjct: 220 GKSIH--GLVTKLGLEFEPDIVISLTTMYAKRG-LVEVARFFFNRME-KPNLILWNAM 273
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V++ + MY K G + AR F+ M ++ W+ MI+GYA+NG G+E ++LF +M
Sbjct: 237 DIVIS--LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI 294
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
++ + T + A ++E A ++ KSE+ T GL+ + KCG
Sbjct: 295 TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEY--RDDTFVNTGLIDMYAKCGS 352
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ A+ ++ + W + +HG
Sbjct: 353 IYLARCVFDR--VADKDVVLWSVMIMGYGLHG 382
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 288 GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMD 344
G+ + K + ++Q + G +I+ C G + A + F +++ +
Sbjct: 7 GSSWMFMLLKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDIL 66
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG--SADAIEEAFIHFE 402
W+ +I GY + D ++++ M+ + PN TFL V ACG S + I + IH +
Sbjct: 67 LWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQ-IHGQ 125
Query: 403 SMKSEFG 409
+ K FG
Sbjct: 126 TFKYGFG 132
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 212/407 (52%), Gaps = 37/407 (9%)
Query: 251 ADLARLCQEGKVKEA----IELMDKGVKA-DASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A ++ L Q G +A +E+ +G+ D ++ C N +E K++H +
Sbjct: 208 ALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVIT 267
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
L ++N +I+MY KC + A+ +F M + + SW +I G A +G +E L L
Sbjct: 268 LGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALAL 327
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
+++M G++PNE TF+ + AC A + + F +M + GISP +HY L+ +
Sbjct: 328 YDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFS 387
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+ GHL EA+ I + +P P W AL + + HG+ + + +++L P DP
Sbjct: 388 RSGHLDEAENLI-RTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPE--DPSS 444
Query: 484 ---------------------KKIPTPPPKKRTAISILD-GKSRLVEFRNPTLYRDDEKL 521
K + T KK S +D GK V + T + +++
Sbjct: 445 YILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEI 504
Query: 522 KAL-----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
L +M++ Y PDT VLHD+DQ+ KE+ L +HSERLA+AYGL+ T +RI
Sbjct: 505 IGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRI 564
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+KNLRVCGDCH +K++S I RE+ VRD KR+HHFKDG CSC D+W
Sbjct: 565 VKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWY--ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
L+ G D F +L + C N + K+VH F S D V+ + +I+MY K
Sbjct: 95 LLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKF 154
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF--LA 383
G R VFD ++ + SW MI+GYA +G E +LF Q P F A
Sbjct: 155 GLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQ------TPYRNLFAWTA 208
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ S + +AF F M+ E GIS L L V+G C +L
Sbjct: 209 LISGLVQSGNGVDAFHLFVEMRHE-GIS--VTDPLVLSSVVGACANL 252
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AKK+H +++ + + N ++ YGKCG + DA ++FD + R +W ++
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+ L + + G P+ F ++ AC
Sbjct: 82 SNRPHRALSISRSLLSTGFHPDHFVFASLVKACA 115
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 212/401 (52%), Gaps = 40/401 (9%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA++L + +GV AD ++ C N E ++VH + + D
Sbjct: 325 QNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAP 384
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + +++MY KCG++ DAR +FD +++ W M+ YA +G G ++LFE+M
Sbjct: 385 LASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEK 444
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PNE T + V SAC + E ++F+ M+ E+GI P EHY +V + G+ G L +A
Sbjct: 445 MTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA 504
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ FIE+ A W+ L + R+H + A E +V L+ A
Sbjct: 505 KNFIEEN-NINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYAT 563
Query: 484 ----------------KKIPTPPPK-----KRTAISILDGKSRLVEFRNPTLYRDDEKLK 522
+K+ P + K T + + G + ++ +Y EKL
Sbjct: 564 NNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDAS--HPQSAEIYAYLEKL- 620
Query: 523 ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+ ++KE Y T V+HD++ E +E AL +HSE+LAIA+G+ISTP+ TPLRI KNLRV
Sbjct: 621 -VERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRV 679
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH AIK +S GRE++VRD RFHHFKD CSC D+W
Sbjct: 680 CEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + + T F L G + +++H L + + GD + + +++MY KCG + A
Sbjct: 239 GVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAA 298
Query: 332 RRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
VFDH + + D +W M+ GY NG +E L LF +M + G+ + T +V +AC
Sbjct: 299 ASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAAC 358
Query: 389 GSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ +E+ +H K + + +V + KCG+L +A+ ++ + A
Sbjct: 359 ANVGMVEQGRQVHGCVEKLWYKLDAPLAS--AIVDMYAKCGNLEDARSIFDRACT-KNIA 415
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
+ L +YA HG + A EL + K P +I
Sbjct: 416 VWTSMLCSYAS-HGQGRI---AIELFERMTAEKMTPNEIT 451
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
+A + C E+ K+VH + L++ + D+VL N V++MY KCG ARRVF
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
MA+R SW++ I +G +QLF++
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDE 203
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 232/422 (54%), Gaps = 41/422 (9%)
Query: 238 QC-PAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKW 292
QC P D V A ++ Q G +EA+EL + G++++ + ++
Sbjct: 218 QCLPERDVV--SCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAA 275
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
++ K+VH++ L+S + +VL N +I+MY KCG++T ARR+FD + +R++ SW+ M+ G
Sbjct: 276 LDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVG 335
Query: 353 YADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS-EFGI 410
Y+ +G G E L+LF M + ++P+ T LAV S C ++ F M S + +
Sbjct: 336 YSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISV 395
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
P ++HY +V +LG+ G + A +F+ +K+PFEP+A W L +H ++D+ +
Sbjct: 396 QPDSKHYGCVVDMLGRAGRVEAAFEFV-KKMPFEPSAAIWGCLLGACSVHSNLDIGEFVG 454
Query: 471 ELMVDLDPSKA-----------------DPKKIPTPPPKKRTAISILDGKSRL------- 506
++ ++P A D + + KK A++ G+S +
Sbjct: 455 HQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKK--AVTKEPGRSWIELDQVLH 512
Query: 507 ----VEFRNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
+ +P K++ L+ + KE+ YVPD VLHD+D+E KE+ LL HSE+LA+
Sbjct: 513 TFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLAL 572
Query: 562 AYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGD 621
+GLI+TP P+R+IKNLR+C DCHN K S+I GRE+ +RD RFH GKCSCGD
Sbjct: 573 TFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGD 632
Query: 622 YW 623
YW
Sbjct: 633 YW 634
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 13/220 (5%)
Query: 258 QEGKVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
+ +++EA+ M +G+ + + T+ C + ++VH + +++ + L
Sbjct: 38 HDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRT 97
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++I Y KC S+ DAR VFD M +R++ SW MI+ Y+ G + L LF QM + G +P
Sbjct: 98 RLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEP 157
Query: 377 NEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEA 433
NE TF V ++C GS+ + IH +K + Y+G L+ + K G + EA
Sbjct: 158 NEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNY----EAHVYVGSSLLDMYAKDGKIHEA 213
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+ I Q LP + YA+ + L++ A EL
Sbjct: 214 RG-IFQCLPERDVVSCTAIISGYAQ----LGLDEEALELF 248
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 113/240 (47%), Gaps = 15/240 (6%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ G + + F T+ C + +++H + ++ + + + +++MY K
Sbjct: 148 VQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKD 207
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + +AR +F + +R + S +I+GYA GL +E L+LF ++++ G+Q N T+ +V
Sbjct: 208 GKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVL 267
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
+A A++ +H ++SE ++ L+ + KCG+L A++ + E
Sbjct: 268 TALSGLAALDHGKQVHNHLLRSEVPSYVVLQN--SLIDMYSKCGNLTYARRIFDT--LHE 323
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKS 504
T W A+ HG+ LM+D + K P T +++L G S
Sbjct: 324 RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVK----------PDSVTVLAVLSGCS 373
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 215/395 (54%), Gaps = 33/395 (8%)
Query: 261 KVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
K +AIEL + G+ + ++ C + + K +H + ++ I L L
Sbjct: 239 KYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLG 298
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N + +MY KCG + +A+ VF M +R + SW ++I G A G +E F +M + GL+
Sbjct: 299 NALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLE 358
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ +F+ + +AC A +++ +F+ M +GI+P EHY +V +L + G L +A+
Sbjct: 359 PNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAES 418
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGD-----------IDLE-DHAEEL---------MV 474
I +P +P W AL RI+ D ++L+ +H+ L M
Sbjct: 419 LI-NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMG 477
Query: 475 DLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMK 528
LD + + ++ K S ++ + + EF +P R ++ L +MK
Sbjct: 478 RLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMK 537
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ Y P T V+H+ID+E KE AL HSE+LA+A+GLI+T T +RI+KNLRVC DCH+
Sbjct: 538 VAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHD 597
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
AIKI+S+IV RE++VRD RFHHFKDGKCSC DYW
Sbjct: 598 AIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F ++ + C +KVH + + +L + N ++++Y K G A+++F
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLF 185
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
D M R + SW+ +I+GY +G+ D+ +F+ M ++ N ++ + S +
Sbjct: 186 DEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARNEKYA 241
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+A F M+ E G++P + LV VL C HL
Sbjct: 242 DAIELFRQMQHEGGLAPND---VTLVSVLSACAHL 273
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 207/393 (52%), Gaps = 30/393 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK I++ +GVK + + C ++ +++H +++ GD+ + + +
Sbjct: 615 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 674
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG + DA VFD + R SW+ +I GY+ +G G + L+ FE M G P+E
Sbjct: 675 VDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDE 734
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V SAC IEE HF S+ +GI+P EHY +V +LG+ G E + FIE
Sbjct: 735 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 794
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI------------ 486
+ + WE + ++HG+I+ + A + +L+P + D I
Sbjct: 795 E-MKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEP-EIDSNYILLSNMFAAKGMW 852
Query: 487 ----------PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMKEST 531
T KK S ++ ++ F +P + KL+ L+Q S
Sbjct: 853 DDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSV 912
Query: 532 -YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y P+T +VLH++ K++ L YHSERLA+A+ L+ST R +RI KNLR+CGDCH+ +
Sbjct: 913 GYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFM 972
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S I +EL+VRD FHHFK+G CSC ++W
Sbjct: 973 KSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 9/183 (4%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ C + K +H ++S I D L N ++ +Y KCGS A +VF + +R
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
+ SW +I G+ G G + LF +MR+ G++ NE T+ AC +E +H
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 402 ESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
E++K + ++ ++G LV + KCG + A++ + +P + A W AL N
Sbjct: 254 EAIK----VGDFSDLFVGSALVDLYAKCGEMVLAER-VFLCMP-KQNAVSWNALLNGFAQ 307
Query: 460 HGD 462
GD
Sbjct: 308 MGD 310
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +G + F ++ C + + K+VH +++++ G+ + +++MY K
Sbjct: 522 QMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNR 581
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA +F+ + R + +W +++ GYA +G G++ ++ F QM++ G++PNE T + S
Sbjct: 582 FLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 641
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
C S A ++ SM + G S LV + KCG + +A+ + + +
Sbjct: 642 GC-SRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 700
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVD 475
+ W + HG A E M+D
Sbjct: 701 S--WNTIICGYSQHGQGGKALKAFEAMLD 727
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q+G+ +EA E+ + GV + +L + + +H +
Sbjct: 401 AIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKY 460
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + N ++ MY K GS+ D RVF+ +R + SW+ +++G+ DN D GL++F
Sbjct: 461 GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIF 520
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIE 395
QM G PN TF+++ +C S ++
Sbjct: 521 NQMLAEGFNPNMYTFISILRSCSSLSDVD 549
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G V E+ +GV+A+ + T + C E K+VH ++ DL + + ++
Sbjct: 212 GAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALV 271
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
++Y KCG M A RVF M ++ SW+ ++NG+A G ++ L LF +M + ++
Sbjct: 272 DLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKF 331
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA-QQFIE 438
T V C ++ + I S+ G LV + KCG +A + F+
Sbjct: 332 TLSTVLKGCANSGNLRAGQI-VHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVR 390
Query: 439 QKLPFEPTAEFWEAL 453
+ +P W A+
Sbjct: 391 IE---DPDVVSWSAI 402
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
T+ + C N + VH ++ D ++ +++MY KCG DA +VF + D
Sbjct: 335 TVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDP 394
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ SW +I G E ++F++MR G+ PN+ T ++ SA
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSA 440
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 213/372 (57%), Gaps = 36/372 (9%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C N + + +H Y +++I+ D VL +++MY KCG + A VF+ M+++
Sbjct: 259 SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK 318
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW+ MI G A +G ++ + LF +M + PNE TF+ V +AC +++ F
Sbjct: 319 EVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIF 375
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
SM+ E+G+ P EHY +V +LG+ G L EA++ + +P EPT W AL R HG
Sbjct: 376 NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS-IPTEPTPAVWGALLGACRKHG 434
Query: 462 DIDLEDHAEELMVDLDP-------------SKA-------DPKKIPTPPPKKRT-AISIL 500
+++L + +++++L+P +KA + +K+ K T SI+
Sbjct: 435 NVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 494
Query: 501 D-GKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQA 551
D G+ + +F + +Y+ +K+K QM+ Y PD VL DID+E KE A
Sbjct: 495 DLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQME--GYEPDPSQVLFDIDEEEKETA 552
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
+ HSE+LAI +GLI+T T +RI+KNLRVC DCH+A K++S++ RE+IVRD R+HH
Sbjct: 553 VWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHH 612
Query: 612 FKDGKCSCGDYW 623
F++G CSC D+W
Sbjct: 613 FRNGACSCKDFW 624
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+M + + + + + C + +VH + ++ + GD + + I MY G
Sbjct: 148 EMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFG 207
Query: 327 SMTDARRVFDH---------MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+ +ARR+ D M DR G E L++F QM+K ++P
Sbjct: 208 RLVEARRILDDKGGEVDAVCMPDR--------------KGCFMEALEIFHQMQKEKIRPR 253
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQ 434
+ +V SAC + A+++ +IH + ++ + + LG LV + KCG + A
Sbjct: 254 KFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL----DGVLGTSLVDMYAKCGRIDLAW 309
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHG 461
+ E+ E ++ W A+ +HG
Sbjct: 310 EVFEKMSNKEVSS--WNAMIGGLAMHG 334
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCG-----SMTDARRVFDHMADRSMDSWHLMIN 351
K+ H L++ D + +++ Y S + RVFD + ++ W+ MI
Sbjct: 72 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 131
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGI 410
+N + + L+ +M +PN+ T+ AV AC A + E +H +K G
Sbjct: 132 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG- 190
Query: 411 SPGTEHYL-GLVGVLGKCGHLFEAQQFIEQK 440
G H L + + G L EA++ ++ K
Sbjct: 191 --GDGHILSSAIRMYASFGRLVEARRILDDK 219
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 221/437 (50%), Gaps = 45/437 (10%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL----MDKGVKADASCFYT 282
QL++ + P D V ++ D Q G+ EA+ L + GV+ D
Sbjct: 202 GQLDDARGLFDALPRKDLVCWNAMMD--GYTQHGRPSEALRLFRQMLRSGVEPDEVSVVL 259
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV----IEMYGKCGSMTDARRVFDHM 338
E+ + +H + R + LN +V ++MY KCGS+ +A VF +
Sbjct: 260 ALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDL 319
Query: 339 A---DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
DR + +W+ MINGYA +G E L+ F Q+R GL P + TF+ V +AC + ++
Sbjct: 320 GGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVD 379
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
E F +M+ E+GI P EHY +V +LG+ G + EA + Q + +P A W +L
Sbjct: 380 EGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLV-QSMKAKPDAAMWASLLG 438
Query: 456 YARIHGDIDLEDHAEELMVD-----------LDPSKADPKK----------IPTPPPKKR 494
R+H ++ L + +V L A K + +K
Sbjct: 439 ACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKE 498
Query: 495 TAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQE 546
S ++ R+VEF R+ +Y E++ ++ + + +VP T VLHD+D
Sbjct: 499 PGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARAR--GHVPHTELVLHDLDDA 556
Query: 547 AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
AKE+AL HSE+LA+A+GLISTP RT ++I+KNLR C DCH +K++S GR+++ RD
Sbjct: 557 AKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDR 616
Query: 607 KRFHHFKDGKCSCGDYW 623
RFHHF DG CSCGDYW
Sbjct: 617 NRFHHFVDGSCSCGDYW 633
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V ++ Y K G + DAR +FD + + + W+ M++GY +G E L+LF QM +
Sbjct: 188 VVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLR 247
Query: 372 LGLQPNEQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISP--GTEHYLGLVGVL 424
G++P+E + + SA E +F+ ++ ++ GT LV +
Sbjct: 248 SGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGT----ALVDMY 303
Query: 425 GKCGHLFEA-QQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG L EA F + + W A+ N +HG
Sbjct: 304 YKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHG 341
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 219/407 (53%), Gaps = 49/407 (12%)
Query: 260 GKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL-- 312
G+ +EA+ L D V+ +A F +F CG + E +++H + S G+L
Sbjct: 102 GRGQEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDLEQGREIHALAMAS---GELKS 158
Query: 313 ---VLNNKVIEMYGKCGSMTDARRVFDHM----ADRSMDSWHLMINGYADNGLGDEGLQL 365
+L N ++ M+ + GS+ +AR+VFD M A + SW MI A +G GDE L+L
Sbjct: 159 SSPILENALLNMFVRFGSLEEARKVFDAMDHPDAFSNSVSWTAMIAALAQHGQGDEALEL 218
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F++M G+ + TF+ V AC A I+E+ F SM ++ I+P HY + +G
Sbjct: 219 FKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIG 278
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+ G L +A++ I +PF P W+ L N RIH + EL+ L P +
Sbjct: 279 RAGRLQDAEELI-HSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYT 337
Query: 484 -------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDE 519
K + KK S ++ K+++ EF +P+ RD+
Sbjct: 338 LLGNVYAATERYGDQMRVRKSMTDRGLKKVPRKSFIEVKNKVHEFVAGDRAHPS--RDEI 395
Query: 520 KL---KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
L K +M+E+ YVP+T+ VLH +++E KEQ + HSE+LAIA+GLI+TP TPL I
Sbjct: 396 LLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLI 455
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+KNLRVC DCH A K++++I+ R ++VRD RFHH +DG+CSC DYW
Sbjct: 456 VKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHLEDGQCSCKDYW 502
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD---RSM 343
C + K +E ++H + + +L++ N ++ Y KC + +A ++F M++ R++
Sbjct: 29 CSSLKSFERGARIHRWADEHGYGSNLLVQNALVNFYAKCSKIPEAMKLFGEMSERTSRTV 88
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF-IHF 401
SW MI YA +G G E L LF +MRK G ++PN TF VF+ACG + +E+ IH
Sbjct: 89 VSWSAMIGAYALHGRGQEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDLEQGREIHA 148
Query: 402 ESMKS 406
+M S
Sbjct: 149 LAMAS 153
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 191/372 (51%), Gaps = 28/372 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
TL C K++H Y ++ + DL + + +++MY KCG + AR VFD +
Sbjct: 490 LMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP 549
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF 398
R++ +W+++I Y +GLGDE L LF++M G PNE TF+A +AC + ++
Sbjct: 550 RRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGL 609
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
F+ MK ++G P + +V VLG+ G L EA I P E W + R
Sbjct: 610 ELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACR 669
Query: 459 IHGDIDLEDHAEELMVDLDPSKAD--------------------------PKKIPTPPPK 492
+H ++ L A E + +L+P +A + + P
Sbjct: 670 LHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGC 729
Query: 493 KRTAISILDGKSRLVEFRNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQA 551
+ + E +P + + AL +M+ YVPDT VLHD+D+ K
Sbjct: 730 SWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAM 789
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
L YHSE+LAIA+GL+ P +R+ KNLRVC DCH A K +SR+VGRE+++RD +RFHH
Sbjct: 790 LRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHH 849
Query: 612 FKDGKCSCGDYW 623
F+DG CSCGDYW
Sbjct: 850 FRDGTCSCGDYW 861
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G+ +EA+ +++ GV+ D F + C + ++VH + L+
Sbjct: 232 ISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDD- 290
Query: 309 RGDLVLNNKV----IEMYGKCGSMTDARRVFDHMAD--RSMDSWHLMINGYADN-GLGDE 361
DL N+ V ++MY ++ ARRVFD + + R + W+ MI GYA + G+ +E
Sbjct: 291 --DLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEE 348
Query: 362 GLQLFEQMR-KLGLQPNEQTFLAVFSACGSAD 392
++LF +M + G P+E T V AC ++
Sbjct: 349 AIELFSRMEAEAGCAPSETTMAGVLPACARSE 380
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 260 GKVKEAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
G +EAIEL + ++A+A C + C + + + VH Y ++ + +
Sbjct: 344 GMDEEAIELFSR-MEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRF 402
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +++MY + G M +A +F + R + SW+ +I G GL E QL +M+
Sbjct: 403 VQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPS 462
Query: 374 LQPNEQTFL 382
+ +T L
Sbjct: 463 SAASGETML 471
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N ++ MY + G + DA+R+F D +W+ MI+ G +E +Q+ M LG
Sbjct: 196 NALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG 255
Query: 374 LQPNEQTFLAVFSAC 388
++P+ TF + AC
Sbjct: 256 VRPDGVTFASALPAC 270
>gi|302773103|ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
gi|300162480|gb|EFJ29093.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
Length = 331
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 189/334 (56%), Gaps = 34/334 (10%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL--GLQPNE 378
MYGKCGS+ +AR+VF+ DR + W+ MI YA NG G+ LQ+FE+M++ +PN
Sbjct: 1 MYGKCGSVDEARQVFEAFPDRDVALWNSMIAAYAQNGQGEMSLQVFERMKEATNNARPNA 60
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V AC A IE +F SM++ FGI P ++HY ++ +LG+ G+L +A +
Sbjct: 61 ITFVHVLCACSHARLIERGRSYFGSMETVFGIQPSSQHYRCMIDLLGRSGNLDQAWNIL- 119
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---------- 488
+P EP + W + + R H +++L + E + +++P + P + +
Sbjct: 120 HSMPLEPDSLAWTTMLSACRAHSNVELGELCAERLFEMEPEYSAPYVLLSNIYAARDRWD 179
Query: 489 --------------PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMKE 529
P R++I + D V R +Y++ +L +QMK
Sbjct: 180 DVARIRKLMADKGVKKPSGRSSIEVGDKVHEFVAGDRAHPRREEIYQELSRLG--SQMKA 237
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y+ D L D ++E KEQ L YHSE+LAIA+G ++TPAR L +IKNLRVC DCH A
Sbjct: 238 LGYIQDRSSALRDGEEEEKEQMLWYHSEKLAIAFGSVATPARKSLYVIKNLRVCTDCHTA 297
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +SRI GRE+++RD RFHHF+DG CSCGDYW
Sbjct: 298 SKFISRITGREIVLRDPYRFHHFRDGWCSCGDYW 331
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 215/396 (54%), Gaps = 37/396 (9%)
Query: 264 EAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKV 318
EA+E L G + D + C N ++VH L+ I + + +NN +
Sbjct: 326 EALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNAL 385
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY KCG++ DA+ +FD M + + S++ MI GYA +G+G + L LF++M ++G P
Sbjct: 386 IAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTN 445
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF++V +AC +E+ I+F MK +FGI P H+ ++ +LG+ G L EA++ IE
Sbjct: 446 ITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIE 505
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PF+P FW AL RIHG+++L A ++ LDP A P
Sbjct: 506 T-IPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQ 564
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKL-KALNQMKEST 531
K + KK+ S ++ R+ F +P + + E L + + ++K+
Sbjct: 565 DAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVG 624
Query: 532 YVPDTRYVLHDID----QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
Y P+ R L D Q +E L +HSE+LA+++GL+ST P+ + KNLR+C DCH
Sbjct: 625 YTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCH 684
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NAIK +S +V RE+ VRD+ RFH FKDG+CSCG YW
Sbjct: 685 NAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+ +G+ D ++ N + + H ++S + + + +I++Y KC
Sbjct: 229 LEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKC 288
Query: 326 G-SMTDARRVFDHMADRSMDSWHLMINGYAD-NGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G M D R+VFD +++ + W+ MI+GY+ L DE L+ F Q++ +G +P++ + +
Sbjct: 289 GGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVC 348
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQK 440
V SAC + + + +H ++K + P + L+ + KCG+L +A+ +
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDI---PSNRISVNNALIAMYSKCGNLRDAKTLFDT- 404
Query: 441 LPFEPTAEFWEALRNYARIHG 461
+P T + + YA+ HG
Sbjct: 405 MPEHNTVSYNSMIAGYAQ-HG 424
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + K +H +++S + L+N + +Y KC ++ ARRVFDH
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
D ++ S++ +I+ YA + QLF++M QP+ ++ + +A + AF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQ 126
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCG 428
F M+ F G L G++ CG
Sbjct: 127 LFLEMREAFLDMDG----FTLSGIITACG 151
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYAD 355
+++H + + + + + N +I Y K G + +ARR+F ++ DR SW+ M+ Y
Sbjct: 158 RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGT 414
+ G + L+L+ +M GL + T +V +A + D + H + +KS G +
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKS--GYHQNS 275
Query: 415 EHYLGLVGVLGKCG 428
GL+ + KCG
Sbjct: 276 HVGSGLIDLYSKCG 289
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 208/397 (52%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + AI L + +K + A T+ C K VH + ++
Sbjct: 388 QNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIY 447
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ +++MY KCG++++A ++FD M++++ +W+ MI GY +G G E L+L+ +M LG
Sbjct: 448 VSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG 507
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TFL+V AC A + E F +M +++ I P EHY +V +LG+ G L +A
Sbjct: 508 YNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKA 567
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
+FI +K+P EP W L IH D D+ A E + +LDP
Sbjct: 568 LEFI-KKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSV 626
Query: 483 ----PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDE-----------KLKALN-Q 526
PK K+ ++ G + + P ++ + KL+ L +
Sbjct: 627 ERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGK 686
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M+E Y +T LHD+++E KE A+ HSE+LAIA+GLI+T +RIIKNLRVC DC
Sbjct: 687 MREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDC 746
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K +S+I R ++VRD RFHHFKDG CSCGDYW
Sbjct: 747 HTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK EL+ G + +S L L A +H + ++S I + ++
Sbjct: 292 ECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAF 351
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+Y K + AR +FD ++++ +W+ MI+GY NG + + LF++M K PN
Sbjct: 352 TAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNA 411
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T + SAC ++ +KSE + P LV + KCG++ EA Q +
Sbjct: 412 VTITTILSACAQLGSLSFGKWVHHLIKSE-NLEPNIYVSTALVDMYAKCGNISEAWQLFD 470
Query: 439 Q 439
Sbjct: 471 S 471
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ + + ++++Y K + AR+VFD M +R W+ MING N D+ +QLF +M
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL-GLVGVLGKCG 428
G++ + T AV A ++ I ++K FG ++ L GL+ + KCG
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFC---DYVLTGLISLYSKCG 258
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 216/396 (54%), Gaps = 33/396 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK EA+ L D+ GVK + +L C + + +H Y + I + ++
Sbjct: 277 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 336
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG ++ A +VF+ M + + +W+ +I G A +G E QLF++M++ G++
Sbjct: 337 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVE 396
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN+ TF+A+ SAC A ++E + M S +GI P EHY ++ +L + G L EA +
Sbjct: 397 PNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAME 456
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
I +P EP AL RIHG+ +L + + +++L P +
Sbjct: 457 LI-GTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAK 515
Query: 482 ---DPKKI----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMKE 529
D +K+ K +S+++ K + F +P + EKL ++ +
Sbjct: 516 KWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLK 575
Query: 530 ST--YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
S Y DT VL D+++E KE AL HSE+LAIAYGL+ ++ +RI+KNLRVC DCH
Sbjct: 576 SAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCH 635
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ IK++S++ GRE+IVRD RFHHF+DG+CSC D+W
Sbjct: 636 HVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ G + D+ +L L N K AK++ F + R D+V N +I+ Y K
Sbjct: 192 VVKSGFECDSYIVSSLIHLYANGKDLGAAKQL---FNLCSAR-DVVSWNAMIDGYVKHVE 247
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M AR VFD M R + SW+ MINGYA G +E L LF+QMR +G++P E T +++ SA
Sbjct: 248 MGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSA 307
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A+++ +H + ++ I + LV + KCG + A Q + A
Sbjct: 308 CAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLA 366
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W + IHG++ A++L ++ + +P I
Sbjct: 367 --WNTIIAGMAIHGNV---KEAQQLFKEMKEAGVEPNDI 400
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 215/395 (54%), Gaps = 38/395 (9%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+EL + GV D ++ C +VH + + + D+ L +
Sbjct: 195 KEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTAL 254
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG + ++ +VF M + + +W MI G A++GLG + L LF +M GLQPNE
Sbjct: 255 VDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNE 314
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V AC + + +F SM G+ P EHY +V +LG+ GH+ EA + I
Sbjct: 315 ITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELI- 373
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------SKADPKK 485
+ + F+P W L RIH ++++ + A + LDP ++A+ +
Sbjct: 374 RSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWE 433
Query: 486 IPTPPPK--KRTAISILDGKSRLVEFRNPT---------------LYRDDEKLKALNQMK 528
K +R I + G+S +E+ N +Y+ E++ +++++
Sbjct: 434 GVAEMRKTIRRENIQRVPGRSS-IEWENTVHEFVSGDRSHPRIEEIYKMLEEM--MDRLR 490
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
++ Y P T VL DID+++K++AL HSE+LAIA+GL+ TPAR+ LRI KNLR C DCH+
Sbjct: 491 QAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHS 550
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
AIK++S R+LIVRD RFHHF +G+CSC DYW
Sbjct: 551 AIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DLV N +I Y G + AR +FD DR SW MI+ YA E L+L+ +MR
Sbjct: 146 DLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMR 205
Query: 371 KLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G+ P+ + ++V SAC + A+ E ES + E + GT LV + KC
Sbjct: 206 VAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGT----ALVDMYAKC 261
Query: 428 GHL 430
G +
Sbjct: 262 GDI 264
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 213/400 (53%), Gaps = 36/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G AIE+ + G D++ F C + +V + + ++V
Sbjct: 186 QNGLAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVV 245
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++ MY +CG + AR FD + +R++ +W MI GY +G G E ++LF+ MR+ G
Sbjct: 246 LGAALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQG 305
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN+ TF+AV SAC A + + F SMKS +G+ P EHY +V + G+ G L +A
Sbjct: 306 PPPNDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDA 365
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK--------- 484
QFI +P EP E W A+ ++H + L E ++ L+P +
Sbjct: 366 MQFIHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYAL 425
Query: 485 --------KIPTPPPKKRTAISI------LDGKSRLVEF------RNPTLYRDDEKLKAL 524
K+ K+R I + G + + + P +Y+ EKL +
Sbjct: 426 SGKMNHVEKVRNTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKL--I 483
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART-PLRIIKNLRVC 583
+++ ++ Y+P+T VLH++++E +E AL YH E+LA+A+GL+ T T P+RIIKNLR+C
Sbjct: 484 HRITDAGYMPETDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRIC 543
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH AIK MS + RE+IVRD RFHHFK GKCSC +YW
Sbjct: 544 GDCHLAIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + VH + + D + ++ +Y KCG + AR++FD +
Sbjct: 111 FTSVAKACADLSALRAGMGVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIR 170
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---- 395
DRS+ +W+ MI+GY NGL ++++ +MR G P+ TF+A SAC A A++
Sbjct: 171 DRSVVAWNAMISGYEQNGLAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHE 230
Query: 396 -EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
E I E M E + G LV + +CG + +A+++ + + E W ++
Sbjct: 231 VERLIVSERM--EMNVVLGA----ALVNMYARCGLVNKAREWFD--MLQERNVVTWTSMI 282
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDG 502
+HG H E + D + PPP T +++L
Sbjct: 283 AGYGMHG------HGGEAVKLFDLMRQQ-----GPPPNDVTFVAVLSA 319
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 231/446 (51%), Gaps = 44/446 (9%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----D 270
S+ V G+ +++ + P + + + ++ Q G KEA++L +
Sbjct: 178 SWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTM-ISGYVQAGMNKEALQLFHEMQN 236
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
V D + C E K +H Y ++ R D VL +I+MY KCG M +
Sbjct: 237 SNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEE 296
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF +M +S+ W +I+GYA +GLG E + F +M+ +G++PN TF AV +AC
Sbjct: 297 ALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSY 356
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+EE F +++ ++ + P EHY +V +LG+ G L EA +FI QK+P +P A W
Sbjct: 357 TGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFI-QKMPLKPNAVIW 415
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPS-----------KADPKKIPTPPPKKR----- 494
+L +IH +I+L + E+++++D + A KK +R
Sbjct: 416 GSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQ 475
Query: 495 --------TAISI-------LDGKSRLVEFRNP-TLYRDDEKLKALNQMKESTYVPDTRY 538
+AIS+ L G E + T +R + +++E+ YVP+
Sbjct: 476 GVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRR-----KLEENGYVPELED 530
Query: 539 VLHD-IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+L D +D E KE + HSE+LAI YGL+ T T +RI+KNLRVC DCH + ++S+I
Sbjct: 531 MLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIY 590
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
R++++RD RFHHFKDGKCSCGDYW
Sbjct: 591 KRDIVMRDRTRFHHFKDGKCSCGDYW 616
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 37/219 (16%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
+A F L + C N ++ ++H + + D+ N +I Y G+ A +F
Sbjct: 109 NAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLF 168
Query: 336 DHMADRSMDSWHLMI--------------------------------NGYADNGLGDEGL 363
D + + SW+ +I +GY G+ E L
Sbjct: 169 DRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEAL 228
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVG 422
QLF +M+ + P+ + + SAC A+E+ +IH + K+ I + L+
Sbjct: 229 QLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRID--SVLCCVLID 286
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ KCG + EA + + + W AL + HG
Sbjct: 287 MYAKCGEMEEALGVFKNMKT--KSVQVWTALISGYAYHG 323
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 205/395 (51%), Gaps = 30/395 (7%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ K+A+++ + V + + C K VH + D+V
Sbjct: 343 QYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVV 402
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N ++ MY +CGS+ D VF + D+S+ SW +I YA +G GL+ F ++ + G
Sbjct: 403 LENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEG 462
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L ++ T ++ SAC ++E F SM + G++P H+L +V +L + G L A
Sbjct: 463 LAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAA 522
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGD-----------IDLEDHAEELMVDL------ 476
+ I +PF P A W +L + ++H D +LE E V L
Sbjct: 523 ENLI-HDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYA 581
Query: 477 DPSKADP--KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL------NQMK 528
+ + D K +K S ++ + EF +E+L A QMK
Sbjct: 582 EAGRWDDVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMK 641
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
++ YVPD R VLH++ +E KEQ L YHSE+LAIAYGLISTP TPL I+KNLR C DCH
Sbjct: 642 DAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHA 701
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +SRIVGR+++VRD+ RFHHF++G CSC DYW
Sbjct: 702 AAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+K DA F + C +++ + S D ++ N +I MY KCGS+
Sbjct: 157 EGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLES 216
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR+VFD + +R + +W+ MI+GYA G + L+LF++M +PN TF+ + +AC +
Sbjct: 217 ARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTN 276
Query: 391 ADAIEE 396
+ +E+
Sbjct: 277 LEDLEQ 282
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS-T 307
+A + G +EA+ ++ +G++ D + F +C + K + + +H L++
Sbjct: 30 VAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQL 89
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ D++L +I MY +C + AR+ FD M +++ +W+ +I GY+ NG L++++
Sbjct: 90 LEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 368 QMRKL---GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
M G++P+ TF + AC I + E+ G + + L+ +
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACSVVGDISQGR-EIEARTVASGYASDSIVQNALINMY 208
Query: 425 GKCGHLFEAQQFIEQ 439
KCG L A++ ++
Sbjct: 209 SKCGSLESARKVFDR 223
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 258 QEGKVKEAIELMDKGV----KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G +A+EL + K + F L C N + E + +H + DLV
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 314 LNNKVIEMYGKCGS-MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ N ++ MY KC S + +AR+VF+ + R + +W+++I Y G + L +F+QM+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 373 GLQPNEQTFLAVFSACGSADA 393
+ PNE T V SAC A
Sbjct: 361 NVAPNEITLSNVLSACAVLGA 381
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MYGKCGS+ DA VF + + SW L++ +A NG E L + +M GL+P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 381 FLAVFSACGSADAIEEA-FIH---FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
F+ C S+ +++ +H E+ EF I GT L+ + +C L A++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGT----ALITMYARCRDLELARKT 116
Query: 437 IEQKLPFEPTAEFWEAL 453
++ + T W AL
Sbjct: 117 FDEM--GKKTLVTWNAL 131
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 199/380 (52%), Gaps = 33/380 (8%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K D C E + +H + S IR ++ + +I+MY KCGS+ +A
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSAD 392
VF+ + + +W+ MI GYA +G + L+LF +M+ + GLQP + TF+ AC A
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ E FESM E+GI P EHY LV +LG+ G L A + I + + + + W +
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI-KNMNMDADSVLWSS 434
Query: 453 LRNYARIHGDIDLEDHAEELMVDLD--------------PSKADPKKIPT-------PPP 491
+ ++HGD L E ++ L+ S D + +
Sbjct: 435 VLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 494
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQM--------KESTYVPDTRYVLHDI 543
K IS ++ ++++ EFR R+ K K + M K YVP+T VL D+
Sbjct: 495 VKEPGISTIEIENKVHEFRAGD--REHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDL 552
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++ KEQ+L HSERLAIAYGLIST +PL+I KNLRVC DCH K++S+I GR++++
Sbjct: 553 EETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVM 612
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF DG CSCGD+W
Sbjct: 613 RDRNRFHHFTDGSCSCGDFW 632
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
LV + +I Y K G++ AR +FD M +R + SW++MI+GYA +G ++ L LF+++
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 372 LGL-QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G +P+E T +A SAC A+E +IH S I + GL+ + KCG
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR--IRLNVKVCTGLIDMYSKCGS 309
Query: 430 LFEA 433
L EA
Sbjct: 310 LEEA 313
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
VLN K+ Y G + + +F D + + IN + NGL D+ L+ Q+
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ PNE TF ++ +C + IH +K GI P GLV V K G +
Sbjct: 125 EINPNEFTFSSLLKSCSTKSG---KLIHTHVLKFGLGIDPYVA--TGLVDVYAKGGDVVS 179
Query: 433 AQQFIEQ 439
AQ+ ++
Sbjct: 180 AQKVFDR 186
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 222/397 (55%), Gaps = 34/397 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNK 317
E VK ++ G + D F + C N K++H ++S I + + +NN
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNA 386
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I +Y K G++ DARRVFD M + + S++ MI GYA +G G E L+L+++M G+ PN
Sbjct: 387 LISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPN 446
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TF+A+ SAC ++E +F +MK F I P EHY ++ +LG+ G L EA++FI
Sbjct: 447 NITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDL-EDHAEELMVDLDPSKADP------------- 483
+ +P++P + W AL R H ++ L E A+ELMV + P A P
Sbjct: 507 DA-MPYKPGSVAWAALLGACRKHKNMALAERAAKELMV-MQPLAATPYVMLANMYADAGK 564
Query: 484 --------KKIPTPPPKKRTAISILDGKSR-----LVEFRNPTLYRDDEKL-KALNQMKE 529
K + +K+ S ++ K + ++ +P + +E L + + +MK+
Sbjct: 565 WEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKK 624
Query: 530 STYVPDTRYVLHDIDQEAKEQALL---YHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
YV D ++ + D+ + + + +HSE+LA+A+GL+ST + ++KNLR+CGDC
Sbjct: 625 VGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDC 684
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNAIK MS + GRE+IVRDN RFH FKDGKCSCGDYW
Sbjct: 685 HNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ KG K D ++ + ++ H +++ + + + +I+ Y KCG
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 327 S---MTDARRVFDHMADRSMDSWHLMINGYADNGL-GDEGLQLFEQMRKLGLQPNEQTFL 382
M+D+ +VF + + W+ MI+GY+ N +E ++ F QM+++G +P++ +F+
Sbjct: 290 GRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFV 349
Query: 383 AVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQ 439
V SAC + + + IH ++KS P + L+ + K G+L +A++ +
Sbjct: 350 CVTSACSNLSSPSQGKQIHGLAIKSNI---PSNRISVNNALISLYYKSGNLLDARRVFD- 405
Query: 440 KLPFEPTAEFWEALRNYARIHG 461
++P F ++ YA+ HG
Sbjct: 406 RMPELNAVSFNCMIKGYAQ-HG 426
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 31/125 (24%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD------------------ 336
K +H +++S + L+N + +Y KCG ++ AR FD
Sbjct: 26 TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYA 85
Query: 337 -----HMADRSMD--------SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
H+A + D S++ +I+GYAD + LF++MR+LG + + T
Sbjct: 86 KDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSG 145
Query: 384 VFSAC 388
+ +AC
Sbjct: 146 LIAAC 150
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYAD 355
K++H + + +NN + Y K G + +A VF M R SW+ MI Y
Sbjct: 158 KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQ 217
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD-AIEEAFIHFESMKSEFGISPGT 414
+ G + L L+++M G + + T +V +A S D I H + +K+ G +
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA--GFHQNS 275
Query: 415 EHYLGLVGVLGKCG---HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE 471
GL+ KCG + ++++ ++ L P W + I G E+H+EE
Sbjct: 276 HVGSGLIDFYSKCGGRDGMSDSEKVFQEILS--PDLVLWNTM-----ISGYSMNEEHSEE 328
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 221/394 (56%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + IEL +GV+ + F ++ + C E ++H +++++ D +++
Sbjct: 303 CIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSS 362
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+++MYGKCG ++ + ++F + + +W+ IN A +G G E ++ F++M G++P
Sbjct: 363 TLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRP 422
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N TF+++ +AC A ++E +F SMK GI P EHY ++ + G+ G L EA++F
Sbjct: 423 NHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKF 482
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS----------------- 479
I + +P +P A W +L R+ G+ +L + A + M+ L+P
Sbjct: 483 IGE-MPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQ 541
Query: 480 ----KADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKE 529
KA K + KK S +D + F +P + EKL+ L ++KE
Sbjct: 542 WEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKE 601
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPDTR++ +++ AK++ L YHSER+A+A+ LIS PA P+ + KNLR+C DCH+A
Sbjct: 602 EGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSA 661
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+K +S++ R++IVRDN RFHHF G CSCGDYW
Sbjct: 662 LKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V AD ++ G K A+ +H ++S ++ + N + +MY K M +A
Sbjct: 217 VGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAA 276
Query: 333 RVFD-HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
RV ++ S +I+GY + ++ L +F ++R+ G++PNE TF ++ C
Sbjct: 277 RVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQ 336
Query: 392 DAIEE-AFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+E+ A +H E +K+ S ++ ++ L+ + GKCG + + Q ++ A
Sbjct: 337 ALLEQGAQLHAEVIKT----SLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIA- 391
Query: 449 FWEALRNYARIHG 461
W A N HG
Sbjct: 392 -WNAAINVLAQHG 403
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+L + + + +MY K G + +A RVFD M + +W MI+GYA NG + + F M
Sbjct: 152 AELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDM 211
Query: 370 RKLGLQPNEQTFL-AVFSACGSA-DAIEEAFIHFESMKSEF 408
R+ GL +Q L +V SA G D IH MKS F
Sbjct: 212 RREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGF 252
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I MY C + A R+FD M ++ SW +++G N + + L F M + G
Sbjct: 55 LANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAG 114
Query: 374 LQPNE 378
L P +
Sbjct: 115 LVPTQ 119
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 213/385 (55%), Gaps = 32/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++++GV+ + + C + +++H+Y + + + + +++MY KCG+
Sbjct: 296 MLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGN 355
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A RVF + + +W +MI G+A +G D+ LQ F +M+ G+ P+E FLA+ +A
Sbjct: 356 IKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTA 415
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + +++ FESM+ ++ I P +HY +V +LG+ G L EA FI Q +P P
Sbjct: 416 CSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFI-QSMPINPDF 474
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTPP 490
W AL R H +I++ + E ++ L+P D +++ T
Sbjct: 475 VIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLM 534
Query: 491 P----KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
+K S ++ + ++ F R + E++ A K+ Y+P+T +
Sbjct: 535 KNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITA--SAKQEGYMPETAW 592
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLH+I++E KE AL HSE+LA+A+GLIST + +RI+KNLRVCGDCH+ +K S++
Sbjct: 593 VLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSR 652
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD KRFHHFKDG CSCGDYW
Sbjct: 653 REIILRDIKRFHHFKDGTCSCGDYW 677
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I + + G + AR +F M ++++ SW MING++ NG ++ L +F +M + G++
Sbjct: 243 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 302
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PN+ T ++ AC A++ IH + F ++ G LV + KCG++ A
Sbjct: 303 PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGT--ALVDMYAKCGNIKSAS 360
Query: 435 Q-FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ F+E K T W + IHG D A + V + + +P ++
Sbjct: 361 RVFVETKGKDLLT---WSVMIWGWAIHGCF---DQALQCFVKMKSAGINPDEV 407
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 202/355 (56%), Gaps = 27/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++ H Y L+ + D + +I+MY K GS+T + +VF+ + ++S SW+ MI GY
Sbjct: 366 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 425
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+GL E ++LFE+M++ G P++ TFL V +AC + I E + + MKS FG+ P +
Sbjct: 426 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 485
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY ++ +LG+ G L +A + + +++ E W++L + RIH ++++ + + +
Sbjct: 486 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 545
Query: 476 LDPSK-----------------ADPKKIP----TPPPKKRTAISILDGKSRLVEFRNPTL 514
L+P K D +K+ +K S ++ ++ F
Sbjct: 546 LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 605
Query: 515 YRDD-EKLKALNQMKEST-----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+ D E++K+L + E Y PDT V HD+ +E K + L HSE+LA+ YGLI T
Sbjct: 606 FLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKT 665
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T +R+ KNLR+C DCHNA K++S+++ RE++VRDNKRFHHFK+G CSCGDYW
Sbjct: 666 SEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D+ +L C K K+VH + +++ + DL + V+ +Y CG +
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +FD M D+S+ SW+ +I GY NG D L +F QM G+Q + + VF AC
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 357
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 28/249 (11%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D D + T+ +C + K VH + ++ + +LVLNN +++MY KCG +T
Sbjct: 35 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 94
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSA 387
+A+ +F ++++ SW+ M+ G++ G + QM G ++ +E T L
Sbjct: 95 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 154
Query: 388 CGSADAIEEAF------IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
C E+F +H S+K EF + + V KCG L AQ+
Sbjct: 155 C-----FHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHG-- 205
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
T W AL + HA+ L KI P T S+L
Sbjct: 206 IRSKTVNSWNAL-----------IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 254
Query: 502 GKSRLVEFR 510
S+L R
Sbjct: 255 ACSKLKSLR 263
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VKAD +C + + + K++H Y L+ + ++ N + Y KCGS++ A+
Sbjct: 141 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 200
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVF + ++++SW+ +I G+A + L QM+ GL P+ T ++ SAC
Sbjct: 201 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 260
Query: 393 AIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ FI ++ + + YL ++ + CG L Q +
Sbjct: 261 SLRLGKEVHGFIIRNWLERDLFV------YLSVLSLYIHCGELCTVQALFD 305
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 199/366 (54%), Gaps = 31/366 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C K VH + ++ + +I+MY KCGS+ +AR +FD M ++++ SW
Sbjct: 433 CAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSW 492
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
++MI+GY +G G E L+L++ M L P TFL+V AC ++E F SM S
Sbjct: 493 NVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTS 552
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
++GI+PG EH +V +LG+ G L EA + I + W AL +H D DL
Sbjct: 553 DYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612
Query: 467 DHAEELMVDLDPSKADPKKIPT---PPPKKRTAISIL--DGKSR---------LVEF--- 509
A + + +L+P + + K+ + +++ + KSR L+E
Sbjct: 613 KLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDR 672
Query: 510 ------------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
++ +Y EKL A +M E+ Y PDT L+D+++E KE + HSE
Sbjct: 673 PHVFMAGDRAHPQSDAIYLYLEKLTA--KMIEAGYRPDTEAALYDVEEEEKEHMVKVHSE 730
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LAIA+GL++T T +RIIKNLRVC DCHNA KI+S++ R ++VRD RFHHF+DG C
Sbjct: 731 KLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVC 790
Query: 618 SCGDYW 623
SCGDYW
Sbjct: 791 SCGDYW 796
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYE-NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
EL+ G++ +S L + +P +E A +H + +++ + + ++ + +Y +
Sbjct: 312 ELVGMGLRPSSSTLVALIPV-HSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRF 370
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
M ARR FD M +++M+SW+ MI+GYA NGL + + LF+QM+ L ++PN T +
Sbjct: 371 NDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSAL 430
Query: 386 SACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
SAC A+ ++H + K E + T L+ + KCG + EA+ +
Sbjct: 431 SACAQLGALSLGKWVHKIIANEKLELNVYVMT----ALIDMYVKCGSIAEARCIFDS 483
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I +Y KCG M AR +FD M + +++ +I+GY+ NG+ ++LF+++ +GL+P+
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321
Query: 378 EQTFLAVF 385
T +A+
Sbjct: 322 SSTLVALI 329
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H + S D + + + ++Y DAR+VFD + W+ ++ G +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS-- 200
Query: 357 GLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT- 414
G E L+ F +M G ++P+ T +V A A E A FG G
Sbjct: 201 --GSEALEAFVRMAGAGSVRPDSTTLASVLPA-----AAEVANTTMGRCVHAFGEKCGLA 253
Query: 415 --EHYL-GLVGVLGKCG------HLFE 432
EH + GL+ + KCG HLF+
Sbjct: 254 QHEHVVTGLISLYAKCGDMECARHLFD 280
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 208/402 (51%), Gaps = 34/402 (8%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G AIEL D G A+ ++ C E ++VH + L+
Sbjct: 252 IAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--Y 309
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL+L+N +++MY KCGS+ DA +F M R + SW MI+G A NG E L++F+
Sbjct: 310 ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDL 369
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+ G+ PN T + V AC A +E+ + +F SMK FGI P EH+ +V +LG+ G
Sbjct: 370 MKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAG 429
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA +FI + + EP A W L R+H +L +A ++ L+P
Sbjct: 430 KLDEAVEFI-RDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLS 488
Query: 479 -----------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR--DDEKLKALN 525
++ K + KK S ++ + + F L D ++ LN
Sbjct: 489 NTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELN 548
Query: 526 QM----KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
++ YVP T +VL D+ E KE L YHSE++AIA+G + P+RI+KNLR
Sbjct: 549 RLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLR 608
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH K++S+ GR +I+RD RFHHF+DG CSCGDYW
Sbjct: 609 ICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 250 VADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA LA +G+ +EA+ + GV +A F ++ CG P +H ++
Sbjct: 153 VAALAN--ADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPG---VLAALHASTVK 207
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ D+ + + +I+ Y K G + RRVFD M R + W+ +I G+A +G G ++L
Sbjct: 208 VGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIEL 267
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
F +M+ G N+ T +V AC +E +H +K E + + L+ +
Sbjct: 268 FMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLIL----HNALLDMY 323
Query: 425 GKCGHLFEAQQFIEQ 439
KCG L +A+ +
Sbjct: 324 CKCGSLEDAEALFHR 338
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 248 PSVADLARLCQEG----KVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
PS+A +RLC EG + +L G++AD L +LC + + +H +
Sbjct: 39 PSLAIFSRLCVEGPFPAALALLPDLAAAGLRADPVSLTRLVKLCVRHGTAGDGRLIHRHV 98
Query: 304 --------LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
G + ++N ++ MY K G + DA R+FD M +R++ +W ++ A+
Sbjct: 99 EAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALAN 158
Query: 356 -NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
+G +E L+ M + G+ PN TF +V ACG+ + A +H ++K
Sbjct: 159 ADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVL--AALHASTVK 207
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 208/393 (52%), Gaps = 44/393 (11%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+++ GV+ + + ++ C + ++V + I + + +I+MY KCG
Sbjct: 187 EMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCG 246
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ AR+VFD + ++ + +W MI+G A++GL +E + LF+QM GL+P+E+T AV S
Sbjct: 247 SIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLS 306
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +A E F +F SM ++GI P +HY +V +L + GHL EA++FI +K+P EP
Sbjct: 307 ACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFI-RKMPIEPD 365
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----------------------- 483
W L +++HGDI D +E+LM D K D
Sbjct: 366 VVLWRTLIWASKVHGDI---DRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKA 422
Query: 484 --------KKIPTPPPKKRTAISIL-----DGKSRLVEFRNPTLYRDDEKLKALNQMKES 530
K + PP R + L G S +E D+ + ++K
Sbjct: 423 KMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVE----ERLKAE 478
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y P VL +ID + K L +HSE+LA+A+GLI T T +RI+KNLR C DCH+ +
Sbjct: 479 GYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVL 538
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I +++IVRD RFHHF +G CSC DYW
Sbjct: 539 KLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L + C K K++H +S + D ++N +I MY CG A +VF M DR
Sbjct: 102 LLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRD 161
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ SW MI+G+ D+ E ++LFE+M + G++PNE T ++V AC A A+ +
Sbjct: 162 VVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGR-RVQ 220
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLPFEPTAEFWEALRNYARI 459
+ E I L+ + KCG + A++ I K F TA L N+
Sbjct: 221 GVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMI-SGLANHGLC 279
Query: 460 HGDIDLEDHAEEL 472
+ L D E
Sbjct: 280 EEAVTLFDQMESF 292
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 194/353 (54%), Gaps = 28/353 (7%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H +++ D V+ N +I+MY KCG + DAR FD M R SW+ MI GY+ +G
Sbjct: 460 QIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHG 519
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
+ E L LF+ M+ +PN+ TF+ V SAC +A + + HFESM ++ I P EHY
Sbjct: 520 MSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHY 579
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +LG+ G EA + I + + ++P+ W AL IH +DL + +++++
Sbjct: 580 TCMVWLLGRLGRFDEAMKLIGE-IAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEME 638
Query: 478 PSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RN 511
P K + +K +S ++ + + F +
Sbjct: 639 PHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSH 698
Query: 512 PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 570
P + L+ LN + +++ YVPD VL D+ + KE+ L HSERLA+AYGLI TP
Sbjct: 699 PDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPL 758
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+RIIKNLR+C DCH +K++S++V RE+++RD RFHHF+ G CSCGDYW
Sbjct: 759 SCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 110/221 (49%), Gaps = 9/221 (4%)
Query: 246 LPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHD 301
L P +AR Q + KEA++L + V + F ++ + C + + K++H
Sbjct: 303 LIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHS 362
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
L+ + ++ ++N ++++Y KCG + ++ ++F+ + DR+ +W+ +I GY G G+
Sbjct: 363 CVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGER 422
Query: 362 GLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGL 420
+ LF M + +QP E T+ +V A S A+E IH ++K+ + + L
Sbjct: 423 AMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN--SL 480
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ + KCG + +A+ ++ + + W A+ +HG
Sbjct: 481 IDMYAKCGRINDARLTFDKMNKRDEVS--WNAMICGYSMHG 519
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + K VH L+ DL + ++E+Y K G + DA+R+F+ M + W
Sbjct: 247 CLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPW 306
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
LMI YA + E L LF +MR+ + PN TF +V AC S+ +++ S
Sbjct: 307 SLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG-KQIHSCVL 365
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+FG++ ++ V KCG + + + E+
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEE 398
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ + +G + + F TL +L + +H + D + +I+ Y
Sbjct: 125 LRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVR 184
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ AR VFD + + M SW M+ YA+N +E LQLF QMR +G +PN T
Sbjct: 185 GNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGAL 244
Query: 386 SACGSADAIEEAFIHFESMKSEFG--ISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQ 439
+C +A F KS G + +H L L+ + K G + +AQ+ E+
Sbjct: 245 KSCLGLEA-------FNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEE 297
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 223/418 (53%), Gaps = 36/418 (8%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKW 292
++ GD ++ S+ + Q + A+EL + G A+ + ++ C
Sbjct: 218 DEMVTGDAIVWNSI--IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
E + H + ++ DL+LNN +++MY KCGS+ DA RVF+ M +R + +W MI+G
Sbjct: 276 LELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
A NG E L+LFE+M+ G +PN T + V AC A +E+ + +F SMK +GI P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
EHY ++ +LGK G L +A + + + + EP A W L R+ ++ L ++A +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNE-MECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452
Query: 473 MVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF-- 509
++ LDP A ++ KK S ++ ++ F
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512
Query: 510 ---RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
+P + +KL + ++++ YVP+T +VL D++ E E +L +HSE+LA+A+GL
Sbjct: 513 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 572
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ P +RI KNLR+CGDCH K+ S++ R +++R R+HHF+DGKCSCGDYW
Sbjct: 573 MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ + +H ++ + D+ + + +I+++ K G DA VFD M W+ +I G+A
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---EAFIHFESMKSEFGIS 411
N D L+LF++M++ G + T +V AC +E +A +H + ++
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 296
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + KCG L +A + Q
Sbjct: 297 N------ALVDMYCKCGSLEDALRVFNQ 318
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKK 298
DQ L S + RLC + + A++ MD G+ AD++ + L + C + +
Sbjct: 25 DQTLLLS--EFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNL 82
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+ + + R + L N +I MY K + DA ++FD M R++ SW MI+ Y+ +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADA 393
+ L+L M + ++PN T+ +V +C G +D
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 218/414 (52%), Gaps = 44/414 (10%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
D+ L ++ + G+ EA+ E+ +GV+ D +L E ++
Sbjct: 193 DRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRR 252
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH Y L+ +R + + N ++++Y KC ++ + +R+ SW +I G A NG
Sbjct: 253 VHVYLLKVGLRENSHVTNSLLDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGF 304
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
G+E L+LF +M GL P+E TF+ V AC ++E F +F MK EFGI P EHY
Sbjct: 305 GEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYG 364
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+V +L + G + +A ++I Q +P +P A W L IHG + L + A ++ L+P
Sbjct: 365 CMVDLLSRAGLVKQAYEYI-QNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEP 423
Query: 479 SK-----------------ADPKKIPTP----PPKKRTAISILDGKSRLVEF-------- 509
AD + I KK + S+++ +R+ EF
Sbjct: 424 KHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHP 483
Query: 510 RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
++ +Y EK+ L +K YVP T VL DI++E KEQAL YHSE+ AIA+ ++T
Sbjct: 484 QSQDVYALLEKITEL--LKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTA 541
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T +R++KNLRVC DCH AIK+M+++ RE+++RD RFHHF+ G CSC DYW
Sbjct: 542 PGTTIRVMKNLRVCADCHMAIKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H +++ + + N ++ +Y CG A VF+ M DR + + +ING+A
Sbjct: 149 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFAL 208
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
NG E L LF +M G++P+ T +++ SA A+E +H +K G+ +
Sbjct: 209 NGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK--VGLRENS 266
Query: 415 EHYLGLVGVLGKCGHLFEAQQ 435
L+ + KC ++E ++
Sbjct: 267 HVTNSLLDLYAKCDAIWEXER 287
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 204/385 (52%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ D ++ C ++VH Y + + + ++N +I++Y KCG
Sbjct: 209 EMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCG 268
Query: 327 SMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
S+ DARR+F+ M R++ SW +I G A NG G E L+LF M + L P E T + V
Sbjct: 269 SVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVL 328
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC +++ F +F+ MK ++GISP EH +V +LG+ G + EA +I +P EP
Sbjct: 329 YACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYI-ITMPLEP 387
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPT 488
A W L +H ++L A E +V+LDP AD +
Sbjct: 388 NAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRK 447
Query: 489 PPPKKRT----AISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
K R S+++ ++ + EF +P + E L + +++ Y+P T
Sbjct: 448 TMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSN 507
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL DI++E KE AL YHSERLAIA+ L+ + P+RIIKNLR+CGDCH A ++S++
Sbjct: 508 VLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYD 567
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHF+ G CSC DYW
Sbjct: 568 REIIVRDRSRFHHFQGGACSCKDYW 592
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ + N ++ +YG CG A +VFD M R++ SW+ M+N +A NG +E L +F +M
Sbjct: 151 VFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEM 210
Query: 370 RKLGLQPNEQTFLAVFSACGSADAI---EEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+ P+ T ++V +AC A+ ++ E + G+ + L+ + K
Sbjct: 211 LGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKV----GLVENSHVSNALIDLYAK 266
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEAL 453
CG + +A++ E+ + T W +L
Sbjct: 267 CGSVNDARRIFEE-MGLGRTVVSWTSL 292
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 205/395 (51%), Gaps = 30/395 (7%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ K+A+++ + V + + C K VH + D+V
Sbjct: 343 QYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVV 402
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N ++ MY +CGS+ D VF + D+S+ SW +I YA +G GL+ F ++ + G
Sbjct: 403 LENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEG 462
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L ++ T ++ SAC ++E F SM + G++P H+L +V +L + G L A
Sbjct: 463 LAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAA 522
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGD-----------IDLEDHAEELMVDL------ 476
+ I +PF P A W +L + ++H D +LE E V L
Sbjct: 523 ENLI-HDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYA 581
Query: 477 DPSKADP--KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL------NQMK 528
+ + D K +K S ++ + EF +E+L A QMK
Sbjct: 582 EAGRWDDVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMK 641
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
++ YVPD R VLH++ +E KEQ L YHSE+LAIAYGLISTP TPL I+KNLR C DCH
Sbjct: 642 DAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHA 701
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K +SRIVGR+++VRD+ RFHHF++G CSC DYW
Sbjct: 702 AAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+K DA F + C +++ + S D ++ N +I MY KCGS+
Sbjct: 157 EGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLES 216
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR+VFD + +R + +W+ MI+GYA G + L+LF++M +PN TF+ + +AC +
Sbjct: 217 ARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTN 276
Query: 391 ADAIEE 396
+ +E+
Sbjct: 277 LEDLEQ 282
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 258 QEGKVKEAIELMDKGV----KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G +A+EL + K + F L C N + E + +H + DLV
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 314 LNNKVIEMYGKCGS-MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ N ++ MY KC S + +AR+VF+ M R + +W+++I Y G + L +F+QM+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 373 GLQPNEQTFLAVFSACGSADA 393
+ PNE T V SAC A
Sbjct: 361 NVAPNEITLSNVLSACAVLGA 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS-T 307
+A + G +EA+ ++ +G++ D + F +C + K + + +H L++
Sbjct: 30 VAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRL 89
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ D++L +I MY +C + AR+ FD M +++ +W+ +I GY+ NG L++++
Sbjct: 90 LEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 368 QMRKL---GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
M G++P+ TF + AC I + E+ G + + L+ +
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACTVVGDISQGR-EIEARTVASGYASDSIVQNALINMY 208
Query: 425 GKCGHLFEAQQFIEQ 439
KCG L A++ ++
Sbjct: 209 SKCGSLESARKVFDR 223
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MYGKCGS+ DA VF + + SW L++ +A NG E L + +M GL+P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 381 FLAVFSACGSADAIEEA-FIH---FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
F+ C S+ +++ +H E+ EF I GT L+ + +C L A++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGT----ALITMYARCRDLELARKT 116
Query: 437 IEQKLPFEPTAEFWEAL 453
++ + T W AL
Sbjct: 117 FDEM--GKKTLVTWNAL 131
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 219/405 (54%), Gaps = 33/405 (8%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQ 305
A LA Q G+ +EA +L +G+K + F ++ C P E K+ H Y ++
Sbjct: 473 AMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIK 532
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ L +++ ++ +Y K G++ A +F +R + SW+ MI+GYA +G + L++
Sbjct: 533 LRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEV 592
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
FE+M+K L+ + TF+ V SAC A + + +F M ++ I+P EHY ++ +
Sbjct: 593 FEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYS 652
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------- 478
+ G L +A I +PF P A W + +R+H +I+L A E ++ L+P
Sbjct: 653 RAGMLGKAMDII-NGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYV 711
Query: 479 -------------SKADPKKIPTPP-PKKRTAISILDGKSRLVEF-----RNPTLYRDDE 519
K + +K+ KK S ++ K++ F +P
Sbjct: 712 LLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYS 771
Query: 520 KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
KL LN ++++ Y PDT YV HDI+ E KE L +HSERLAIA+GLI+T PL+I+K
Sbjct: 772 KLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVK 831
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVCGDCH+ IK++S + R ++VRD+ RFHHFK G CSCGDYW
Sbjct: 832 NLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ L G+ D+ + +C ++VH ++ + L + N +++MY K
Sbjct: 91 VSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKT 150
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ D RRVFD M DR + SW+ ++ GY+ N D+ +LF M+ G +P+ T V
Sbjct: 151 GNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVI 210
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQ 434
+A + A+ IH +K F TE + L+ +L K G L +A+
Sbjct: 211 AALANQGAVAIGMQIHALVVKLGF----ETERLVCNSLISMLSKSGMLRDAR 258
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 5/206 (2%)
Query: 261 KVKEAIELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
+V E LM +G + D T+ N ++H ++ + ++ N +I
Sbjct: 186 QVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLI 245
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
M K G + DAR VFD+M ++ SW+ MI G+ NG E + F M+ G +P
Sbjct: 246 SMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHA 305
Query: 380 TFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF +V +C S + +H +++KS G+S L+ L KC + +A
Sbjct: 306 TFASVIKSCASLKELGLVRVLHCKTLKS--GLSTNQNVLTALMVALTKCKEIDDAFSLFS 363
Query: 439 QKLPFEPTAEFWEALRNYARIHGDID 464
+ W A+ + +GD D
Sbjct: 364 LMHGVQSVVS-WTAMISGYLQNGDTD 388
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAK 297
G Q + A ++ Q G +A+ L +GVK + + T+ + +
Sbjct: 367 GVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV----QHAVFIS 422
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H +++ + +++ + K G+++DA +VF+ + + + +W M+ GYA G
Sbjct: 423 EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAG 482
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
+E ++F Q+ + G++PNE TF ++ +AC + A E F + + ++
Sbjct: 483 ETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVS 542
Query: 418 LGLVGVLGKCGHLFEAQQFIEQK 440
LV + K G++ A + +++
Sbjct: 543 SSLVTLYAKRGNIESAHEIFKRQ 565
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 216/386 (55%), Gaps = 45/386 (11%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEMYG 323
L +K V D + TLF C + A K+ D T++ L+L+ N VI MY
Sbjct: 519 LTEKDVIPDWVTYVTLFRGCADM----GANKLGDQITGHTVKVGLILDTSVMNAVITMYS 574
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG +++AR++FD ++ + + SW+ MI GY+ +G+G + +++F+ M K G +P+ +++A
Sbjct: 575 KCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVA 634
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
V S+C + ++E +F+ +K + +SPG EH+ +V +L + G+L EA+ I++ +P
Sbjct: 635 VLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDE-MPM 693
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------SKAD 482
+PTAE W AL + + HG+ +L + A + + DLD S
Sbjct: 694 KPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQV 753
Query: 483 PKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKESTYVPDTR 537
K + KK S ++ K+++ F+ +P + EKL L + +
Sbjct: 754 RKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELME-----KIAQLG 808
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YV + ++ ++HSE+LA+A+G+++ PA P+ I+KNLR+CGDCH IK++S +
Sbjct: 809 YV-----RTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVT 863
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE ++RD RFHHFK G CSCGDYW
Sbjct: 864 GREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 253 LARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G+ +EA +++ ++GV+ D++ + + C K++H ++S
Sbjct: 266 VSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLP 325
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + + ++E+Y KCG +ARRVF + DR+ SW ++I G+ G E L+LF Q
Sbjct: 326 CIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQ 385
Query: 369 MRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR + ++ + S C + D +H S+KS G + L+ + KC
Sbjct: 386 MRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKS--GHTRAVVISNSLISMYAKC 443
Query: 428 GHLFEAQQF 436
G+L A+
Sbjct: 444 GNLQNAESI 452
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 308 IRGDL-----VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
+RGD+ + +N ++ Y K GS++DA +F M R + SW+ +++GY +G +
Sbjct: 86 LRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDA 145
Query: 363 LQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLV 421
++ F MR+ G PN TF +CG A E + + ++FG + G+V
Sbjct: 146 MESFVSMRRSGDSLPNAFTFGCAMKSCG-ALGWHEVALQLLGLLTKFGFQGDPDVATGIV 204
Query: 422 GVLGKCGHL-FEAQQF--IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
+ +CG + F ++QF IE+ F + L YA+ +G DHA EL
Sbjct: 205 DMFVRCGAVDFASKQFSQIERPTVFCRNS----MLAGYAKSYG----VDHALEL 250
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G E++EL ++ + D T+ C N A+++H L+S +V
Sbjct: 372 QYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVV 431
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++N +I MY KCG++ +A +F M +R + SW M+ Y+ G + + F+ M
Sbjct: 432 ISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMS--- 488
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGL 420
N T+ A+ A A E+ + +M +E + P Y+ L
Sbjct: 489 -TRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTL 534
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 80/192 (41%), Gaps = 34/192 (17%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR-- 333
+A F + CG W+E A ++ + +GD + +++M+ +CG++ A +
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220
Query: 334 -----------------------------VFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+F+ M +R + SW++M++ + +G E L
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGV 423
+ M G++ + T+ + +AC ++ +H + ++S I P +V +
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS--AMVEL 338
Query: 424 LGKCGHLFEAQQ 435
KCG EA++
Sbjct: 339 YAKCGCFKEARR 350
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 197/366 (53%), Gaps = 32/366 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C EN +++H + L + N +I MY KCG + A VF M + SW
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSW 494
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI +G G + ++LF+QM K G+ P+ TFL V +AC A +E+ +F SM
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+GI+P +HY +V + + G +F + + +P +P A WEAL RIHG++DL
Sbjct: 555 SYGITPCEDHYARMVDLFCRAG-MFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG 613
Query: 467 DHAEELMVDLDPSK-----------ADP----------KKIPTPPPKKRTAISILDGKSR 505
A E + L P AD K + +K A S ++ +++
Sbjct: 614 IEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENK 673
Query: 506 LVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
+ F ++YR E+L +MK+ Y+PDT++VLHD++ E KE AL HSE
Sbjct: 674 VHVFMVDDDVHPEVLSVYRYLEQLGL--EMKKLGYIPDTKFVLHDMEYEQKEHALSTHSE 731
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LA+ +G++ P +R+ KN+R+CGDCHNA K MS++ RE+IVRD KRFHHFK+G C
Sbjct: 732 KLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDC 791
Query: 618 SCGDYW 623
SC DYW
Sbjct: 792 SCRDYW 797
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 53/228 (23%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD---- 311
G +EA+ L K G++ D + T+ C N ++ K++H Y L++ + +
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFC 327
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH------------------------ 347
L ++N +I +Y K + +AR++F M R++ +W+
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387
Query: 348 -------LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA--- 397
+MI+G A NG GDEGL+LF+QMR G +P + F +AC A+E
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447
Query: 398 ---FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+H + E +S G ++ + KCG + EA + + +P
Sbjct: 448 HAQLVH---LGYESSLSVGN----AMISMYAKCG-VVEAAESVFVTMP 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I Y + + AR VF+ M + +W+ MI+GY G E L L +MR LG+Q
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 376 PNEQTFLAVFSACGSADAIE 395
++ T+ + SAC + + +
Sbjct: 287 FDDITYTTIISACANVGSFQ 306
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 39/141 (27%)
Query: 284 FELCG--NPKWYENAKKVHDYFLQSTI--RGDLVLNNKVIEMYGKCGSMTDARRVF---- 335
+LC +P + A+ VH + + S RG + N+++EMY K ++ AR++F
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFL--NRLLEMYCKSSNVVYARQLFEEIP 75
Query: 336 --DHMADRSMDS---------------------------WHLMINGYADNGLGDEGLQLF 366
D +A ++ + ++ MI GYA NG G L+LF
Sbjct: 76 NPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELF 135
Query: 367 EQMRKLGLQPNEQTFLAVFSA 387
MR+ +P++ TF +V SA
Sbjct: 136 RAMRRDDFRPDDFTFTSVLSA 156
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 215/405 (53%), Gaps = 35/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A G+ +EA+ L D+ G + ++ C + K VH Y
Sbjct: 1421 AMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSR 1480
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
++ + L +++MY KCG++ A VF+ MA+R++ +W ++G A NG+G E LQLF
Sbjct: 1481 GMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLF 1540
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M G+QPN +F+AV C A ++E F+SM ++G+ P EHY +V + G+
Sbjct: 1541 KRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDPWPEHYGCMVDLYGR 1599
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L +A FI +P EP W AL N +RIH +DL +A + ++ ++ S+ D +
Sbjct: 1600 AGRLDDAISFI-NDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIE-SENDAAHV 1657
Query: 487 ----------------------PTPPPKKRTAISILDGKSRLVEF----RNPTLYRDDEK 520
KK S ++ ++ EF R Y + E
Sbjct: 1658 QLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIEL 1717
Query: 521 LKAL--NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+ A +++ Y +TR VL DI++E KE A+ HSE+LA+A+GLI P +RI+K
Sbjct: 1718 MLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVK 1777
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH IK++S++ RE+++RD RFHHFK G+CSC DYW
Sbjct: 1778 NLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 1822
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ G + AR +FD M R +W MI GY G E L LF++M
Sbjct: 1384 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 1443
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHF--ESMKSEFGISPGTEHYLGLVGVLGKC 427
G E T ++V +AC ++ ++H+ S + I GT LV + KC
Sbjct: 1444 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGT----ALVDMYSKC 1499
Query: 428 GHLFEAQQFIE 438
G + A + E
Sbjct: 1500 GAVVTAMEVFE 1510
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 209/407 (51%), Gaps = 37/407 (9%)
Query: 251 ADLARLCQEGKVKEA----IELMDKGVK-ADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A ++ L Q G +A +E+ +GV AD ++ C N E K+VH +
Sbjct: 213 ALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVIT 272
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
L ++N +++MY KC + A+ +F M + + SW +I G A +GL +E L L
Sbjct: 273 LGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTL 332
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
++ M G++PNE TF+ + AC + + F+SM +FGI P +HY L+ +
Sbjct: 333 YDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFS 392
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+ GHL EA+ I + +P +P W AL + + HG+ + + ++DL P DP
Sbjct: 393 RSGHLDEAENLI-RTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPE--DPSS 449
Query: 484 ---------------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR--DDEK 520
K + KK S +D F + DE
Sbjct: 450 YILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEI 509
Query: 521 LKAL----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
L + ++M+ YVPDT VL D+DQ+ KE+ L +HSERLA+AYGL+ T +RI
Sbjct: 510 LGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRI 569
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+KNLRVCGDCH +K++S I RE+ VRD KR+HHFKDGKCSC D+W
Sbjct: 570 VKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 265 AIELMDKGVKADASCFYTLFELCGN--PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
++ ++ +G++ D F +L + C N + K++H FL S D V+ + +++MY
Sbjct: 97 SLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMY 156
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP--NEQT 380
K R VFD + + S SW MI+GYA +G E L+LF + P N
Sbjct: 157 AKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRE------SPFKNLYA 210
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ A+ S + +A F M+ E G+S L L V+G C
Sbjct: 211 WTALISGLVQSGNANDALYLFVEMRRE-GVSIADP--LVLSSVVGACA 255
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AKK+H ++S + +I+ YGKCG + DA ++FD + + +W +++
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+ L + + + GLQP+ F ++ AC + ++ + + + F +SP E
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKL--GKQLHARFLLSPFFE 144
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 208/385 (54%), Gaps = 29/385 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E ++ + D ++ C ++VH + + + G+ + N +I++Y KCG
Sbjct: 213 ETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCG 272
Query: 327 SMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ DA +VF+ M R++ SW +I G A NG G + L+LF M + L P + T + V
Sbjct: 273 GVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVL 332
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC +++ F +F M+ ++GI+PG EH +V +LG+ G + EA +I +P EP
Sbjct: 333 YACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYI-TTMPVEP 391
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADP----K 484
A W L +H ++L + A +V+LDP AD K
Sbjct: 392 NAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRK 451
Query: 485 KIPTPPPKKRTAISILDGKSRLVEFR--NPTLYRDDEKLKALNQMKEST----YVPDTRY 538
+ T +K S+++ ++ + EF + + D+ + L ++ E YVP T
Sbjct: 452 TMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPRTSN 511
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL DI++E KE AL YHSERLAIA+ L+ + +P+RI+KNLR+CGDCH IK++S++
Sbjct: 512 VLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHLVIKLISKVYD 571
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFK G+CSC DYW
Sbjct: 572 REIIVRDRSRFHHFKGGECSCKDYW 596
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + L + C + +H ++ + + + N ++ YG CG A RVF
Sbjct: 119 DTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVF 178
Query: 336 DHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
D + +R++ SW+ ++NG+A NG +E L +F + + L P+ T ++V +AC A
Sbjct: 179 DEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGA 238
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ S+ G+ + L+ + KCG + +A + E+ + T W +L
Sbjct: 239 LTLGR-RVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEE-MGVARTVVSWTSL 296
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 205/384 (53%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +G K D + ++ C + + K +H Y ++ ++ +++L +I MY K G
Sbjct: 411 EMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLG 470
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA VF + ++ + +W+ +I G A NGL D+ L+ F +M++ G+ PNE TF+AV
Sbjct: 471 CVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLG 530
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++E HF SM E I P +HY +V +LG+ G L EA++ IE +P P
Sbjct: 531 ACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIES-MPMAPD 589
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKADPKKIPTPPPK 492
W AL + +GD + + +V+L P SK + +
Sbjct: 590 VSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGM 649
Query: 493 KRT-------AISILDGKSRLVEFR--NPTLYRDDEKLKALNQM----KESTYVPDTRYV 539
R S+++ R+ EF + T +++ L++M K Y PDTR V
Sbjct: 650 MRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREV 709
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
DID+E KE L HSE+LAIA+GLI+ TP+RI+KNLR+C DCH A K++S+ R
Sbjct: 710 SLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNR 769
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFHHFK G CSC DYW
Sbjct: 770 EIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y KCG + AR +FD M D+ SW MI+GYA E L LF++M+ G +
Sbjct: 359 NSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTK 418
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIH 400
P+E ++V SAC A+++ +IH
Sbjct: 419 PDETILVSVISACTHLAALDQGKWIH 444
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+++ V AD + LF+ C + K + D+ L+ D+ + N +I MY CG+
Sbjct: 117 MLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN 176
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
++DAR+VFD + M SW+ M+ GY G +E ++++M + + + + + +F
Sbjct: 177 LSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIAS-NSMIVLF-- 233
Query: 388 CGSADAIEEAFIHFESMK 405
G +EEA F MK
Sbjct: 234 -GKKGNVEEACKLFNEMK 250
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ L GN E AK V+D + + + +N +I ++GK G++ +A ++F+ M + +
Sbjct: 202 YVLVGN---VEEAKDVYDRMPERNV----IASNSMIVLFGKKGNVEEACKLFNEMKQKDL 254
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFE 402
SW +I+ Y N + +E L LF++M G+ +E L+V SAC I +H
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVH-- 312
Query: 403 SMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQ 439
+ G E Y+ L+ + C + AQ+ +
Sbjct: 313 ----GLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSE 349
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 8/169 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G+ D ++ C K VH ++ I + L N +I MY C
Sbjct: 279 EMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCE 338
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A+++F SW+ MI+GY G ++ LF+ M + ++ A+ S
Sbjct: 339 EVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMP----DKDNVSWSAMIS 394
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
D E + F+ M+ E G P LV V+ C HL Q
Sbjct: 395 GYAQQDRFTETLVLFQEMQIE-GTKPDETI---LVSVISACTHLAALDQ 439
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 197/366 (53%), Gaps = 32/366 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C EN +++H + L + N +I MY KCG + A VF M + SW
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSW 494
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI +G G + ++LF+QM K G+ P+ TFL V +AC A +E+ +F SM
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+GI+P +HY +V + + G +F + + +P +P A WEAL RIHG++DL
Sbjct: 555 SYGITPCEDHYARMVDLFCRAG-MFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG 613
Query: 467 DHAEELMVDLDPSK-----------ADP----------KKIPTPPPKKRTAISILDGKSR 505
A E + L P AD K + +K A S ++ +++
Sbjct: 614 IEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENK 673
Query: 506 LVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
+ F ++YR E+L +MK+ Y+PDT++VLHD++ E KE AL HSE
Sbjct: 674 VHVFMVDDDVHPEVLSVYRYLEQLGL--EMKKLGYIPDTKFVLHDMEYEQKEHALSTHSE 731
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LA+ +G++ P +R+ KN+R+CGDCHNA K MS++ RE+IVRD KRFHHFK+G C
Sbjct: 732 KLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDC 791
Query: 618 SCGDYW 623
SC DYW
Sbjct: 792 SCRDYW 797
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 53/228 (23%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD---- 311
G +EA+ L K G++ D + T+ C N ++ K+VH Y L++ + +
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFC 327
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH------------------------ 347
L ++N +I +Y K + +AR++F M R++ +W+
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387
Query: 348 -------LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA--- 397
+MI+G A NG GDEGL+LF+QMR G +P + F +AC A+E
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447
Query: 398 ---FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+H + E +S G ++ + KCG + EA + + +P
Sbjct: 448 HAQLVH---LGYESSLSVGN----AMISMYAKCG-VVEAAESVFVTMP 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I Y + + AR VF+ M + +W+ MI+GY G E L L +MR LG+Q
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 376 PNEQTFLAVFSACGSADAIE 395
++ T+ + SAC + + +
Sbjct: 287 FDDITYTTIISACANVGSFQ 306
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 39/141 (27%)
Query: 284 FELCG--NPKWYENAKKVHDYFLQSTI--RGDLVLNNKVIEMYGKCGSMTDARRVF---- 335
+LC +P + A+ VH + + S RG + N+++EMY K ++ AR++F
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFL--NRLLEMYCKSSNLVYARQLFEEIP 75
Query: 336 --DHMADRSMDS---------------------------WHLMINGYADNGLGDEGLQLF 366
D +A ++ + ++ MI GYA NG G L+LF
Sbjct: 76 NPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELF 135
Query: 367 EQMRKLGLQPNEQTFLAVFSA 387
MR+ +P++ TF +V SA
Sbjct: 136 RAMRRDDFRPDDFTFTSVLSA 156
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 214/398 (53%), Gaps = 44/398 (11%)
Query: 264 EAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+AI++ + + +DA ++ C K +H Y L+ + + N
Sbjct: 439 DAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNA 498
Query: 318 VIEMYGKCGSMTDARRVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG + R +F+ + R ++ SW+ +I+GY +G G E LQ+FE+M + G+ P
Sbjct: 499 LMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISP 558
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N TF++V AC +E+ FESM E+ ++P EHY +V +LG+ G L EA +
Sbjct: 559 NIITFVSVLGACSHVGLVEQGKKLFESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVEL 617
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD-------------- 482
I Q + +P+ + W +L RIHG ++ + A + DL+P A
Sbjct: 618 I-QSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKL 676
Query: 483 -------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-----N 525
+ + +K S ++ K +L F +NP + E+L+AL
Sbjct: 677 QNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQV----EELQALIGEFVT 732
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
QMK YVPDTR VL+DI++E KE+ LL HSE+LA+A+GLI T + +RI KNLR+C D
Sbjct: 733 QMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCED 792
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH+ K +S+ RE++VRD RFHHF++G CSC DYW
Sbjct: 793 CHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK-- 371
+ +I+ Y K G ++ A RVF M DR++ SW MI YA N + +Q+F++M
Sbjct: 392 VATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASD 451
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
L PN T ++V AC +A+ + +H ++ F + + L+ + KCG L
Sbjct: 452 ADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLN--ALMAMYMKCGCL 509
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
E ++I + W +L + +HG
Sbjct: 510 -ETGRYIFNWIGRRRNVVSWNSLISGYGMHG 539
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF-LQSTIRGDLVL 314
LC G++ +A L+ + +L + A VH R D L
Sbjct: 227 LCAHGRLAQATALLQGLPAPTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFL 286
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+ ++IE Y ++ AR+VFD +++ W+ M+ A G+E L M +LG+
Sbjct: 287 STRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGV 346
Query: 375 QPNEQTFLAVFSACGSADA 393
+ ++ AC +A A
Sbjct: 347 PVDSYSYAHGLKACIAASA 365
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 200/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N E + H L S + + ++N +I +YGKCGS+ A ++F M R SW
Sbjct: 381 CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+++GYA G +E + LFE M G+ P+ TF+ V SAC A +E+ + +FE M
Sbjct: 441 TALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
E I+P +HY ++ +L + G L EA+ FI Q +PF P A W L + R++G++++
Sbjct: 501 EHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQ-MPFSPDAIGWATLLSSCRLNGNLEIG 559
Query: 467 DHAEELMVDLDP----SKADPKKIPTPPPKKRTAISILDGKSRL----------VEFRNP 512
A E + L+P S I K + G + ++++N
Sbjct: 560 KWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNK 619
Query: 513 T-LYRDDE-----------KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
++ D+ KL++L +M E YVPD +VLHD+++ K + L +HSE+L
Sbjct: 620 VHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKL 679
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
AIA+GL+ P +R++KNLRVCGDCHNA K +SRI RE++VRD RFH FKDG CSC
Sbjct: 680 AIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSC 739
Query: 620 GDYW 623
GD+W
Sbjct: 740 GDFW 743
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 13/220 (5%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYEN 295
P D + ++ + L Q G KEA+ E+ +G D F ++ CG +
Sbjct: 231 PEKDSISWTTI--ITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDE 288
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ + ++ + + +++MY KC ++ A VF M +++ SW M+ GY
Sbjct: 289 GKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQ 348
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGT 414
NG +E +++F M++ + P++ T +V S+C + ++EE A H +++ S G+
Sbjct: 349 NGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALAS--GLICFV 406
Query: 415 EHYLGLVGVLGKCGHLFEAQQ-FIEQKLPFEPTAEFWEAL 453
L+ + GKCG L A Q F E K+ E + W AL
Sbjct: 407 TVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS---WTAL 443
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 260 GKVKEAIE-----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
G + E++ L D V + F T+ L N + + +++H + + L +
Sbjct: 116 GLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFV 175
Query: 315 NNKVIEMYGKCGSMTDARRVF-------------------------------DHMADRSM 343
+ +++MY K G + DA R+F D+M ++
Sbjct: 176 GSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS 235
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
SW +I G NGL E + F++M G ++ TF +V +ACG A++E
Sbjct: 236 ISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEG 289
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+NA+ V D+ Q +L N ++ Y K G + D +RVFD M + + SW+ +++GY
Sbjct: 57 KNARNVFDHIPQP----NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGY 112
Query: 354 ADNGLGDEGLQLFEQMRKLG-LQPNEQTF 381
A NGL E ++++ M K G + N TF
Sbjct: 113 AGNGLISESVRVYNMMLKDGSVNLNRITF 141
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 275 ADASCFYTL-FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+ +S +YT + C + KK+H +++ + L N +I YGK G + +AR
Sbjct: 2 SSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARN 61
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
VFDH+ ++ SW+ +++ Y+ G + ++F+ M
Sbjct: 62 VFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSM 97
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 210/397 (52%), Gaps = 34/397 (8%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E V+ E+ G+K + ++ C N E + H L S +R + +++
Sbjct: 362 CGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSS 421
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGKCGS+ DA R+FD M S+ +++GYA G E + LFE+M G++P
Sbjct: 422 ALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKP 481
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N TF+ V SAC + +E+ +F SM+ + GI +HY ++ + + G L EA++F
Sbjct: 482 NGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEF 541
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKAD 482
I Q +P P A W L + R+ GD+++ A E ++ DP SK +
Sbjct: 542 IRQ-MPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGE 600
Query: 483 PKKIPTP-------PPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKALN-Q 526
++ KK S + K+R+ F + T+Y EKL+ LN +
Sbjct: 601 WSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIY---EKLQWLNSK 657
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
M E Y PD VLHD+ K L HSE+LAIA+GLI P P+R++KNLRVC DC
Sbjct: 658 MAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDC 717
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNA K +S+I GR+++VRD RFH F +G CSCGD+W
Sbjct: 718 HNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 20/259 (7%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G EA+++ + GV D F ++ CG E K++H Y +++ G+
Sbjct: 256 LTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGN 315
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +++MY KC S+ A VF M +++ SW MI GY NG G+E +++F +M+
Sbjct: 316 IFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQT 375
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G++PN+ T +V S+C + ++EE F M G+ P LV + GKCG +
Sbjct: 376 DGIKPNDFTLGSVISSCANLASLEEG-AQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPP 491
+A + ++ +PF + + YA+ + D E+++ + P
Sbjct: 435 DAHRLFDE-MPFHDQVSYTALVSGYAQFGKAKETIDLFEKML------------LKGVKP 481
Query: 492 KKRTAISILDGKSR--LVE 508
T I +L SR LVE
Sbjct: 482 NGVTFIGVLSACSRSGLVE 500
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M G A A + L ++ +AK+V D + ++V+ N +I +C
Sbjct: 174 QIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFD----EMVVKNVVMYNTMITGLLRCK 229
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +AR VF+ M DR +W M+ G NGL E L +F +MR G+ ++ TF ++ +
Sbjct: 230 MVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILT 289
Query: 387 ACGSADAIEEA 397
ACG+ A EE
Sbjct: 290 ACGALAASEEG 300
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 222/404 (54%), Gaps = 33/404 (8%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G EA++L G++ D+ + C + + + K +H + L+
Sbjct: 283 ALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR 342
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +L V++MY KCGS+ AR++F+ ++ R + W+ MI +G G + L LF
Sbjct: 343 -LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALF 401
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+++ + G++P+ TF ++ SA + +EE F+ M +EFGI P +H + +V +L +
Sbjct: 402 QELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLAR 461
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G + EA + + + EPT W AL + + ++L + + +++ P +
Sbjct: 462 SGLVEEANEMLAS-MHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLAL 520
Query: 487 PT---PPPKKRTAIS-----ILDGKSR------LVEF---RNPTLYRDD------EKLKA 523
+ KK + + D S+ L+E R+ + D E LK
Sbjct: 521 VSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKM 580
Query: 524 LN----QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ +M++ YVP T +V HD+D++ KEQ L YHSERLAIA+GL++T T L IIKN
Sbjct: 581 ISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKN 640
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVCGDCH+AIK +S+IV RE++VRD KRFHHFKDG CSCGDYW
Sbjct: 641 LRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A G+ EA+ + + GV D + + C VH FL+ +
Sbjct: 184 VAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGM 243
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R D+V+ +++MY K G AR+VF M R+ SW+ +I+G+A NG DE L LF +
Sbjct: 244 RMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFRE 303
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGK 426
M GLQP+ ++ AC ++ IH F + EF GT ++ + K
Sbjct: 304 MSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCILGT----AVLDMYSK 359
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
CG L A++ KL W A+ HG
Sbjct: 360 CGSLESARKLF-NKLSSRDLV-LWNAMIACCGTHG 392
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 9/246 (3%)
Query: 209 YPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL 268
+P +Y +V + L P++ + PA + +L A +R G
Sbjct: 47 FPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALL----AARSRAGSPGAALRVFRA 102
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSM 328
+ + D++ F C + A+ V + D+ + + ++ +Y +CG+M
Sbjct: 103 LPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAM 162
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
DA RVFD M + +W M+ G+ G E L ++ +MR+ G+ +E + V AC
Sbjct: 163 GDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQAC 222
Query: 389 G-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ + A +H ++ G+ LV + K GH F+ + + + +P+ A
Sbjct: 223 TLTGNTRMGASVHGRFLRH--GMRMDVVIATSLVDMYAKNGH-FDVARQVFRMMPYR-NA 278
Query: 448 EFWEAL 453
W AL
Sbjct: 279 VSWNAL 284
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 190/332 (57%), Gaps = 32/332 (9%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG + AR VFD M R+ SW M++GY +G G E L +F++M+K G P++ +
Sbjct: 1 MYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDIS 60
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
FL + AC + +++ +F+ M+ ++ + EHY ++ +L +CG L +A + I Q+
Sbjct: 61 FLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTI-QE 119
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPKK---- 485
+P EP+A W AL + R+H +++L ++A +V++ A+ ++
Sbjct: 120 MPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDV 179
Query: 486 ------IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKEST 531
+ KKR S + GK F +P +Y E+L + ++K
Sbjct: 180 ARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL--IGRIKVMG 237
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVP+T + LHD+D E K L HSE+LA+AYGL++T P+RI KNLRVCGDCH+A
Sbjct: 238 YVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFT 297
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S+IV E+IVRD+ RFHHFK+G CSCG YW
Sbjct: 298 YISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 329
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 226/402 (56%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q GK EA+EL + GVK + ++ CGN + + H + ++ +
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +I+MY KCG + ++ VF+ M +++ W+ ++NGY+ +G E + +FE
Sbjct: 420 LDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFES 479
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + L+P+ +F ++ SACG +E + +F M E+GI P EHY +V +LG+ G
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA I++ +PFEP + W AL N R+ ++DL + A + + L+P
Sbjct: 540 KLQEAYDLIKE-IPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMS 598
Query: 479 ---------SKADP--KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
++ D K+ + KK S + K+++ +P + + EK+
Sbjct: 599 NIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMD 658
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
++ +M++S + P+ + L D++++ +EQ L HSE+LA+ +GL++TP TPL++IKNLR
Sbjct: 659 EISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLR 718
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH IK +S GRE+ +RD RFHHFKDG CSCGD+W
Sbjct: 719 ICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ G+ D LF++C ++ K++H S + D + + MY +CG
Sbjct: 107 MFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGR 166
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M DAR+VFD M+++ + + ++ GYA G +E +++ +M K G++PN ++ + S
Sbjct: 167 MGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSG 226
Query: 388 CGSADAIEEAFIHFESM 404
+ +EA I F+ M
Sbjct: 227 FNRSGYHKEAVIMFQKM 243
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 56/250 (22%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G KEA+ + K G D ++ G+ + +++H Y ++ + D
Sbjct: 229 RSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKC 288
Query: 314 LNNKVIEMYGKCGSMTDARRVFDH--------------------MADRSMD--------- 344
+ + +++MYGK G + ++FD + D++++
Sbjct: 289 VISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQK 348
Query: 345 ------SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
SW +I G A NG E L+LF +M+ G++PN T ++ ACG+ A+
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHG- 407
Query: 399 IHFESMKSEFGISPGTEHYL-------GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+S G + H L L+ + KCG + + Q + +P + W
Sbjct: 408 ------RSTHGFAVRV-HLLDDVHVGSALIDMYAKCGRI-KMSQIVFNMMPTKNLV-CWN 458
Query: 452 ALRNYARIHG 461
+L N +HG
Sbjct: 459 SLMNGYSMHG 468
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 228/405 (56%), Gaps = 34/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ ++G+ +EA+ L K G A + L E K +H + ++S
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + N ++ MY K G++ DA++VFD + + S + M+ GYA +GLG E ++LF
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF 385
Query: 367 EQMRK-LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
E+M + ++PN+ TFL+V +AC A ++E +FE MK ++G+ P HY +V + G
Sbjct: 386 EEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK-KYGLEPKLSHYTTVVDLFG 444
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------- 478
+ G L +A+ FIE+ +P EP A W AL +++H + ++ +A + +++LDP
Sbjct: 445 RAGLLDQAKSFIEE-MPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHT 503
Query: 479 --------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDE 519
K++ KK A S ++ ++ + F +P + E
Sbjct: 504 LLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYE 563
Query: 520 KLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+ LNQ +KE YVPDT +V +DQ+ KE L YHSE+LA+A+ L++T + +RI+K
Sbjct: 564 MWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMK 623
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
N+RVCGDCH+AIK +S +V RE+IVRD RFHHF+DG CSC DYW
Sbjct: 624 NIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 265 AIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
++L++ G ++ D + + L + C + K VH + + S R DLV+ N ++ MY
Sbjct: 78 VLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYA 137
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE---GLQLFEQMRKLGLQPNEQT 380
KCGS+ AR+VFD M + + +W MI GY+ +G L LF +M + GL+PNE
Sbjct: 138 KCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFA 197
Query: 381 FLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++ CG ++ IH K +G LV + +CG L E++ ++
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWK--YGFQENVFVGSSLVDMYARCGELRESRLVFDE 255
Query: 440 KLPFEPTAEF-WEAL-RNYAR 458
E E W AL +AR
Sbjct: 256 ---LESKNEVSWNALISGFAR 273
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E++ G++ + +L + CG + K++H + + ++ + + +++MY +C
Sbjct: 184 LEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + ++R VFD + ++ SW+ +I+G+A G G+E L LF +M++ G E T+ A+
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
+ + ++E+ ++H MKS Y+G L+ + K G++ +A++ ++ +
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKS----GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVK 359
Query: 443 FEPTA 447
+ +
Sbjct: 360 VDVVS 364
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 197/377 (52%), Gaps = 32/377 (8%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F + C +H Y ++ + ++ +++MY KCGS+ +RRVF
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVF 422
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
D M D+S+ SW M+ GY +G G E + + + M+ + P+ F ++ SAC A +
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVV 482
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
E F M+ E+ + P HY +V +LG+ GHL EA I + + +PT++ W AL
Sbjct: 483 EGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVII-RTMEIKPTSDIWAALLT 541
Query: 456 YARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPT----PPPKKR 494
+R+H +I L + + + + D++P D +++ KK
Sbjct: 542 ASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKS 601
Query: 495 TAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQE 546
S ++ + + F + +Y +LK Q+KE+ Y PDT V +D+++E
Sbjct: 602 PGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELK--QQLKEAGYKPDTSLVFYDVEEE 659
Query: 547 AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
KE+ L HSERLAIA+ LI+T T +RI KNLRVCGDCH K++S + GRE+I+RD
Sbjct: 660 VKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDI 719
Query: 607 KRFHHFKDGKCSCGDYW 623
RFHHF G CSCGDYW
Sbjct: 720 HRFHHFIKGFCSCGDYW 736
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 13/237 (5%)
Query: 250 VADLARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ A+ G +LM K G+ AD + L C + K + K +H Y ++++I
Sbjct: 234 ISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSI 293
Query: 309 RG-DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ N +IEMY C M DARR+F+ + + SW+ MI GYA NG E L+LF
Sbjct: 294 GNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFR 353
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M G P++ TF+AV AC A+ IH +K G T LV + K
Sbjct: 354 RMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK--GFDANTIVGTALVDMYSK 411
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
CG L +++ ++ +P + + W A+ +HG E + LD KA+
Sbjct: 412 CGSLACSRRVFDE-MP-DKSLVSWSAMVAGYGLHG------RGREAISILDGMKANS 460
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G +AD + + + CG+ E ++VH + + D+ + N ++ MY K G
Sbjct: 151 EMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFG 210
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M AR VFD MA+R + SW+ MI+GYA N +F+ M K GL + T L + S
Sbjct: 211 DMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLS 270
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC A++E IH ++++ G + L+ + C + +A++ E ++ ++
Sbjct: 271 ACADLKAVKEGKVIHGYAVRNSIG-NYNKFFTNSLIEMYCNCNCMVDARRLFE-RVRWKD 328
Query: 446 TAEFWEALRNYARIHGD 462
T + + YAR +GD
Sbjct: 329 TVSWNSMILGYAR-NGD 344
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 289 NPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH 347
N K ++ +++H + + S + + LN K+ Y CG M+ A +FD + ++ W+
Sbjct: 71 NTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWN 130
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
MI GYA NGL + L L+ +M G + + T+ V ACG +E
Sbjct: 131 FMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVE 178
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 210/399 (52%), Gaps = 35/399 (8%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + A+ L ++ VK + + C K +H + + ++
Sbjct: 391 QNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVY 450
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +I+MY KCGS+++ARR+F+ M ++++ SW+ MI GY +G G E L+L++ M
Sbjct: 451 VMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAH 510
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L P TFL+V AC +EE + F SM ++ I+PG EH +V +LG+ G L EA
Sbjct: 511 LLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEA 570
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PP 490
+ I + W AL +H D DL A + + +LDP + + +
Sbjct: 571 FELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTS 630
Query: 491 PKKRTAISIL--DGKSR---------LVEFRNP---------------TLYRDDEKLKAL 524
K+ + +++ + KSR L+E N +Y EKL A
Sbjct: 631 KKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTA- 689
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+M E+ Y P+T L+D+++E KE + HSE+LAIA+GL+ST T +RIIKNLRVC
Sbjct: 690 -KMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCL 748
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K +S++ R ++VRD RFHHF+DG CSCGDYW
Sbjct: 749 DCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ +H + L+S + ++ + ++ + M AR+ FD M +++M+SW+ MI+GYA
Sbjct: 332 AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
NGL + + LFEQM KL ++PN T + SAC A+ ++H + +E + P
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLH--RIITEEDLEPNV 449
Query: 415 EHYLGLVGVLGKCGHLFEAQQFI 437
L+ + KCG + EA++
Sbjct: 450 YVMTALIDMYAKCGSISEARRIF 472
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 225 IPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM-DKGVKADASCFYTL 283
+ +++++ + P+ D VL ++ LA L V+ ++ D V+ DA+ ++
Sbjct: 161 VLSRVDHARKVFDTVPSPDTVLWNTL--LAGLSGSEAVESFARMVCDGSVRPDATTLASV 218
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ VH + + + + +I +Y KCG + AR +FD M +
Sbjct: 219 LPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDL 278
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+++ +I+GY+ NG+ + LF ++ LGL PN T +A+
Sbjct: 279 VAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI 320
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 202/355 (56%), Gaps = 27/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++ H Y L+ + D + +I+MY K GS+T + +VF+ + ++S SW+ MI GY
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+GL E ++LFE+M++ G P++ TFL V +AC + I E + + MKS FG+ P +
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 735
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY ++ +LG+ G L +A + + +++ E W++L + RIH ++++ + + +
Sbjct: 736 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795
Query: 476 LDPSK-----------------ADPKKIP----TPPPKKRTAISILDGKSRLVEFRNPTL 514
L+P K D +K+ +K S ++ ++ F
Sbjct: 796 LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Query: 515 YRDD-EKLKALNQMKEST-----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+ D E++K+L + E Y PDT V HD+ +E K + L HSE+LA+ YGLI T
Sbjct: 856 FLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKT 915
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T +R+ KNLR+C DCHNA K++S+++ RE++VRDNKRFHHFK+G CSCGDYW
Sbjct: 916 SEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D+ +L C K K+VH + +++ + DL + V+ +Y CG +
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +FD M D+S+ SW+ +I GY NG D L +F QM G+Q + + VF AC
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 28/249 (11%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D D + T+ +C + K VH + ++ + +LVLNN +++MY KCG +T
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSA 387
+A+ +F ++++ SW+ M+ G++ G + QM G ++ +E T L
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Query: 388 CGSADAIEEAF------IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
C E+F +H S+K EF + + V KCG L AQ+
Sbjct: 405 C-----FHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHG-- 455
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
T W AL + HA+ L KI P T S+L
Sbjct: 456 IRSKTVNSWNAL-----------IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 502 GKSRLVEFR 510
S+L R
Sbjct: 505 ACSKLKSLR 513
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L + G K E +K+H ST +R D VL ++I MY CGS D+R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 342 SMDSWHLMINGYADNGLGDEGLQLF-EQMRKLGLQPNEQTFLAVFSAC-GSADA 393
++ W+ +I+ Y+ N L DE L+ F E + L P+ T+ V AC G +D
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VKAD +C + + + K++H Y L+ + ++ N + Y KCGS++ A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVF + ++++SW+ +I G+A + L QM+ GL P+ T ++ SAC
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 393 AIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ FI ++ + + YL ++ + CG L Q +
Sbjct: 511 SLRLGKEVHGFIIRNWLERDLFV------YLSVLSLYIHCGELCTVQALFD 555
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH +++ + D+ + N ++ YG G +TDA ++FD M +R++ SW+ MI ++DNG
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 359 GDEGLQLFEQMRKL----GLQPNEQTFLAVFSACG 389
+E L +M + P+ T + V C
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 211/397 (53%), Gaps = 36/397 (9%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK+ EA+E + + G+ D + T+ E+ + +H ++ + +
Sbjct: 40 GKLGEALECFKRMRESGLVPDEATLVTMLSASAQLCLLEHGQSIHSIIDSLSLPMTISIG 99
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + +R +F++M R + +W++MI G A +GLG + L LFE+ GL
Sbjct: 100 TALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMICGLASHGLGKDALTLFERFLNEGLH 159
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P TF+ V +AC A ++E +F+ M +GI P EHY +V +LG+ G +FEA +
Sbjct: 160 PMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAIK 219
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-----------KADPK 484
IE + P W + RIHG +L + +++LDP+ A+ +
Sbjct: 220 VIES-MAISPDPVLWAMVLCACRIHGLAELGEKIGNRLIELDPTYDGHYVQLASIYANSR 278
Query: 485 K----------IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE----- 529
K + K S+++ + ++ F +R+ E+ + +M E
Sbjct: 279 KWEDVVRVRRLMAERNTSKVAGWSLIEARGKVHRFVAG--HREHEQSLEIQKMLEIIETR 336
Query: 530 ---STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+ YVP+ VLHDI +E KE A+ HSERLAIA+GL+ T + +RI+KNLRVC DC
Sbjct: 337 LAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAFGLLVTGPGSCIRIVKNLRVCWDC 396
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H K++SR+ RE+IVRD RFHHFK+GKCSC DYW
Sbjct: 397 HEVTKMISRVFEREIIVRDGSRFHHFKEGKCSCLDYW 433
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
+ + G ++ +++FD M +R + SW+ M+ Y NG E L+ F++MR+ GL P+E T
Sbjct: 5 FARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATL 64
Query: 382 LAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ + SA +E IH +S+ IS GT L+ + KCG + +++ E
Sbjct: 65 VTMLSASAQLCLLEHGQSIHSIIDSLSLPMTISIGT----ALLDMYAKCGCIEQSRLLFE 120
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 214/387 (55%), Gaps = 42/387 (10%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K +A T+ C K++H Y +++ + D+ + + +++MY KCG + +RR
Sbjct: 515 KPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 574
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-----RKLGLQPNEQTFLAVFSAC 388
VF+ M ++++ +W+++I +G G+E L+LF+ M R +PNE TF+ VF+AC
Sbjct: 575 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634
Query: 389 GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ I E F MK + G+ P ++HY +V +LG+ G L EA + + +P AE
Sbjct: 635 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELV-NTMP----AE 689
Query: 449 F-----WEALRNYARIHGDIDLEDHAEELMVDLDPSKAD--------------------- 482
F W +L RIH +++L + A + ++ L+P+ A
Sbjct: 690 FDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEV 749
Query: 483 PKKIPTPPPKKRTAISILDGKSRLVEFRNPTL-YRDDEKLKAL-----NQMKESTYVPDT 536
K + KK S ++ + + +F + + E+L +M++ YVPDT
Sbjct: 750 RKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDT 809
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VLH++D++ KE L HSE+LAIA+G+++TP T +R+ KNLRVC DCH A K +S+I
Sbjct: 810 SCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKI 869
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ RE+IVRD +RFHHFK+G CSCGDYW
Sbjct: 870 MEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ Q + EA+ ++ +GV+ D ++ C + + + K++H Y L++
Sbjct: 269 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN- 327
Query: 309 RGDLVLNNKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
DL+ N+ V ++MY C + RRVFDH+ R ++ W+ MI+GYA NGL ++ L
Sbjct: 328 --DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 385
Query: 365 LFEQMRKL-GLQPNEQTFLAVFSACGSADAIE-EAFIHFESMKSEF 408
LF +M K+ GL PN T +V AC +A + IH ++K F
Sbjct: 386 LFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGF 431
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 266 IELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
IE++ G+ + + ++ C + + + N + +H Y ++ + D + N +++MY +
Sbjct: 388 IEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSR 447
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG----------- 373
G M + +FD M R SW+ MI GY +G L L +M+++
Sbjct: 448 MGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDND 507
Query: 374 ------LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGVL 424
+PN T + V C + AI + IH ++++ I+ G+ LV +
Sbjct: 508 DEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGS----ALVDMY 563
Query: 425 GKCGHL 430
KCG L
Sbjct: 564 AKCGCL 569
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 296 AKKVHDYFLQSTIRGD--LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
K++H Y L+ GD NN ++ MY K G + D++ +F+ DR M SW+ MI+ +
Sbjct: 216 GKQLHGYSLRV---GDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSF 272
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ + E L F M G++ + T +V AC
Sbjct: 273 SQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 307
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-RGDLVLNNKVIEMYGK 324
IE+ G + D F + + + + +++H ++ + + N ++ MYGK
Sbjct: 81 IEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGK 140
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CG + D +VFD + DR SW+ I ++ L+ F M+ ++ + T ++V
Sbjct: 141 CGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSV 200
Query: 385 FSAC 388
AC
Sbjct: 201 ALAC 204
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 219/397 (55%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+E+ K GVK + F + N + K++H +++ +
Sbjct: 524 QSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETE 583
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I +YGKCGS+ DA+ F M++R+ SW+ +I + +G G E L LF+QM++ G
Sbjct: 584 VANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEG 643
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+PN+ TF+ V +AC +EE +F+SM SE GI P +HY +V +LG+ G L A
Sbjct: 644 LKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRA 703
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
++F+E+ +P A W L + R+H +I++ + A + +++L+P +
Sbjct: 704 RKFVEE-MPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAV 762
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQ 526
K + +K S ++ K+ + F +P ++ + L L ++
Sbjct: 763 TGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDR 822
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+ + Y+ ++ H+ ++E K+ HSE+LA+A+GL+S P PLR+IKNLRVC DC
Sbjct: 823 LAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDC 882
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H +K S ++GRE+++RD RFHHF +G CSCGD+W
Sbjct: 883 HTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+E G+ D + C K +++H S D+ + N +
Sbjct: 428 KEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNAL 487
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ +Y +CG +A +F+ + + +W+ M++G+A +GL +E L++F +M + G++ N
Sbjct: 488 VNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNV 547
Query: 379 QTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ-QF 436
TF++ SA + AD + IH +K+ G + TE L+ + GKCG + +A+ QF
Sbjct: 548 FTFVSSISASANLADIKQGKQIHATVIKT--GCTSETEVANALISLYGKCGSIEDAKMQF 605
Query: 437 IEQ 439
E
Sbjct: 606 FEM 608
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
D +C L E G+ K + +H + + D + N +I++Y K G + ARRV
Sbjct: 42 VDFAC--ALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRV 99
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F+ ++ R SW M++GYA NGLG+E + L+ QM G+ P +V SAC A
Sbjct: 100 FEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALF 159
Query: 395 EEA-FIHFESMK 405
E+ +H + K
Sbjct: 160 EQGRLVHAQVYK 171
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++R Q G + A+E+ ++ G D +L C + K++H Y L++ +
Sbjct: 216 ISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGM 275
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D ++ ++++Y KCG + +A +F ++ W+LM+ Y + LF Q
Sbjct: 276 SPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQ 335
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLG 425
M G++PNE T+ + C A I IH S+K+ F ++ Y+ L+ +
Sbjct: 336 MVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF----ESDMYVSGVLIDMYS 391
Query: 426 KCGHLFEAQQFIE 438
K G L +A++ +E
Sbjct: 392 KYGWLDKARRILE 404
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GV+ + + L C +++H +++ D+ ++ +I+MY K G
Sbjct: 335 QMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYG 394
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ ARR+ + + + + SW MI GY + E L+ F+ M+ G+ P+ + S
Sbjct: 395 WLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAIS 454
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC A+ + IH S G S + LV + +CG EA E
Sbjct: 455 ACAGIKAMRQGQQIHSRVYVS--GYSADVSIWNALVNLYARCGRSKEAFSLFE 505
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 250 VADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA L+ + G +EA+ L + GV ++ C +E + VH +
Sbjct: 112 VAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYK 171
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ V+ N +I +Y + GS++ A RVF M +++ +I+ +A G G+ L++
Sbjct: 172 QGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEI 231
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
FE+MR G P+ T ++ +AC S + + +H +K+ G+SP L+ +
Sbjct: 232 FEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKA--GMSPDYIIEGSLLDLY 289
Query: 425 GKCGHLFEAQQFIE 438
KCG + EA + +
Sbjct: 290 VKCGVIVEALEIFK 303
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 206/403 (51%), Gaps = 43/403 (10%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ ++ +GV+ D + + C E K VH Y + IR +
Sbjct: 202 QAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVF 261
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++MY KCG + VF+ M D+++ +W MI G A +G G + L LF QM G
Sbjct: 262 LGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG 321
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P++ F+ AC +++ F SM + +GI P EHY +V +L + G L EA
Sbjct: 322 VKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEA 381
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ +E K+P +P A W AL R H +++L ++ + ++L+P K+
Sbjct: 382 RDMVE-KMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSA 440
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTL-------YRDDEK 520
K + P I + + + + +P + Y D +
Sbjct: 441 SGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSR 500
Query: 521 LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
++ E YVPD + VL DI++E E AL HSE+LAIA+ LIST P+RI+KNL
Sbjct: 501 IRL-----EEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNL 555
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH+ K++S++ GRE+IVRD RFH FKDG CSC DYW
Sbjct: 556 RVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
L+++ D N +I + + G + DAR +FD M +R+ SW M+NGY G G E
Sbjct: 150 LLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREA 209
Query: 363 LQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLG 419
L +F QM+ G++P++ + V +AC A+E+ ++H ++ + GT
Sbjct: 210 LGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGT----A 265
Query: 420 LVGVLGKCGHLFEAQQFIE 438
LV + KCG + + E
Sbjct: 266 LVDMYAKCGEVQLGMEVFE 284
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 212/399 (53%), Gaps = 39/399 (9%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G KEA+ L +GVK D F T + G + K H +S + D+
Sbjct: 716 QAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVS 775
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++++Y KCG + +A +F ++ + +I A +G +E +++F +M++ G
Sbjct: 776 VATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEG 835
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ T +++ SACG A +EE F +MK FGISP EHY V +LG+ G L A
Sbjct: 836 VRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHA 895
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+Q I +K+PFE W +L ++ GD +L + + +++LDP
Sbjct: 896 EQII-RKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCA 954
Query: 479 ------SKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
+ D KK+ K +S L+ ++ EF + +Y +KL+ L
Sbjct: 955 TGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELL 1014
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
M+ + Y D D + E KE+AL YHSER+AIA+GLI+TP T L+I+KNLRVCG
Sbjct: 1015 --MRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCG 1069
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A K +S I+GRE+IVRD+ RFHHF +G CSC D W
Sbjct: 1070 DCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV D T + C + K +H + + D+ + N ++ MY CG +
Sbjct: 632 EGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWRE 691
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A F+ M R + SW++M YA GL E + LF M+ G++P++ TF + G
Sbjct: 692 ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGG 751
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ + + + F + +E G+ GLV + KCG L EA
Sbjct: 752 SALVSDGKL-FHGLAAESGLDSDVSVATGLVKLYAKCGKLDEA 793
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV---LNNKVIEMYGK 324
++ G+ + F + C N + + +K+H L T R D V + ++ MYGK
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL--TRRRDYVESSVATMLVSMYGK 485
Query: 325 CGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
CGS+ +A VF M RS+ +W++M+ YA N E +M + G+ P+ +F
Sbjct: 486 CGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFT 545
Query: 383 AVFSAC 388
+V S+C
Sbjct: 546 SVLSSC 551
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMIN 351
+ A+K H +S D+V+ N +I MY KCG + A VF + + + SW+ M+
Sbjct: 351 FGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLG 410
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGI 410
D + + F M G+ PN+ +F+A+ +AC +++A++ IH +
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQ-QFIEQKLPFEPTAEFWEALRNYAR 458
+ + LV + GKCG + EA+ F E LP + L YA+
Sbjct: 471 VESSVATM-LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQ 518
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
AD + L + C + K+ H+ + + L L N +I MY +CGS+ +A +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACG-SAD 392
F M +R++ SW +I+ A +G LF M + PN T +A+ +AC S D
Sbjct: 83 FSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142
Query: 393 AIEEAFIHFESMKSEFGI--SPGTEHYLG--LVGVLGKCG 428
IH +M E G+ T +G ++ + KCG
Sbjct: 143 LAIGRSIH--AMIWELGLERESTTATLVGNAMINMYAKCG 180
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T C + + + +H ++ + D + N +I MYGKCG A VF MA
Sbjct: 236 FITALGACTSLR---DGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMA 292
Query: 340 DR---SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
R + SW+ MI+ + G + + +F ++R G++PN T + + +A ++
Sbjct: 293 SRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
A F E G ++ + KCG F A + +++ ++ W +
Sbjct: 353 AARKFHGRIWESGYLRDVVVGNAIISMYAKCG-FFSAAWTVFRRIRWKCDVISWNTM 408
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 9/185 (4%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + KEA +E++ GV DA F ++ C + A+ + L+S R
Sbjct: 518 QNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGYRSA-C 573
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I M+G+C + AR VFD M + SW M++ A+N E LF +M+ G
Sbjct: 574 LETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEG 633
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P++ T C + + I + +E G+ L+ + CG EA
Sbjct: 634 VIPDKFTLATTLDTCLDSTTLGLGKI-IHACVTEIGLEADIAVENALLNMYSNCGDWREA 692
Query: 434 QQFIE 438
F E
Sbjct: 693 LSFFE 697
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 281 YTLFEL---CGNPKWYENAKKVHDYFLQSTIRGD----LVLNNKVIEMYGKCGSMTDARR 333
YTL + C N + + +H + + + ++ N +I MY KCGS DA
Sbjct: 128 YTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIA 187
Query: 334 VFDHMADRSMDSWHLMINGYA-DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF + ++ + SW M YA + + L++F +M L PN TF+ AC S
Sbjct: 188 VFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR 247
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ ++H ++ G P + L+ + GKCG
Sbjct: 248 --DGTWLHSLLHEAGLGFDPLAGN--ALINMYGKCG 279
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 32/382 (8%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K ++ T+ C + K++H Y +++ + + + + +++MY KCG + ARR
Sbjct: 433 KPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARR 492
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-----LQPNEQTFLAVFSAC 388
VFD M R++ +W+++I Y +G G E L+LFE M G ++P E TF+A+F++C
Sbjct: 493 VFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASC 552
Query: 389 GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ ++E F MK+E GI P +HY +V ++G+ G + EA +
Sbjct: 553 SHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVG 612
Query: 449 FWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIP 487
W +L RI+ +I++ + A E ++ L P A +++
Sbjct: 613 AWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMK 672
Query: 488 TPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLH 541
KK S ++ + +F +P + + L+ L++ +K+ YVPDT VLH
Sbjct: 673 AMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLH 732
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
DID+E KE L HSE+LAIA+G+++TP T +R+ KNLRVC DCH A K +S+I RE+
Sbjct: 733 DIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREI 792
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
I+RD +RFHHFKDG CSCGDYW
Sbjct: 793 ILRDARRFHHFKDGTCSCGDYW 814
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H Y ++ + + L N +I+MY + G + ++R+FD M DR + SW+ +I Y G
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGR 400
Query: 359 GDEGLQLFEQMRKLG----------------LQPNEQTFLAVFSACGSADAIEEAF-IHF 401
+ L L +M+++ +PN T + V C S A+ + IH
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460
Query: 402 ESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
++++ ++ G+ LV + KCG L A++ +Q +P W + +
Sbjct: 461 YAIRNLLASQVTVGS----ALVDMYAKCGCLNLARRVFDQ-MPIRNVIT-WNVIIMAYGM 514
Query: 460 HG 461
HG
Sbjct: 515 HG 516
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS--TIRGDLVLNNKVIEMYGKCGSM 328
+GVK D F ++ C + K++H Y L++ I V + +++MY CG +
Sbjct: 210 EGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFV-GSALVDMYCNCGQV 268
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSA 387
R VFD + DR + W+ MI GYA + ++ L LF +M GL N T ++ A
Sbjct: 269 ESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPA 328
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ ++N ++ MYGKCG + DA +VFD + +R SW+ +I+ + ++ F M
Sbjct: 47 VTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLM 106
Query: 372 LGLQPNEQTFLAVFSAC 388
G +P+ T +++ AC
Sbjct: 107 EGFEPSSFTLVSMALAC 123
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
NN ++ MY K G + DA+ + DR + +W+ MI+ ++ N E L M G+
Sbjct: 153 NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGV 212
Query: 375 QPNEQTFLAVFSACGSADAI 394
+P+ TF +V AC D +
Sbjct: 213 KPDGVTFASVLPACSHLDLL 232
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 203/388 (52%), Gaps = 34/388 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GV D C E + VH ++ + L + N ++ MY K G
Sbjct: 130 DMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTG 189
Query: 327 SMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
S+ +A++VFD D +W +I GYA NG G E L+++ M + G +P+ TF+ +
Sbjct: 190 SLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGL 249
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC A ++ HF SM++E GI+PG +HY +V +LG+ G L EA + +
Sbjct: 250 LFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTT-R 308
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------PPPKKR 494
A W+AL R H + +L +HA ++ LDP+ A P + + + R
Sbjct: 309 LDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWGDVARVR 368
Query: 495 TAISI-------------LDGKSRLVEF------RNPTLYRDDEKLKALNQMKESTYVPD 535
T++ +G + L R +YR E++ +++ YV D
Sbjct: 369 TSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMT--ERIRGQGYVAD 426
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T + L D E +E+ L +HSERLA+A+GL++ PA P+R+ KNLRVCGDCH AIK++++
Sbjct: 427 TAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCHAAIKMVAQ 486
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE+++RD+ FHH KDG CSCGDYW
Sbjct: 487 AYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 244 QVLPPSVA---DLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYEN- 295
V+PP VA ++R + G + A+ L+ +G +AD YTL +
Sbjct: 1 MVVPPGVAYNAAISRCSRAGLHQRALALLHEMRARGHRADE---YTLPPALNSAALLRLP 57
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A +H L++ + L + N +++ Y K AR VFD M R + SW ++ G A
Sbjct: 58 ADALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLAR 117
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
+ D LQ++ M G+ P+E A S+C A A+E +H +++ + P
Sbjct: 118 SRSHDSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVR--LALDPFL 175
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
LV + K G L EA++ + W AL
Sbjct: 176 SVGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTAL 214
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 203/379 (53%), Gaps = 28/379 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+K D + + C + + K +H Y + I D +L +I+MY KCG + +A
Sbjct: 197 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEA 256
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
VF M ++ + W MI+GYA +G G E L+ F +M+ G++PN+ TF + +AC A
Sbjct: 257 IEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHA 316
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ EA + FESM+ G P EHY +V +LG+ G L EA++ IE +P +P A W
Sbjct: 317 GLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIEN-MPVKPNAAIWG 375
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPP 490
AL N IHG+++L ++++ +DP +++
Sbjct: 376 ALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQG 435
Query: 491 PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVLHDID 544
K S++ EF +P + D L+ + +++E Y P +L D++
Sbjct: 436 VSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLE 495
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+ KE A+ +HSE+LA+ +GLIST +RI+KNLRVC DCH IK++S++ RE+++R
Sbjct: 496 DKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMR 555
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D RFH FKDG C+CGDYW
Sbjct: 556 DRTRFHLFKDGNCTCGDYW 574
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK--CGSMTDARRVFDHMAD 340
L + C N E +++H L++ + D + +K++ GS+ AR VFD +
Sbjct: 24 LLQRCSN---MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FI 399
+ W+ MI GY+++ +E L L+ M + N TF + AC S A+EE I
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
H +K FG T + L+ V K G + A+ +Q
Sbjct: 141 HAHIIKMGFGSEIYTTN--SLLNVYSKSGDIKSARLLFDQ 178
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 192/339 (56%), Gaps = 33/339 (9%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++MY KCGS+ AR +F+ + + + SW+ MI GYA +G E L LFE+M ++
Sbjct: 314 VKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA 373
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P+ TF+ V SAC +EE ++ FE+M ++ I P +HY +V +LG G L EA
Sbjct: 374 -KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEA 432
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
I Q + P + W AL N +IH +++L + A E +++L+P A
Sbjct: 433 YNLIMQ-MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQ 491
Query: 482 --------DPKKIPTPP-PKKRTAISILDGKSRLVEFRN--------PTLYRDDEKLKAL 524
+K+ T KK A S ++ K+++ F + +Y + E++ L
Sbjct: 492 AGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGL 551
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
MKE+ Y P T V HD++ + K + HSERLAIA+GLISTP T L I KNLR+C
Sbjct: 552 --MKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICE 609
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH AIK +S+I RE+ VRD R+HHFKDG CSCGDYW
Sbjct: 610 DCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E V+ ++ D G+ D F + + C E+ +++H++ +Q+ D+ + +
Sbjct: 158 EAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAAL 217
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCG + AR VFD + R W+ M+ Y+ NG D L L +M GL+P E
Sbjct: 218 IDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTE 277
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
T + SA A+ + +H S + EF + LV + KCG + A+
Sbjct: 278 ATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK--TALVDMYAKCGSVRVARNLF 335
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
E +L + W A+ +HG
Sbjct: 336 E-RLGVKRVVS-WNAMITGYAMHG 357
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L + C K + K++H + D V+ K++ +Y C S++ AR +FD +
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---E 396
++ W+++I GYA NG + +QL+ QM GL P+ TF V AC + AIE E
Sbjct: 138 KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGRE 197
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA-LRN 455
H E + G L+ + KCG + A++ ++ L + A W + L
Sbjct: 198 IHEHVVQTGWEKDVFVGA----ALIDMYAKCGCVGSAREVFDKILVRD--AVLWNSMLAA 251
Query: 456 YAR-IHGDIDLEDHAEELMVDLDPSKA 481
Y++ H D L +E ++ L P++A
Sbjct: 252 YSQNGHPDACLSLCSEMVLTGLRPTEA 278
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 206/392 (52%), Gaps = 32/392 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+ ++EL K G K F ++ + CG + +H + S ++ D+VL N +
Sbjct: 247 RTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGI 306
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ M+G+CGS+ ++ F M R SW +MI+ +A NG G E L+ F M G P+E
Sbjct: 307 VNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDE 366
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+++ S C A + +A H M ++ + PG +HY+ LV +L + G L A++ +E
Sbjct: 367 LTFVSILSVCAHAGLLRDARGHLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVE 426
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+P+EP W L ++ GD+ + + DP + P
Sbjct: 427 T-MPYEPHGSAWLTLLAACKMQGDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVN 485
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFRNPTL----YRDD--EKLKALNQMKEST 531
K + KK+ S ++ R+ EF+ + +RD E ++ +M E+
Sbjct: 486 EMRIVRKAMEERGIKKQAGCSYIEVHDRVHEFKAGEVSHPRHRDILYELMQIQRKMVEAG 545
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
V DTR V +D+++E KE L YHSE+LAI GL++T T LR++KNLRVC DCH AIK
Sbjct: 546 CVRDTRLVSYDLEEEEKENLLTYHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIK 605
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+SRI GR ++VRD RFHHF+DG CSC DYW
Sbjct: 606 FISRICGRRIVVRDCNRFHHFEDGVCSCNDYW 637
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D K D + +L C + + + + +H+ + G L N +I MYG CG +
Sbjct: 50 DPSSKPDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVD 109
Query: 330 DARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A++ FD + R+ SW+ MI GYA N E L+LF+ M G QPN+ TF++ A
Sbjct: 110 RAKKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAA 169
Query: 389 GSADAI-EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G+ A+ E + IH E + E T L+ GKC
Sbjct: 170 GNLGALPEGSAIHEEVL--EHDCETDTAVATALINFFGKC 207
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 263 KEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L MD +G + + F + + GN +H+ L+ D + +
Sbjct: 141 KEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATAL 200
Query: 319 IEMYGKC-----GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
I +GKC G + +FD M DR SW ++ YA + ++LF++M G
Sbjct: 201 INFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEG 260
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+P TF++V ACG A+ E +H M S ++ G+V + G+CG + E
Sbjct: 261 YKPTRFTFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQN--GIVNMFGRCGSVEE 318
Query: 433 AQQFIEQKL 441
+ ++ L
Sbjct: 319 SSSAFQEML 327
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 217/399 (54%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ ++A++ ++ V+ D ++ C + E ++VH Y + D+
Sbjct: 613 QNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVF 672
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + +I+MY KCGS+ DA +F+ DR++ W MI+G A +G G E ++LFE M G
Sbjct: 673 LGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEG 732
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PNE +F+ V +AC A +EE +F M+ +GI PG EH+ +V + G+ G L E
Sbjct: 733 ITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEI 792
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTP---- 489
++FI + W + + R+H +I++ + +++L+P A P + +
Sbjct: 793 KEFIHNN-AISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICAT 851
Query: 490 ------PPKKRTAI-----------SILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
K R+ + S + K+++ F ++ +Y ++L +
Sbjct: 852 EHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDEL--I 909
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++KE Y D V+ D++QE ++ L YHSE+LAIAYG+IST TP+R++KNLRVC
Sbjct: 910 GRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCI 969
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHN IK S ++GRE+I+RD RFHHFK G CSC DYW
Sbjct: 970 DCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 28/242 (11%)
Query: 256 LCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L + G + A+EL+ K V A + F L + K++H L+ + D
Sbjct: 495 LMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDD 554
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHM--------ADRSMD-------SWHLMINGYADN 356
+ N +I+MY KCG M A +F H+ ++ S D SW M++GY N
Sbjct: 555 GFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQN 614
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
G ++ L+ F M ++ ++ T +V SAC SA +E +H K I G +
Sbjct: 615 GRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK----IGHGLD 670
Query: 416 HYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+LG ++ + KCG L +A Q + W ++ + +HG ELM
Sbjct: 671 VFLGSSIIDMYVKCGSLNDAWLIFNQ--AKDRNVVLWTSMISGCALHGQGREAVRLFELM 728
Query: 474 VD 475
++
Sbjct: 729 IN 730
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
Y N++ +H +++ G + N ++ +Y K ++ A ++F+ + + SW ++I+G
Sbjct: 304 YPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISG 361
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+A GL + L LF +M+ G+ PN+ T V +C S
Sbjct: 362 FARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSS 399
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H + L++ + D VLNN +++ Y KC A ++F MA++ SW++M++ Y
Sbjct: 407 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQ 466
Query: 356 NGLGDEGLQLFEQM 369
G + + LF Q+
Sbjct: 467 IGDMQKSVDLFRQL 480
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 213/386 (55%), Gaps = 45/386 (11%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEMYG 323
L +K V D + TLF C + A K+ D + T++ L+L+ N VI MY
Sbjct: 516 LTEKDVIPDWVTYVTLFRGCADI----GANKLGDQIIGHTVKVGLILDTSVVNAVITMYS 571
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG +++AR+ FD ++ + + SW+ MI GY+ +G+G + +++F+ + G +P+ +++A
Sbjct: 572 KCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVA 631
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
V S C + +EE +F+ MK + ISPG EH+ +V +LG+ GHL EA+ I++ +P
Sbjct: 632 VLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDE-MPM 690
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP---- 483
+PTAE W AL + + HG+ DL + A + + DL D K+D
Sbjct: 691 KPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQV 750
Query: 484 -KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKESTYVPDTR 537
K + KK S ++ +R+ F+ +P + EKL L + +
Sbjct: 751 RKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELME-----KIAHLG 805
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YV + ++ ++HSE+LA+A+G++S PA P+ I+KNLR+C DCH IK++S +
Sbjct: 806 YV-----RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVT 860
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE ++RD RFHHFK G CSC DYW
Sbjct: 861 DREFVIRDGVRFHHFKGGSCSCMDYW 886
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L + G+V+EA++++ KGV+ D++ + + C E K++H +++
Sbjct: 263 ISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLP 322
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + + ++E+Y KCG +A+RVF + DR+ SW ++I G+ G E ++LF Q
Sbjct: 323 HIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQ 382
Query: 369 MRKLGLQPNEQTFLAVF--SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
MR L +Q LA C + D + +H +KS G + L+ + K
Sbjct: 383 MRA-ELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKS--GHTRAVVVSNSLISMYAK 439
Query: 427 CGHLFEAQ 434
CG+L A+
Sbjct: 440 CGNLQNAE 447
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N ++ Y K GS++DA +F M R + SW+ +++GY +G L +F MR
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G PN TF V +CG A E + + S+F + LV +L +CG
Sbjct: 151 QTGDSLPNAFTFGCVMKSCG-ALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209
Query: 430 L-FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
+ F ++QF K P L YA+ HG DHA E+
Sbjct: 210 MDFASKQFSRIKNPTIICRN--SMLVGYAKSHG----VDHALEI 247
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G E++EL ++ + D TL C N ++H L+S +V
Sbjct: 369 QYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVV 428
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++N +I MY KCG++ +A +F+ MA+R + SW MI Y+ G + + F+ M
Sbjct: 429 VSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMS--- 485
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGL 420
N T+ A+ A A E+ + M +E + P Y+ L
Sbjct: 486 -TRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTL 531
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
++ N ++ Y K + A +F M +R + SW+++I+ + +G E L + M
Sbjct: 225 IICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHG 284
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++P+ T+ + +AC ++E +H + +++ I P +V + KCG
Sbjct: 285 KGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS--AMVELYAKCGCF 342
Query: 431 FEAQQ 435
EA++
Sbjct: 343 KEAKR 347
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G KEA+E+ + GVK ++ F ++ E C + + +H + + + +L+
Sbjct: 54 QDGYGKEALEIFQRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELI 113
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++ MY KCG + +AR VFD M + +W ++ G A +G +E L +M G
Sbjct: 114 VATALVNMYAKCGKLVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEG 173
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TFL++ AC + ++EA F +M ++ G P EH+ ++ +LG+ G L EA
Sbjct: 174 IKPNNVTFLSLVFACSHSGYLDEARDCFIAM-ADHGFFPLPEHFRCVIDLLGRGGRLEEA 232
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
Q+ I+ +PFEP W + + R+ D+ + A E +++P++
Sbjct: 233 QEVIDT-MPFEPGLTAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAA 291
Query: 481 ----ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
D KK+ KK +S ++ K+RL EF + +Y + KL
Sbjct: 292 LERWDDVKKVRRLMERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLIYEELRKLTL- 350
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++KE+ YVPDT VLH++D+E K+ L +HSERLA+ YGLI+TP T L ++ NLR+C
Sbjct: 351 -EIKEAGYVPDTSLVLHNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCS 409
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH A K +S I RE++VRD RFH F G CSC DYW
Sbjct: 410 DCHTAFKYISTISNREIVVRDANRFHTFATGGCSCKDYW 448
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + V+ ++ MYG+C S+ +AR VF+ + + +W+ ++ YA +G G E L++F+
Sbjct: 7 LEAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIFQ 66
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+M++ G++ TF++V AC S A+ + +++ + G+ LV + KC
Sbjct: 67 RMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVAN-GLDRELIVATALVNMYAKC 125
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L EA++ +Q + A W A+ + HG I + +++LM ++ P +
Sbjct: 126 GKLVEAREVFDQMEGMDVVA--WTAIVAGSAQHGHI---EESKDLMRRMELEGIKPNNV 179
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 225/440 (51%), Gaps = 34/440 (7%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK--- 271
S+ + G+ +++ + + P ++ L ++ L Q G +E+++L ++
Sbjct: 363 SWNAILSGYVNAGRIDEAKSFFEEMP--ERNLLTWTVMISGLAQNGFGEESLKLFNRMKS 420
Query: 272 -GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
G + F C + +++H ++ L N +I MY KCG +
Sbjct: 421 EGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEA 480
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F M SW+ MI +G G + L+LFE M K + P+ TFL V S C
Sbjct: 481 AHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSH 540
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A +EE +F+SM +GI PG +HY ++ +L + G EA+ IE +P EP W
Sbjct: 541 AGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIET-MPVEPGPPIW 599
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDP--------------------SKADPKKIPTPP 490
EAL RIHG++DL A E + +L P A +K+
Sbjct: 600 EALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDK 659
Query: 491 -PKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
KK S ++ ++++ F +P + L+ L +M++ Y+PDT++VLHD+
Sbjct: 660 GVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDM 719
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+ E KE L HSE+LA+ +GL+ P +R+ KNLR+CGDCHNA K MS++V RE++V
Sbjct: 720 ESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVV 779
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD KRFHHFK+G+CSCG+YW
Sbjct: 780 RDGKRFHHFKNGECSCGNYW 799
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 48/244 (19%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS----TIRGD 311
G EA+E+ K G++ D + ++ C N ++ + K+VH Y L++ ++
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFS 329
Query: 312 LVLNNKVIEMYGKCGSMTDARRV-------------------------------FDHMAD 340
L +NN + +Y KCG + +AR+V F+ M +
Sbjct: 330 LSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-I 399
R++ +W +MI+G A NG G+E L+LF +M+ G +P + F AC A+ +
Sbjct: 390 RNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQL 449
Query: 400 HFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
H + ++ F +S G L+ + KCG + EA + +P+ + W A+
Sbjct: 450 HAQLVRLGFDSSLSAGN----ALITMYAKCG-VVEAAHCLFLTMPYLDSVS-WNAMIAAL 503
Query: 458 RIHG 461
HG
Sbjct: 504 GQHG 507
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+K+ D + T R +L +I Y + G + AR+ D M ++ + +W+ MI+GY
Sbjct: 213 ARKLFD---EMTERDELSWTT-MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVH 268
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSE------F 408
+G E L++F +M LG+Q +E T+ +V SAC +A +H +++E F
Sbjct: 269 HGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDF 328
Query: 409 GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+S L + KCG + EA+Q Q +P + W A+ + G ID
Sbjct: 329 SLSVNN----ALATLYWKCGKVDEARQVFNQ-MPVKDLVS-WNAILSGYVNAGRID 378
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 37/175 (21%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH----------- 337
NP Y A+ VH + + S + + N++I++Y K + A +FD
Sbjct: 27 NPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTT 86
Query: 338 ----------------------MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ R ++ MI GY+ N G ++LF + + G +
Sbjct: 87 LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146
Query: 376 PNEQTFLAVFSACGSADAIEEAF--IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
P+ TF +V A E+ IH +KS G + L+ V KC
Sbjct: 147 PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLN--ALLSVFVKCA 199
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 197/373 (52%), Gaps = 35/373 (9%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C K VH + ++ ++ +++MY KCGS+ +AR++FD M D+
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK 479
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
++ +W+ MI GY +G G E L+LF +M + G+ P TFL++ AC + + E F
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIF 539
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
SM + +G P +EHY +V +LG+ G L A +FIE ++P EP W AL IH
Sbjct: 540 HSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIE-RMPLEPGPAVWGALLGACMIHK 598
Query: 462 DIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPPKKRTAISILDGKSRL 506
+ ++ + A + + LDP PK K+ ++ G + L
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCT-L 657
Query: 507 VEFRN---------------PTLYRDDEKLKALNQMKESTYVPDT-RYVLHDIDQEAKEQ 550
+E + ++ EKL +M+E+ Y +T LHD++ E KE
Sbjct: 658 IEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG--KMREAGYQAETVTTALHDVEDEEKEL 715
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
+ HSE+LAIA+GLIST T +RIIKNLRVC DCH A K +S+I R ++VRD RFH
Sbjct: 716 MVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFH 775
Query: 611 HFKDGKCSCGDYW 623
HFK+G CSCGDYW
Sbjct: 776 HFKNGICSCGDYW 788
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ + +Y + + AR++FD ++S+ SW+ MI+GY NGL D + LF++M
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-Q 410
Query: 374 LQPNEQTFLAVFSACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
L PN T ++ SAC A+ I E ++S +S LV + KCG
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVST------ALVDMYAKCG 464
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ EA+Q + L + W A+ +HG
Sbjct: 465 SIVEARQLFD--LMVDKNVVTWNAMITGYGLHG 495
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + +L + + ++++Y K AR+VFD M +R W+ MI+G++ N
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
++ +++F M +GL + T V +A + + + S+ G+
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG-MGIQCLASKKGLHSDVYVLT 253
Query: 419 GLVGVLGKCG 428
GL+ + KCG
Sbjct: 254 GLISLYSKCG 263
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E ++ ++++D G+ D++ T+ + Y + + + D+ + +
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I +Y KCG R +FD + + S++ MI+GY N + + LF ++ G + N
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 379 QTFLAVF 385
T + +
Sbjct: 316 STLVGLI 322
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 215/392 (54%), Gaps = 33/392 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ L + GV+ D ++ G+ ++VH + + + +L+L N +
Sbjct: 271 KEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENAL 330
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCG + DAR VF+ M R + SW +I+ Y G G + + +F +MR GL P+
Sbjct: 331 IDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDS 390
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
F++V +AC A +++ +F M +E GI+P EH+ +V +LG+ G + EA FI
Sbjct: 391 IAFVSVLAACSHAGLLDDGRYYFNLM-AECGITPKLEHFACVVDLLGRAGKIDEAYGFIR 449
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------A 481
Q +P EP W L + R++ ++++ A + ++ L+P A
Sbjct: 450 Q-MPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWA 508
Query: 482 DPKKIPTPPPKKRTA-------ISILDGKSRLV--EFRNPTLYRDDEKLKAL-NQMKEST 531
D I + +K + + DG + + +P + E+L L +MKE
Sbjct: 509 DVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELG 568
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y+P+T LHD+++E KE L HSE+LA+A+ +I+T TP+R+ KNLRVCGDCH A K
Sbjct: 569 YMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAK 628
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S+I RE+I+RD RFHHF++G CSCGDYW
Sbjct: 629 LISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H L+ + +L + N +I MYGKC S+ +A++V D + R + SW+ M++ YA NG
Sbjct: 141 QIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNG 200
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
++ L+L +M L L+PN+ T ++ A
Sbjct: 201 RFNDALELCREMEALNLKPNDCTMASLLPA 230
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 297 KKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
KK+H L +R + + K++ +Y CG AR +FD + D+++ +++MI Y +
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
N L + L +++ M G P+ T+ V A +D++ IH +K G+
Sbjct: 98 NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLK--IGLDLNL 155
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
GL+ + GKC L EAQQ +++ +P + + YA+
Sbjct: 156 YVGNGLIAMYGKCKSLKEAQQVLDE-IPCRDVVSWNSMVSVYAQ 198
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 202/388 (52%), Gaps = 37/388 (9%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L D K D C E + +H + S IR ++ + +I+MY KCGS
Sbjct: 248 LADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGS 307
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFS 386
+ +A VF+ + + +W+ MI GYA +G + L+LF++M+ + GLQP + TF+
Sbjct: 308 LEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQ 367
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A + E FESM E+GI P EHY LV +LG+ G L A + I + + E
Sbjct: 368 ACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEII-KNMNMEAD 426
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT------------------ 488
+ W ++ ++HG+ L E ++ + S + + +
Sbjct: 427 SVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNL 486
Query: 489 ---PPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKA------LNQMKEST----YVPD 535
K IS ++ +++ EFR D E LK+ L +M E YVP+
Sbjct: 487 MKEKGIVKEPGISTIEIDNKVHEFRAG----DREHLKSKEIYTMLRKMSERIKSHGYVPN 542
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T VLHD+++ KE++L HSERLAIAYGLIST +PL+I KNLRVC DCH K++S+
Sbjct: 543 TNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISK 602
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
I GR++++RD RFHHF DG CSC D+W
Sbjct: 603 ITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
LV + +I Y K G++ AR +FD M +R + SW++MI+GY+ +G + L LF+++
Sbjct: 190 LVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLA 249
Query: 372 LGL-QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G +P+E T +A SAC A+E +IH S I + L+ + KCG
Sbjct: 250 DGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSR--IRLNVKVCTALIDMYSKCGS 307
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L EA + A W A+ +HG
Sbjct: 308 LEEAVLVFNDTPRKDIVA--WNAMITGYAMHG 337
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
VLN K+ Y G + + +F D + + IN + NGL D+ L+ Q+
Sbjct: 63 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 122
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ PNE TF ++ +C + IH +K G+ P GLV + K G +
Sbjct: 123 QINPNEFTFSSILKSCSTKSG---KLIHTHVLKFGLGLDPYVA--TGLVDIYAKGGDVVS 177
Query: 433 AQQFIEQ 439
AQ+ ++
Sbjct: 178 AQKVFDR 184
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 199/360 (55%), Gaps = 38/360 (10%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K+ H Y L++ + D+ + I+MY K G + ++R VFD + ++ + SW+ +I Y
Sbjct: 457 GKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGV 516
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G+E ++LFE+MRK+G P+ TF+ + + C A +EE +F M++ GI P E
Sbjct: 517 HGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLE 576
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY ++ +LG+ G L +A + + + +P +P + W +L ++ R G++++ E +++
Sbjct: 577 HYACVMDMLGRAGRLDDALRLVHE-MPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLE 635
Query: 476 LDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEF----- 509
L+P + + I +K S ++ ++ F
Sbjct: 636 LEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDN 695
Query: 510 ------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAY 563
+R EK +M + Y P+T VLHD+D+E K + L HSE+LAI +
Sbjct: 696 LLPQSKEMSMTWRKLEK-----KMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICF 750
Query: 564 GLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GL++T T LRI KNLR+C DCHNA K MS + GRE+I+RDNKRFHHFKDG CSCGDYW
Sbjct: 751 GLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K+VH + L+ + D + ++ +Y CG + AR +FD M ++S SW+ MI+GY+
Sbjct: 356 GKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQ 415
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
NGL ++ L LF ++ G QP++ ++V AC A+
Sbjct: 416 NGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSAL 454
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ D AD F + + C + +H ++ + D+ + N +I MYGK G
Sbjct: 22 ITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGF 81
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR--KLGLQPNEQTFLAVF 385
+ A +VF +M R++ SW+ +I+G+++NG + + +M + GL P+ T + V
Sbjct: 82 VDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVL 141
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C ++ I + + G+S LV + KCG+L EAQ ++
Sbjct: 142 PVCAREVDVQMG-IRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 266 IELM--DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
+E+M ++G+ D + T+ +C + ++H ++ + D+ +NN +++MY
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFL 382
KCG +T+A+ +FD ++ SW+ MI G G E LF +M+ + ++ NE T L
Sbjct: 181 KCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240
Query: 383 AVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IE 438
+ AC + +H S++ F + G V KCG L A++ +E
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVAN--GFVAAYAKCGMLICAERVFYSME 298
Query: 439 QKLPFEPTAEFWEALRNYARIHGD 462
K T W AL +GD
Sbjct: 299 TK-----TVNSWNALIGGCAQNGD 317
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 253 LARLCQEGKVKEAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+ LC +G + EA L M + ++ + + C + K++H Y ++
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHG 266
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ D ++ N + Y KCG + A RVF M ++++SW+ +I G A NG + L L+
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYI 326
Query: 368 QMRKLGLQPNEQTFLAVFSA 387
QM GL P+ T ++ A
Sbjct: 327 QMTYSGLVPDWFTIGSLLLA 346
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 209/401 (52%), Gaps = 36/401 (8%)
Query: 258 QEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA IE+ G++ D ++ C + + K +H ++ I +
Sbjct: 241 QNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVN 300
Query: 314 LNNKVI----EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L N +I +MY KCG + +A VF+ M ++ + SW+ +I G A NGL + L +F +M
Sbjct: 301 LQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM 360
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G+ PNE TF+ V AC ++E HF SM + GI P +HY +V +LG+ G
Sbjct: 361 KNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGL 420
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------- 478
L EA++ IE +P P W AL + HGD ++ + +++L P
Sbjct: 421 LNEAEKLIES-MPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSN 479
Query: 479 ---SKADPKKIPTP-------PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKA 523
SK D + + K S+++ + EF +P + + + L
Sbjct: 480 IFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNE 539
Query: 524 L-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+ ++K Y PDT V DID+E KE L HSE+LAIA+GL++ TP+RI+KNLR+
Sbjct: 540 MAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRI 599
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH A K++S+ RE++VRD RFH+FK+G CSC DYW
Sbjct: 600 CNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 47/177 (26%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+C L E G K++HD+ L+ D+ + N +I MY CG+M DAR++FD
Sbjct: 138 ACAVRLLEFGG--------KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE 189
Query: 338 ----------------------------------MADRSMDSWHLMINGYADNGLGDEGL 363
M ++ M SW +I+GY NG+ +E L
Sbjct: 190 SPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEAL 249
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGL 420
+F +M G++ +E ++V SAC ++ M I G E Y+ L
Sbjct: 250 VMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG-----KMIHGLVIRMGIESYVNL 301
>gi|15220520|ref|NP_174264.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169106|sp|Q9C6G2.1|PPR63_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g29710, mitochondrial; Flags: Precursor
gi|12321411|gb|AAG50776.1|AC079288_5 hypothetical protein [Arabidopsis thaliana]
gi|332192999|gb|AEE31120.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 475
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 246 LPPSVA------DLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYEN 295
+ PSVA LC +G +EA+E++D KG D L +LCG P+ E
Sbjct: 78 VSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEA 137
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ VH+ + D+ N +IEMY C S+ DA +VF+ M + + + +M+ + +
Sbjct: 138 ARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVN 197
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
NG G+E + LF + ++ G +PN + F VFS C ++E + F++M E+GI P E
Sbjct: 198 NGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSME 257
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY + +L GHL EA F+E ++P EP+ + WE L N +R+HGD++L D EL+
Sbjct: 258 HYHSVTKMLATSGHLDEALNFVE-RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK 316
Query: 476 LDPSKADPKKIPTPPPKKRTAISILDGKSRL----------VEFRNPTLYRDDEKLKAL- 524
LD ++ D K + + +R V+ +P + E L +L
Sbjct: 317 LDATRLDKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 376
Query: 525 NQMKESTYVPDTRYVLHDI-DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+Q+KE YVPDTRY I E KEQ Y E +A+ L+ + R+ + ++ N+R+
Sbjct: 377 SQLKEMGYVPDTRYYRSLIMAMENKEQIFGYR-EEIAVVESLLKSKPRSAITLLTNIRIV 435
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH+ +K+MS I GR++I RD K +H FK+G C C + W
Sbjct: 436 GDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 197/373 (52%), Gaps = 35/373 (9%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C K VH + ++ ++ +++MY KCGS+ +AR++FD M D+
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK 479
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
++ +W+ MI GY +G G E L+LF +M + G+ P TFL++ AC + + E F
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIF 539
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
SM + +G P +EHY +V +LG+ G L A +FIE ++P EP W AL IH
Sbjct: 540 HSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIE-RMPLEPGPAVWGALLGACMIHK 598
Query: 462 DIDLEDHAEELMVDLDPSKAD---------------PKKIPTPPPKKRTAISILDGKSRL 506
+ ++ + A + + LDP PK K+ ++ G + L
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCT-L 657
Query: 507 VEFRN---------------PTLYRDDEKLKALNQMKESTYVPDT-RYVLHDIDQEAKEQ 550
+E + ++ EKL +M+E+ Y +T LHD++ E KE
Sbjct: 658 IEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG--KMREAGYQAETVTTALHDVEDEEKEL 715
Query: 551 ALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 610
+ HSE+LAIA+GLIST T +RIIKNLRVC DCH A K +S+I R ++VRD RFH
Sbjct: 716 MVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFH 775
Query: 611 HFKDGKCSCGDYW 623
HFK+G CSCGDYW
Sbjct: 776 HFKNGICSCGDYW 788
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++ + +Y + + AR++FD ++S+ SW+ MI+GY NGL D + LF++M
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-Q 410
Query: 374 LQPNEQTFLAVFSACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
L PN T ++ SAC A+ I E ++S +S LV + KCG
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVST------ALVDMYAKCG 464
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ EA+Q + L + W A+ +HG
Sbjct: 465 SIVEARQLFD--LMVDKNVVTWNAMITGYGLHG 495
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + +L + + ++++Y K AR+VFD M +R W+ MI+G++ N
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
++ +++F M +GL + T V +A + + + S+ G+
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG-MGIQCLASKKGLHSDVYVLT 253
Query: 419 GLVGVLGKCG 428
GL+ + KCG
Sbjct: 254 GLISLYSKCG 263
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E ++ ++++D G+ D++ T+ + Y + + + D+ + +
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I +Y KCG R +FD + + S++ MI+GY N + + LF ++ G + N
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 379 QTFLAVF 385
T + +
Sbjct: 316 STLVGLI 322
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 197/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + + DY + +R ++ + +I+MY KCG + +A ++F M +++ +W
Sbjct: 253 CAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTW 312
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+++I+GYA NG G+ LQ F +M +P+E TFL V AC + E +F SMK
Sbjct: 313 NVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKE 372
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
EFG+ P EHY +V +LG+ G L EAQQ I Q + +P W L RIHG+I L
Sbjct: 373 EFGLRPRIEHYGCMVDLLGRAGFLDEAQQLI-QAMSMQPDPIIWRELLGACRIHGNIQLG 431
Query: 467 DHAEELMVDLDPSKA--------------------------DPKKIPTPPPKKRTAISIL 500
+ A + +++L+P+ D +++ P I +
Sbjct: 432 EFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNV 491
Query: 501 DGKSRLVEFRNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ + + P + L +N ++K + YV DT +DI++E KE +L+YHSE+L
Sbjct: 492 VYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHSEKL 551
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+GL+ +P+ LRI+KNLR+C DCH KI+S++ R++ VRD RFHHF G CSC
Sbjct: 552 ALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGACSC 611
Query: 620 GDYW 623
DYW
Sbjct: 612 KDYW 615
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ G+ D+S F T+ + E K +H +Q ++ ++ ++ MYG C
Sbjct: 132 QMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCS 191
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S++DAR+VFD + DR++ SW+ +I GY N + + + +F +M+ G +P E T + V
Sbjct: 192 SVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLL 251
Query: 387 ACGSADAIEEA-FI--HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC A+ + +I + + + + GT L+ + KCG + EA++ +
Sbjct: 252 ACAHLGALNQGRWIDDYIDHNRLRLNVFVGT----ALIDMYAKCGVVDEAEKIFK 302
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 215/405 (53%), Gaps = 35/405 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A G+ +EA+ L D+ G + ++ C + K VH Y
Sbjct: 216 AMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSR 275
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
++ + L +++MY KCG++ A VF+ MA+R++ +W ++G A NG+G E LQLF
Sbjct: 276 GMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLF 335
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M G+QPN +F+AV C A ++E F+SM ++G+ P EHY +V + G+
Sbjct: 336 KRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDPWPEHYGCMVDLYGR 394
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L +A FI +P EP W AL N +RIH +DL +A + ++ ++ S+ D +
Sbjct: 395 AGRLDDAISFI-NDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIE-SENDAAHV 452
Query: 487 ----------------------PTPPPKKRTAISILDGKSRLVEF----RNPTLYRDDEK 520
KK S ++ ++ EF R Y + E
Sbjct: 453 QLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIEL 512
Query: 521 LKAL--NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+ A +++ Y +TR VL DI++E KE A+ HSE+LA+A+GLI P +RI+K
Sbjct: 513 MLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVK 572
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH IK++S++ RE+++RD RFHHFK G+CSC DYW
Sbjct: 573 NLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 617
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ G + AR +FD M R +W MI GY G E L LF++M
Sbjct: 179 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 238
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHF--ESMKSEFGISPGTEHYLGLVGVLGKC 427
G E T ++V +AC ++ ++H+ S + I GT LV + KC
Sbjct: 239 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGT----ALVDMYSKC 294
Query: 428 GHLFEAQQFIEQ 439
G + A + E
Sbjct: 295 GAVVTAMEVFES 306
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 205/404 (50%), Gaps = 49/404 (12%)
Query: 261 KVKEAIELMDK------GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
+ K+A++L D G + D L + C + + +KV +Y + G+L +
Sbjct: 206 RTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKV 265
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I MY KCG + A +VF +S+ +W MI+G A NG G + + FE+M + G+
Sbjct: 266 RNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGV 325
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+EQTF V SAC + ++E F F+ M E+ + P HY +V ++G+ G L +A
Sbjct: 326 APDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAY 385
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------- 481
+ + + + P A W L RIHG IDL + +++L +A
Sbjct: 386 ELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAV 445
Query: 482 -------------DPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEK 520
K I T P + ++ + EF R +Y EK
Sbjct: 446 EDWGKVAEVRKLMKEKGIQTTP-----GCTTVELNGEIHEFIAADASHPRKAEIY---EK 497
Query: 521 LKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L +N+ ++ + YVP+ LHD+D E KE AL YHSE+LAIA+ L+ TP P+R+ KN
Sbjct: 498 LDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRLAKN 557
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCHN K+ S + R +IVRD RFHHFK+ +CSC DYW
Sbjct: 558 LRVCVDCHNFTKVFSGVYHRLVIVRDRTRFHHFKEFQCSCNDYW 601
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 281 YTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
++L + G+ + +A+++H + D +L ++ Y CG AR+VFD M
Sbjct: 129 FSLSIVLGHCRALAHARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPV 188
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMR--KLGLQPNEQTFLAVFSACGSADAIEEAF 398
R +W+++I Y N + L+LF+ MR + G +P++ T + + AC S A++
Sbjct: 189 RDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALD--- 245
Query: 399 IHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQ 435
F E+ + G L L+ + KCG + +A Q
Sbjct: 246 --FGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAYQ 284
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 212/397 (53%), Gaps = 31/397 (7%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+E+ +K V+ D++ F ++ C + +HD + S I ++V
Sbjct: 186 QNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVV 245
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++ M+ +CG + AR VF M + ++ W MI+GY +G G E +++F +M+ G
Sbjct: 246 LATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARG 305
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN TF+AV SAC A I+E F SMK E+G+ PG EH++ +V + G+ G L EA
Sbjct: 306 VVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEA 365
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
QF++ E W A+ ++H + DL E +++ +P
Sbjct: 366 YQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYAL 425
Query: 480 -------KADPKKIPTPPPKKRTAISIL--DGKSRLVEFRNPTLYRDDEKLKALNQM--- 527
++ + KK+ S + D +S L + + +E L+++
Sbjct: 426 AGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWR 485
Query: 528 -KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
K++ Y P +H+++ E +E AL YHSE+LA+A+GL+ T LRI+KNLR+C DC
Sbjct: 486 CKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDC 545
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK +S ++ RE+IVRD RFHHF++G CSC DYW
Sbjct: 546 HSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + VH + S D + +I Y K + AR+VFD M
Sbjct: 111 FTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMP 170
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-EAF 398
RS+ +W+ MI+GY NGL +E +++F +MR+ ++P+ TF++V SAC +++ +
Sbjct: 171 QRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCW 230
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+H + S GI+ LV + +CG + A+ + E W A+ +
Sbjct: 231 LHDCIVGS--GITMNVVLATSLVNMFSRCGDVGRARAVFYSMI--EGNVVLWTAMISGYG 286
Query: 459 IHG 461
+HG
Sbjct: 287 MHG 289
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 211/385 (54%), Gaps = 32/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ GV+ + + C + +++H+Y + + + + +++MY KCG+
Sbjct: 209 LLWNGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGN 268
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A RVF + + +W +MI G+A +G D+ LQ F +M+ G+ P+E FLA+ +A
Sbjct: 269 IKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTA 328
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + +++ FESM+ ++ I P +HY +V +LG+ G L EA FI Q +P P
Sbjct: 329 CSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFI-QSMPINPDF 387
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTPP 490
W AL R H +I++ + E ++ L+P D +++ T
Sbjct: 388 VIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLM 447
Query: 491 P----KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
+K S ++ + ++ F R + E++ A K+ Y+P+T +
Sbjct: 448 KNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITA--SAKQEGYMPETAW 505
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLH+I++E KE AL HSE+LA+A+GLIST + +RI+KNLRVCGDCH+ +K S++
Sbjct: 506 VLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSR 565
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD KRFHHFKDG CSCGDYW
Sbjct: 566 REIILRDIKRFHHFKDGTCSCGDYW 590
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 217/417 (52%), Gaps = 42/417 (10%)
Query: 241 AGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENA 296
GD V+ S+ +A Q EA+ L G AD S ++ C + E
Sbjct: 446 TGDSVVWNSI--IAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG 503
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++ H + L+ DL+LNN +++MY KCGS+ DA+ +F+ MA + + SW MI G A N
Sbjct: 504 RQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQN 561
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G E L LFE M+ G +PN T L V AC A + E + +F SM + +GI PG EH
Sbjct: 562 GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH 621
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y ++ +LG+ L + + I + + EP W L + R ++DL +A + ++ L
Sbjct: 622 YGCMLDLLGRAEKLDDMVKLIHE-MNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKL 680
Query: 477 DPSK-----------ADPKKIPTPPPKKRT----------AISILDGKSRLVEF-----R 510
DP A K+ +RT S ++ ++ F
Sbjct: 681 DPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKS 740
Query: 511 NPTLYRDDEKLKALNQ----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+P + DE + LNQ + + YVPDT +VL D++ E +E +L YHSE+LAI +G++
Sbjct: 741 HPQI---DEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIM 797
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S P +RI KNL++CGDCH K+++ + R +++RD R+HHF+DG CSCGDYW
Sbjct: 798 SFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 181 SNQYQN-------PGNQNFQQPRS-PNQWNNQQNQGYPQARNSYQQVSPGHQI--PNQLN 230
+NQY + PGN + Q ++ N+ Q + VS Q+ P
Sbjct: 175 ANQYLDVDIGVDGPGNATYAQASVWGRKYFNRNFDSLVQRTEPMRGVSKHLQLLRPTSSR 234
Query: 231 NVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFEL 286
++N +PP L C + A+ ++D +GV AD+ + L +
Sbjct: 235 CCSYSVNSSLVSPHYVPPETESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKC 294
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C K+VH + + L N +I MY K + +A+ +FD M +R++ SW
Sbjct: 295 CLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSW 354
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI+ Y++ L D ++L M + G+ PN TF +V AC +++ +H MK
Sbjct: 355 TTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ--LHSWIMK- 411
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
G+ L+ V K G L EA + + + + W ++ H D D
Sbjct: 412 -VGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVV--WNSIIAAFAQHSDGDEA 468
Query: 467 DHAEELM 473
H + M
Sbjct: 469 LHLYKSM 475
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV + F ++ C + Y+ K++H + ++ + D+ + + +I++Y K G + +A
Sbjct: 381 GVMPNMFTFSSVLRAC--ERLYD-LKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEA 437
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+VF M W+ +I +A + GDE L L++ MR++G ++ T +V AC S
Sbjct: 438 LKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSL 497
Query: 392 DAIE---EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+E +A +H + ++ L+ + KCG L E +FI ++
Sbjct: 498 SLLELGRQAHVHVLKFDQDLILNN------ALLDMYCKCGSL-EDAKFIFNRMA 544
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 193/354 (54%), Gaps = 32/354 (9%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH + ++ ++ +I+MY KCGS+T AR +FD M +++ +W+ MI+GY +G
Sbjct: 255 VHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGH 314
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
G E L+LF M ++P TFL+V AC A ++E F +M +FG P EHY
Sbjct: 315 GQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYA 374
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+V +LG+ G L +A +FI + +P EP W AL IH D +L A E + +LDP
Sbjct: 375 CMVDILGRAGQLKKALEFI-KAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDP 433
Query: 479 SK-----------ADPKKIPTPPPKKRTAISILDGKS---RLVEF--------------- 509
+ +K P ++ A K+ L+E
Sbjct: 434 ENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHP 493
Query: 510 RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
++ +Y + +KL +M E+ + +T VLHD+++E KE + HSE+LAIA+GLIST
Sbjct: 494 QSKAIYAELDKLT--GKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTE 551
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+RIIKNLRVC DCHN K +S+I R ++VRD RFHHFKDG CSCGDYW
Sbjct: 552 PGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + ++ I ++ + +Y + M AR++FD A++++ SW+ MI+G NGL
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGL 213
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTE 415
D + LF+ M+K + PN T ++ SAC A+ ++H +S + E + T
Sbjct: 214 TDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVST- 272
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
L+ + KCG + A++ + +P E W A+ + +HG A +L D
Sbjct: 273 ---ALIDMYAKCGSITVARELFDL-MP-EKNEVTWNAMISGYGLHGH---GQEALKLFYD 324
Query: 476 LDPSKADPKKI 486
+ S P +
Sbjct: 325 MLSSSVKPTGL 335
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +I ++ KCG + AR +F + + + S + MI+G+ NG ++ ++LF+++ G
Sbjct: 68 LLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSG 127
Query: 374 LQPNEQTFLAVF 385
+ + T + +
Sbjct: 128 ERVSSSTIVGLI 139
>gi|302808931|ref|XP_002986159.1| hypothetical protein SELMODRAFT_123584 [Selaginella moellendorffii]
gi|300146018|gb|EFJ12690.1| hypothetical protein SELMODRAFT_123584 [Selaginella moellendorffii]
Length = 378
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 209/367 (56%), Gaps = 27/367 (7%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L C + A+++H L S RG+ ++ ++++ MYGKCGS+ DAR +FD MA+R+
Sbjct: 13 LVRACARSRHLGEARRLHAQILDSPNRGNKLVLDQLVIMYGKCGSVEDAREMFDSMAERN 72
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
SW+ ++ YA G +E +++F +M G+ P+E F+ V +AC A +E ++ F
Sbjct: 73 EVSWNALLAAYAQRGDVEEVVEVFWRMIVEGVSPDEVAFVTVLTACSHAGLLETSWELFV 132
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
SM+ + G+ P ++HYL ++ VLG+ G L A++ I +PF P W L ++H D
Sbjct: 133 SMREDHGLRPLSQHYLCMIDVLGRSGLLSSAEELI-ATMPFVPDEVAWGMLLAACKVHKD 191
Query: 463 I-------------DLEDHAE------ELMVDLDPSKADPKKIP-TPPPKKRTAISILDG 502
+ D ED + L V ++ D +++ K+ IS++
Sbjct: 192 VSRAARIARDAVAADPEDCSSYVSLGNTLGVTVEEKDGDLRRLGFMTGLSKQPGISLIIV 251
Query: 503 KSRLVEFRN-----PTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
S + F + P ++ +L+ L +QM+ES YVPDT V H + + K + + +HS
Sbjct: 252 NSEMHSFTSGDESHPRIHEIRAELQRLTSQMRESGYVPDTHDVFHAVSEAGKSELVWHHS 311
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
E+LAIA+GLIST PL I KNLRVC DCH+A K +S++ GR ++VRD+ RFH F++G
Sbjct: 312 EKLAIAFGLISTSPGVPLWIRKNLRVCLDCHSATKFISKVTGRSIVVRDSYRFHKFENGS 371
Query: 617 CSCGDYW 623
CSCGD+W
Sbjct: 372 CSCGDFW 378
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 219/452 (48%), Gaps = 81/452 (17%)
Query: 243 DQVLPPSVADLARLCQEG-----------------------------KVKEAIELMD--- 270
D +L +V DL LCQ G + ++A+ L D
Sbjct: 138 DTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQ 197
Query: 271 ----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
K D +C L + C + E +++H Y ++ R L L N +I MY +CG
Sbjct: 198 GSSYKCEPDDVTCL-LLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCG 256
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A VF M ++++ SW MI+G A NG G E ++ FE+M ++G+ P++QTF V S
Sbjct: 257 CLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLS 316
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + ++E F M EFG++P HY +V +LG+ G L +A Q I + +P
Sbjct: 317 ACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLI-MSMVVKPD 375
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----------------------- 483
+ W L RIHG + L + +++L +A
Sbjct: 376 STMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKL 435
Query: 484 ---KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALN-QMKEST 531
K I T P S ++ K + EF RN +Y E L +N Q++ +
Sbjct: 436 MKNKSIQTTP-----GCSTIELKGAVHEFVVDDVSHSRNREIY---ETLDEINHQLRIAG 487
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YV + LH +D + K L +HSE+LA+A+G+++TP T LR+ NLRVC DCHN +K
Sbjct: 488 YVVELSSELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLK 547
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ S + R++++RD+ RFHHF+ G+CSC DYW
Sbjct: 548 LFSGVYNRDVVLRDHNRFHHFRGGRCSCSDYW 579
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ AD + C + +VH + + D +L V+++Y C D
Sbjct: 98 RGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGD 157
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR--KLGLQPNEQTFLAVFSAC 388
A +VFD M R +W++MI+ N + L LF+ M+ +P++ T L + AC
Sbjct: 158 ACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQAC 217
Query: 389 GSADAIE 395
+A+E
Sbjct: 218 AHLNALE 224
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 204/358 (56%), Gaps = 29/358 (8%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMING 352
++ +++H +S + ++N +I MY K GS+ DAR VF+ + R +W MI
Sbjct: 429 DHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIA 488
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
A +GLG+E L LFE+M + G++P+ T++ V SAC +E+ ++ M++ I P
Sbjct: 489 LAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIP 548
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
HY ++ + G+ G L EA FIE +P EP W +L ++H +++L + A E
Sbjct: 549 TPSHYACMIDLFGRAGLLQEAHAFIEN-MPIEPDVIAWGSLLASCKVHKNVELAEVAAER 607
Query: 473 MVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF-R 510
++ ++P + K + KK S + K+++ F
Sbjct: 608 LLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGV 667
Query: 511 NPTLY--RD---DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
+ L+ RD + K ++K+ +VPDT VLHD+++E KEQ L +HSE+LAIA+GL
Sbjct: 668 DDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGL 727
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
I TP T LRI+KNLRVC DCH+AIK +S++VGRE+IVRD RFHHFK+G CSC DYW
Sbjct: 728 ICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K +H +++ + + L N ++ Y K G + DA RVFD M +S+ SW+++++GYA
Sbjct: 31 TGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYA 90
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
G +E ++FE+M +P+ ++ A+ E A F M S+ P T
Sbjct: 91 KGGRLEEAHRVFEEMP----EPDSVSWTAMIVGYNQMGQFENAIGMFREMVSD--DVPPT 144
Query: 415 EHYLGLVGVLGKCG 428
+ L VL C
Sbjct: 145 Q--FTLTNVLASCA 156
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 44/259 (16%)
Query: 247 PPSVADLARLC---QEGKVKEAIELMDKGVKADA----SCFYTLFELCGNPKWYENAKKV 299
P SV+ A + Q G+ + AI + + V D + C + +KV
Sbjct: 108 PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKV 167
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD----------------------- 336
H + ++ + + + N ++ MY K G A+ VFD
Sbjct: 168 HSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLV 227
Query: 337 --------HMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSA 387
M +R + SW+ MI+GY +G E L +F +M +P++ T + SA
Sbjct: 228 DLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSA 287
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE-P 445
C + + ++ IH +++EF + L+ + K G + AQ+ IEQ +
Sbjct: 288 CANLENLKLGKQIHAHIIRTEFDTFGAVGN--ALISMYSKSGGVEIAQKIIEQSMISNLD 345
Query: 446 TAEFWEALRNYARIHGDID 464
F L Y ++ GDI+
Sbjct: 346 VIAFTALLDGYVKL-GDIN 363
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 38/162 (23%)
Query: 258 QEGKVKEAIE-----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G +EA++ LMD K D + C N + + K++H + +++
Sbjct: 254 QHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFG 313
Query: 313 VLNNKVIEMYGKCG-----------SMTD----------------------ARRVFDHMA 339
+ N +I MY K G SM ARR+FD +
Sbjct: 314 AVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLR 373
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
R + +W MI GY NG + ++LF M K G +PN T
Sbjct: 374 VRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTL 415
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y K G + +A RVF+ M + SW MI GY G + + +F +M +
Sbjct: 83 NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142
Query: 376 PNEQTFLAVFSACGSADAI 394
P + T V ++C + + +
Sbjct: 143 PTQFTLTNVLASCAAVECL 161
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 206/383 (53%), Gaps = 28/383 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L++K D + C + ++ +++H Y +++ D + N +++MY KCG+
Sbjct: 490 LVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ AR +FD + + + SW +MI GY +G G E + LF QMR+ G++P+E +F+++ A
Sbjct: 550 LLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYA 609
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + ++E + F M+ E I P EHY +V +L + G+L +A +FIE +P P A
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIEN-MPIPPDA 668
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKI 486
W AL RIH D+ L + E + +L+P K K+I
Sbjct: 669 TIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRI 728
Query: 487 PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVL 540
+K S ++ K R+ F NP + + L+ + +M E Y P T+Y L
Sbjct: 729 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYAL 788
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D ++ KE+AL HSE+LA+A G+IS+ +R+ KNLRVCGDCH K MS++ RE
Sbjct: 789 IDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRRE 848
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+++RD+ RFH FKDG CSC +W
Sbjct: 849 IVLRDSNRFHQFKDGHCSCRGFW 871
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ G++ D + ++F C + + + VH + +++ + N +++MY KC
Sbjct: 285 VQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKC 344
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A+ VF M+ RS+ S+ MI GYA GL E ++LFE+M + G+ P+ T AV
Sbjct: 345 GDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+ C ++E +H +++ G + L+ + KCG + EA+
Sbjct: 405 NCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAE 452
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A +EG EA++L ++ G+ D + C + + K+VH++ ++ +
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDM 428
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ ++N +++MY KCGSM +A VF M + + SW+ +I GY+ N +E L LF
Sbjct: 429 GFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNL 488
Query: 369 MR-KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
+ + P+E+T V AC S A ++ IH M++ + + LV + K
Sbjct: 489 LLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAK 546
Query: 427 CGHLFEAQQFIE 438
CG L A+ +
Sbjct: 547 CGALLLARLLFD 558
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M GV+ D+ F + + + + +++H Y L+S + N ++ Y K
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNH 244
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ AR+VFD M +R + SW+ +INGY NGL ++GL +F QM G++ + T ++VF+
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFA 304
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
C + I +H +K+ F S L+ + KCG L ++ + + +++
Sbjct: 305 GCADSRLISLGRAVHCFGVKACF--SREDRFCNTLLDMYSKCGDL-DSAKVVFREMSGRS 361
Query: 446 TAEFWEALRNYAR 458
+ + YAR
Sbjct: 362 VVSYTSMIAGYAR 374
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADAS--CFYTLFE 285
L V + + D+ + + L R C+ G +K A++L+ K D ++ +
Sbjct: 43 SLRTVSDRADSITTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQ 102
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
LC + K ++ K+V ++ + D L +K+ MY CG + +A RVFD +
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALF 162
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV---FSACGSADAIEEAFIHFE 402
W++++N A +G + LF++M G++ + TF V FS+ S + E+ +H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQ--LHGY 220
Query: 403 SMKSEFG 409
+KS FG
Sbjct: 221 ILKSGFG 227
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 218/402 (54%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAI---ELMD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A CQ EA+ +LM +G++ D + ++ + + E K +H + + +
Sbjct: 215 IAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGL 274
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+V+ N ++ MYGKCGS DAR VFD M ++++ SW+ M+ Y NG E L LF+
Sbjct: 275 DTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDS 334
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M G++PN+ TF+ + C + ++A HF M+ +FGI+P H+ L+ +LG+ G
Sbjct: 335 MDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSG 394
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
L EA++ I Q +P A W +L H D D A E +P A
Sbjct: 395 KLEEAEELI-QAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLS 453
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEF-RNPTLYRDDEKL----- 521
K++ +K+ S ++ ++ EF +++ D ++
Sbjct: 454 NLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQ 513
Query: 522 KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+ +++M+ Y PD + V+H +++E K++ L YHSE+LA+A+G+ STP RTPL I+KNLR
Sbjct: 514 RLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLR 573
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH+AIK +S + GR + VRD+ RFHHF G+CSCGDYW
Sbjct: 574 VCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
Query: 262 VKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
++EA++L+++ G L C K E +++H + T+ L+N +++
Sbjct: 25 IREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVD 84
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MYGKCGS+ +A+RVFD M +++ SW +++ G+ +G G E +QLF +M + G P+
Sbjct: 85 MYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVA 144
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L +CG+A A+ + IH S + G+ ++ + GKCG + EA
Sbjct: 145 LLKFIDSCGAAKALSQGREIH--SAAASCGMDSDLVTANAIINMYGKCGSIGEA 196
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 255 RLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
R+CQEG++ + + L+ + CG K +++H + DLV
Sbjct: 132 RMCQEGELPDRVALL------------KFIDSCGAAKALSQGREIHSAAASCGMDSDLVT 179
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +I MYGKCGS+ +A VF M ++++ SW MI + N L DE L F+ M++ G+
Sbjct: 180 ANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGM 239
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + T+++V A S A+E +H + + S + LV + GKCG
Sbjct: 240 ELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNT--LVNMYGKCG 292
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 220/431 (51%), Gaps = 40/431 (9%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEA----IELMDKGVKADASCFYT 282
+L++ + ++ P D V ++ D R G+ E + +M G+ + +
Sbjct: 211 GRLDDARSVFDRMPVRDVVSWTAMLD--RYFDAGRDGEGFRLFVRMMRSGILPNEFTYAG 268
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ C + K+VH +S + ++ MY K G M A RVF M
Sbjct: 269 VLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPD 328
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ SW MI+GYA NG DE L F+ + G +P+ TF+ V SAC A +++ F
Sbjct: 329 LVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFH 388
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S+K ++GI +HY ++ +L + G LFE + + +P +P W +L RIH +
Sbjct: 389 SIKDKYGIEHTADHYACVIDLLSRSG-LFERAEDMINTMPVKPNKFLWASLLGGCRIHKN 447
Query: 463 IDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD---GKSRLVEFRNPT------ 513
+ L A E + +++P +P T ++ + D R +E R T
Sbjct: 448 VRLAWWAAEALFEIEPE--NPATYVTLA-NIYASVGLFDEVENMRRTMELRGITKMPASS 504
Query: 514 -----------LYRDD-----EKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQAL 552
L D E++ AL +M+E YV DT +VLHD++ E K+Q +
Sbjct: 505 WIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDI 564
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
YHSERLA+A+G+I+TP +P+++ KNLR+CGDCH IK++S+IV RE+IVRD+ RFHHF
Sbjct: 565 GYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHF 624
Query: 613 KDGKCSCGDYW 623
K+G CSC DYW
Sbjct: 625 KNGSCSCRDYW 635
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H + ++ I D V+ + + +MY K G + DAR VFD M R + SW M++ Y D
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
G EG +LF +M + G+ PNE T+ V AC
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACA 274
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 214/387 (55%), Gaps = 37/387 (9%)
Query: 271 KGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+G+ AD + + C + + K +H++ + +R ++ + +I+MY KC
Sbjct: 179 RGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKC 238
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ + +VF+ + ++++ +W+++I+GYA NG GD LQ F +M +P+E TFL V
Sbjct: 239 GAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVL 298
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC + E F SMK +FG+ P EHY +V +LG+ G L EA + I Q + EP
Sbjct: 299 CACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELI-QSMSIEP 357
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT----------PPPKKRT 495
W AL R+HG+ L ++ + +++L+P+ + + + K R
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 496 AISI-----------LDGKSRLVEF-----RNP---TLYRDDEKLKALNQMKESTYVPDT 536
+S+ ++ + + EF R P +Y+ + L + ++KE+ YV T
Sbjct: 418 MMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNL--IKKLKENGYVTGT 475
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
L+DI++E KE +++YHSE+LA+A+GL+++P LRI+KNLR+C DCH K++S +
Sbjct: 476 DMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLV 535
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
R ++VRD RFHHF +G CSC DYW
Sbjct: 536 YKRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H +Q D+ + ++ +Y C S++DA ++FD M +R+ +W+ +I GY
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTH 167
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-----FIHFESMKSEFGI 410
N + + F M G QP+E+T + V SAC A + FI+ ++ +
Sbjct: 168 NRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLR--LNV 225
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYAR-IHGDIDLEDH 468
GT L+ + KCG ++E ++ E+ E W L YA GD L+
Sbjct: 226 FVGT----ALIDMYAKCGAVYEVEKVFEE--IREKNVYTWNVLISGYAMNGQGDAALQAF 279
Query: 469 AEELMVDLDPSKA 481
+ LM + P +
Sbjct: 280 SRMLMENFKPDEV 292
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 211/393 (53%), Gaps = 29/393 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNNK 317
+G I++ +G+K + + + C +P + ++ H ++ + + + +
Sbjct: 483 DGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSA 542
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MY + GS+ AR VF+ DR + SW+ MI+GYA +G E L F QM +G++ +
Sbjct: 543 LVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMD 602
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TFLAV C A ++E +F+SM + ISP EHY +V + + G L E I
Sbjct: 603 GATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLI 662
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDL-------------EDHAEELMVDLDPSKADP- 483
E +PF A W L R+H +++L +D A +++ + A
Sbjct: 663 E-GMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRW 721
Query: 484 -------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKES 530
K + + KK S + K+++ F +P + KLKA+ ++K+
Sbjct: 722 KERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQE 781
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y P+T VLHDI +E KE L+ HSERLA+A+GLI+TP RTPL+I+KNLRVCGDCH +
Sbjct: 782 GYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVM 841
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I RE+I+RD RFHHF G CSCGD+W
Sbjct: 842 KMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R ++ + +++MY KCG + D R VF+ M R++ +W ++ GY + + LF +
Sbjct: 132 RAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFR 191
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR G+ PN TF +V SA S A++ +H +S+K FG L+ + KC
Sbjct: 192 MRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVK--FGCRSTVFVCNSLINMYSKC 249
Query: 428 GHLFEAQQFIEQ 439
G + EA+ Q
Sbjct: 250 GLVEEAKAVFRQ 261
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K S + T+ +LC N K A+++H L+ D + +++ Y KCG + DA
Sbjct: 299 KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFN 358
Query: 334 VFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+F M +++ SW MI G N LF +MR+ ++PNE T+ V +A
Sbjct: 359 IFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA 413
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + + ++VH ++ R + + N +I MY KCG + +A+ VF M
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME 263
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
R M SW+ ++ G N E LQLF R + ++ T+ V C + + A
Sbjct: 264 TRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALAR- 322
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
S + G ++ KCG L +A I +P W A+
Sbjct: 323 QLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFN-IFLLMPGSQNVVSWTAMIGGCIQ 381
Query: 460 HGDIDL 465
+ DI L
Sbjct: 382 NADIPL 387
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++ Y K G+ +A +F + + + +W M++ Y+ G D +F +M G
Sbjct: 437 VGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQG 496
Query: 374 LQPNEQTFLAVFSACGSADA 393
++PNE T + AC S A
Sbjct: 497 MKPNEFTISSAIDACASPTA 516
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 215/394 (54%), Gaps = 34/394 (8%)
Query: 263 KEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS--TIRGDLVLNN 316
KEA+ L M + + F ++ C N + K VH Y ++ +++ + L
Sbjct: 344 KEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWT 403
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I+MY KCG + A+R+FD M +S+ +W+ MI+G+A +G D L LF +M G P
Sbjct: 404 SLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVP 463
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
++ TF+ V +AC A + +F SM ++ +SP HY ++ + G+ G LF+ +
Sbjct: 464 DDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAG-LFDEAET 522
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---------------- 480
+ + + +P W +L RIH I+L + + + +L+P
Sbjct: 523 LVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGR 582
Query: 481 -ADPKKIPTPP----PKKRTAISILDGKSRLVEFR--NPTLYRDDEKLKALNQ----MKE 529
D KI T KK S ++ S + EF + + +E K L++ +++
Sbjct: 583 WEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEK 642
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ +VPDT VL+D+D+E KE L +HSE+LAIA+GLIST T +RI+KNLRVCG+CH+A
Sbjct: 643 AGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSA 702
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I RE+I RD RFHHFKDG CSC DYW
Sbjct: 703 TKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVK 274
S+ + G+ L+ ++ P D V A ++ Q G+V+EA+ ++ +
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVV--SWNAMISGYAQSGRVEEAMAFFEEMRR 253
Query: 275 A----DASCFYTLFELCGNP-------KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
A + S ++ C W + + D L S IR L N +I+MY
Sbjct: 254 AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSW--IEDRGLGSNIR----LVNGLIDMYV 307
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG + +A +F+ + D+++ SW++MI GY E L LF +M + + PN+ TFL+
Sbjct: 308 KCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLS 367
Query: 384 VFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ AC + A++ ++H K+ + + L+ + KCG L A++ +
Sbjct: 368 ILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFD--CM 425
Query: 443 FEPTAEFWEALRNYARIHGDID 464
+ W A+ + +HG D
Sbjct: 426 NTKSLATWNAMISGFAMHGHTD 447
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 255 RLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
R EGK A ++ G++ +A +L + NA+ V D +S++R D V
Sbjct: 142 RGAHEGKQVHA-HVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFD---KSSMR-DAVS 196
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+I Y G + +AR +FD + R + SW+ MI+GYA +G +E + FE+MR+ +
Sbjct: 197 FTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKV 256
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PN T L+V SAC + + + S + G+ GL+ + KCG L EA
Sbjct: 257 TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEAS 316
Query: 435 QFIEQ 439
E+
Sbjct: 317 NLFEK 321
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 203/404 (50%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA+ L K VK++ + L C N +H + +S
Sbjct: 305 AVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKS 364
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ +++ N +I MY K G + A++VF M R + +W+ MI G++ +GLG + L +F
Sbjct: 365 GFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVF 424
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+ M PN TF V SACG ++E F + + +FG+ PG EHY +V +L K
Sbjct: 425 QDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSK 484
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--- 483
G L EA+ F+ P + W L N +H + L E ++++DP+
Sbjct: 485 TGQLNEARNFMRTA-PVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTL 543
Query: 484 -----------------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK 520
KKI P I + + ++P + +K
Sbjct: 544 LSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQK 603
Query: 521 LKALNQM-KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
+K L M K Y PD VLHD++ E KE L YHSE+LAIAYGL+ P+ + +IKN
Sbjct: 604 VKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKN 663
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR+C DCH+A++++S++ R ++VRD RFHHF+DG+CSC DYW
Sbjct: 664 LRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKW 292
N+ P D V S+ L+ L + G ++E +E++ + VK D F F LC + K
Sbjct: 192 NEVPVNDIVAYNSI--LSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKD 249
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
VH L S + D +++ +I MYGKCG AR VFD + R++ W ++
Sbjct: 250 LRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMAS 309
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEF 408
NG +E L LF +M + ++ NE T+ + +AC A + +H S KS F
Sbjct: 310 CFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGF 366
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQST--IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
L +L + K + K +H + + ++ ++ N +I Y K ++ A +FD M +
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEA 397
R++ SW ++ GY NG + ++L + M G + PNE S+C +EE
Sbjct: 95 RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEG 152
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + E ++ H L++ + N ++ MY KC + DA V++ + + ++
Sbjct: 143 CCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAY 202
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMK 405
+ +++ +NG EGL++ M ++ ++ TF+ FS C S + +H + +
Sbjct: 203 NSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLT 262
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
S+ ++ + GKCG A+
Sbjct: 263 SDVECDAYVSS--AIINMYGKCGKSLMAR 289
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 210/387 (54%), Gaps = 37/387 (9%)
Query: 271 KGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+G+ AD + + C + + K +H++ + +R ++ + +I+MY KC
Sbjct: 179 RGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKC 238
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ + +VF+ + ++++ +W+++I+GYA NG GD LQ F +M +P+E TFL V
Sbjct: 239 GAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVL 298
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC + E F SMK +FG+ P EHY +V +LG+ G L EA + I Q + EP
Sbjct: 299 CACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELI-QSMSIEP 357
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PPPKKRTAISILDG 502
W AL R+HG+ L ++ + +++L+P+ + + + ++ + L G
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 503 KSRL-----------VEFRNPT---------------LYRDDEKLKALNQMKESTYVPDT 536
L +E N +Y+ + L + ++KE+ YV T
Sbjct: 418 MMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNL--IKKLKENGYVTGT 475
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
L+DI++E KE +++YHSE+LA+A+GL+++P LRI+KNLR+C DCH K++S +
Sbjct: 476 DMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLV 535
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
R ++VRD RFHHF +G CSC DYW
Sbjct: 536 YKRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H +Q D+ + ++ +Y C S++DA ++FD M +R+ +W+ +I GY
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTH 167
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-----FIHFESMKSEFGI 410
N + + F M G QP+E+T + V SAC A + FI+ ++ +
Sbjct: 168 NRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLR--LNV 225
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYAR-IHGDIDLEDH 468
GT L+ + KCG ++E ++ E+ E W L YA GD L+
Sbjct: 226 FVGT----ALIDMYAKCGAVYEVEKVFEE--IREKNVYTWNVLISGYAMNGQGDAALQAF 279
Query: 469 AEELMVDLDPSKA 481
+ LM + P +
Sbjct: 280 SRMLMENFKPDEV 292
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 217/404 (53%), Gaps = 43/404 (10%)
Query: 260 GKVKEAIELM---------DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
GK KEA++L + V + T+ CG E K VH Y + +
Sbjct: 172 GKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEI 231
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D+VL +I+MY KCGS+ A+RVFD + + + + ++ MI A GL DE Q+F +M
Sbjct: 232 DIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEM 291
Query: 370 RKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ PN TF+ + AC I + +F+ M EFGI+P +HY +V + G+ G
Sbjct: 292 TTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSG 351
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
+ EA+ FI +P EP W +L + +R+ GDI + A + +++LDP +
Sbjct: 352 LIKEAESFIAS-MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLS 410
Query: 482 ----------DPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDE 519
+ K+I KK S ++ + + EF + +Y E
Sbjct: 411 NVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLE 470
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ + +++E+ YV DT+ VL D++++ KE AL YHSE+LAIA+ L+ T TP+RIIKN
Sbjct: 471 EI--MQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTPVRIIKN 528
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LR+CGDCH +K++S++ RE++VRD RFHHF DG CSC D+W
Sbjct: 529 LRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
++ CG+ +A ++ D ++ DL N V+ Y K G + AR++FD M +R+
Sbjct: 105 MYSSCGD---LSSALRIFD----ESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERN 157
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMR-----KLGLQPNEQTFLAVFSACGSADAIEEA 397
+ SW +INGY G E L LF +M+ ++ + PN+ T V SACG A+E+
Sbjct: 158 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQG 217
Query: 398 -FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++H S ++G+ L+ + KCG L A++ +
Sbjct: 218 KWVH--SYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFD 257
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 212/395 (53%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+++EA+ L + ++AD +L C + + +H Q + D+ L
Sbjct: 349 GRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLG 408
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + +A VF M+ R + +W MI G A NG+G L+ F M+ G Q
Sbjct: 409 TALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQ 468
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN T++A+ +AC + ++E ++FE M+ I P EHY ++ +LG+ G L EA
Sbjct: 469 PNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMD 528
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPK 484
+ + +P +P A W ++ + R+H D +L +A E ++ L+P + D +
Sbjct: 529 LV-RTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSR 587
Query: 485 KIPTPPPKKR-------------TAISILDGKSRLV--EFRNPTLYRDDEKLKALNQ-MK 528
+ +R ++I++ + + + +P + ++ + + +K
Sbjct: 588 QWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLK 647
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
Y P T + D+D+E KE ALL HSE++AIA+GLIS PL IIKNLRVC DCH+
Sbjct: 648 SVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHS 707
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
AIK++SRI RE+IVRD RFHHF+DG CSC D+W
Sbjct: 708 AIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y K G + AR +FD M DR + +++ +I GY G E L LF QMR+ L+
Sbjct: 308 NAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLR 367
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ T +++ +AC S A+ + +H E E I GT L+ + KCG + E
Sbjct: 368 ADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGT----ALLDMYLKCGRVEE 423
Query: 433 AQ 434
A
Sbjct: 424 AS 425
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 272 GVKADASCFYTLFELCGNPKWYEN-AKKVHDYFLQSTIRGDL-VLNNKVIEMYGKCGSMT 329
GV DA F+ LF+ C + + + +H ++ + + +++N +I MY + G
Sbjct: 98 GVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAG 157
Query: 330 DARRVFD-------------------------------HMADRSMDSWHLMINGYADNGL 358
DARR FD H R++ SW +I+GY+ G
Sbjct: 158 DARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGR 217
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHY 417
E + F M G++P+E T + + SAC D + +H + E G+ +
Sbjct: 218 AAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLH--KLVGEKGMLMSGKLV 275
Query: 418 LGLVGVLGKCGHLFEAQQFIE 438
+ L+ + KCG + A + +
Sbjct: 276 VALIDMYAKCGDIGRAWEVFD 296
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 205/387 (52%), Gaps = 32/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE+ +KA+ L C H Y L+ ++ + + +I+MY KC
Sbjct: 207 IEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKC 266
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A ++FD + R ++ MI G+A +G G + L LF++M GL P++ T +
Sbjct: 267 GCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTM 326
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+C +EE FESMK +G+ P EHY LV +LG+ G L EA++ + +P +P
Sbjct: 327 CSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERV-LNMPMKP 385
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPT 488
A W +L AR+HG++++ + + ++ L+P + D K++
Sbjct: 386 NAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRK 445
Query: 489 PPP----KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
K S+++ + EF R+ +Y E++ ++ E + P T
Sbjct: 446 LMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMS--RRLHEYGHKPRT 503
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VL DI++E KE AL YHSERLAIA+ LI++ P+RIIKNLRVCGDCH + K++S+I
Sbjct: 504 LEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKI 563
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFK+G CSC DYW
Sbjct: 564 YEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDY---FLQSTIRGDLVLNNKVIEMYGK 324
L +K + F +LF+ CG+ W + + +H + FL+ T D + ++ Y K
Sbjct: 99 LTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTC--DPFVQAALLNYYAK 156
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNG--------LGDEGLQLFEQMRKLGLQP 376
CG + R +F+ ++ + SW+ +++ Y N L E L LF +M+K ++
Sbjct: 157 CGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKA 216
Query: 377 NEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEA 433
NE T +A+ SAC A+ + A+ H +K ++ H++G L+ + KCG L A
Sbjct: 217 NEVTLVALISACAELGALSQGAWAHVYVLKHNLKLN----HFVGTALIDMYSKCGCLDLA 272
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
Q +Q LP T + + +A IHG
Sbjct: 273 CQLFDQ-LPHRDTLCYNAMIGGFA-IHG 298
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 205/388 (52%), Gaps = 34/388 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ ++ G++ + + + C + K+VH +S + ++ MY K
Sbjct: 252 VRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKY 311
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G M A RVF M + SW MI+GYA NG DE L+ F+ + + G +P+ TF+ V
Sbjct: 312 GDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVL 371
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A +++ F S+K E+GI +HY ++ +L + G LFE + + + +P
Sbjct: 372 SACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSG-LFERAEEMINTMSVKP 430
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD---G 502
W +L RIH ++ L A E + +++P +P T ++ + D
Sbjct: 431 NKFLWASLLGGCRIHKNVRLARWAAEALFEIEPE--NPATYVTLA-NIYASVGLFDEVEN 487
Query: 503 KSRLVEFRNPT----------------------LYRDDEKLKAL-----NQMKESTYVPD 535
R++E + T L+ E++ AL +M+E YV D
Sbjct: 488 TRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVAD 547
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T +VLHD++ E K+Q + YHSERLA+A+G+I+TP P+++ KNLR+CGDCH IK++S+
Sbjct: 548 TGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISK 607
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IV RE+IVRD+ RFHHFK+G CSC DYW
Sbjct: 608 IVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H + ++ I D V+ + + +MY KCG + DAR VFD M R + SW M+ Y D
Sbjct: 182 RELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDA 241
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
EG +LF +M + G+QPNE T+ V AC
Sbjct: 242 RRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACA 274
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 217/397 (54%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ + +GVK + ++ C + + H Y ++ I+ +
Sbjct: 217 QVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVR 276
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++++Y KCG M A VF M ++++ +W +NG A NG G++ L+LF M++ G
Sbjct: 277 LATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG 336
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN TF++V C ++E HF+SM++EFGI P EHY LV + + G L +A
Sbjct: 337 VTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDA 396
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------AD 482
I+Q +P +P A W +L + +R++ +++L A + M++L+ + AD
Sbjct: 397 VSIIQQ-MPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYAD 455
Query: 483 P----------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ- 526
+ + + +K+ S+++ + EF +P + D K +++
Sbjct: 456 SNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRR 515
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
++ + Y DT V+ DID+E KE AL HSE+ AIA+G++S P+RI+KNLRVCGDC
Sbjct: 516 LRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDC 575
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H ++S+I RE+IVRD RFHHFKDG CSC +W
Sbjct: 576 HQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V ++ +CG + AR++F+ M +R +W+ MI+GYA G E L +F M+
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEE---AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G++ N ++V SAC A+++ A + E K + + T LV + KC
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATT----LVDLYAKC 288
Query: 428 GHLFEAQQ 435
G + +A +
Sbjct: 289 GDMEKAME 296
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 205/387 (52%), Gaps = 32/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE+ +KA+ L C H Y L+ ++ + + +I+MY KC
Sbjct: 139 IEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKC 198
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A ++FD + R ++ MI G+A +G G + L LF++M GL P++ T +
Sbjct: 199 GCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTM 258
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+C +EE FESMK +G+ P EHY LV +LG+ G L EA++ + +P +P
Sbjct: 259 CSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERV-LNMPMKP 317
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPT 488
A W +L AR+HG++++ + + ++ L+P + D K++
Sbjct: 318 NAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRK 377
Query: 489 PPP----KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
K S+++ + EF R+ +Y E++ ++ E + P T
Sbjct: 378 LMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMS--RRLHEYGHKPRT 435
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VL DI++E KE AL YHSERLAIA+ LI++ P+RIIKNLRVCGDCH + K++S+I
Sbjct: 436 LEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKI 495
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFK+G CSC DYW
Sbjct: 496 YEREIIVRDRNRFHHFKEGACSCSDYW 522
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPG 413
D L L LF +M+K ++ NE T +A+ SAC A+ + A+ H +K ++
Sbjct: 127 DIFLIKSVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLN-- 184
Query: 414 TEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
H++G L+ + KCG L A Q +Q LP T + + +A IHG
Sbjct: 185 --HFVGTALIDMYSKCGCLDLACQLFDQ-LPHRDTLCYNAMIGGFA-IHG 230
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 215/397 (54%), Gaps = 31/397 (7%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+E+ +K G + D++ F ++ C + +H+ + + IR ++V
Sbjct: 186 QNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVV 245
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++ M+ +CG + AR VFD M + ++ SW MI+GY +G G E +++F +M+ G
Sbjct: 246 LATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACG 305
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN T++AV SAC A I E + F SMK E+G+ PG EH++ +V + G+ G L EA
Sbjct: 306 VVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEA 365
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
QF+ E W A+ ++H + DL E ++ +P
Sbjct: 366 YQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYAL 425
Query: 480 -------KADPKKIPTPPPKKRTAISILDGKSR--LVEFRNPTLYRDDEKLKALNQM--- 527
++ + KK+ S +D ++R L + + +E L+++
Sbjct: 426 AGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWR 485
Query: 528 -KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
K++ Y P +H++++E +E AL YHSE+LA+A+GL+ T LRI+KNLR+C DC
Sbjct: 486 CKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDC 545
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK +S ++ RE+IVRD RFHHF++G CSC DYW
Sbjct: 546 HSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 6/228 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + VH + S + + ++ Y K + AR+VFD M
Sbjct: 111 FTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMP 170
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
RS+ +W+ MI+GY NGL E +++F +MR+ G +P+ TF++V SAC +++
Sbjct: 171 QRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCW 230
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
E + GI LV + +CG + A+ + E W A+ + +
Sbjct: 231 LHECIVGT-GIRMNVVLATSLVNMFSRCGDVGRARAVFDSM--NEGNVVSWTAMISGYGM 287
Query: 460 HGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLV 507
HG A E+ + P ++ A + L + RLV
Sbjct: 288 HG---YGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLV 332
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 208/390 (53%), Gaps = 31/390 (7%)
Query: 264 EAIELMDKGV---KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
EA+ L V K D + + C + + K+VH + L++ D + N +++
Sbjct: 183 EALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG AR +FD + + + +W +MI GY +G G+ + F +MR+ G++P+E +
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
F+++ AC + ++E + F M+ E + P EHY +V +L + G L A +FI +
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI-KS 361
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS--------------------- 479
+P EP A W AL + RIH D+ L + E + +L+P
Sbjct: 362 MPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEV 421
Query: 480 KADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYV 533
K +KI KK S ++ KS++ F +P + + LK L ++MKE Y
Sbjct: 422 KKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYF 481
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
P TRY L + D KE AL HSE+LA+A+G+++ P +R+ KNLRVCGDCH K +
Sbjct: 482 PKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFI 541
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S+ +GRE+++RD+ RFHHFKDG C C +W
Sbjct: 542 SKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 253 LARLCQEGKVKEAIEL---MDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A +EG EAI L MD+ GV D T+ C EN K VH+Y ++ +
Sbjct: 71 IAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDM 130
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++ + N +++MY KCGSM DA VF M + + SW+ MI GY+ N L +E L LF
Sbjct: 131 QSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGD 190
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIE 395
M L ++P+ T + AC S +++
Sbjct: 191 M-VLEMKPDGTTLACILPACASLASLD 216
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 35/277 (12%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + C N + VH +++ + N +++MY KCG + A VFD M+ R
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA---- 397
++ +W +I YA GL DE ++LF +M + G+ P+ T V AC ++E
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 398 -FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ-FIEQKLPFEPTAEFWEALRN 455
+I M+S + L+ + KCG + +A F+E +P + + +
Sbjct: 123 NYIRENDMQSNIFVCN------ALMDMYAKCGSMEDANSVFLE--MPVKDIISWNTMIGG 174
Query: 456 YAR---------IHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
Y++ + GD+ LE K D + P + S+ GK
Sbjct: 175 YSKNSLPNEALSLFGDMVLE------------MKPDGTTLACILPACASLASLDRGKEVH 222
Query: 507 VEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
+ D + AL M VP +L D+
Sbjct: 223 GHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDM 259
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 211/396 (53%), Gaps = 33/396 (8%)
Query: 260 GKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+EL + GV+ D+ ++ + + K++H + ++ + L
Sbjct: 599 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 658
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ +++MY +CG++ +R VF+ + ++ + W MIN Y +G G + LF +M +
Sbjct: 659 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ F+AV AC + + E ESMK E+ + P EHY+ LV +LG+ HL EA Q
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQ 778
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------------KADP 483
F+ + + EPTAE W AL +IH + +L + A + ++++DP A+
Sbjct: 779 FV-KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAER 837
Query: 484 K---------KIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ--M 527
+ ++ KK S ++ +++ F +P Y KL + +
Sbjct: 838 RWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLA 897
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
KE YV T++VLH+ +E K Q L HSERLAIAYG+++TP LRI KNLRVCGDCH
Sbjct: 898 KEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCH 957
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
N K++S+ REL++RD RFHHFK G CSCGD W
Sbjct: 958 NFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 247 PPSVADLARLCQEGKVKEAIE-LMDKGVKADASCFY------TLFELCGNPKWYENAKKV 299
P L +C+ G V EA + L D S F ++ ELCG+ K ++V
Sbjct: 77 PVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQV 136
Query: 300 HDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
H + + S + + L+ +++ MYGKCG + DA ++FD M +++ +W+ MI Y NG
Sbjct: 137 HAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGE 196
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHY 417
L+L+ +MR G+ + TF + ACG D A +H ++K + +
Sbjct: 197 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVAN- 255
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+VG+ KC L A+Q + ++P + W ++
Sbjct: 256 -SIVGMYTKCNDLNGARQLFD-RMPEKEDVVSWNSM 289
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 195 PRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPNQ------LNNVPNNMNQCPAGDQVLPP 248
RS N N Q Y + G+ + + + + ++ P D V
Sbjct: 430 ARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWT 489
Query: 249 SVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
++ +A Q G A+EL + G+ D ++ C K + K++H Y +
Sbjct: 490 TI--IAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYII 547
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ + DLVL N ++++YG+CG++ A R+F+ + + + SW MI+ Y NGL +E L+
Sbjct: 548 RKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALE 606
Query: 365 LFEQMRKLGLQPNEQTFLAV 384
LF M++ G++P+ + +++
Sbjct: 607 LFHLMKETGVEPDSISLVSI 626
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ Q G EA+ E+ D G K D ++ N ++H Y +++ +
Sbjct: 391 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGL 450
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL + N +++MY K SM +FD M D+ + SW +I G+A NG L+LF +
Sbjct: 451 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 510
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL---GLVGVL 424
++ G+ + ++ AC I IH + I G + G+V V
Sbjct: 511 VQLEGIDLDVMMISSILLACSGLKLISSVKEIH------SYIIRKGLSDLVLQNGIVDVY 564
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+CG++ A + E + F+ + + Y +H L + A EL + + +P
Sbjct: 565 GECGNVDYAARMFEL-IEFKDVVSWTSMISCY--VHN--GLANEALELFHLMKETGVEPD 619
Query: 485 KI 486
I
Sbjct: 620 SI 621
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 207 QGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI 266
+GY + + N LN ++ P + V+ + + ++ G+ EA+
Sbjct: 245 EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN-SMISAYSSNGQSIEAL 303
Query: 267 ELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
L + KA + F + C + + + +H L+S+ ++ + N +I MY
Sbjct: 304 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 363
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
+ G M +A +F +M D SW+ M++G+ NGL E LQ + +MR G +P+ +
Sbjct: 364 ARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 423
Query: 383 AVFSACG-SADAIEEAFIHFESMK 405
++ +A S + + IH +MK
Sbjct: 424 SIIAASARSGNTLNGMQIHAYAMK 447
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 200/383 (52%), Gaps = 40/383 (10%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-RGDLVLNNKVIEMYGKCGSMTDARRV 334
D F C N K+ H ++S I + +NN ++ MY KCG++ DAR++
Sbjct: 343 DDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKL 402
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F M + + + +I GYA +G+G E L LFEQM + P T +++ SAC +
Sbjct: 403 FQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRV 462
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
EE +F MK FGI P EHY ++ +LG+ G L EA++ I+ +PF P + W AL
Sbjct: 463 EEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDT-MPFSPGSAAWAALL 521
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKK 493
R +G+++L + A + L+P+ A P K + +K
Sbjct: 522 GACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRK 581
Query: 494 RTAISILDGKSRLVEF----------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
+ S ++ R+ F + +Y D+ +K MK + YVPD R+
Sbjct: 582 KPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVK----MKRAGYVPDVRWAFVKD 637
Query: 544 DQ---EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D+ + KE L +HSE+LA+A+GL+ T PL ++KNLR+CGDCHNAIK MS I R+
Sbjct: 638 DETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRK 697
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+ VRD RFH F+DG+CSCGDYW
Sbjct: 698 ITVRDAYRFHCFEDGRCSCGDYW 720
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 314 LNNKVIEMYGKCGS-MTDARRVFDHMADRSMDSWHLMINGYADNG-LGDEGLQLFEQMRK 371
+ + +I+MY KCG+ M+++R+VF+ + + W+ MI+GY+ N L E L+ F QM++
Sbjct: 278 VGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQR 337
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCG 428
G P++ +F+ SAC + + + H +MKSE P + + LV + KCG
Sbjct: 338 AGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEI---PSNQISVNNALVTMYSKCG 394
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+L +A++ Q++P T + YA+ HG
Sbjct: 395 NLQDARKLF-QRMPQHNTVTLNSIIAGYAQ-HG 425
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD--- 336
F + + C K K +H +L+S I L+N I +Y KC +T A F+
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70
Query: 337 --------------------HMADRSMD--------SWHLMINGYADNGLGDEGLQLFEQ 368
H+A D S++ +IN YAD G L LF +
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
MR++GL + TF V +AC
Sbjct: 131 MREMGLVMDGFTFSGVITAC 150
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ + G+ D F + C N +++H S + + N ++ Y K G
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGL--IRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187
Query: 327 SMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
+ +A VF+ M + D SW+ MI Y + G + L L+ M G + + T +V
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ + + H +++K+ G + GL+ + KCG
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKT--GFNKNRHVGSGLIDMYAKCG 290
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 217/410 (52%), Gaps = 44/410 (10%)
Query: 251 ADLARLCQEGKVKEAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A +A Q G+ +EA+ L MD GVK + ++ C + + K H Y +
Sbjct: 212 AMIAGYAQRGQSREALNLFKLMQMD-GVKVNEVSMISVVTACTHLGALDQGKWAHAYIEK 270
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ I+ + L +++MY KCG++ A +VF M ++++ +W I G A NG G + L+L
Sbjct: 271 NKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLEL 330
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F M+ G+ PNE TF++V C ++E HF+SMK + GI P EHY +V + G
Sbjct: 331 FSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYG 390
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----- 480
+ G L EA FI +P +P A W AL N R++ +++L + A +++++
Sbjct: 391 RAGRLEEALNFI-NTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYV 449
Query: 481 ------ADP----------KKIPTPPPKKRTAISILDGKSRLVEFRN-----------PT 513
AD + + K S+++ + EF + T
Sbjct: 450 SLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIET 509
Query: 514 LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 573
++ + K ++K + YV T VL DI++E KE AL HSE++AIA+GL S P
Sbjct: 510 MWGEISK-----RLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLP 564
Query: 574 LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+RI+KNLR+C DCH+ K++S+I RE+IVRD RFHHFKDG+CSC D+W
Sbjct: 565 IRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+S + DLV ++ KCG + AR +FD M R SW+ MI GYA G E L
Sbjct: 168 FESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREAL 227
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGISPGTEHYLGL 420
LF+ M+ G++ NE + ++V +AC G+ D + A + E K + ++ GT L
Sbjct: 228 NLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGT----AL 283
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA----LRNYARIHGDIDLEDHAEELMVDL 476
V + KCG++ A + FWE + ++ G + + + ++ +
Sbjct: 284 VDMYFKCGNVDRALKV------------FWEMNEKNVYTWSTAIGGLAMNGYGQKCLELF 331
Query: 477 DPSKADPKKIPTPPPKKRTAISILDGKS 504
K + P + T IS+L G S
Sbjct: 332 SFMKHEG-----IAPNEITFISVLKGCS 354
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 222/411 (54%), Gaps = 40/411 (9%)
Query: 248 PSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P A +A Q G ++AI L D + ++ ++ + + C + + K+VH
Sbjct: 33 PWNAMIAAYVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAALRDGKRVHAIA 92
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+ ++ + +++MY KCG + +A F + SW M+ +A +G D L
Sbjct: 93 RDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRAL 152
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
F++M++ G +PN TF+ + SAC +EE +F+ M + +GI+P +HY +V +
Sbjct: 153 ATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDL 212
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
LG+ G+L EA+ F+ ++P P A ++L + R + D+D + + M++ ++ P
Sbjct: 213 LGRAGYLDEAEDFL-NRMPGAPHAAVLKSLLSACRSYKDVDRGERIAKRMLESFWDESMP 271
Query: 484 KKIPTP----------PPKKRTAI-----------SILDGKSRLVEF---------RNPT 513
+ + R+ + S ++ + R+ EF NP
Sbjct: 272 YVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEVEGRVFEFVAGDMSHVQMNPI 331
Query: 514 LYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART 572
KL+ L+ MKE+ YVPDT VLHD+ +E KEQ LL+HSE+LA+A+GL++TPA +
Sbjct: 332 ----RAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGS 387
Query: 573 PLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R+IKNLRVC DCH+A K++S I R ++ RD RFHHF++G CSCGDYW
Sbjct: 388 PIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFENGVCSCGDYW 438
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
V+ + K G++ A R+F DRS + W+ MI Y +G + ++LF+++ ++P
Sbjct: 6 VLSAFAKVGNLHLAARIFAR-TDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIEP 64
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N T + V AC S A+ + ++ + G+ +V + KCG L EA +
Sbjct: 65 NSVTLMEVLDACASLAALRDG-KRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEA 123
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDID 464
++ T + L +A+ HG ID
Sbjct: 124 F-ARIERHDTVSWTAMLAAFAQ-HGHID 149
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 208/365 (56%), Gaps = 42/365 (11%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ + D+ + + +++MY KCG + +RRVF+ M ++++ +W+++I
Sbjct: 337 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 396
Query: 356 NGLGDEGLQLFEQM-----RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
+G G+E L+LF+ M R +PNE TF+ VF+AC + I E F MK + G+
Sbjct: 397 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 456
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF-----WEALRNYARIHGDIDL 465
P ++HY +V +LG+ G L EA + + +P AEF W +L RIH +++L
Sbjct: 457 EPTSDHYACVVDLLGRAGQLEEAYELV-NTMP----AEFDKVGAWSSLLGACRIHQNVEL 511
Query: 466 EDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAISILDGKS 504
+ A + ++ L+P+ A K + KK S ++ +
Sbjct: 512 GEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 571
Query: 505 RLVEFRNPTL-YRDDEKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSER 558
+ +F + + E+L +M++ YVPDT VLH++D++ KE L HSE+
Sbjct: 572 EVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEK 631
Query: 559 LAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
LAIA+G+++TP T +R+ KNLRVC DCH A K +S+I+ RE+IVRD +RFHHFK+G CS
Sbjct: 632 LAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCS 691
Query: 619 CGDYW 623
CGDYW
Sbjct: 692 CGDYW 696
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 20/191 (10%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ Q + EA+ ++ +GV+ D ++ C + + + K++H Y L++
Sbjct: 186 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN- 244
Query: 309 RGDLVLNNKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
DL+ N+ V ++MY C + RRVFDH+ R ++ W+ MI+GYA NGL ++ L
Sbjct: 245 --DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 302
Query: 365 LFEQMRKL-GLQPNEQTFLAVFSACG-SADAIEEAF-IHFESMKSEFG--ISPGTEHYLG 419
LF +M K+ GL PN T +V AC S AI + IH ++++ I+ G+
Sbjct: 303 LFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGS----A 358
Query: 420 LVGVLGKCGHL 430
LV + KCG L
Sbjct: 359 LVDMYAKCGCL 369
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
NN ++ MY K G + D++ +F+ DR M SW+ MI+ ++ + E L F M G+
Sbjct: 151 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 210
Query: 375 QPNEQTFLAVFSAC 388
+ + T +V AC
Sbjct: 211 ELDGVTIASVLPAC 224
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 220/401 (54%), Gaps = 37/401 (9%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTI---RG 310
+ G+ EA+ + D+ ++ D ++ + C + E + VH Y + RG
Sbjct: 188 RAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRG 247
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L+L +++MY KCG M DA +VFD + R + W+ MI G A NG G+ L+LF +M
Sbjct: 248 NLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRML 307
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ G PNE TF+AV AC ++E F+SM+ ++GI P EHY L +LG+ G++
Sbjct: 308 QKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQ-DYGIKPQREHYGCLADLLGRAGNV 366
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------ 478
EA+ + +P EP A W AL + ++H DI++ + + +++L+P
Sbjct: 367 EEAEALL-LDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNL 425
Query: 479 ---------SKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL 524
++ + + KK T +S ++ + EF R+P + L+ +
Sbjct: 426 YAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDI 485
Query: 525 -NQMKESTYVPDTRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+++ YV DT V+ D+D +E K AL YHSERLA+A+G+++ P P+RI+KNLRV
Sbjct: 486 ERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPIRIVKNLRV 545
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH K++S++ RE+IVRD RFH F+DG CSC DYW
Sbjct: 546 CRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V N ++ YGK G + AR VF M +R++ SW M++ G E L +F++M
Sbjct: 144 DVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMM 203
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHY-LGLVGVLGKCG 428
+ +P+ ++V AC A+E ++H FG G LV + KCG
Sbjct: 204 REEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCG 263
Query: 429 HLFEAQQFIE 438
+ +A Q +
Sbjct: 264 CMEDAWQVFD 273
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 205/384 (53%), Gaps = 29/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ D G K D + +C E AK+ H ++ D+V N +++ Y K G
Sbjct: 309 EMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWG 368
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M DA VF+ M +++ SW+ +I GY ++G G+E +++FEQM + G+ PN TFLAV S
Sbjct: 369 RMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLS 428
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + E + F SM + + P HY +V +LG+ G L EA + I PF+PT
Sbjct: 429 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSA-PFKPT 487
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------DPKKIPTPP----P 491
W L R+H +++L A E + ++P K K+
Sbjct: 488 TNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQT 547
Query: 492 KKRTAISILDGKSRLVEFRNPTLYRDDEKL---------KALNQMKEST---YVPDTRYV 539
KR + +L + + + + +K K N M E + YV + + +
Sbjct: 548 LKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKAL 607
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
L D+D+E +++ L YHSE+LAIA+GLI+TP TPL+I + RVCGDCH+AIK ++ + GR
Sbjct: 608 LPDVDEE-EQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGR 666
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFHHF+DG CSCGDYW
Sbjct: 667 EIVVRDASRFHHFRDGSCSCGDYW 690
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 5/199 (2%)
Query: 264 EAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
E +EL G S + L C + K+V +Y + S DL + N+V+ ++
Sbjct: 104 EILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHV 163
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG M DAR++FD M ++ M SW MI G+ D+G E LF M + +TF
Sbjct: 164 KCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTT 223
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ A ++ IH ++K G+ T L+ + KCG + +A +Q +P
Sbjct: 224 MIRASAGLGLVQVGRQIHSCALKR--GVGDDTFVSCALIDMYSKCGSIEDAHCVFDQ-MP 280
Query: 443 FEPTAEFWEALRNYARIHG 461
E T W ++ +HG
Sbjct: 281 -EKTTVGWNSIIASYALHG 298
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ + +++H L+ + D ++ +I+MY KCGS+ DA VFD M
Sbjct: 221 FTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMP 280
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+++ W+ +I YA +G +E L + +MR G + + T V C ++E A
Sbjct: 281 EKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYA 338
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 212/392 (54%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK ++ +G+K + + C + EN +++H +++ GD+ + + +
Sbjct: 336 EKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSAL 395
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+++YGKCG M A +F + R + SW+ +I+GY+ +G G++ L+ F M G+ P+E
Sbjct: 396 VDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDE 455
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V SAC +EE F+SM +GI+P EHY +V +LG+ G E + FIE
Sbjct: 456 ATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIE 515
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKA--- 481
+ + P + WE + ++HG++D + A + + +++P SK
Sbjct: 516 E-MNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWD 574
Query: 482 DPKKI----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQMKEST- 531
D + I + KK S ++ ++ F +P + KL L Q S
Sbjct: 575 DVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIG 634
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVP T VLH++ + K + L YHSERLA+++ L+ST A P+RI KNLR+C DCH+ +K
Sbjct: 635 YVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMK 694
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S I +E++VRD +RFHHFK G CSC D W
Sbjct: 695 LISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ +G K + F ++ C + E K+VH + ++++ D + +++MY K
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA FD + +R + SW ++I+GYA ++ ++ F QM++ G++PNE T + S
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 387 ACGSADAIEEAF-IHFESMKS-EFG-ISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
C +E +H ++K+ FG I G+ LV + GKCG + A+ +
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGS----ALVDLYGKCGCMEHAEAIFK 413
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
T+ + C N K +H L+S D L +++MY KCG++ DA +VF + +
Sbjct: 56 TVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNP 115
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +W MI G G G E +LF MR+ G +PN+ T ++ S
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVST 161
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 251 ADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q+G +EA EL KG + + +L N + +H +
Sbjct: 122 AMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKY 181
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D +++N +I MY K + D +VF+ M + + SW+ +++G+ D+ G ++F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 367 EQMRKLGLQPNEQTFLAVFSACGS 390
QM G +PN TF++V +C S
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSS 265
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M A R+F M +++ SW+ ++NGYA G G + L+LF +M++ + ++ T V
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFE 444
C + ++ E +H +++S I + +LG LV + KCG +++A + +
Sbjct: 61 CANTGSLREGKVLHALALRSGCEI----DEFLGCSLVDMYSKCGTVYDALKVFTK--IRN 114
Query: 445 PTAEFWEAL 453
P W A+
Sbjct: 115 PDVVAWSAM 123
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 209/402 (51%), Gaps = 34/402 (8%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G AIEL D G ++ ++ C E ++VH + L+
Sbjct: 241 IAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYD- 299
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL+L+N +++MY KCGS+ DA +F M R + SW M++G A NG E L++F+
Sbjct: 300 -RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDL 358
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M+ G+ PN T + V AC A +E+ + +F SMK FGI P EH+ +V +LG+ G
Sbjct: 359 MKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAG 418
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L EA +FI + EP + W L R+H + L +A ++ L+P
Sbjct: 419 KLDEAVEFI-HGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLS 477
Query: 479 -SKADP----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR--DDEKLKALN 525
+ AD K + +K S ++ + R+ F L D ++ LN
Sbjct: 478 NTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELN 537
Query: 526 QM----KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
++ K YVP T +VL D+ E KE L YHSE++AI +G + P+RI+KNLR
Sbjct: 538 RLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLR 597
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH K++S+ GR +++RD RFHHF+DG CSCGDYW
Sbjct: 598 ICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 250 VADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA LA +G+ +EA+ + GV +A F ++ C P VH ++
Sbjct: 142 VAALA--SADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGML---TAVHASTVK 196
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + D+ + + +I+ Y K G + RRVFD M R + W+ +I G+A +G G ++L
Sbjct: 197 AGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIEL 256
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVL 424
F +M+ G N+ T +V AC +E +H +K + + + L+ +
Sbjct: 257 FMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLIL----HNALLDMY 312
Query: 425 GKCGHLFEAQQFIEQ 439
KCG L +A +
Sbjct: 313 CKCGSLEDADALFHR 327
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 248 PSVADLARLCQEG----KVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
PS+ +RLC EG + EL G++AD L +LC ++ + +H +
Sbjct: 31 PSLTTFSRLCVEGPLPAALALLSELAAAGLRADPVSLTRLVKLCVRHGTADHGRLIHRHV 90
Query: 304 -----LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD-NG 357
L G L ++N + MY K G + DA R+FD M R++ +W ++ A +G
Sbjct: 91 EAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADG 150
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
E L+ MR+ G+ PN TF +V AC + + +H ++K+
Sbjct: 151 RKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA--VHASTVKA 197
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 215/399 (53%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + +EA++L + KA+ ++ C E K VH + + ++ +
Sbjct: 303 QASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVT 362
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++ Y KCGS+ + VF M +++ SW ++I G A NG G + L+ F M +
Sbjct: 363 LGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKN 422
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ TF+ V SAC A ++E F SM +FGI P EHY +V +LG+ G + EA
Sbjct: 423 VEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA 482
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
QFI + +P +P A W L ++H ++++ + + + ++ L+P+ +
Sbjct: 483 FQFI-KNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYAS 541
Query: 482 -----DPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
D K+ KK S+++ + EF ++ +Y E + +
Sbjct: 542 VGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDM--M 599
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
Q+K + YVP+T D +++ KE ++ +HSE+LAIA+GLI +P T +RI KNLRVC
Sbjct: 600 KQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCT 659
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHNA K++S++ RE++VRD RFHHFK+G CSC DYW
Sbjct: 660 DCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E VK E+++ ++ D ++ CG E + ++ Y + ++G+ L +
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY KCG + ARR+FD M R + +W MI+GY+ E L LF +M+K + PNE
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326
Query: 379 QTFLAVFSACGSADAIEEA-FIHF--ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
T +++ S+C A+E ++HF + + + ++ GT L+ KCG + E+
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT----ALMDFYAKCGSV-ESSI 381
Query: 436 FIEQKLPFEPTAEFWEAL 453
+ K+P + W L
Sbjct: 382 EVFGKMPVKNVLS-WTVL 398
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ + V+ D F + ++C + +++H ++ + N +I MY CG
Sbjct: 114 EMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCG 173
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ ARRVFD M++R++ +W+ M GY +G +E ++LF +M +L ++ +E T ++V +
Sbjct: 174 EVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLT 233
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
ACG +E E G+ LV + KCG + A++ +Q
Sbjct: 234 ACGRLADLELGE-WINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQ 285
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM A +F + + ++++MI G+ E + LF++M + +QP+E TF +
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C A+ E IH MK FG ++ L+ + CG + A++ ++
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKN--TLIHMYANCGEVEVARRVFDE 184
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 228/442 (51%), Gaps = 36/442 (8%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL-----M 269
++ + G+ I +N P D V ++ ++ Q GK EA+ + +
Sbjct: 302 TWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNAL--ISAYEQNGKPNEALLVFHELQL 359
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
K +K + + C E + +H Y ++ I+ + + + +I MY KCG +
Sbjct: 360 QKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLE 419
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
AR VF+ + R + W MI G A +G G E + +F +M++ ++PN TF VF AC
Sbjct: 420 KAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS 479
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
++EA F M+S +GI P +HY +V VLG+ G+L +A +FIE +P P+
Sbjct: 480 HTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEA-MPIPPSTSV 538
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDP----------------SKAD-----PKKIPT 488
W AL +IH ++ L + A +++L+P K D K +
Sbjct: 539 WGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRV 598
Query: 489 PPPKKRTAISILDGKSRLVEFRN-----PTLYRDDEKL-KALNQMKESTYVPDTRYVLHD 542
KK S ++ + EF + P + KL + + ++K + Y P+ +VL
Sbjct: 599 TGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQI 658
Query: 543 IDQE-AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
I++E KEQ+L HSE+LAI YGLIST A +R+IKNLR+CGDCH K++S++ RE+
Sbjct: 659 IEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREI 718
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
IVRD RFHHF++G+CSC D+W
Sbjct: 719 IVRDRYRFHHFRNGQCSCNDFW 740
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 55/248 (22%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G +A+EL K VKA + C + E ++V Y ++ + +L
Sbjct: 211 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLT 270
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA------------------- 354
L N +++MY KCGS+ DA+R+FD M ++ +W M++GYA
Sbjct: 271 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKD 330
Query: 355 ------------DNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIE-----E 396
NG +E L +F +++ + ++ N+ T ++ SAC A+E
Sbjct: 331 IVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIH 390
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLPFEPTAEFWEAL 453
++I +K F ++ L+ + KCG L +A++ +E++ F W A+
Sbjct: 391 SYIKKNGIKMNFYVTS------ALIHMYSKCGDLEKAREVFNSVEKRDVF-----VWSAM 439
Query: 454 RNYARIHG 461
+HG
Sbjct: 440 IGGLAMHG 447
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++S + D+ + N +I Y CG + A +VF + ++ + SW+ MING+ G
Sbjct: 155 LHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 214
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
D+ L+LF++M ++ + T + V SAC +E
Sbjct: 215 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 204/359 (56%), Gaps = 32/359 (8%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+N +++H +Q L + N +I MY +CG + A VF M SW+ MI
Sbjct: 427 DNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAAL 486
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A +G G + +QL+E+M K + P+ TFL + SAC A ++E +F++M+ +GI+P
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPE 546
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+HY L+ +L + G EA+ + + +PFEP A WEAL IHG+++L A + +
Sbjct: 547 EDHYSRLIDLLCRAGMFSEAKN-VTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRL 605
Query: 474 VDLDPSK--------------------ADPKKIPTP-PPKKRTAISILDGKSRLVEF--- 509
++L P + A +K+ KK S ++ ++ + F
Sbjct: 606 LELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVD 665
Query: 510 -----RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
+YR E+L +++M++ YVPDT++VLHD++ E KE AL HSE+LA+ YG
Sbjct: 666 DAVHPEVHAVYRYLEQL--VHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYG 723
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ P +R+ KNLR+CGDCHNA K +S++V RE+IVRD KRFHHF++G+CSC +YW
Sbjct: 724 IMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 48/244 (19%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR--GDLV 313
G +EA +L+ + G++ D + ++ N + ++VH Y L++ ++ G V
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV 312
Query: 314 L--NNKVIEMYGKCGSMTDARRVFD-------------------------------HMAD 340
L NN +I +Y +CG + +ARRVFD M
Sbjct: 313 LSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPV 372
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEA 397
RS+ +W +MI+G A NG G+EGL+LF QM+ GL+P + + ++C GS D ++
Sbjct: 373 RSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQL 432
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
+ + +S G L+ + +CG L EA + +P+ + W A+
Sbjct: 433 HSQIIQLGHDSSLSVGN----ALITMYSRCG-LVEAADTVFLTMPYVDSVS-WNAMIAAL 486
Query: 458 RIHG 461
HG
Sbjct: 487 AQHG 490
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I Y + + AR + + M D +W+ MI+GY G +E L +M LG+Q
Sbjct: 212 TTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQ 271
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL----GLVGVLGKCGHL 430
+E T+ +V SA +A +H +++ + P L L+ + +CG L
Sbjct: 272 LDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV--VQPSGHFVLSVNNALITLYTRCGKL 329
Query: 431 FEAQQFIEQKLPFEPTAEFWEAL 453
EA++ + K+P + W A+
Sbjct: 330 VEARRVFD-KMPVKDLVS-WNAI 350
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGYADNGLG 359
Y + D+V ++ Y G++ A ++F+ M+ R S++ MI ++ + G
Sbjct: 52 YLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDG 111
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
LQLF QM++LG P+ TF +V A
Sbjct: 112 HAALQLFVQMKRLGFVPDPFTFSSVLGA 139
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 197/381 (51%), Gaps = 33/381 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VK D L + C + + +++ +Y ++ +L + N VI MY +CG + A
Sbjct: 507 VKPDEVTCILLLQACTSLGALDFGEQIWEYAVEHGYGCELKVRNSVITMYTRCGCVEKAY 566
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VF H +S+ +W MI G A NG G++ + FE+M + G+ P+ QTF V SAC +
Sbjct: 567 QVFCHTPQKSVVTWSAMIMGLAANGFGEDAISAFEEMSRSGVVPDGQTFTGVLSACSHSG 626
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E F F+ M+ E+ + P HY +V ++G+ G L EA + + +++ P A W
Sbjct: 627 LVDEGFRFFDMMRYEYKMMPNVRHYGCIVDLMGRAGLLDEAYELVVKEMKVAPDATIWRT 686
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKA--------------DPKKIPTPPPKKRT--- 495
L RIHG +DL + +++L +A D +K+ R
Sbjct: 687 LLGACRIHGHVDLGEKVISHLIELKAQQAGDYVLLLNTYAAAGDWEKVAEVRKLMRENEI 746
Query: 496 ----AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHD 542
+ ++ L EF R +Y KL +N+ ++ + YVP LHD
Sbjct: 747 QTTPGCTTVELNGELHEFIADDASHPRKAEIY---GKLDEINRHLRIAGYVPHVSSDLHD 803
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+D E KE AL YHSE+LAIA+ L+ P R P+R+ KNLRVC DCHN K+ S + R +I
Sbjct: 804 LDSEGKECALTYHSEKLAIAFALLVMPQRRPIRLAKNLRVCVDCHNFTKVFSGVYNRLVI 863
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
VRD RFHHF G+CSC DYW
Sbjct: 864 VRDRTRFHHFNGGQCSCNDYW 884
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVH-DYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
G + +A L + C + +A+++H + ++ +R D +L ++ Y CG
Sbjct: 406 GRRGNAFSLAILLKPC---RTLSHARQLHANVVIEGHLR-DSLLATSLMRSYAICGVGDC 461
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSAC 388
AR+VFD M + +W+++I YA N + L LF++MR+ ++P+E T + + AC
Sbjct: 462 ARKVFDEMVMKDTVAWNVLITCYARNKRTKDTLWLFDEMRRGESEVKPDEVTCILLLQAC 521
Query: 389 GSADAIE 395
S A++
Sbjct: 522 TSLGALD 528
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 208/408 (50%), Gaps = 52/408 (12%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G AIE+ + G D++ F C + ++V + + ++V
Sbjct: 183 QNGLAGRAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVV 242
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++ MY +CG + AR F+ + +R++ +W MI GY +G G E ++LF MR+ G
Sbjct: 243 LGAALVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQG 302
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN+ TF+AV SAC A + E F SMKS +G+ P EHY +V + G+ G L +A
Sbjct: 303 PPPNDVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDA 362
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKK 493
+FI +P EP E W A+ ++H D +L E ++ L+P P
Sbjct: 363 MRFIHDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPES----------PSH 412
Query: 494 RTAIS---ILDGKSRLVE----------FRNPT------------LYRDDEKL------- 521
R +S L GK VE + P L+R EK
Sbjct: 413 RVLLSNLYALSGKMNHVEKVRDTMIKRRLKKPIGYSLIEIAGVAHLFRMGEKSHPKTSEI 472
Query: 522 -----KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA-RTPLR 575
K + ++ + YVP T VLH++++E +E AL YH E+LA+A+GL+ T TP+R
Sbjct: 473 YQYLEKLIEKITDVGYVPKTDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTTPIR 532
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IIKNLR+C DCH AIK MS + RE+IVRD RFHHFK GKCSC +YW
Sbjct: 533 IIKNLRICEDCHLAIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 580
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + C + +H + + + + + ++ +Y KCG + AR++FD +
Sbjct: 108 FTSVAKACADLSAIRAGMGIHAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIR 167
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---- 395
D+S+ +W+ MI+GY NGL ++++ +M+ G P+ TF+A SAC A A++
Sbjct: 168 DKSVVAWNAMISGYEQNGLAGRAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLGRQ 227
Query: 396 -EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ I E M E + G LV + +CG + +A+++
Sbjct: 228 VDKLIVSERM--EMNVVLGA----ALVNMYARCGLVNKAREW 263
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 208/402 (51%), Gaps = 42/402 (10%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ EA+++ G+ D C N E + H + + + +
Sbjct: 345 QTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYIT 404
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++N ++ +YGKCG + D+ R+F+ M R SW M++ YA G E +QLF++M +LG
Sbjct: 405 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLG 464
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+P+ T V SAC A +E+ +FE M +E+GI P HY ++ + + G + EA
Sbjct: 465 LKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEA 524
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
FI +PF P A W L + R G++++ A E +++LDP
Sbjct: 525 MGFI-NGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 583
Query: 479 -SKADP-----KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDE----------KLK 522
K D + + +K S + K +L F DDE KL+
Sbjct: 584 KGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFS-----ADDESSPYSDQIYAKLE 638
Query: 523 ALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L Q + ++ Y PDT +V HD+++ K + L HSERLAIA+GLI P+ P+R+ KNLR
Sbjct: 639 ELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLR 698
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCHNA K +S + GRE++VRD RFH FKDG CSCGD+W
Sbjct: 699 VCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 251 ADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q G KEAIE + +G+K D F ++ CG + +++H +++
Sbjct: 237 AMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT 296
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
++ + + + +I+MY KC + A+ VFD M +++ SW M+ GY G E +++F
Sbjct: 297 NLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIF 356
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF---GISPGTEHYL----G 419
M++ G+ P+ T SAC + ++EE S+F I+ G HY+
Sbjct: 357 LDMQRSGIDPDHYTLGQAISACANISSLEEG--------SQFHGKAITAGLIHYITVSNS 408
Query: 420 LVGVLGKCGHLFEAQQFIEQ 439
LV + GKCG + ++ + +
Sbjct: 409 LVTLYGKCGDIDDSTRLFNE 428
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 30/148 (20%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
T+ +L + K++H ++ L++ + +++MY K G ++DA++VF +
Sbjct: 139 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLD 198
Query: 340 DRSMD------------------------------SWHLMINGYADNGLGDEGLQLFEQM 369
DR+ SW MI G A NG+ E ++ F +M
Sbjct: 199 DRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREM 258
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEA 397
+ GL+ ++ F +V ACG AI +
Sbjct: 259 KIEGLKMDQYPFGSVLPACGGLGAINDG 286
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
N ++ Y K G +++ R F+ + DR +W+++I GY+ +GL ++ + M K
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMK 128
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 211/384 (54%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ G+K + C K+VH + L++ + D + +I+MY KCG
Sbjct: 593 QMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCG 652
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M ++ +FD + ++ W+++I GY +G G + ++LFE M+ G +P+ TFL V
Sbjct: 653 CMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLI 712
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A + E + M++ +G+ P EHY +V +LG+ G L EA + + + +P EP
Sbjct: 713 ACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNE-MPDEPD 771
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKK 485
+ W +L + R +GD+++ + + +++L+P+KA+ ++
Sbjct: 772 SGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQR 831
Query: 486 IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK------LKALNQMKESTYVPDTRYV 539
+ K S ++ + F + K +K ++ + Y PDT V
Sbjct: 832 MKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCV 891
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LH++++E K + L HSE+LAI++GL++T T LR+ KNLR+C DCHNAIK++S++V R
Sbjct: 892 LHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKR 951
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
++IVRDNKRFHHFK+G C+CGD+W
Sbjct: 952 DIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 5/197 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ +MD G+ D +L C K+ K++H + L++ + D + ++ +Y +C
Sbjct: 491 LVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQC 550
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
SM + +FD M ++S+ W++MI G++ N L E L F QM G++P E V
Sbjct: 551 SSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVL 610
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC A+ +H ++K+ +S L+ + KCG + ++Q ++ E
Sbjct: 611 GACSQVSALRLGKEVHSFALKAH--LSEDAFVTCALIDMYAKCGCMEQSQNIFDR--VNE 666
Query: 445 PTAEFWEALRNYARIHG 461
W + IHG
Sbjct: 667 KDEAVWNVIIAGYGIHG 683
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 247 PPSVADLARLCQEGKVKEAIELMDKGVK------ADAS--CFYTLFELCGNPKWYENAKK 298
P + L LC G + +A+ L+ + +D S L CG+ K +K
Sbjct: 54 SPILQRLHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRK 113
Query: 299 VHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VH S +R D+VL+ ++I MY CGS +D+R VFD ++ + ++ +++GY+ N
Sbjct: 114 VHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNA 173
Query: 358 LGDEGLQLF-EQMRKLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTE 415
L + + LF E + L P+ T V AC G AD +H ++K+ ++
Sbjct: 174 LFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKA----GGFSD 229
Query: 416 HYLG--LVGVLGKCGHLFEAQQFIE 438
++G L+ + GKCG + A + E
Sbjct: 230 AFVGNALIAMYGKCGFVESAVKVFE 254
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C E + VH L++ D + N +I MYGKCG + A +VF+ M +R++ SW
Sbjct: 205 CAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSW 264
Query: 347 HLMINGYADNGLGDEGLQLFEQM---RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
+ ++ ++NG E +F+++ + GL P+ T + V AC + + +
Sbjct: 265 NSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMV-VHG 323
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ + GI+ LV + KCG+L EA+ +
Sbjct: 324 LAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDM 359
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 258 QEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
+EG + EL+ ++ V+ + + C + K++H Y + D
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE 436
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N + Y KC S+ A RVF M +++ SW+ +I +A NG + L LF M
Sbjct: 437 LVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDS 496
Query: 373 GLQPNEQTFLAVFSAC 388
G+ P+ T ++ AC
Sbjct: 497 GMDPDRFTIGSLLLAC 512
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
++G+ D + T+ C VH + I ++ +NN +++MY KCG +
Sbjct: 292 EEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLG 351
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSAC 388
+AR +FD +++ SW+ +I GY+ G +L ++M R+ ++ NE T L V AC
Sbjct: 352 EARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 216/388 (55%), Gaps = 45/388 (11%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEM 321
+ L ++ V+ D + TLF+ C + A K+ D + T++ L+++ N VI M
Sbjct: 513 VMLSEEYVRPDWVTYVTLFKGCADL----GANKLGDQIIGRTVKVGLIIDTSVANAVITM 568
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG + +AR+VFD + + + SW+ MI GY+ +G+G + +++F+ + K G +P+ ++
Sbjct: 569 YSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 628
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+AV S C + ++E +F+ MK ISPG EH+ +V +LG+ GHL EA+ I+ +
Sbjct: 629 VAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDD-M 687
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP-- 483
P +PTAE W AL + +IHG+ +L + A + + +L D K+D
Sbjct: 688 PMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSA 747
Query: 484 ---KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKESTYVPD 535
K + KK S ++ +++ F+ +P + +KL L + +
Sbjct: 748 QIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELME-----KIAR 802
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
YV D ++ ++HSE+LA+A+GL++ P P+ I+KNLR+CGDCH IK++S
Sbjct: 803 LGYVRTD-----STRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLIST 857
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ GRE ++RD RFHHF G CSCGDYW
Sbjct: 858 VTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G+V+EA++++ KGV+ D++ + + C K++H +++
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 321
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + + ++E+Y K G +A+ VF+ + DR+ +W ++I+G+ G E ++LF Q
Sbjct: 322 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 381
Query: 369 MRKLGLQPNEQTFLAVFSACGS 390
MR + ++ + S C S
Sbjct: 382 MRAELMTLDQFALATLISGCCS 403
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM- 369
D+V +I Y + G++ AR FD M+++++ +W+ M+ Y +G ++GL++++ M
Sbjct: 456 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVML 515
Query: 370 RKLGLQPNEQTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+ ++P+ T++ +F C A+ + + I + G+ T ++ + KC
Sbjct: 516 SEEYVRPDWVTYVTLFKGCADLGANKLGDQII---GRTVKVGLIIDTSVANAVITMYSKC 572
Query: 428 GHLFEAQQFIE 438
G + EA++ +
Sbjct: 573 GRILEARKVFD 583
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N ++ Y K G ++DA +F M R + SW+ +++GY + L+ F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G PN T +CG A + +M +F +E LV + +CG
Sbjct: 150 RSGDSWPNAFTLACAMKSCG-ALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 208
Query: 430 L-FEAQQFIEQKLPFEPTAEFWEA-LRNYARIHGDIDLEDHAEEL 472
+ ++ F+ K EPT + L Y + +G DHA EL
Sbjct: 209 VDLASRLFVRIK---EPTMFCRNSMLAGYVKTYG----VDHALEL 246
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y K + A +FD M +R + SW++M++ + +G E L + M+ G++
Sbjct: 228 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287
Query: 376 PNEQTFLAVFSACG 389
+ T+ + +AC
Sbjct: 288 LDSTTYTSSLTACA 301
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 217/417 (52%), Gaps = 33/417 (7%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWY 293
QC V+ +V + Q K +EA + +G+ D + F T+ +
Sbjct: 406 QCVGDRDVVTWNVLVMG-FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAAL 464
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+HD ++ ++ + +I MY KCGS+ DA +VF+ + D ++ SW MI+ Y
Sbjct: 465 HQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY 524
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+G ++ ++LFE M G++P+ TF+ V SAC +EE HF SMK ++PG
Sbjct: 525 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 584
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY +V +LG+ G L EA++FIE +P +PT W AL R +G++ + A E +
Sbjct: 585 PEHYACMVDLLGRAGWLDEAKRFIES-MPMKPTPSVWGALLGACRKYGNLKMGREAAERL 643
Query: 474 VDLDP---------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF--R 510
+++P + + + +K S +D K+ F
Sbjct: 644 FEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAH 703
Query: 511 NPTLYRDDEKLKALNQMKEST----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ + DE K L ++++ YV +T +V + +++ +EQ L YHSE+LA+A+GL+
Sbjct: 704 DRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLL 763
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ P +P+RI KNLR CG CH +K+ S+I RE+IVRD RFH F DG CSCGDYW
Sbjct: 764 TLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L +K V + ++ C N ++VH ++ + + N +++MY KC
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF 397
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ ++F + DR + +W++++ G+ N +E F MR+ G+ P+E +F V +
Sbjct: 398 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 457
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
S A+ + IH + +K G L+ + KCG L +A Q E
Sbjct: 458 SASLAALHQGTAIHDQIIK--LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 515
Query: 447 AEFWEALRNYARIHG----DIDLEDH 468
+ W A+ + ++HG I+L +H
Sbjct: 516 S--WTAMISAYQLHGCANQVIELFEH 539
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ +++H + ++ + +++MY KC M A RVFD M +R++ SW+ MI G+
Sbjct: 263 HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 322
Query: 355 DNGLGDEGLQLFEQ-MRKLGLQPNEQTFLAVFSACGSADAI 394
N L D + +F+ +R+ + PNE + +V SAC + +
Sbjct: 323 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGL 363
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD--HMADRSMDSWHLMIN 351
++A ++H + + L N +I +Y KCG + A +F H +++ +W +I
Sbjct: 159 KHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT 218
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGIS 411
+ + + L LF QMR G PN+ TF ++ SA + + S+ + G
Sbjct: 219 HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG-QQLHSLIHKHGFD 277
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
LV + KC + A + +Q
Sbjct: 278 ANIFVGTALVDMYAKCADMHSAVRVFDQ 305
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 202/381 (53%), Gaps = 28/381 (7%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D V+ +AS ++ C N ++VH + ++ + ++ + ++ MY KCG +
Sbjct: 231 DSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLN 290
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
DA +VFD M+ + + +W+ MI+GYA +G G + ++LFE+M+ G+ P+ T LAV +AC
Sbjct: 291 DACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACI 350
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ FE+M+ + I P +HY +V +L + G L A I +PFEP
Sbjct: 351 HTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMI-HSMPFEPHPSA 409
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPT 488
+ L R++ +++ + A +++ DP A + +
Sbjct: 410 YGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKD 469
Query: 489 PPPKKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHD 542
K S ++ K EFR+ P L +KL L MK YVPD + LHD
Sbjct: 470 NAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHD 529
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
++ K Q L+ HSE+LAIA+GLIST LRI KNLR+CGDCHNA K++S+I RE+I
Sbjct: 530 VEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREII 589
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD RFHHF+ G CSCGDYW
Sbjct: 590 LRDTTRFHHFRGGHCSCGDYW 610
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
D F + + D +L ++ Y G++ A F M R++ SW+ ++ GY N D
Sbjct: 160 DLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRAD 219
Query: 361 EGLQLFEQMRKLGL-QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEH 416
+ L++F+ M + + QPN T +V C + A+ +H MK ++ GT
Sbjct: 220 DALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTS- 278
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG L +A + ++ + A W A+ + HG
Sbjct: 279 ---LLSMYCKCGDLNDACKVFDEMSTKDIVA--WNAMISGYAQHG 318
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D V N ++ + CG + ARRVF M + + SW+ M++G + NG +E +F M
Sbjct: 76 DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIM 134
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 210/397 (52%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
G+++EA+ L ++ D L C + + + +H Q + D+
Sbjct: 349 HSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIY 408
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++MY KCG + +A VF M R + +W MI G A NG+G L+ F QMR G
Sbjct: 409 LGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDG 468
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
QPN +++AV +AC + + E ++F+ M+ + I P EHY ++ +LG+ G L EA
Sbjct: 469 FQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA 528
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+ + +P +P A W ++ + R+H IDL A E ++ L+P +
Sbjct: 529 MDLV-KTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYID 587
Query: 481 -------ADPKKIPTPPPKKRTA----ISILDGKSRLV--EFRNPTLYRDDEKLKALN-Q 526
+ + + K+TA I++ + V + +P + L+ ++ +
Sbjct: 588 SRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHR 647
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K Y P T + D+D+E KEQALL HSE+LAIA+GLI+ P+ I KNLRVC DC
Sbjct: 648 LKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDC 707
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+AIK++SR+ RE+IVRD RFHHF++G CSC D+W
Sbjct: 708 HSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 41/231 (17%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL-----VLNNKVIEMYGKCG 326
GV+ D F+ LF+ C + ++ + + +R L ++N +I MY + G
Sbjct: 98 GVRPDGFTFHFLFK-CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLG 156
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGL---------------------------- 358
DARR FD + + +W ++I+G A G+
Sbjct: 157 LAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSR 216
Query: 359 ---GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
E + F+ M G+ P+E T +AV SAC +E +H + E G+
Sbjct: 217 ANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHL--LVEEKGMPTSE 274
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
+ L+ + KCG AQQ + L P + W A+ + HG +D+
Sbjct: 275 NLVVALIDMYAKCGDFGHAQQVFD-ALGRGPRPQSWNAIIDGYCKHGHVDV 324
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y K G + AR +FD M R + +++ M+ GY +G E L LF MR+ L+
Sbjct: 310 NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ T + + +AC S A+++ +H E E I GT L+ + KCG + E
Sbjct: 370 VDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT----ALLDMYMKCGRVDE 425
Query: 433 A 433
A
Sbjct: 426 A 426
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 216/388 (55%), Gaps = 45/388 (11%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEM 321
+ L ++ V+ D + TLF+ C + A K+ D + T++ L+++ N VI M
Sbjct: 493 VMLSEEYVRPDWVTYVTLFKGCADL----GANKLGDQIIGRTVKVGLIIDTSVANAVITM 548
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG + +AR+VFD + + + SW+ MI GY+ +G+G + +++F+ + K G +P+ ++
Sbjct: 549 YSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 608
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+AV S C + ++E +F+ MK ISPG EH+ +V +LG+ GHL EA+ I+ +
Sbjct: 609 VAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDD-M 667
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP-- 483
P +PTAE W AL + +IHG+ +L + A + + +L D K+D
Sbjct: 668 PMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSA 727
Query: 484 ---KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKESTYVPD 535
K + KK S ++ +++ F+ +P + +KL L + +
Sbjct: 728 QIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELME-----KIAR 782
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
YV D ++ ++HSE+LA+A+GL++ P P+ I+KNLR+CGDCH IK++S
Sbjct: 783 LGYVRTD-----STRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLIST 837
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ GRE ++RD RFHHF G CSCGDYW
Sbjct: 838 VTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q G+V+EA++++ KGV+ D++ + + C K++H +++
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + + ++E+Y K G +A+ VF+ + DR+ +W ++I+G+ G E ++LF Q
Sbjct: 302 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 361
Query: 369 MRKLGLQPNEQTFLAVFSACGS 390
MR + ++ + S C S
Sbjct: 362 MRAELMTLDQFALATLISGCCS 383
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM- 369
D+V +I Y + G++ AR FD M+++++ +W+ M+ Y +G ++GL++++ M
Sbjct: 436 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVML 495
Query: 370 RKLGLQPNEQTFLAVFSACG--SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
+ ++P+ T++ +F C A+ + + I + G+ T ++ + KC
Sbjct: 496 SEEYVRPDWVTYVTLFKGCADLGANKLGDQII---GRTVKVGLIIDTSVANAVITMYSKC 552
Query: 428 GHLFEAQQFIE 438
G + EA++ +
Sbjct: 553 GRILEARKVFD 563
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N ++ Y K G ++DA +F M R + SW+ +++GY + L+ F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G PN T +CG A + +M +F +E LV + +CG
Sbjct: 130 RSGDSWPNAFTLACAMKSCG-ALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 188
Query: 430 L-FEAQQFIEQKLPFEPTAEFWEA-LRNYARIHGDIDLEDHAEEL 472
+ ++ F+ K EPT + L Y + +G DHA EL
Sbjct: 189 VDLASRLFVRIK---EPTMFCRNSMLAGYVKTYG----VDHALEL 226
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y K + A +FD M +R + SW++M++ + +G E L + M+ G++
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 376 PNEQTFLAVFSACG 389
+ T+ + +AC
Sbjct: 268 LDSTTYTSSLTACA 281
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 215/390 (55%), Gaps = 33/390 (8%)
Query: 264 EAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
E LM + V+ D + L CG+ + +++ +++ + + + N +I M
Sbjct: 451 ETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMN 510
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K GS+ AR +F++M R + +W++MI GY+ +G E L LF++M K +PN TF+
Sbjct: 511 VKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFV 570
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
V SAC A +EE F + GI P E Y +V +LG+ G L EA+ I ++P
Sbjct: 571 GVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLI-NRMP 629
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------------SKAD 482
+P + W L RI+G++D+ + A E + +P + A
Sbjct: 630 LKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAK 689
Query: 483 PKKI-PTPPPKKRTAISILDGKSRL----VEFRN----PTLYRDDEKLKALNQMKESTYV 533
+K+ + +K + ++ + +L VE R+ +Y + +L + +K Y+
Sbjct: 690 VRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARL--MTAIKREGYI 747
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
P T+ VLH++ ++ KE+A+ YHSE+LAIAYG++S P+ P+RI KNLRVCGDCH+A K +
Sbjct: 748 PVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFI 807
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S++ GRE+I RD RFHHFK+G CSCGDYW
Sbjct: 808 SKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G K + F ++ + C P+ K VH + + + D+ + +I MY CGS+
Sbjct: 257 EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEG 316
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG- 389
ARRVFD M R + SW +MI GYA+N ++ LF M++ G+QP+ T++ + +AC
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
SAD IH + +++ FG + LV + KCG + +A+Q +
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVD--TALVHMYAKCGAIKDARQVFD 423
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G VKEA L +D+ ++ F + + C +P + K+ H ++
Sbjct: 132 AIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKV 191
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + ++ MY K GSM AR+VFD + R + ++++MI GYA +G G++ QLF
Sbjct: 192 GFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLF 251
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M++ G +PN +FL++ C + +A+ +H + M + G+ L+ +
Sbjct: 252 YRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNT--GLVDDVRVATALIRMYM 309
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
CG + E + + K+ + +R YA
Sbjct: 310 GCGSI-EGARRVFDKMKVRDVVSWTVMIRGYA 340
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ ++G++ D + + C + A+++H +++ DL+++ ++ MY KCG+
Sbjct: 355 MQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGA 414
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR+VFD M+ R + SW MI Y +NG G+E + F M++ ++P+ T++ + +A
Sbjct: 415 IKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNA 474
Query: 388 CGSADAIEEAF-IHFESMKSEF 408
CG A++ I+ +++K++
Sbjct: 475 CGHLGALDLGMEIYTQAIKADL 496
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D+ + LF+ C + K+V D+ +QS + ++ N +I+++ CG+M +AR+ F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
D + ++++ +W+ +I GYA G E LF QM ++P+ TFL V AC S
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSS 174
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 220/429 (51%), Gaps = 36/429 (8%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADAS----CFYT 282
N + + NQ +QV S + L Q G+ + A+ + + ++ S +
Sbjct: 252 NMIEDSIKVFNQLDYANQVTWTSF--VVGLVQNGREEVAVSIFREMIRCSISPNPFTLSS 309
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ + C + E +++H ++ + G+ +I +YGKCG+M AR VFD + +
Sbjct: 310 ILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELD 369
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
+ + + MI YA NG G E L+LFE+++ +GL PN TF+++ AC +A +EE F
Sbjct: 370 VVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFA 429
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
S+++ I +H+ ++ +LG+ L EA IE+ P W L N +IHG+
Sbjct: 430 SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEE--VRNPDVVLWRTLLNSCKIHGE 487
Query: 463 IDLEDHAEELMVDLDPSKADPKKIPT---------------------PPPKKRTAISILD 501
+++ + +++L P + T KK A+S +D
Sbjct: 488 VEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVD 547
Query: 502 GKSRLVEFRNPTLY--RDDEKLKALN----QMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
+ F L R E + L+ ++K Y P+TR+VL D+D+E K +L YH
Sbjct: 548 VDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYH 607
Query: 556 SERLAIAYGLISTPARTP-LRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKD 614
SE+LAIAY L T RT +RI KNLRVCGDCH+ IK +S + GR++I RD+KRFHHFK
Sbjct: 608 SEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKG 667
Query: 615 GKCSCGDYW 623
G CSC DYW
Sbjct: 668 GLCSCKDYW 676
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK KEA+E ++ +GV DA F + + + ++ H + + G VL+
Sbjct: 80 GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGL---AVVLGLEVLD 136
Query: 316 NKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
V ++MY K M DA VF + ++ + + +I GYA +GL E L++FE M
Sbjct: 137 GFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVN 196
Query: 372 LGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKS 406
G++PNE T + CG+ D + IH +KS
Sbjct: 197 RGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKS 232
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++++GVK + + CGN N + +H ++S + + ++ MY +C
Sbjct: 193 DMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCN 252
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ D+ +VF+ + + +W + G NG + + +F +M + + PN T ++
Sbjct: 253 MIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQ 312
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC S +E IH +MK G+ L+ + GKCG++ +A+ + +
Sbjct: 313 ACSSLAMLEVGEQIHAITMK--LGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDV 370
Query: 446 TA 447
A
Sbjct: 371 VA 372
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +K+I+ Y KCGS+ +AR++FD + R + +W+ MI+ + +G E ++ + M G
Sbjct: 37 LGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEG 96
Query: 374 LQPNEQTFLAVFSA 387
+ P+ TF A+ A
Sbjct: 97 VLPDAYTFSAISKA 110
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 208/388 (53%), Gaps = 32/388 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ ++ + A F +L N +++H ++ + + + N +I MY KCG
Sbjct: 464 EITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCG 523
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ A RVF+ M +R++ SW MI G+A +G L+ F QM + G++PNE T++A+ S
Sbjct: 524 SIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + E + HF SM + I P EHY +V +L + G L +A +FI +PF+
Sbjct: 584 ACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI-NTMPFQAD 642
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------SKADPKK 485
W R+H + +L A +++LDP S +K
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 486 IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRD-DEKLKALNQMKESTYVPDTRYV 539
+ K S ++ ++ +F +P ++ DE + + ++K YVPDT V
Sbjct: 703 MKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLV 762
Query: 540 LHDIDQEAKEQA---LLY-HSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
LH +++E E LLY HSE++A+A+GLIST P+R+ KNLRVCGDCHNA+K +S
Sbjct: 763 LHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYIST 822
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ GRE+++RD RFHHFKDGKCSC DYW
Sbjct: 823 VSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G +EAI +++ G ++D ++F C + K++H + ++S +
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 309 RGDLVLNNKVIEMYGKC---GSMTDARRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQ 364
D+ +++MY KC GS+ D R+VFD M D S+ SW +I GY N L E +
Sbjct: 301 VDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 365 LFEQMRKLG-LQPNEQTFLAVFSACG 389
LF +M G ++PN TF + F ACG
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACG 384
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 265 AIELMDK-GVK-ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
A++LM + G++ D+ F +L + C + + K VH ++ I D VL N +I +Y
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 323 GKCGSMTDARRVFDHM---ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
K G A VF+ M R + SW M+ Y +NG + +++F + +LGL PN+
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDY 167
Query: 380 TFLAVFSACGSADAI 394
+ AV AC ++D +
Sbjct: 168 CYTAVIRACSNSDFV 182
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST--IRGDLVLNNKVI 319
+K +E ++ G+ + C+ + C N + +V FL T D+ + +I
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIRACSNSD-FVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 320 EMYGKC-GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+M+ K S +A +VFD M++ ++ +W LMI G E ++ F M G + ++
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 379 QTFLAVFSACG 389
T +VFSAC
Sbjct: 270 FTLSSVFSACA 280
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 207/383 (54%), Gaps = 35/383 (9%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
KG D + + ++ C N +H+ ++S +L + + +I MY KCGS+ D
Sbjct: 179 KGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVD 238
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A ++F+ DR++ W +I +G + ++LFEQM + G++P+ TF++V SAC
Sbjct: 239 AFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSH 298
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+EE F +F SM GI PG EHY +V +L + G L A++FIE +P +P A W
Sbjct: 299 TGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIEL-MPIKPDASVW 357
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDP-------------------SKADP--KKIPTP 489
AL + R H ++ + + DL+P ++AD +K+ +
Sbjct: 358 GALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESI 417
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLY-RDDEKLKALNQMKEST--------YVPDTRYVL 540
+K S +D K+ F T++ + EK K + +M E YV +T + +
Sbjct: 418 GVRKEPGCSWIDIKNSTYVF---TVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI 474
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
+ +E KEQ+L YHSE++A+A+GL+S PA P+RI KNLR CGDCH +K S I RE
Sbjct: 475 -NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFARE 533
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+IVRD RFHHF +G CSCGDYW
Sbjct: 534 IIVRDINRFHHFTNGICSCGDYW 556
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 245 VLPPSVADLARLCQEGKVKEAIE-----LMDKGVKADASCFYTLFELCGNPKWYENAKKV 299
V+ V A+ C ++ E L++ D F ++F C N E K+V
Sbjct: 47 VVSALVDMYAKCCDMLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQV 106
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H L+ + + +NN + +MYGKCG D ++F + R + +W++MI Y N
Sbjct: 107 HGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNY 166
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL 418
++ F MR+ G P+E ++ +V +C + A+ + IH + ++S G
Sbjct: 167 EDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRS--GFVKNLRVAS 224
Query: 419 GLVGVLGKCGHLFEAQQFIEQ 439
L+ + KCG L +A Q E+
Sbjct: 225 SLITMYAKCGSLVDAFQIFEE 245
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 200/359 (55%), Gaps = 35/359 (9%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGY 353
+K+H++ + S + D L N +++MY KCG + A +F++ + +R + SW+++I+GY
Sbjct: 322 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY 381
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+G G E L+LF +M+ G++PN+ TF ++ SAC A I+E F M ++ + P
Sbjct: 382 GVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPE 440
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+HY +V +LG+ G L EA + I +K+P P+ E W AL RIHG+ +L + A +
Sbjct: 441 MKHYACMVDMLGRAGFLNEAFRLI-KKIPSRPSDEVWGALLLACRIHGNTELGEIAANNL 499
Query: 474 VDLDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNP 512
L+P + + + KK A S+++ + + F
Sbjct: 500 FQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTA 559
Query: 513 --------TLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
+YR E L +MK YVPD VLHD++ E KE L YHSE+LA+A+G
Sbjct: 560 DQSSPYYREVYRKVESLAI--EMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFG 617
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ P+++ KNLRVC DCH A K +S I GR++IVRD RFHHF+ G+CSCGDYW
Sbjct: 618 IMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 260 GKVKEAIEL---MDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ EAI+L M + GV + + + ++C + + VH +++ DL +
Sbjct: 111 GRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE 170
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + DA VFD M R + W MI Y + L LF +M++ G
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230
Query: 376 PNEQTFLAVFSACGSAD----AIEEAFIHFESMKSEFGIS 411
+E T ++V SA G AI A + F+ M+ GIS
Sbjct: 231 GDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGIS 270
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDY 302
D + ++ D+ C G++ +A E+ D+ + D C+ + L + A +
Sbjct: 166 DLFVEAALVDMYAKC--GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRK 223
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCG----SMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+ GD + V G+ G +++ AR VFD M +R+ SW+ M++GY NG
Sbjct: 224 MQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGR 283
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+ L LF QM+ PN T L + SAC
Sbjct: 284 PTDALSLFNQMQASECDPNPVTALIMVSAC 313
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDS--------WHLMINGYADNGLGDEGLQLFEQ 368
++I +Y K G + AR +FDH + M+ YA+ G E + L+
Sbjct: 63 RLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIY 122
Query: 369 MRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M+++G+ N T+ V C S A+ +H + +++ FG E LV + KC
Sbjct: 123 MQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE--AALVDMYAKC 180
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEAL 453
G + +A + ++ L + W A+
Sbjct: 181 GEIGDAHEVFDRMLIRDVVC--WTAM 204
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 210/392 (53%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E +K + + G++ D F T + + E +++H ++ D + N
Sbjct: 548 EEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAA 607
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MYGKCG + DA R+ DRS SW+ +I+ A +G + + F M KLG++PN
Sbjct: 608 MDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNH 667
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+F+ + SAC ++E ++ SM S +GI PG EH + ++ +LG+ G L EA+ FI
Sbjct: 668 VSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFIT 727
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+ +P P W +L RI+ ++DL A + +++LDPS
Sbjct: 728 E-MPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWE 786
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQM-KEST 531
++ +K+ A S + K + F +P + + + KL L ++ E+
Sbjct: 787 DVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAG 846
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPDT Y L D D+E KE + HSER+A+A+GLI+ P + +RI KNLRVCGDCH+ K
Sbjct: 847 YVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFK 906
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S ++GR++++RD RFHHF +G CSC DYW
Sbjct: 907 FVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFE----LCGNPKWYENAKKVHDYFLQSTI 308
LA Q+G+ A+++ + + Y F C +P+++ N K +H + + +
Sbjct: 334 LACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGL 393
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ +L++ N +I YGKC M +A++VF M +W+ +I G+A+N +E + F+
Sbjct: 394 QDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKL 453
Query: 369 MRKLGLQPNEQ-TFLAVFSACGS-ADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
MR+ + T + + +C + D I+ IH ++ + F + + L+ +
Sbjct: 454 MREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS--SLITMYA 511
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG L + +I +L F+ T+ W A+
Sbjct: 512 KCGDL-HSSSYIFDQLVFK-TSSVWNAI 537
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKK----VHDYFLQSTIRGDLVLNNKVIE 320
A +LM +G + + T+ + G+ +E+ K +H + + + D + + +I
Sbjct: 450 AFKLMREGSTSGVD-YITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLIT 508
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCG + + +FD + ++ W+ +I A G G+E L+L +MR G++ ++
Sbjct: 509 MYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFN 568
Query: 381 FLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFI 437
F S +EE +H ++K F + +H++ + + GKCG L +A + +
Sbjct: 569 FSTALSVAADLAMLEEGQQLHGSTIKLGFEL----DHFIINAAMDMYGKCGELDDALRIL 624
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
Q P + + W L + + HG
Sbjct: 625 PQ--PTDRSRLSWNTLISISARHG 646
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L +CG+ + + K VH ++ + ++ L N ++ +Y G DA +F M +R
Sbjct: 266 ILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPER 325
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-----GSADAIEE 396
+ SW+ M+ Y +G L++F +M + + N TF + +AC + I
Sbjct: 326 DLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILH 385
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
F+ ++ E I L+ GKC + EA++ + Q++P
Sbjct: 386 GFVVVLGLQDELIIGN------TLITFYGKCHKMAEAKK-VFQRMP 424
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H + ++ + D+ + + Y G +++A+++F+ M DR++ SW ++ Y+DNG
Sbjct: 82 HGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSK 141
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYL 418
E + +++MR G+ NE V S+CG D I + ++K FG+
Sbjct: 142 KEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALK--FGLETKVSAAN 199
Query: 419 GLVGVLGKCGHLFEA 433
L+ + G CG + EA
Sbjct: 200 SLIFMFGGCGDINEA 214
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I M+G CG + +A +F+ M +R SW+ +I+ A N L +E + F MR + +
Sbjct: 199 NSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEE 258
Query: 376 PNEQTFLAVFSACGSADAIE 395
N T + S CGS D ++
Sbjct: 259 INYTTLSILLSICGSVDYLK 278
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K G + A+ VFD M++R+ SW+ M++GY G E + F + +G++P+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGI 410
++ +AC + + + F + G+
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGL 90
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 201/367 (54%), Gaps = 33/367 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C Y N ++ H ++ L N +I MY KCG + +A++VF M SW
Sbjct: 427 CAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSW 486
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ +I +G G E + ++E+M K G++P+ TFL V +AC A +++ +F SM++
Sbjct: 487 NALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMET 546
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+ I PG +HY L+ +L + G EA+ IE LPF+PTAE WEAL + R+HG+++L
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSEAESIIES-LPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
A + + L P K + KK A S ++ +++
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 506 LVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEA-KEQALLYHS 556
+ F +Y+ + L +M+ YVPDT +VLHD++ + KE L HS
Sbjct: 666 VHTFLVDDTSHPEAEAVYKYLQDLG--KEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHS 723
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
E++A+A+GL+ P T +RI KNLR CGDCHN + +S++V R++I+RD KRFHHF++G+
Sbjct: 724 EKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGE 783
Query: 617 CSCGDYW 623
CSCG++W
Sbjct: 784 CSCGNFW 790
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 50/255 (19%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL- 314
G +EA+E++ + G++ D + ++ C N + + K+VH Y L+ R D
Sbjct: 265 GLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR---REDFSFH 321
Query: 315 -NNKVIEMYGKCGSMTDARRVFD-------------------------------HMADRS 342
+N ++ +Y KCG +AR +F+ M +++
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH-- 400
+ SW +MI+G A+NG G+EGL+LF M++ G +P + F +C A+ A+ +
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC----AVLGAYCNGQ 437
Query: 401 -FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
F + + G L+ + KCG + EAQQ + + +P + W AL
Sbjct: 438 QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQ-VFRTMPCLDSVS-WNALIAALGQ 495
Query: 460 HG-DIDLEDHAEELM 473
HG ++ D EE++
Sbjct: 496 HGHGVEAVDVYEEML 510
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 44/178 (24%)
Query: 314 LNNKVIEMYGKCGS----MTDARRVFDHMADRSMDSW----------------------- 346
++N ++ +Y +C S + AR+VFD + ++ SW
Sbjct: 186 VSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGM 245
Query: 347 ---------HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+ MI+GY + GL E L++ +M G++ +E T+ +V AC +A ++
Sbjct: 246 DENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLG 305
Query: 398 F-IHFESMKSEFGISPGTEHYL-GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+H ++ E + H+ LV + KCG EA+ E K+P + W AL
Sbjct: 306 KQVHAYVLRRE----DFSFHFDNSLVTLYYKCGKFNEARAIFE-KMPAKDLVS-WNAL 357
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 200/359 (55%), Gaps = 35/359 (9%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH--MADRSMDSWHLMINGY 353
+K+H++ + S + D L N +++MY KCG + A +F++ + +R + SW+++I+GY
Sbjct: 353 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY 412
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+G G E L+LF +M+ G++PN+ TF ++ SAC A I+E F M ++ + P
Sbjct: 413 GVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPE 471
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
+HY +V +LG+ G L EA + I +K+P P+ E W AL RIHG+ +L + A +
Sbjct: 472 MKHYACMVDMLGRAGFLNEAFRLI-KKIPSRPSDEVWGALLLACRIHGNTELGEIAANNL 530
Query: 474 VDLDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNP 512
L+P + + + KK A S+++ + + F
Sbjct: 531 FQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTA 590
Query: 513 --------TLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
+YR E L +MK YVPD VLHD++ E KE L YHSE+LA+A+G
Sbjct: 591 DQSSPYYREVYRKVESLAI--EMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFG 648
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ P+++ KNLRVC DCH A K +S I GR++IVRD RFHHF+ G+CSCGDYW
Sbjct: 649 IMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A VH Y + + GD+ + N ++ MY KCG++ AR VFD M +R+ SW+ M++GY
Sbjct: 252 AISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQ 311
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG + L LF QM+ PN T L + SAC
Sbjct: 312 NGRPTDALSLFNQMQASECDPNPVTALIMVSAC 344
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Query: 260 GKVKEAIEL---MDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ EAI+L M + GV + + + ++C + + VH +++ DL +
Sbjct: 111 GRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE 170
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + DA VFD M R + W MI Y + L LF +M++ G
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230
Query: 376 PNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFE 432
+E T ++V SA G D +H ++ + F +S G +VG+ KCG++
Sbjct: 231 GDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNS----IVGMYAKCGNVER 286
Query: 433 AQQFIEQ 439
A+ ++
Sbjct: 287 ARLVFDR 293
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDS--------WHLMINGYADNGLGDEGLQLFEQ 368
++I +Y K G + AR +FDH + M+ YA+ G E + L+
Sbjct: 63 RLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIY 122
Query: 369 MRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M+++G+ N T+ V C S A+ +H + +++ FG E LV + KC
Sbjct: 123 MQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE--AALVDMYAKC 180
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEAL 453
G + +A + ++ L + W A+
Sbjct: 181 GEIGDAHEVFDRMLIRDVVC--WTAM 204
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 214/386 (55%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ G + S F + C + + K++H ++ + D+ + N ++ MY +CG
Sbjct: 293 DMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECG 352
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A VF ++ ++ + SW+ +I G A +G G L F QM + G+ PNE TF + S
Sbjct: 353 NVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLS 412
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + + FE + +HY +V +LG+CG L EA++ + + +P +
Sbjct: 413 ACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELV-RYMPVKAN 471
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-----------------KADPKKIPTP 489
+ W AL + R+H ++++ + A + ++DL+P+ AD ++
Sbjct: 472 SMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVK 531
Query: 490 PPKKR------TAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTR 537
+ ++ +L GK EF +P R EKL L + +KE YVPD +
Sbjct: 532 MKQGGLVKQPGSSWVVLRGKKH--EFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQK 589
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+ LHD++ E KE+ L +HSERLAIA+GL+ST + + ++KNLRVCGDCH+ IK+MS+IV
Sbjct: 590 FALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIV 649
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GR+++VRD+ RFHHFK+G CSC DYW
Sbjct: 650 GRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK +EA+ +++ GV+ S F + C N + +VH + ++ ++
Sbjct: 181 GKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFIS 240
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I Y C + A ++F+ +++ W ++ Y N + L++F M K+G
Sbjct: 241 VSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGAL 300
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHL 430
PN+ TF AC +A+++ +M + G+ T+ ++G LV + +CG++
Sbjct: 301 PNQSTFSITLKACCGLEALDKG-KEIHTMAIKLGLE--TDVFVGNSLVVMYTECGNV 354
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 202 NNQQNQGYPQARNSYQQV-SPG-HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLA----- 254
N+ +NQ QAR + ++ SP H + N C A SV D+
Sbjct: 21 NHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSM 80
Query: 255 -RLCQE-GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
+ C + G + A L D+ + + + T+ G K + + FL ++ D+
Sbjct: 81 IKGCLDCGNLGMATRLFDEMPEKNVISWTTMVN--GYLK-FGRVELAQRLFLDMHVK-DV 136
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
N ++ Y + G + + R+F+ M R + SW MI G NG +E L +F++M +
Sbjct: 137 AAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRS 196
Query: 373 GLQPNEQTFLAVFSACGSADAIE 395
G++P TF V SAC A+A+E
Sbjct: 197 GVEPTWSTFACVLSAC--ANAVE 217
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 208/396 (52%), Gaps = 33/396 (8%)
Query: 260 GKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+EL + GV+ D+ ++ + + K++H + ++ + L
Sbjct: 563 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 622
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ +++MY +CG++ +R VF+ + ++ + W MIN Y +G G + LF +M +
Sbjct: 623 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ F+AV AC + + E ESMK E+ + P EHY LV +LG+ HL EA Q
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQ 742
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS---------------- 479
F+ + + EPTAE W AL +IH + +L + A + ++++DP
Sbjct: 743 FV-KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAER 801
Query: 480 -----KADPKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ--M 527
+ ++ KK S ++ +++ F +P Y KL + +
Sbjct: 802 RWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLA 861
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
KE YV T++VLH+ +E K Q L HSERLAIAYG+++TP LRI KNLRVCGDCH
Sbjct: 862 KEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCH 921
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
N K++S+ REL++RD RFHHFK G CSCGD W
Sbjct: 922 NFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 247 PPSVADLARLCQEGKVKEAIE-LMDKGVKADASCFY------TLFELCGNPKWYENAKKV 299
P L +C+ G V EA + L D S F ++ ELCG+ K ++V
Sbjct: 41 PVETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQV 100
Query: 300 HDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
H + + S + + L+ +++ MYGKCG + DA ++FD M +++ +W+ MI Y NG
Sbjct: 101 HAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGE 160
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHY 417
L+L+ +MR G+ + TF + ACG D A +H ++K + +
Sbjct: 161 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVAN- 219
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+VG+ KC L A+Q + ++P + W ++
Sbjct: 220 -SIVGMYTKCNDLNGARQLFD-RMPEKEDVVSWNSM 253
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G A+EL + G+ D ++ C K + K++H Y ++ + DLV
Sbjct: 461 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLV 519
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N ++++YG+CG++ A R+F+ + + + SW MI+ Y NGL +E L+LF M++ G
Sbjct: 520 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 579
Query: 374 LQPNEQTFLAV 384
++P+ + +++
Sbjct: 580 VEPDSISLVSI 590
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 207 QGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI 266
+GY + + N LN ++ P + V+ + + ++ G+ EA+
Sbjct: 209 EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN-SMISAYSSNGQSIEAL 267
Query: 267 ELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
L + KA + F + C + + + +H L+S+ ++ + N +I MY
Sbjct: 268 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 327
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
+ G M +A +F +M D SW+ M++G+ NGL E LQ + +MR G +P+ +
Sbjct: 328 ARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 387
Query: 383 AVFSACG-SADAIEEAFIHFESMK 405
++ +A S + + IH +MK
Sbjct: 388 SIIAASARSGNTLHGMQIHAYAMK 411
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ Q G EA+ E+ D G K D ++ + ++H Y +++ +
Sbjct: 355 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGL 414
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL + N +++MY K SM +FD M D+ + SW +I G+A NG L+LF +
Sbjct: 415 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 474
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL---GLVGVL 424
++ G+ + ++ AC I IH + I G + G+V V
Sbjct: 475 VQLEGIDLDVMMISSILLACSGLKLISSVKEIH------SYIIRKGLSDLVLQNGIVDVY 528
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+CG++ A + E + F+ + + Y +H L + A EL + + +P
Sbjct: 529 GECGNVDYAARMFEL-IEFKDVVSWTSMISCY--VHN--GLANEALELFHLMKETGVEPD 583
Query: 485 KI 486
I
Sbjct: 584 SI 585
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 198/354 (55%), Gaps = 30/354 (8%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
K+H +++ + D+ + +I+MYGKCG + DA +F + + W+ +I+ +G
Sbjct: 473 KIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHG 532
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G++ LQLF+ MR G++ + TF+++ SAC + ++EA F++M+ E+ I P +HY
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHY 592
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V + G+ G+L +A + +P + A W L RIHG+ +L A + ++++D
Sbjct: 593 GCMVDLFGRAGYLEKAYNLVSN-MPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVD 651
Query: 478 PSKAD----PKKIPTPPPKKRTAISILDGKSRLVEFR----------------------- 510
I K A+ + +R R
Sbjct: 652 SENVGYYVLLSNIYANVGKWEGAVKV-RSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQS 710
Query: 511 NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
+P E+L+ LN +MK YVPD +VL D++++ KE+ L HSERLAI +G+ISTP
Sbjct: 711 HPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTP 770
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++P+RI KNLRVCGDCHNA K +S+I RE+IVRD+ RFHHFKDG CSCGDYW
Sbjct: 771 PKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKC 325
E++ G++ D +L + G + VH + ++ + D+V+ N ++ MY K
Sbjct: 339 EMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKL 398
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK-LGLQPNEQTFLAV 384
GS+ AR VF+ + R + SW+ +I GYA NGL E + + M + + PN+ T++++
Sbjct: 399 GSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSI 458
Query: 385 FSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
A A+++ IH +K+ + L+ + GKCG L +A + +P
Sbjct: 459 LPAYSHVGALQQGMKIHGRLIKNCLFLDVFVAT--CLIDMYGKCGRLEDAMSLFYE-IPQ 515
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
E + W A+ + IHG H E+ + +AD K
Sbjct: 516 ETSVP-WNAIISSLGIHG------HGEKALQLFKDMRADGVK 550
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ CQ G V EA+ ++D+ VK D ++ +C VH Y ++
Sbjct: 218 AMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKH 277
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D+ ++N +I MY K G + DA+RVFD M R + SW+ +I Y N L F
Sbjct: 278 GLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFF 337
Query: 367 EQMRKLGLQPNEQTFLAVFSACG 389
++M +G++P+ T +++ S G
Sbjct: 338 KEMLFVGMRPDLLTVVSLASIFG 360
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V E + L GV+ D F + + C + + +K+H + L+ D+ + +I +
Sbjct: 137 VTELLSL--SGVRPDFYTFPPVLKACLS---LADGEKMHCWVLKMGFEHDVYVAASLIHL 191
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y + G++ A +VF M R + SW+ MI+G+ NG E L++ ++M+ ++ + T
Sbjct: 192 YSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTV 251
Query: 382 LAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ C S D + +H +K G+ L+ + K G L +AQ+ +
Sbjct: 252 SSMLPICAQSNDVVGGVLVHLYVIKH--GLESDVFVSNALINMYSKFGRLQDAQRVFD 307
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +F C N AK++H L D+VL +++ +Y G ++ + F H+
Sbjct: 54 FNLVFRSCTN---INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGS 390
+++ SW+ M++ Y G + + ++ L G++P+ TF V AC S
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS 162
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 219/397 (55%), Gaps = 34/397 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNK 317
E VK ++ G + D F + C N K++H ++S I + + +NN
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I +Y K G++ DAR VFD M + + S++ MI GYA +G G E L L+++M G+ PN
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TF+AV SAC ++E +F +MK F I P EHY ++ +LG+ G L EA++FI
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDL-EDHAEELMVDLDPSKADP------------- 483
+ +P++P + W AL R H ++ L E A ELMV + P A P
Sbjct: 507 DA-MPYKPGSVAWAALLGACRKHKNMALAERAANELMV-MQPLAATPYVMLANMYADARK 564
Query: 484 --------KKIPTPPPKKRTAISILDGKSR-----LVEFRNPTLYRDDEKL-KALNQMKE 529
K + +K+ S ++ K + ++ +P + +E L + + +MK+
Sbjct: 565 WEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKK 624
Query: 530 STYVPDTRYVLHDIDQEAKEQALL---YHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
YV D ++ + D+ + + +HSE+LA+A+GL+ST L ++KNLR+CGDC
Sbjct: 625 VGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDC 684
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNAIK MS + GRE+IVRDN RFH FKDGKCSCGDYW
Sbjct: 685 HNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ KG K D ++ + ++ H +++ + + + +I+ Y KCG
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 327 S---MTDARRVFDHMADRSMDSWHLMINGYADNG-LGDEGLQLFEQMRKLGLQPNEQTFL 382
M D+ +VF + + W+ MI+GY+ N L +E ++ F QM+++G +P++ +F+
Sbjct: 290 GCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV 349
Query: 383 AVFSAC 388
V SAC
Sbjct: 350 CVTSAC 355
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 31/125 (24%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF------------------- 335
K +H +++S + L+N + +Y KCG ++ AR F
Sbjct: 26 TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 336 ----DHMADRSMD--------SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
H+A + D S++ +I+GYAD + LF++MRKLG + + T
Sbjct: 86 KDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSG 145
Query: 384 VFSAC 388
+ +AC
Sbjct: 146 LIAAC 150
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+NN + Y K G + +A VF M + R SW+ MI Y + G + L L+++M
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 373 GLQPNEQTFLAVFSACGSAD-AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG--- 428
G + + T +V +A S D I H + +K+ G + GL+ KCG
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA--GFHQNSHVGSGLIDFYSKCGGCD 292
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
++++++ ++ L P W +
Sbjct: 293 GMYDSEKVFQEILS--PDLVVWNTM 315
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 225/401 (56%), Gaps = 38/401 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+EL + G+ ++ + +L ++ K+VH + L+ + +V
Sbjct: 189 QLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVV 248
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+MY KCG++ AR++F++M R++ SW+ M+ GY+ +G G E ++LF+ MR+
Sbjct: 249 LQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREEN 308
Query: 374 -LQPNEQTFLAVFSACGSADAIEEAFIHF-ESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++P+ TFLAV S C ++ F E M I G EHY ++ +LG+ G +
Sbjct: 309 KVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVE 368
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------- 481
EA + I +K+PFEPTA W +L R+H + ++ + +++++P A
Sbjct: 369 EAFELI-KKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLY 427
Query: 482 -------DPKKIPTPPPKKRTAISILDGKSRL-VEFRNPTLY--------RDDEKLKA-- 523
D + + +K A+ G+S + ++ T Y R++ LK
Sbjct: 428 ASAGRWEDVRNVRELMMEK--AVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRE 485
Query: 524 -LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L + KES YVPD VL+D+D+E KE+ LL HSE+LA+A+GLIST PLR+IKNLR+
Sbjct: 486 LLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRI 545
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCHN K +S++ GR++ +RD RFHH G CSCGDYW
Sbjct: 546 CVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N + ++VH + +++ + L+ ++I +Y KC + AR VFD M +R++ SW
Sbjct: 20 CVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSW 79
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMK 405
MI+GY+ G E L LF QM + +PNE TF V S+C E IH K
Sbjct: 80 TAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFK 139
Query: 406 SEFG--ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+ I G+ L+ + K G + EA+ E LP + YA+ +
Sbjct: 140 RNYENHIFVGSS----LLDMYAKAGRIHEARGVFEC-LPERDVVSCTAIISGYAQ----L 190
Query: 464 DLEDHAEELMVDL 476
L++ A EL L
Sbjct: 191 GLDEEALELFCRL 203
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ L + +++D F T+ C +E +++H + + +
Sbjct: 88 QRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIF 147
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY K G + +AR VF+ + +R + S +I+GYA GL +E L+LF ++++ G
Sbjct: 148 VGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREG 207
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ N T+ ++ +A A++ +H ++ E ++ L+ + KCG+L
Sbjct: 208 MSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN--SLIDMYSKCGNLNY 265
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHG 461
A++ I +P + L Y++ HG
Sbjct: 266 ARK-IFNNMPVRTVISWNAMLVGYSK-HG 292
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 206/399 (51%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EAI L D+ VK D F ++ + C + + E K VH + +R D
Sbjct: 678 QNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY 737
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L+ + +MY KCG + A VFD M++RS+ SW +MI GY +G + + LF QM G
Sbjct: 738 LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG 797
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ TF+ + SAC A A+EE ++F SM SEFG+ P +H+ +V +L + G L A
Sbjct: 798 IKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGA 856
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
Q I LPF + W AL N RIH ID+ E+ ++D+D +
Sbjct: 857 YQII-TSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAE 915
Query: 483 ----------PKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
+ + +K S ++ ++ F + +YR E ++L
Sbjct: 916 EGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSL 975
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ PD V + KE ++ HSE+LAIA+G+I+T T LRI KNLRVC
Sbjct: 976 VHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCR 1033
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ KI S+I GRE+I+RD RFH F++G CSC DYW
Sbjct: 1034 DCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ +G+ D+ + CG + + ++H Y +++ D V N +I+MY KC
Sbjct: 590 VQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV-QNALIDMYAKC 648
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A ++F+ + ++S+ +W+ MI G++ NG E + LF+QM ++ ++ TFL+V
Sbjct: 649 GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVI 708
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC +E+ ++H + + +G+ + L + KCG L A ++ E
Sbjct: 709 QACSHLGYLEKGKWVHHKLIM--YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS--E 764
Query: 445 PTAEFWEALRNYARIHGDID 464
+ W + +HG I+
Sbjct: 765 RSIVSWSVMIAGYGMHGQIN 784
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELC--------GNPKWYENAKK 298
DL+ + G+ E +++ + + V+ D+ ++ E C G + +
Sbjct: 461 GDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRS 520
Query: 299 VHDYFLQSTIRGDL-VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VH + ++ + +L L ++E+Y G++ D +VF+ + ++++ SW+ +I+ + NG
Sbjct: 521 VHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNG 580
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
+E L LF QM+ GL P+ + + SACG+ +F + + I G +
Sbjct: 581 QPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI-----SFSQLGAQIHGYIIKTGNFND 635
Query: 418 L---GLVGVLGKCGHLFEAQQFIEQ 439
L+ + KCG + A + E+
Sbjct: 636 FVQNALIDMYAKCGFVHSANKMFEK 660
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 210/405 (51%), Gaps = 35/405 (8%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L + G+ EA+ E+ + G + D +L C N + + +H Y L + +
Sbjct: 192 ISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGV 251
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS--WHLMINGYADNGLGDEGLQLF 366
D V+ ++ MY KCG M +A VF + D W MI+G+A +G G E L+ F
Sbjct: 252 DVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWF 311
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+MR+ G++PN TF AV AC +EE F+SMK + ++P EHY +V +LG+
Sbjct: 312 NRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGR 371
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------- 479
G L EA++ I +K+P +P+A W AL IH D L +V++D
Sbjct: 372 SGRLDEAKELI-KKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQ 430
Query: 480 -------------------KADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK 520
K +P P K ++ + + +P + + K
Sbjct: 431 LATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLK 490
Query: 521 LKALNQM--KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
LK + + ++ Y P T+ +L D++ E KE A+ HSE+LAIA+GLI+T T +R+IK
Sbjct: 491 LKQIAERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIK 550
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLR+C DCH K++S+I RE+I+RD RFHHF+DG CSC DYW
Sbjct: 551 NLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHFRDGSCSCKDYW 595
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 34/227 (14%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ V ++ F L C N A +VH ++ D+ N ++ +Y CG
Sbjct: 78 QMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCG 137
Query: 327 SMTDARRVFDHMADRSMDSWHLMI-------------------------------NGYAD 355
+ AR++FD++ +R SW++MI +G +
Sbjct: 138 EIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVE 197
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
G E L L +M+ G + + ++ +AC + A+++ ++HF + + G+
Sbjct: 198 AGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNN--GVDVDR 255
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG + EA + + W A+ + IHG
Sbjct: 256 VIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHG 302
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 216/394 (54%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + +EL +GV+ + F ++ + C E ++H +++ + D + +
Sbjct: 455 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 514
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+++MYGKCG ++ + ++F+ + R+ +W+ +IN +A +G G E +Q F++M G++P
Sbjct: 515 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 574
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N F+++ +AC A ++E +F SMK GI P EHY ++ G+ G L EA +F
Sbjct: 575 NHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 634
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS----------------- 479
I + +P +P A W +L R+ G +L + A + ++ L+P
Sbjct: 635 ISE-MPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQ 693
Query: 480 ----KADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
KA K + KK S +D + F +P EKL+ L ++KE
Sbjct: 694 WEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKE 753
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y+PDT ++ +++ AKE+ L YHSER+A+A+ LIS PA P+ + KNLR+C DCH A
Sbjct: 754 EGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTA 813
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K + ++ R++IVRDN RFHHF +G+CSCGDYW
Sbjct: 814 FKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L + + + +MY KCG +++A RVFD M + +W MI+GYA NG + + F M+
Sbjct: 305 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 364
Query: 371 KLGLQPNEQ-TFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ GL +Q F +V SA G D IH K+ F + + L+ + K
Sbjct: 365 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN--ALIDMYAKSM 422
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
+ A + L +P W + + I G I+ D EE +V
Sbjct: 423 DVESASRV----LKIDPGG--WNVVSGTSMIDGYIE-TDCVEEALV 461
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 22/199 (11%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V AD F ++ G K +K +H ++ ++ + N +I+MY K + A
Sbjct: 369 VGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESAS 428
Query: 333 RVFDHMADRSMD--SWHL-----MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
RV +D W++ MI+GY + +E L ++ ++R+ G++PNE TF ++
Sbjct: 429 RVLK------IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI 482
Query: 386 SACGSADAIEE-AFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
C +E+ A +H + +K++ + ++G LV + GKCG + + Q + +
Sbjct: 483 KGCAMQALLEQGAQLHAQVIKTDL----IRDSFVGSTLVDMYGKCGLISLSMQLFNE-IE 537
Query: 443 FEPTAEFWEALRNYARIHG 461
+ T W A+ N HG
Sbjct: 538 YR-TDIAWNAVINVFAQHG 555
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 282 TLFELCGNPKWYENAKKVHD-YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+L + CG + +H L L N +I MY C + A R+F M
Sbjct: 25 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
R+ SW +++G + N + + L F MR+ G+ P +
Sbjct: 85 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 282 TLFELCGNPKWYENAKKVHD-YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+L + CG + +H L L N +I MY C + A R+F M
Sbjct: 175 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 234
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
R+ SW +++G + N + + L F MR+ G+ P
Sbjct: 235 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 206/379 (54%), Gaps = 29/379 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K D+ + C + E K++H Y L++ D + N ++++Y KCG + AR
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+FD + + + SW +MI GY +G G+E + F +MR G++P+E +F+++ AC +
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+E+ + F MK++F I P EHY +V +L + G+L +A +F+E LP P A W A
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMET-LPIAPDATIWGA 606
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTPPP 491
L R + DI+L + E + +L+P K +KI
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 492 KKRTAISILD--GKSRLVEFRNPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
+K S ++ GK L N + + + +++L +MKE + P T+Y L + D
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINAD 726
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+ KE AL HSE+LA+A+GL++ P R +R+ KNLRVCGDCH K MS+ RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D+ RFHHFKDG CSC +W
Sbjct: 787 DSNRFHHFKDGYCSCRGFW 805
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 113/284 (39%), Gaps = 60/284 (21%)
Query: 251 ADLARLCQEGKVKEAIEL--MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
A + CQ G ++ A+EL M + + + + ++ +LC K + + KKVH +++
Sbjct: 71 AKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSV 130
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHM------------------------------ 338
D L K++ Y CG + + RRVFD M
Sbjct: 131 GVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 339 ---------------------ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
DR + SW+ MI+GY NGL + GL +++QM LG+ +
Sbjct: 191 MVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 250
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T ++V C ++ + +H ++KS F + L+ + KCG L A +
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSN--TLLDMYSKCGDLDGALRV 308
Query: 437 IEQKLPFEPTAEFWEALRNY---ARIHGDIDLEDHAEELMVDLD 477
E K+ + + Y R G I L E+ V LD
Sbjct: 309 FE-KMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLD 351
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M G+ D + ++ C N K VH ++S+ + +N +++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A RVF+ M +R++ SW MI GY +G D ++L +QM K G++ + ++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 387 ACGSADAIEEA-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
AC + +++ +I +M+S + L+ + KCG +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCN------ALMDMYAKCGSM 403
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAK 297
G++ + + +A ++G+ AI+L+ +GVK D ++ C +N K
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VHDY + + +L + N +++MY KCGSM A VF M + + SW+ MI
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------ 426
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH 416
L+P+ +T V AC S A+E IH +++ G S
Sbjct: 427 ---------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRN--GYSSDRHV 469
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG L A+ + +P + + + Y +HG
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDM-IPSKDLVSWTVMIAGYG-MHG 512
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 212/399 (53%), Gaps = 34/399 (8%)
Query: 258 QEGKVKEAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q GK EA+ + + K +K + + C E + +H Y + IR +
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ + +I MY KCG + +R VF+ + R + W MI G A +G G+E + +F +M++
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++PN TF VF AC ++EA F M+S +GI P +HY +V VLG+ G+L +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
A +FIE +P P+ W AL +IH +++L + A +++L+P
Sbjct: 521 AVKFIEA-MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEFRN-----PTLYRDDEKL-KALN 525
K + KK S ++ + EF + P + KL + +
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVME 639
Query: 526 QMKESTYVPDTRYVLHDIDQE-AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++K + Y P+ VL I++E KEQ+L HSE+LAI YGLIST A +R+IKNLRVCG
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCG 699
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ K++S++ RE+IVRD RFHHF++G+CSC D+W
Sbjct: 700 DCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G +A+EL K VKA + C + E ++V Y ++ + +L
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA------------------- 354
L N +++MY KCGS+ DA+R+FD M ++ +W M++GYA
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 355 ------------DNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
NG +E L +F +++ + ++ N+ T ++ SAC A+E +IH
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLPFEPTAEFWEALRNYA 457
S + GI L+ + KCG L ++++ +E++ F W A+
Sbjct: 389 --SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF-----VWSAMIGGL 441
Query: 458 RIHG 461
+HG
Sbjct: 442 AMHG 445
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++S + D+ + N +I Y CG + A +VF + ++ + SW+ MING+
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
G D+ L+LF++M ++ + T + V SAC +E
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 208/393 (52%), Gaps = 29/393 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPK-WYENAKKVHDYFLQSTIRGDLVLNNK 317
+G I++ G+K + ++ + C +P + ++ H ++ L +++
Sbjct: 487 DGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSA 546
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MY + GS+ A+ +F+ DR + SW+ M++GYA +G + L +F QM G++ +
Sbjct: 547 LVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMD 606
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TFL+V C A +EE +F+SM ++GI+P EHY +V + + G L EA I
Sbjct: 607 GVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLI 666
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------------- 483
E + F W L ++H +++L A E ++ L+P +
Sbjct: 667 E-GMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKW 725
Query: 484 -------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKES 530
K + T KK S + K+++ F +P + KL+A+ ++K+
Sbjct: 726 KEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQE 785
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y PDT + LH++ +E KE L HSERLA+A+GLI+TP PL I KNLRVCGDCH I
Sbjct: 786 GYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVI 845
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I RE+++RD RFHHF G CSCGD+W
Sbjct: 846 KMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTD 330
G + + ++CG+ K++H ++ RGD+ + +++MY K S+ D
Sbjct: 98 GGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVD 157
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
R+VF+ M R++ +W ++ GY +G + ++LF +MR G+ PN TF +V S S
Sbjct: 158 GRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVAS 217
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
++ +H +S+K FG L+ + KCG + EA+
Sbjct: 218 QGMVDLGRRVHAQSVK--FGCCSTVFVCNSLMNMYAKCGLVEEAR 260
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G + + +EL +GV ++ F ++ + + + ++VH ++ +
Sbjct: 182 QDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ MY KCG + +AR VF M R M SW+ ++ G NG E LQLF R
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSI 301
Query: 374 LQPNEQTFLAVFSACG 389
+ T+ V C
Sbjct: 302 TMLTQSTYATVIKLCA 317
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
S + T+ +LC N K A+++H L+ + +++ Y K G + +A +F
Sbjct: 307 STYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLL 366
Query: 338 MA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M+ +++ SW MING NG LF +MR+ G+ PN+ T+ + +A
Sbjct: 367 MSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H +++ ++ ++ Y K + +A +F + + + SW M+ YA G
Sbjct: 425 QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAG 484
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
D +F +M GL+PNE T +V AC S A
Sbjct: 485 DSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 214/402 (53%), Gaps = 38/402 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G ++A+ L D+ VK D+ ++ C E +++H+ + + +
Sbjct: 280 QSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSN 339
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ + MY KCGS+ DAR FD + ++++ +W+ MI YA G G + + F +M
Sbjct: 340 ASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREM 399
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G+QP++ TF + S C + ++ +F M + + I+P EHY + +LG+ G
Sbjct: 400 IQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGR 459
Query: 430 LFEAQQFI-EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS--------- 479
L EA + + E +P P+ W +L R H ++++ + A + L+P
Sbjct: 460 LAEASKLVGEMPMPAGPS--IWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLS 517
Query: 480 ----------KADPKK--IPTPPPKKRTAISILD--GKSRLVEFRNPTLYRDDEK---LK 522
+ D + + + KK S ++ GK+ + + + + E L+
Sbjct: 518 NMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLE 577
Query: 523 AL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
AL +MK + Y PDT YVLHDI +E KE L+ HSE+LA+A+G+++TPA T LR+ KNLR
Sbjct: 578 ALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLR 637
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH A+ +S I GRE+IVRD RFHHFK G CSCGDYW
Sbjct: 638 ICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 34/177 (19%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH-------- 347
K VH L+ ++ DL + +I +YGKCG + DA +VFD+M R + SW+
Sbjct: 190 GKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTK 249
Query: 348 -----------------------LMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFL 382
MI+GY+ +GL + L LF++M K G++PN T +
Sbjct: 250 SGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIM 309
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+V AC +E + G++ + L + KCG L +A+ ++
Sbjct: 310 SVLPACAQLSTLERGR-QIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 365
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 216/402 (53%), Gaps = 39/402 (9%)
Query: 260 GKVKEAIELM---------DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
GK KEA++L + V+ + T+ CG E K VH Y + +
Sbjct: 173 GKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEI 232
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D+VL +I+MY KCGS+ A+RVF+ + + + + ++ MI A GL DE QLF +M
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Query: 370 RKL-GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ PN TF+ + AC I E +F+ M EFGI+P +HY +V + G+ G
Sbjct: 293 TTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
+ EA+ FI +P EP W +L + +R+ GDI + A + +++LDP
Sbjct: 353 LIKEAESFIAS-MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLS 411
Query: 479 -----------SKADPKKIPTPPPKKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-- 524
K ++ K S ++ + + EF ++ E++ A+
Sbjct: 412 NVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLD 471
Query: 525 ---NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+++E+ YV DT+ VL D++++ KE AL YHSE+LAIA+ L+ T TP+RIIKNLR
Sbjct: 472 EIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLR 531
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH +K++S++ RE++VRD RFHHF+DG CSC D+W
Sbjct: 532 ICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
++ CG+ + +A++V D + DL N V+ Y K G + DAR++FD M +R+
Sbjct: 106 MYSSCGDLR---SAQRVFD----DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERN 158
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMR-----KLGLQPNEQTFLAVFSACGSADAIEEA 397
+ SW +INGY G E L LF +M+ + ++PNE T V SACG A+E+
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 398 -FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
++H + E I GT L+ + KCG L A++
Sbjct: 219 KWVHAYIDKYHVEIDIVLGT----ALIDMYAKCGSLERAKR 255
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 214/402 (53%), Gaps = 38/402 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASC------FYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G ++A+ L D+ VK D+ ++ C E +++H+ + + +
Sbjct: 243 QSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSN 302
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ + MY KCGS+ DAR FD + ++++ +W+ MI YA G G + + F +M
Sbjct: 303 ASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREM 362
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G+QP++ TF + S C + ++ +F M + + I+P EHY + +LG+ G
Sbjct: 363 IQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGR 422
Query: 430 LFEAQQFI-EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS--------- 479
L EA + + E +P P+ W +L R H ++++ + A + L+P
Sbjct: 423 LAEASKLVGEMPMPAGPS--IWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLS 480
Query: 480 ----------KADPKK--IPTPPPKKRTAISILD--GKSRLVEFRNPTLYRDDEK---LK 522
+ D + + + KK S ++ GK+ + + + + E L+
Sbjct: 481 NMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLE 540
Query: 523 AL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
AL +MK + Y PDT YVLHDI +E KE L+ HSE+LA+A+G+++TPA T LR+ KNLR
Sbjct: 541 ALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLR 600
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+CGDCH A+ +S I GRE+IVRD RFHHFK G CSCGDYW
Sbjct: 601 ICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 34/177 (19%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH-------- 347
K VH L+ ++ DL + +I +YGKCG + DA +VFD+M R + SW+
Sbjct: 153 GKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTK 212
Query: 348 -----------------------LMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFL 382
MI+GY+ +GL + L LF++M K G++PN T +
Sbjct: 213 SGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIM 272
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+V AC +E + G++ + L + KCG L +A+ ++
Sbjct: 273 SVLPACAQLSTLERGR-QIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 328
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 207/392 (52%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EG ++ + GV+A+A F + C + +++H +++ + + + +
Sbjct: 257 EGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSL 316
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY +CG + D+ RV + + MI+ Y +G G + + LF+QM G +PNE
Sbjct: 317 VHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNE 376
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TFL + AC + +E FE M +G+ P +HY +V +LG+ G L EA+ I
Sbjct: 377 VTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLI- 435
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------------- 481
+P +P W+ L + + D+ + E +++LDP +
Sbjct: 436 LSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWE 495
Query: 482 DPKKIPTPP----PKKRTAISILDGKSRLVEF--RNPTLYRDDEKLKALNQM----KEST 531
D K+ +K +S ++ K ++ +F + + R E ++ L +M ++
Sbjct: 496 DVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCG 555
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y PD V HD++ E KE +L +HSE+LAIA+ +S P P+R++KNLRVC DCH AIK
Sbjct: 556 YAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIK 615
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+MS+++GRE++VRD RFHHFKDGKCSCGDYW
Sbjct: 616 LMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G++ D +LF C + + ++VH Y ++S + D+ + + + MY +CG + D
Sbjct: 168 EGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRD 227
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ ++ S + I+G NG + L+ F MR G++ N TF++ ++C
Sbjct: 228 GEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 287
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
A+ + IH ++K+ G+ LV + +CG L ++++
Sbjct: 288 LAALAQGQQIHALAIKT--GVDKVVPVMTSLVHMYSRCGCLGDSER 331
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 247 PPSVADLARLCQEGKVKEAI-ELMDKGVKADASCFYTLFELCGNPKWYENAKKVH----- 300
P D+ RLC G+VKEA+ +G+ ++ F +F C + +++H
Sbjct: 14 PNGREDIIRLCSTGRVKEALHRRFREGLWSEPGLFSHIFRAC---QALPLLRQLHAFAAT 70
Query: 301 -----DYFLQS-------------TIRG--------DLVLNNKVIEMYGKCGSMTDARRV 334
D F + T RG +++ N +I Y K G + AR++
Sbjct: 71 SGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKL 130
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADA 393
FD M R++ +W+ M+ G ++GL +E L F MR+ G+QP+E ++F C G D
Sbjct: 131 FDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDV 190
Query: 394 IEEAFIHFESMKS 406
+ +H ++S
Sbjct: 191 VSGRQVHAYVVRS 203
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 207/392 (52%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EG ++ + GV+A+A F + C + +++H +++ + + + +
Sbjct: 149 EGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSL 208
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY +CG + D+ RV + + MI+ Y +G G + + LF+QM G +PNE
Sbjct: 209 VHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNE 268
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TFL + AC + +E FE M +G+ P +HY +V +LG+ G L EA+ I
Sbjct: 269 VTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLI- 327
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------------- 481
+P +P W+ L + + D+ + E +++LDP +
Sbjct: 328 LSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWE 387
Query: 482 DPKKIPTPP----PKKRTAISILDGKSRLVEF--RNPTLYRDDEKLKALNQM----KEST 531
D K+ +K +S ++ K ++ +F + + R E ++ L +M ++
Sbjct: 388 DVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCG 447
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y PD V HD++ E KE +L +HSE+LAIA+ +S P P+R++KNLRVC DCH AIK
Sbjct: 448 YAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIK 507
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+MS+++GRE++VRD RFHHFKDGKCSCGDYW
Sbjct: 508 LMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G++ D +LF C + + ++VH Y ++S + D+ + + + MY +CG + D
Sbjct: 60 EGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRD 119
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ ++ S + I+G NG + L+ F MR G++ N TF++ ++C
Sbjct: 120 GEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 179
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
A+ + IH ++K+ G+ LV + +CG L ++++
Sbjct: 180 LAALAQGQQIHALAIKT--GVDKVVPVMTSLVHMYSRCGCLGDSER 223
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y K G + AR++FD M R++ +W+ M+ G ++GL +E L F MR+ G+Q
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 376 PNEQTFLAVFSAC-GSADAIEEAFIHFESMKS 406
P+E ++F C G D + +H ++S
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRS 95
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 207/386 (53%), Gaps = 31/386 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
IE MD GV F +L +++H +++ D ++N ++ MY +C
Sbjct: 441 IESMDVGVSTFT--FASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRC 498
Query: 326 GSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
G + DA R FD M D ++ SW +I+ A +G + L LF M G++PN+ T++AV
Sbjct: 499 GYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAV 558
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SAC ++E +F SM+ + + P EHY +V +L + G + EA +FI + +P +
Sbjct: 559 LSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINE-MPCK 617
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP-------------- 490
A W+ L R + +I++ + A ++DL+P P + +
Sbjct: 618 ADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIR 677
Query: 491 -------PKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTR 537
K T +S + + + EFR +P KL L ++K+ YVPDT
Sbjct: 678 SLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTS 737
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VLHD+ + KEQ LL HSE++A+A+GLI+T P+RI KNLRVC DCH+AIK +S+
Sbjct: 738 IVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKST 797
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GRE+I+RD+ RFH KDGKCSCG+YW
Sbjct: 798 GREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 30/258 (11%)
Query: 256 LCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPK-------WYENAKKVHDYFL 304
L + G +EA+ E+++ G++ +A F LC + + V + +
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNA------FTLCAAAHACFPGELFRSSGGTVLGFAI 174
Query: 305 QSTIRG-DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++ G D+ + +I+M+ + G + AR+VF+ + +R++ W LMI Y G + +
Sbjct: 175 KTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAV 234
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGISPGTEHYLGL 420
+LF M + G +P+ T ++ SAC GSA ++ S+ G+ T GL
Sbjct: 235 ELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQ----LHSLVLRLGLVSDTCVSCGL 290
Query: 421 VGVLGKC--GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
V + K E + + +++P + + Y + G E++A EL+ ++
Sbjct: 291 VDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQ---ENNAVELLCEMLN 347
Query: 479 SKADPKKIPTPPPKKRTA 496
+P + K A
Sbjct: 348 ESIEPNHLTYSSLLKACA 365
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 296 AKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGY 353
+ +H L + + D ++ N ++ MY KCG + ARRVFD M R + SW M
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG E L L +M + GL+PN T A AC
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC 156
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 253 LARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R Q G +A+EL ++ G + D ++ C +++H L+ +
Sbjct: 221 ITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGL 280
Query: 309 RGDLVLNNKVIEMYGKCG---SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE--GL 363
D ++ +++MY K SM AR+VF M ++ SW +I+GY G G E +
Sbjct: 281 VSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCG-GQENNAV 339
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLG--L 420
+L +M ++PN T+ ++ AC + +D IH MK+ S G + +G L
Sbjct: 340 ELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKT----SIGNVNVVGNAL 395
Query: 421 VGVLGKCGHLFEAQQFIEQ 439
V + + G + EA++ +Q
Sbjct: 396 VSMYAESGCMEEARKAFDQ 414
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 205/379 (54%), Gaps = 29/379 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K D+ + C + E K++H Y L++ D + N ++++Y KCG + AR
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+FD + + + SW +MI GY +G G+E + F +MR G++P+E +F+++ AC +
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+E+ + F MK++F I P EHY +V +L + G+L +A +FIE LP P A W A
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIET-LPIAPDATIWGA 606
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTPPP 491
L R + DI+L + E + +L+P K +KI
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 492 KKRTAISILD--GKSRLVEFRNPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDID 544
+K S ++ GK L N + + + +++L +MKE + P T+Y L + D
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINAD 726
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+ KE AL HSE+LA+A+GL++ P R +R+ KNLRVCGDCH K MS+ RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D RFHHFKDG CSC +W
Sbjct: 787 DPNRFHHFKDGYCSCRGFW 805
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 60/284 (21%)
Query: 251 ADLARLCQEGKVKEAIEL--MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
A + CQ G ++ A+EL M K + + + ++ +LC K + + KKVH +++
Sbjct: 71 AKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSV 130
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHM------------------------------ 338
D L K++ Y CG + + RRVFD M
Sbjct: 131 GVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 339 ---------------------ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
DR + SW+ MI+GY NGL + GL +++QM LG+ +
Sbjct: 191 MVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 250
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T ++V C ++ + +H ++KS F + L+ + KCG L A +
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSN--TLLDMYSKCGDLDGALRV 308
Query: 437 IEQKLPFEPTAEFWEALRNY---ARIHGDIDLEDHAEELMVDLD 477
E K+ + + Y R G I L E+ V LD
Sbjct: 309 FE-KMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLD 351
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M G+ D + ++ C N K VH ++S+ + +N +++MY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A RVF+ M +R++ SW MI GY +G D ++L +QM K G++ + ++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 387 ACGSADAIEEA-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
AC + +++ +I +M+S + L+ + KCG +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCN------ALMDMYAKCGSM 403
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAK 297
G++ + + +A ++G+ AI+L+ +GVK D ++ C +N K
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VHDY + + +L + N +++MY KCGSM A VF M + + SW+ MI
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------ 426
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH 416
L+P+ +T V AC S A+E IH +++ G S
Sbjct: 427 ---------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRN--GYSSDRHV 469
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG L A+ + +P + + + Y +HG
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDM-IPSKDLVSWTVMIAGYG-MHG 512
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 244/498 (48%), Gaps = 72/498 (14%)
Query: 174 PHQQQPHSNQYQNPGNQNFQ--------QPRSPNQWNNQQNQGY-----PQARNSYQQVS 220
P Q + Y + GN F QP P+ WN+ N + ARN + V
Sbjct: 99 PFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPS-WNSIINANFQAGLVDMARNLFA-VM 156
Query: 221 PGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK-------GV 273
P + + + + N +C G+ KEA+ L + V
Sbjct: 157 PERNVISW-SCMINGYVRC--------------------GQYKEALALFREMQMLGVNDV 195
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+ + + CG E+ K H Y + + D+VL +I+MY KCGS+ A
Sbjct: 196 RPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATW 255
Query: 334 VFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF ++ ++ + +W MI+G A +GL +E + LF +M G++PN TFLAVF AC
Sbjct: 256 VFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGG 315
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ E + M ++ I P +HY +V + G+ G + EA + + +P EP W A
Sbjct: 316 LVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVV-KSMPMEPDVLVWGA 374
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI----PTPPP 491
L + +R+HGDI+ + A + +++L+P+ + D + + T
Sbjct: 375 LLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGI 434
Query: 492 KKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVLHDIDQ 545
KK S+++ L EF +P + L+ L ++K YV +T+ VL D+D+
Sbjct: 435 KKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDE 494
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
E KE AL HSE+LA+AYG + T TP+RI+KNLR+C DCH AIK++S++ RE+IVRD
Sbjct: 495 EGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRD 554
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHF G CSC DYW
Sbjct: 555 CNRFHHFTQGLCSCRDYW 572
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 42/227 (18%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ D F L + +P + VH L+ + D + +I MY CG++ A
Sbjct: 59 GVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFA 118
Query: 332 RRVFDH-------------------------------MADRSMDSWHLMINGYADNGLGD 360
R+VFD M +R++ SW MINGY G
Sbjct: 119 RQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYK 178
Query: 361 EGLQLFEQMRKLG---LQPNEQTFLAVFSACGSADAIEE---AFIHFESMKSEFGISPGT 414
E L LF +M+ LG ++PNE T V +ACG A+E A + + + GT
Sbjct: 179 EALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGT 238
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + E ++ L W A+ + +HG
Sbjct: 239 ----ALIDMYAKCGSV-EKATWVFSNLGPNKDVMAWSAMISGLAMHG 280
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 216/378 (57%), Gaps = 32/378 (8%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F + C + E ++H + ++S + D+V+ + +++MY KCG + A +VF
Sbjct: 679 DCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVF 738
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ M+ ++ SW+ MI+GYA +GLG++ L++FE+M++ G P+ TF++V SAC A ++
Sbjct: 739 NSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVD 798
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
+FE M+ + GI P EHY ++ +LG+ G L + Q++I ++P +P W +
Sbjct: 799 RGLDYFEMME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYI-NRMPMKPNTLIWRTVLV 856
Query: 456 YARIHGD---IDLEDHAEELMVDLDP---------------------SKADPKKIPTPPP 491
R D IDL A ++++L+P + +
Sbjct: 857 ACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAM 916
Query: 492 KKRTA---ISILDGKSRLV--EFRNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQ 545
KK +++ DG + + +P EKL L Q +K + YVP T + L+D+++
Sbjct: 917 KKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEE 976
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
E KE+ L YHSE+LA+A+ L + + P+RI+KNLRVCGDCH A + +S+IV R++I+RD
Sbjct: 977 ENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRD 1036
Query: 606 NKRFHHFKDGKCSCGDYW 623
+ RFHHF+DGKCSCGDYW
Sbjct: 1037 SIRFHHFEDGKCSCGDYW 1054
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H ++ + DL L+N ++ +Y K + AR+VFD M +R+ SW +++GY +
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 357 GLGDEGLQLFEQMRKLGLQ---PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP 412
G+ DE ++F+ M G + P TF +V AC A AF + + S+ +
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 413 GTEHYLGLVGVLGKC--GHLFEAQQFIEQKLPFEPTAEF--WEALRN-YAR 458
T L+ + G C G +AQQ + P + W AL + YA+
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTT----PVRDLITWNALMSVYAK 242
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + ++VH ++ + D ++N +++MYG CG+ +++ +F+ MA+ + SW
Sbjct: 486 CASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSW 545
Query: 347 H----LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ +M++ +A E +++F M + GL PN+ TF+ + SA +E
Sbjct: 546 NSIMGVMVSSHAPTA---ESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLE 595
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 296 AKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
++VH + L++ I + L+N ++ MY KCG++ A RVF + R SW+ +I+
Sbjct: 393 GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLD 452
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPG 413
NG + + + MR+ + P+ ++ S+C S + +H +++K +G+
Sbjct: 453 QNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVK--WGLDLD 510
Query: 414 TEHYLGLVGVLGKCG 428
T LV + G CG
Sbjct: 511 TSVSNALVKMYGDCG 525
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 25/243 (10%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M G+ + F L E K+VH L+ D ++N ++ Y K G
Sbjct: 569 MMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGD 628
Query: 328 MTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M ++F M+ R SW+ MI+GY NG E + M + TF V +
Sbjct: 629 MDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLN 688
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL-FEAQQF--IEQKLP 442
AC S A+E +H ++S+ E L+ + KCG + + ++ F + QK
Sbjct: 689 ACASVAALERGMEMHAFGIRSQLESDVVVES--ALLDMYSKCGRIDYASKVFNSMSQKNE 746
Query: 443 FEPTAEFWEAL-RNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
F W ++ YAR HG L + A E+ ++ + A P + T +S+L
Sbjct: 747 FS-----WNSMISGYAR-HG---LGEKALEIFEEMQRNGACPDHV--------TFVSVLS 789
Query: 502 GKS 504
S
Sbjct: 790 ACS 792
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 17/174 (9%)
Query: 280 FYTLFELC--GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC--GSMTDARRVF 335
F ++ C P A +VH ++ + + N +I MYG C G A++VF
Sbjct: 163 FGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVF 222
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM----RKLGLQPNEQTFLAVFSACG-- 389
D R + +W+ +++ YA G LF M + L+PNE TF ++ +A
Sbjct: 223 DTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLS 282
Query: 390 --SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ-FIEQK 440
S+ +++ F S + G+ LV + G L EA+ FI K
Sbjct: 283 SCSSGVLDQVFARVLKSGSSSDLYVGS----ALVSAFARHGMLDEAKDIFINLK 332
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 217/399 (54%), Gaps = 34/399 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA++L +G+ +++ + ++ + K+VH + L+S +V
Sbjct: 269 QMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVV 328
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+MY KCG++ ARR+FD M +R+ SW+ M+ GY+ +G+ E L+LF+ MR+
Sbjct: 329 LLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN 388
Query: 374 -LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++P+ T+LAV S C + I + + + GI P HY +V +LG+ G +
Sbjct: 389 KVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE 448
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD--------- 482
EA FI +K+PF PTA W +L R+H D+++ + +++L+P A
Sbjct: 449 EAFDFI-KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLY 507
Query: 483 -----------------PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALN 525
K + P + + + + +P +K+K L+
Sbjct: 508 ASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELS 567
Query: 526 -QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ KE YVPD VL+D+D+E KE+ LL HSE+LA+A+GLI+TP T +R+IKNLR+C
Sbjct: 568 IKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICV 627
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ K +SR+ R +I+RD RFH+ G CSCGDYW
Sbjct: 628 DCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 252 DLARLCQEGKVKEAI---ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+L LC G++KEA+ ++ + VK + + T+ C + + ++VH + +++
Sbjct: 64 NLKTLCSSGQLKEALLQMAILGREVKFEG--YDTILNECVSQRAIREGQRVHTHMIKTCY 121
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ L ++I +Y KC + DAR +FD M +++ SW MI+ Y+ G E L LF +
Sbjct: 122 LPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVE 181
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
M + +PN TF + ++C
Sbjct: 182 MLRSDTEPNHFTFATILTSC 201
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ L + +++D F T+ C +E +++H ++ +
Sbjct: 168 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 227
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY K G + DA VF + +R + + +I+GYA GL +E L+LF Q++ G
Sbjct: 228 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 287
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL----GLVGVLGKCG 428
+ N T+ +V +A A+ +H ++S G Y+ L+ + KCG
Sbjct: 288 MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS------GQYSYVVLLNSLIDMYSKCG 341
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++ A++ + +P E T W A+ HG
Sbjct: 342 NVCYARRIFDS-MP-ERTCISWNAMLVGYSKHG 372
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 204/385 (52%), Gaps = 29/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
E+ D G D + +C E+AK+ H ++ D+V N +++ Y K
Sbjct: 309 FEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKW 368
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G M DAR VF+ M +++ SW+ +I GY ++G G E +++FEQM + G+ P TFLAV
Sbjct: 369 GRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVL 428
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC + + + F SMK + + P HY ++ +LG+ L EA I PF+P
Sbjct: 429 SACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTA-PFKP 487
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------DPKKIPTPP---- 490
TA W AL R+H +++L A E + ++P K K+
Sbjct: 488 TANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQ 547
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDDEKL---------KALNQMKEST---YVPDTRY 538
K+ + +L S + + P + +K K N M E Y +
Sbjct: 548 TLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENET 607
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
+L D+D+E +++ L YHSE+LAIA+GLI+TP TPL+I + RVCGDCH+AIK+++ + G
Sbjct: 608 LLPDVDEE-EQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTG 666
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD RFHHF++G CSCGDYW
Sbjct: 667 REIVVRDASRFHHFRNGSCSCGDYW 691
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 264 EAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
E +EL G AS + L C + K+V +Y + S DL + N+V+ M+
Sbjct: 105 EILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHV 164
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG M DAR++FD M ++ + SW M+ G D G E +LF M K +TF
Sbjct: 165 KCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFAT 224
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQK 440
+ A ++ IH ++K G +H++ L+ + KCG + +A +Q
Sbjct: 225 MIRASAGLGLVQVGKQIHSCALKR----GVGDDHFVSCALIDMYSKCGSIEDAHCVFDQ- 279
Query: 441 LPFEPTAEFWEALRNYARIHG 461
+P E T W ++ +HG
Sbjct: 280 MP-EKTTVGWNSIIASYALHG 299
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F T+ + K++H L+ + D ++ +I+MY KCGS+ DA VFD M
Sbjct: 222 FATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMP 281
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+++ W+ +I YA +G +E L L+ +MR G + T V C ++E A
Sbjct: 282 EKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHA 339
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 204/398 (51%), Gaps = 38/398 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+EG ++ +E+ G+ + + ++ C + H Y + D ++ N
Sbjct: 408 EEG-LRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNA 466
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I+MY KCG + AR+VFD M R + SW+ MI Y +G+G E L LF+ M+ GL+P+
Sbjct: 467 LIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPD 526
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TF+ + SAC + + E F +M +FGI P EHY +V +L + G E FI
Sbjct: 527 DVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFI 586
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------------- 481
E K+P EP W AL + R++ +++L + + + L P
Sbjct: 587 E-KMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRW 645
Query: 482 -DPKKI---------PTPPPKKRTAIS-----ILDGKSRLVEFRNPTLYRDDEKL-KALN 525
D ++ P IS L G R +P L + KL + L
Sbjct: 646 DDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYR----SHPQLTQISNKLDELLV 701
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+MK Y ++ YV D+++E KE+ LLYHSE+LAIA+G++S + + KNLRVCGD
Sbjct: 702 EMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGD 761
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK +S + R++ VRD RFHHFKDG C+CGD+W
Sbjct: 762 CHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 262 VKEAIELM-------DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
++EA+EL D + A T+ +C N +H Y ++S DL++
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N ++ MY KCG + A R F+ M R S+ +I+GY NG +EGL++F +M+ G+
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG----TEHYLGLVGVLGKCGHL 430
P + T +V AC A +H+ S + I G T L+ + KCG +
Sbjct: 423 NPEKATLASVLPACAHL-----AGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKI 477
Query: 431 FEAQQFIEQ 439
A++ ++
Sbjct: 478 DTARKVFDR 486
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRG-DLVLNN------KVIEMYGKCGSMTDARRV 334
L E C K K +H + L+ R + L N K++++Y C + AR V
Sbjct: 14 VLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHV 73
Query: 335 FDHMADR--SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA- 391
FD M R ++ W+L+I YA NG +E + L+ +M G+ PN TF V AC +
Sbjct: 74 FDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALK 133
Query: 392 DAIEEAFIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+A E IH + ++ E + T LV KCG L +A++ ++
Sbjct: 134 EASEGREIHCDIKRLRLESNVYVST----ALVDFYAKCGCLDDAKEVFDK 179
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +EAI+L K G+ + F + + C K +++H + + ++ ++
Sbjct: 98 GPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVS 157
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA-DNGLGDEGLQLFEQMRKLGL 374
+++ Y KCG + DA+ VFD M R + +W+ MI+G++ G DE +L QM+ +
Sbjct: 158 TALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DV 216
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF--GISPGTEHYLGLVGVLGKC 427
PN T + V A +++ IH ++ F + GT G++ V GKC
Sbjct: 217 SPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGT----GILDVYGKC 268
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGY 353
+ K++H + ++ GD+V+ ++++YGKC + ARR+FD M ++ +W M+ Y
Sbjct: 238 HGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAY 297
Query: 354 ADNGLGDEGLQLFEQMRKLG---LQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFG 409
E L+LF Q+ L + + T V C + D +H ++KS F
Sbjct: 298 VVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFV 357
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+ + L+ + KCG + A +F + + F + Y +
Sbjct: 358 LDLMVGN--TLLSMYAKCGIINGAMRFFNE-MDLRDAVSFTAIISGYVQ 403
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 202/365 (55%), Gaps = 29/365 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDS 345
CG E+ K H Y + + D+VL +I+MY KCGS+ A VF ++ ++ + +
Sbjct: 178 CGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMA 237
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
W MI+G A +GL +E + LF +M G++PN TFLAVF AC + E + M
Sbjct: 238 WSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMT 297
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
++ I P +HY +V + G+ G + EA + + +P EP W AL + +R+HGDI+
Sbjct: 298 EDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVV-KSMPMEPDVLVWGALLSGSRMHGDIET 356
Query: 466 EDHAEELMVDLDPSKA-----------------DPKKI----PTPPPKKRTAISILDGKS 504
+ A + +++L+P+ + D + + T KK S+++
Sbjct: 357 CELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGG 416
Query: 505 RLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSER 558
L EF +P + L+ L ++K YV +T+ VL D+D+E KE AL HSE+
Sbjct: 417 VLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEK 476
Query: 559 LAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
LA+AYG + T TP+RI+KNLR+C DCH AIK++S++ RE+IVRD RFHHF G CS
Sbjct: 477 LALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCS 536
Query: 619 CGDYW 623
C DYW
Sbjct: 537 CRDYW 541
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ D F L + +P + VH L+ + D + +I MY G + A
Sbjct: 59 GVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMA 118
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG---LQPNEQTFLAVFSAC 388
R +F M +R++ SW MINGY G E L LF +M+ LG ++PNE T V +AC
Sbjct: 119 RNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAAC 178
Query: 389 GSADAIEE---AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
G A+E A + + + GT L+ + KCG + E ++ L
Sbjct: 179 GRLGALEHGKWAHAYIDKCGMPVDVVLGT----ALIDMYAKCGSV-EKATWVFSNLGPNK 233
Query: 446 TAEFWEALRNYARIHG 461
W A+ + +HG
Sbjct: 234 DVMAWSAMISGLAMHG 249
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 213/386 (55%), Gaps = 45/386 (11%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEMYG 323
L K V D + TLF C + A K+ D + T++ L+LN N I MY
Sbjct: 485 LSQKDVTPDWVTYVTLFRGCADI----GANKLGDQIIGHTVKAGLILNVSVANAAITMYS 540
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG +++A+++FD + + + SW+ MI GY+ +G+G + + F+ M G +P+ +++A
Sbjct: 541 KCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 600
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
V S C + ++E ++F+ M GISPG EH+ +V +LG+ GHL EA+ I+ K+P
Sbjct: 601 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID-KMPM 659
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP---- 483
+PTAE W AL + +IHG+ +L + A + + +L D K+D
Sbjct: 660 KPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQV 719
Query: 484 -KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD----EKLKALNQMKEST-YVPDTR 537
K + KK S ++ ++++ F+ DD + + N+M E +
Sbjct: 720 RKLMRDKGIKKNPGYSWMEVENKVHVFKA-----DDVSHPQVIAIRNKMDELMEKIAHLG 774
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YV + ++ ++HSE+LA+A+G++S PA P+ I+KNLR+CGDCH IK++S +
Sbjct: 775 YV-----RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVT 829
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE ++RD RFHHFK G CSCGDYW
Sbjct: 830 DREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 253 LARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L Q G+V+EA +E+ KGV+ D++ + + C K++H ++S
Sbjct: 232 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 291
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D + + +IE+Y KCGS +A+RVF+ + DR+ SW ++I G + ++LF Q
Sbjct: 292 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ 351
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
MR + ++ + S C
Sbjct: 352 MRAELMAIDQFALATLISGC 371
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
TL C N +++H L+S +V++N +I +Y KCG + +A VF M++R
Sbjct: 366 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 425
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW MI Y+ G + + F+ M N T+ A+ A A E+ +
Sbjct: 426 DIVSWTSMITAYSQIGNIIKAREFFDGMA----TRNAITWNAMLGAYIQHGAEEDGLKMY 481
Query: 402 ESMKSEFGISPGTEHYLGL 420
+M S+ ++P Y+ L
Sbjct: 482 SAMLSQKDVTPDWVTYVTL 500
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFE----------LCGNPKWYENAKKVHDYFLQST 307
++G + +A EL D+ + D + + TL CG E A ++ F +
Sbjct: 99 KQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFD 158
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVF------------------------DH------ 337
GD + +++M+ +CG + A R+F DH
Sbjct: 159 FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 218
Query: 338 -MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
MA+R + SW++MI + +G E L L +M + G++ + T+ + +AC ++
Sbjct: 219 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW 278
Query: 397 AF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+H + ++S I P L+ + KCG EA++
Sbjct: 279 GKQLHAKVIRSLPQIDPYVAS--ALIELYAKCGSFKEAKR 316
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF-DHMADRSMDS 345
CG+ A+ +H + + + L N ++ Y CG+++DARR+ + + ++ +
Sbjct: 30 CGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVIT 89
Query: 346 WHLMINGYADNGLGDEGLQLFEQM--RKLG----LQPNEQTFLAVFSACGSADAIEEA-- 397
++M+NGYA G + +LF++M R + L + + +CG+ E A
Sbjct: 90 HNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQ 149
Query: 398 ----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL-FEAQQF--IEQKLPFEPTAEFW 450
F F +F P E LV + +CG++ F ++ F IE+ F +
Sbjct: 150 LLGLFWKF-----DFWGDPDVET--ALVDMFVRCGYVDFASRLFSQIERPTIFCRNS--- 199
Query: 451 EALRNYARIHGDIDLEDHAEELMVDL 476
L YA+++G DHA E D+
Sbjct: 200 -MLAGYAKLYG----IDHAIEYFEDM 220
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 208/397 (52%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + +EA+ E+ V + ++ C E K VH Y + + ++
Sbjct: 350 QSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVI 409
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L +++ Y KCG + DA + F+ M R+ +W +I G A NG E L+LF M +
Sbjct: 410 LGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEAN 469
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P + TF+ V AC +EE HF SM ++GI P EHY +V +LG+ G + EA
Sbjct: 470 IEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEA 529
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
QFI + +P EP A W AL + +H ++++ + A + +V LDP +
Sbjct: 530 YQFI-RNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYAS 588
Query: 483 ----------PKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL-KALNQ 526
K++ +K S+++ + + EF +P L EK+ + +
Sbjct: 589 VGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIEN 648
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K Y+P+T D+D+ K+ ++ +HSE+LAIA+GL+ + +R+ KNLRVC DC
Sbjct: 649 IKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDC 708
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A K++S++ RE+IVRD RFHHFKDG CSC DYW
Sbjct: 709 HSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDKG---VKA--DASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A +A + G KE +E M KG V+A D ++ CG + + +Y +
Sbjct: 242 AMIAGYVKNGDWKEVVE-MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEE 300
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ L +++MY KCG + ARR+FD M R + +W MI+GY + E L +
Sbjct: 301 KGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAI 360
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVG 422
F +M+ + PN+ T ++V SAC A+E ++H + + ++ GT LV
Sbjct: 361 FNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT----ALVD 416
Query: 423 VLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG + +A + E +P T W AL
Sbjct: 417 FYAKCGCIKDAVKAFES-MPVRNTWT-WTAL 445
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ V Y + D + N +I MY CG + A +F + + + +W+ MI GY N
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTE 415
G E +++F+ M ++ +E T L+V +ACG DA +I E G+
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWI--AEYAEEKGMLRSRN 308
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
LV + KCG L +A++ ++ + A W A+
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVA--WSAM 344
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/420 (35%), Positives = 212/420 (50%), Gaps = 36/420 (8%)
Query: 239 CPAGDQVLPPSVADLARLCQ----EGKVKEAIEL----MDKGVKADASCFYTLFELCGNP 290
C D +L + + + Q G KEA++L +++G + D + C
Sbjct: 201 CSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARL 260
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMI 350
E + ++ G+ VL +I+MY KCG M A VF M + + W+ I
Sbjct: 261 GALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAI 320
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
+G A +G LF QM K G++P+ TF+ + AC A ++E +F SM+ F +
Sbjct: 321 SGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTL 380
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAE 470
+P EHY +V +LG+ G L EA Q + + +P E A W AL R+H D L +
Sbjct: 381 TPEIEHYGCMVDLLGRAGFLDEAHQLV-KSMPMEANAIVWGALLGGCRLHRDTQLVEGVL 439
Query: 471 ELMVDLDPSKA-----------------DPKKIPTPPP----KKRTAISILDGKSRLVEF 509
+ ++ L+PS + D KI + KK S ++ + EF
Sbjct: 440 KQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEF 499
Query: 510 R-NPTLYRDDEKLKA-----LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAY 563
T + EK+ A + +K S YVP T YVL DI++E KE + HSE+LAIA+
Sbjct: 500 LVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAF 559
Query: 564 GLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GLIST +R++KNLRVCGDCH AIK +SR GRE+IVRDN RFH F DG CSC DYW
Sbjct: 560 GLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 42/175 (24%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+E+IE+ +G+ D+ F L + C + K+H +++ D +N +
Sbjct: 90 QESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSL 149
Query: 319 IEMYGKCGSMTDA-----------------------------------RR---VFDHMAD 340
+ +YGKCG + +A RR VFD M +
Sbjct: 150 VSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLE 209
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ + SW MI GYA NGL E L LF +M G +P+ + V AC A+E
Sbjct: 210 KDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALE 264
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K VH L+ + D L NKV+ G+ + R+F + ++ ++ MI+G N
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
E ++++ MRK GL P+ TF + AC A ++ I + + G
Sbjct: 87 DSFQESIEIYHSMRKEGLSPDSFTFPFLLKAC--ARLLDSKLGIKLHGLVVKAGCESDAF 144
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
LV + GKCG + A + + +P E W A+
Sbjct: 145 VNTSLVSLYGKCGFIDNAFKVFDD-IP-EKNVAAWTAI 180
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 216/399 (54%), Gaps = 34/399 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA++L +G+ +++ + ++ + K+VH + L+S +V
Sbjct: 241 QMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVV 300
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+MY KCG++ ARR+FD M +R+ SW+ M+ GY+ +G+ E L+LF+ MR+
Sbjct: 301 LLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN 360
Query: 374 -LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++P+ T+LAV S C + I + + + GI P HY +V +LG+ G +
Sbjct: 361 KVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE 420
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD--------- 482
EA FI +K+PF PTA W +L R+H D+++ + +++L+P A
Sbjct: 421 EAFDFI-KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLY 479
Query: 483 -----------------PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALN 525
K + P + + + + +P K+K L+
Sbjct: 480 ASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELS 539
Query: 526 -QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ KE YVPD VL+D+D+E KE+ LL HSE+LA+A+GLI+TP T +R+IKNLR+C
Sbjct: 540 IKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICV 599
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ K +SR+ R +I+RD RFH+ G CSCGDYW
Sbjct: 600 DCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 252 DLARLCQEGKVKEAI---ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+L LC G++KEA+ ++ + VK + + ++ C + + ++VH + +++
Sbjct: 36 NLKTLCSSGQLKEALLQMAILGREVKFEG--YDSILNECVSQRAIREGQRVHTHMIKTCY 93
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ L ++I +Y KC + DAR +FD M R++ SW MI+ Y+ G E L LF +
Sbjct: 94 LPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVE 153
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
M + +PN TF + ++C
Sbjct: 154 MLRSDTEPNHFTFATILTSC 173
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 258 QEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA+ L + +++D F T+ C +E +++H ++ +
Sbjct: 140 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 199
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY K G + DA VF + +R + + +I+GYA GL +E L+LF Q++ G
Sbjct: 200 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 259
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL----GLVGVLGKCG 428
+ N T+ +V +A A+ +H ++S G Y+ L+ + KCG
Sbjct: 260 MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS------GQYSYVVLLNSLIDMYSKCG 313
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
++ A++ + +P E T W A+
Sbjct: 314 NVCYARRIFDS-MP-ERTCISWNAM 336
>gi|413921338|gb|AFW61270.1| hypothetical protein ZEAMMB73_216321 [Zea mays]
Length = 687
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 213/404 (52%), Gaps = 36/404 (8%)
Query: 253 LARLCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA G +EA+EL K V D F T+ + E+AK+ H +Q +
Sbjct: 287 LAAYVLHGHSEEALELYQKMCSTHVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGL 346
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+V N ++++Y K G M DAR VF+ M R++ SW+ +I GY +G+GD+ +++FE+
Sbjct: 347 PLDIVGNTALVDLYCKWGRMEDARNVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFER 406
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ G PN TFLAV +AC + ++E F+ M I P HY ++ + G+ G
Sbjct: 407 LIAEGAVPNHVTFLAVLNACRFSGLVDEGKRIFQLMTENLRIKPRAMHYACVIELFGREG 466
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI-- 486
L E+ I ++ PF PTA W AL +RIH + L + E ++ ++P K + +
Sbjct: 467 LLDESYSMI-RRAPFTPTANMWGALLTASRIHKSMHLAKFSAEQLLAMEPEKINSYVVLL 525
Query: 487 -------------PTPPPKKRTAISILDGKSRLVE-------FRNPTL-------YRDDE 519
KR + I + S + F TL YR +
Sbjct: 526 NLYVSSGRQDSACKVVETLKRKGLYIGNACSWITVKKTDHRFFFKDTLHPQSAEIYRRLD 585
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
L + +++E+ +V + +L DI + ++ + YHSERLAIA+GLIST +TPLRI ++
Sbjct: 586 TL--MKEVREAGFVAEENELLPDIHPDEQKISRAYHSERLAIAFGLISTAPQTPLRISQS 643
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
R+C DCHN IK +SR+ RE+IVRD RFHHFK G CSCGDYW
Sbjct: 644 HRLCSDCHNLIKFVSRVTKREIIVRDGSRFHHFKLGVCSCGDYW 687
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM- 369
DL +N V+ MY +CG + +AR+ FD M DR+ +W +M+ G D G L LF +M
Sbjct: 140 DLYTHNHVLRMYLECGMLAEARQAFDGMPDRNGVTWGIMMGGLVDRGRPRAALALFREMW 199
Query: 370 -RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL--GLVGVLGK 426
G P +AV +A S A +H +K+ + YL L+ + K
Sbjct: 200 AEAGGDAPPRSLVVAVRAAASSGSARAGRQLHCCVVKAG-ACGDVADRYLTCALLDMYSK 258
Query: 427 CGHLFEAQQFIE-QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
CG + EA++ + P T W ++ +HG H+EE +
Sbjct: 259 CGRIDEARRVFDGLPRPHRTTVVAWNSMLAAYVLHG------HSEEAL 300
>gi|15226292|ref|NP_180984.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75330956|sp|Q8S8Q7.1|PP183_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g34370, mitochondrial; Flags: Precursor
gi|20197161|gb|AAM14949.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|67633584|gb|AAY78716.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253871|gb|AEC08965.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 469
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 234/489 (47%), Gaps = 61/489 (12%)
Query: 161 YQGQRSPNQGQVYPHQQQPHSNQYQNPGNQNFQQPRSPNQWNNQQNQGYPQAR--NSYQQ 218
Y + + + + Q H N + Q + W QN+ + Q R +SY Q
Sbjct: 16 YLWSATQTTSRCFNSRAQSH-NLITKTITSSLQDVLTRPIW---QNRSFVQCRRVSSYAQ 71
Query: 219 VSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMD----KGVK 274
+ HQ ++ LC++ K++EA+E++D KG
Sbjct: 72 MVNNHQ----------------------SVTIETFDALCKQVKIREALEVIDILEDKGYI 109
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
D L +LCG + E A+ VHD R + VIEMY C S DA V
Sbjct: 110 VDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS----YHTVIEMYSGCRSTDDALNV 165
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F+ M R+ ++W MI A NG G+ + +F + + G +P+++ F AVF AC S I
Sbjct: 166 FNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
E +HFESM ++G+ E Y+ ++ +L CGHL EA F+E ++ EP+ E WE L
Sbjct: 226 NEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVE-RMTVEPSVEMWETLM 284
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTL 514
N + G ++L D EL+ LD S+ + K + +L E R +
Sbjct: 285 NLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASD----SAMEKLKELRYCQM 340
Query: 515 YRDDEK-------------------LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLY 554
RDD K ++L QM + +VP TR +++E KE+ LL+
Sbjct: 341 IRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLF 400
Query: 555 HSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKD 614
S +LA A+ +I++ AR PL +++N+R C D HN K++S I GR LI RD K++H +K+
Sbjct: 401 RSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKN 460
Query: 615 GKCSCGDYW 623
G CSC DYW
Sbjct: 461 GVCSCKDYW 469
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 201/371 (54%), Gaps = 28/371 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++ C E K VH Y + + +L +++ Y KCG + DA F+ M
Sbjct: 325 MVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMP 384
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
++ +W +I G A NG G E L+LF MR+ G++P + TF+ V AC + +EE
Sbjct: 385 VKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRR 444
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
HF+SM ++GI P EHY +V +LG+ G + EA QFI + +P EP A W AL + +
Sbjct: 445 HFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFI-RTMPIEPNAVIWRALLSSCAV 503
Query: 460 HGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAIS 498
H ++ + + A + ++ L+PS + K++ +K S
Sbjct: 504 HRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCS 563
Query: 499 ILDGKSRLVEF-----RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+++ + EF +P L +K+ + + ++K + YVP+T V ++++ KE ++
Sbjct: 564 LIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSV 623
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF 612
+HSE+LAIA+GL+ +R+ KNLRVC DCH+A K++S++ RE++VRD FHHF
Sbjct: 624 SHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHF 683
Query: 613 KDGKCSCGDYW 623
KDG CSC DYW
Sbjct: 684 KDGTCSCNDYW 694
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 251 ADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + G E +E+ ++ GV D ++ CG + K V + +
Sbjct: 191 AIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEE 250
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + L +++MY KCG + ARR+FD M R + +W MI+GY E L LF
Sbjct: 251 GLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLF 310
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M+ ++PN+ T ++V SAC A+E ++H + ++ T LV
Sbjct: 311 SEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLT--TILGTALVDFYA 368
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG + +A + E +P + + W AL
Sbjct: 369 KCGCIDDAVEAFES-MPVKNSWT-WTAL 394
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + V Y ++ + D + + +I MY CG + AR VFD + + W
Sbjct: 130 CSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMW 189
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMK 405
+ ++ Y NG E +++F+ M ++G+ +E T ++V +ACG DA ++
Sbjct: 190 NAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWV--AGHV 247
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
E G++ + L+ + KCG + +A++ +
Sbjct: 248 DEEGLARNPKLVTALMDMYAKCGEIGKARRLFD 280
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 202/387 (52%), Gaps = 32/387 (8%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
I + G+ +D + +L C N + A+ VH Y L + G+L + ++++Y K
Sbjct: 230 IMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKL 289
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G+++D+ +VF M + +W M++ YA +G G E ++ FE M + G+ P+ TF +
Sbjct: 290 GTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLL 349
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC + +EE +F+ M +G+ EHY +V +LG+ GHL +A + I + +P EP
Sbjct: 350 SACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLI-KSMPMEP 408
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----DPKKIPTPPPKKRTAISILD 501
+ W AL R+ G+I+L E + LDPS + + + + R A +
Sbjct: 409 NSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRA 468
Query: 502 GKSRLVEFRNPT-------------------------LYRDDEKLKALNQMKESTYVPDT 536
V RNP +Y E+L N +E + T
Sbjct: 469 LMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKN--REVGFASKT 526
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
YVLHD+D+E KE + HSE+LAIA+GL+ T A PL I KN+R+CGDCH K++S I
Sbjct: 527 EYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLI 586
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD KRFHHF +G CSCGDYW
Sbjct: 587 EKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 63/119 (52%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ G+K + + C + K +H ++S + ++ + N +I +YGKCG +
Sbjct: 133 EMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLE 192
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A +F+ M+ +S+ SW+ M+ + GL ++G+ F MR+ G+ ++ T +++ AC
Sbjct: 193 AACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLAC 251
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V + S T C + + + +H ++S + ++++ Y + G DA
Sbjct: 37 VDSLVSALITAISTCSSISY---CRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDAL 93
Query: 333 RVFDHMADRSMDSWHLMINGY---ADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSAC 388
+FD + D+ + SW+ +I+G+ AD G+ L L +MR ++GL+PNE T + V SAC
Sbjct: 94 ELFDELPDKDLVSWNSLISGFSRRADLGI---CLGLLFRMRFEMGLKPNEVTVIPVVSAC 150
Query: 389 GSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ IH ++KS G+ + L+ + GKCG L A E
Sbjct: 151 AGVGELDVGKCIHGIAVKS--GMLLEVKVVNSLINLYGKCGCLEAACCLFE 199
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 198/365 (54%), Gaps = 31/365 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDS 345
C + + VH Y ++ + ++ + N VI+MY KCGSM A VF++M D+S+ +
Sbjct: 215 CSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLIT 274
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
W+ MI +A +G G + L LFE++ + G+ P+ ++LAV AC A +E+ F SM
Sbjct: 275 WNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSM- 333
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
++ G+ P +HY +V +LG+ G L EA + LPF P W+ L R +GD+++
Sbjct: 334 TQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSS-LPF-PNMVLWQTLLGACRTYGDVEM 391
Query: 466 EDHAEELMVDL---------------------DPSKADPKKIPTPPPKKRTAISILDGKS 504
+ A +V++ D + KK S ++ K
Sbjct: 392 AELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKG 451
Query: 505 RLVEFRN-----PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSER 558
++ +F N + KL +N ++K Y DT VLHDI E KE AL YHSE+
Sbjct: 452 KMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEK 511
Query: 559 LAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
LA+A+GL T TP+++IKNLR+CGDCH IK++S+I RE+IVRD RFH FK+G CS
Sbjct: 512 LAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCS 571
Query: 619 CGDYW 623
C DYW
Sbjct: 572 CKDYW 576
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 140/352 (39%), Gaps = 53/352 (15%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+C + L + C A ++H L+ D++L +++ Y K G + A+++FD
Sbjct: 105 TCSFAL-KACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDE 163
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEE 396
M + SW+ +I G+A + + F++M+ G L+PN T AC A++E
Sbjct: 164 MPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKE 223
Query: 397 A-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+I E + S + ++ + KCG + +A E + + + W
Sbjct: 224 GESVHKYIVEEKLNSNVQVCN------VVIDMYAKCGSMDKAYWVFEN-MRCDKSLITWN 276
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRN 511
+ +HGD A +L L S P + A+ + LVE
Sbjct: 277 TMIMAFAMHGD---GHKALDLFEKLGRSGMSPDAVSY------LAVLCACNHAGLVE--- 324
Query: 512 PTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPAR 571
+ LK N M + P+ ++ +D LL + RL AY ++S+
Sbjct: 325 -------DGLKLFNSMTQRGLEPNIKHYGSMVD-------LLGRAGRLKEAYDIVSSLPF 370
Query: 572 TPLRIIKNLRVCGDCHNAIKI-MSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
+ + + L G C + M+ + R+L+ + G SCGD+
Sbjct: 371 PNMVLWQTLL--GACRTYGDVEMAELASRKLV----------EMGFISCGDF 410
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 221/424 (52%), Gaps = 39/424 (9%)
Query: 231 NVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFEL 286
V + M C D V+ S+ +A Q G A+EL + G A+ ++
Sbjct: 227 GVFDEMVTC---DLVVWNSI--IAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRA 281
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C E ++VH + L+ DL+L+N +++MY KCG + DA +F M DR + SW
Sbjct: 282 CTGMVMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISW 339
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI+G A NG E L++F+ M+ G PN T + V AC A +E+ + +F SM
Sbjct: 340 STMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDK 399
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
FGI P EH +V +LG+ G L EA +FI + + FEP + W L R+H + L
Sbjct: 400 LFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGE-MKFEPDSVIWRTLLGACRMHKNATLA 458
Query: 467 DHAEELMVDLDPSK-----------ADPKKIPTPPPKKRT----AISILDGKS-----RL 506
+A ++ L+P AD ++ +T + G+S +L
Sbjct: 459 SYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKL 518
Query: 507 V------EFRNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
V E +P R ++L + + + K+ YVP T +VL D+ E KE L YHSE+L
Sbjct: 519 VHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKL 578
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
AIA+G +++ P+RI+KNLR+CGDCH K++S+ G+ +I+RD RFHHF+ G CSC
Sbjct: 579 AIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSC 638
Query: 620 GDYW 623
GDYW
Sbjct: 639 GDYW 642
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 260 GKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ KEA +E+ GV A++ F ++ CG P +H ++ + D+ +
Sbjct: 153 GRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVR 209
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ +I+ Y K G + R VFD M + W+ +I G+A +G G ++LF +M++ G
Sbjct: 210 SSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFL 269
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
N+ T +V AC +E +H +K + + + L+ + KCG L +A
Sbjct: 270 ANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDLIL----HNALLDMYCKCGCLLDAD 325
Query: 435 QFIEQ 439
+
Sbjct: 326 ALFSR 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 248 PSVADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYF 303
P V+ +RLC +G A+ L+ GV+AD L +LC + + +H +
Sbjct: 33 PLVSIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHV 92
Query: 304 ------LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN- 356
G L ++N ++ MY K G + DA +F M R++ SW ++ A+
Sbjct: 93 SLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAP 152
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
G E L+ +MR+ G+ N TF +V ACG+
Sbjct: 153 GRKKEALRFLVEMRRDGVAANSYTFSSVLGACGT 186
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 217/395 (54%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G KEA+E+ + + ++ ++ C N + + +H Y ++ D VL
Sbjct: 272 GYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLG 331
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + A VF+ M + + +W+ MI G +G ++ ++LF +M+K +
Sbjct: 332 TALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFR 391
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
PN T L V SAC + ++E F SM+ +GI PG EHY +V +LG+ G L EA++
Sbjct: 392 PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEE 451
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
+ +P EP+A W AL R HGD++L + +++++L+P
Sbjct: 452 -VMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAG 510
Query: 481 -----ADPKKIPTP-PPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLK-ALNQMK 528
A+ +K+ K T IS++D + EF+ +P + LK + ++K
Sbjct: 511 RWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLK 570
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ P+T VL DI++E KE L YHSE+LAIA+GLI+T T + ++KNLR+C DCH+
Sbjct: 571 MEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHS 630
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K++S++ RE+IVRD R+HHFK G CSC D+W
Sbjct: 631 AFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFE---LCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
G+V+ A ++ + +D CF + + CG E AK++ + ++ G N
Sbjct: 179 GEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEV---EAAKELF-WSMEDKNVGSW---N 231
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ KCG + +AR +F+ M +++ SW MI+GY G E L++F M++ ++P
Sbjct: 232 VMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRP 291
Query: 377 NEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ +V +AC + A+++ +IH + + F GT LV + KCG L A
Sbjct: 292 RKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGT----ALVDMYAKCGRLDMA 347
Query: 434 QQFIEQKLPFEPTAEF-WEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
E+ E F W A+ +HG + A EL + K P I
Sbjct: 348 WDVFEK---MEKKEVFTWNAMICGLGMHGR---AEDAIELFFKMQKQKFRPNGI------ 395
Query: 493 KRTAISILD--GKSRLVEFRNPTLYRDDEKLKALNQMKE 529
T + +L S +V DE L+ N M+E
Sbjct: 396 --TLLGVLSACAHSGMV----------DEGLRIFNSMEE 422
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 208/383 (54%), Gaps = 28/383 (7%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
LM+ + + F + C + + K++H Y ++ + ++ MY KCG
Sbjct: 343 LMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGD 402
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ +A+ VF+ + + SW ++ GYA +G D+ L FE + K G +P+ F+ V SA
Sbjct: 403 IENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSA 462
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A +++ +F S+K + G++ +HY ++ +L + G EA+ I + +P +P
Sbjct: 463 CAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINE-MPIKPDK 521
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPS-----------------KADPKKI---- 486
W AL RIHG+++L A + + +++P +A+ I
Sbjct: 522 YIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETM 581
Query: 487 PTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQ-MKESTYVPDTRYVL 540
+ K+ +S ++ + + F +P E L L++ MKE YVPDT +VL
Sbjct: 582 DSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVL 641
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
HD++ E KE+ L YHSE+LA+A+G+ISTP+ TP+++ KNLR C DCHNAIK +S I GR+
Sbjct: 642 HDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRK 701
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+IVRD+ RFH F+ G CSC DYW
Sbjct: 702 IIVRDSNRFHCFEGGSCSCKDYW 724
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC + +++EA++L+ + K AS + TL + C + + K+VH + S G L ++
Sbjct: 98 LCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYIS 156
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N++++MY KCGS+ DA +VFD M R + SW++MI+GY G ++ LF++M
Sbjct: 157 NRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM------ 210
Query: 376 PNEQTF--LAVFSACGSADAIEEAF 398
PN F A+ S C + EEA
Sbjct: 211 PNRDNFSWTAIISGCVQHNRPEEAL 235
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
KK+H + ++ + D V+ +++MYGKCGS+ +AR +FD M +R + SW MI+ Y
Sbjct: 270 GKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLK 329
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
NG +EG LF + + PN+ TF V +AC A E+ + G +
Sbjct: 330 NGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAA-EDLGKQIHAYMVRVGFDSFSS 388
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR-NYARIHGDIDLEDHAEELMV 474
LV + KCG + A+ E LP +P W +L YA+ HG D H EL++
Sbjct: 389 AASALVHMYSKCGDIENAKSVFEI-LP-QPDLFSWTSLLVGYAQ-HGQHDKALHFFELLL 445
>gi|125572887|gb|EAZ14402.1| hypothetical protein OsJ_04322 [Oryza sativa Japonica Group]
Length = 490
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 180/330 (54%), Gaps = 31/330 (9%)
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
G GS+ DAR VFD M R +W +I GYA NG G E L ++ M + G +P+ TF+
Sbjct: 163 GPTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFV 222
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ AC A ++ HF+SM+SE GISPG +HY +V +LG+ G L EA +++
Sbjct: 223 GLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPA 282
Query: 443 FEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT-------------- 488
E A W+AL R H + L + A ++ LDP+ A P + +
Sbjct: 283 AELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVAR 342
Query: 489 -PPPKKRTAISILDGKSRLVEF--------------RNPTLYRDDEKLKALNQMKESTYV 533
+ IS G S +V R +YR E++ A +++ +V
Sbjct: 343 VRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAA--RIRARGHV 400
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
PDT + L D E +E L +H ERLA+A+GL++ PA P+R+ KNLRVCGDCH AIK++
Sbjct: 401 PDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMV 460
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ + GRE+I+RD+ FHH KDG CSCGDYW
Sbjct: 461 AEVYGREIILRDSNCFHHMKDGSCSCGDYW 490
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 28/379 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G + D F ++ C +++H +++ L + + +I MY + G + D+
Sbjct: 290 GFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDS 349
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+ F + + W MI Y +G G+E L+LF QM L ++ NE TFL++ AC +
Sbjct: 350 IKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHS 409
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
E+ +F+ M ++ + P EHY +V +LG+ G L EA+ I + +P +P W+
Sbjct: 410 GLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMI-RSMPVQPDGIIWK 468
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPP 490
L ++H + ++ + E ++ LDP A K +
Sbjct: 469 TLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRS 528
Query: 491 PKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDID 544
+K IS L+ K+ + +F +P + D LK L +++K+ YVP+ VLHD+D
Sbjct: 529 VRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMD 588
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
E KE L +HSE+ AIA+ L++T P+R++KNLRVC DCHNAIK +SRI RE+IVR
Sbjct: 589 NEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVR 648
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D RFHHFKDG+CSCG+YW
Sbjct: 649 DASRFHHFKDGECSCGNYW 667
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A L Q K+A+ L + G D ++ C + ++VH L+
Sbjct: 164 AMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKC 223
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
V+ + + MY K GS++D ++ M R++ +W+ +I G A NG +E L +
Sbjct: 224 GFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQY 283
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
M+ G +P++ TF++V SAC + + IH E +K+ G S L+ +
Sbjct: 284 NMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKA--GASSVLAVVSSLISMYS 341
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ G L ++ + + F+ W ++ HG
Sbjct: 342 RSGCLEDSIKAFVDRENFDVV--LWSSMIAAYGFHG 375
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 247 PPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
S+ + LC +G++K+A + + +D S F L + C K+VH + S
Sbjct: 32 SASLQEFTSLCNDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITS 91
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG-------LG 359
D ++N ++ Y K G + +F +M R++ S++++INGY G L
Sbjct: 92 GGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLF 151
Query: 360 DE------------------------GLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAI 394
DE L LF++M LG P+E T +V C G +
Sbjct: 152 DEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLL 211
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+H +K F +S L + + K G L + ++ I + +P T W L
Sbjct: 212 AGQEVHACLLKCGFELSSVVGSSLAHMYI--KSGSLSDGEKLI-KSMPIR-TVVAWNTL 266
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 205/386 (53%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ GV D ++ C + E K + Y + I + L N +I+M+ KCG
Sbjct: 323 EMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCG 382
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +VF M R++ SW MI G A +G G E + +F++M + G+ P++ F+ V S
Sbjct: 383 DVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLS 442
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + +++ +F +M++ F I P EHY +V +L + G + EA +F+ + +P EP
Sbjct: 443 ACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFV-RAMPVEPN 501
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP-------PKKRTAISI 499
W ++ G++ L + + ++ +PS + + KK +
Sbjct: 502 QVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREM 561
Query: 500 LDGK-------SRLVEFRNPT---------------LYRDDEKLKALNQMKESTYVPDTR 537
+D K S ++E N +Y E++ ++K + YVP T
Sbjct: 562 MDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMG--REIKRAGYVPTTS 619
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VL DID+E KE AL HSE+LAIA+ L+STP TP+RI+KNLRVC DCH+A K +S++
Sbjct: 620 QVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVY 679
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD RFHHFK+G CSCGD+W
Sbjct: 680 NREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC---GSM--TDARRV 334
F + + C E VH ++ D + N ++ MY C GS A++V
Sbjct: 230 FPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKV 289
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
FD + +W MI GYA G + LF +M+ G+ P+E T ++V SAC A+
Sbjct: 290 FDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGAL 349
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA-QQFIEQKLPFEPTAEFWEAL 453
E ES I E L+ + KCG + A + F E K+ T W ++
Sbjct: 350 ELG-KWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKV---RTIVSWTSM 405
Query: 454 RNYARIHG 461
+HG
Sbjct: 406 IVGLAMHG 413
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 210/385 (54%), Gaps = 32/385 (8%)
Query: 269 MDKGVKAD-ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+D+ VK D +C L + C N + K+VHD+ ++ + G L L+N ++ MY +CGS
Sbjct: 209 VDRCVKPDNVTCLLAL-QACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M A VF+ M +R++ SW MI+G A NG G E ++ F +M K G+ P EQT + SA
Sbjct: 268 MDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 388 CGSADAIEEAFIHFESMKS-EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
C + ++E + F+ M+S EF I P HY +V +LG+ L +A I + + +P
Sbjct: 328 CSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLI-KSMEMKPD 386
Query: 447 AEFWEALRNYARIHGDIDL---------EDHAEE-----LMVDLDPSKADPKKIP---TP 489
+ W L R+HG+++L E AEE L+++ S +K+ +
Sbjct: 387 STIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSL 446
Query: 490 PPKKRT----AISILDGKSRLVEFRNPTLY--RDDEKLKAL----NQMKESTYVPDTRYV 539
KKR S ++ + + EF + R +E K L Q+K + YV +
Sbjct: 447 MKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSE 506
Query: 540 LHDID-QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
LH++D +E K AL YHSE+LAIA+G++ TP T +R+ KNLR C DCHN K +S +
Sbjct: 507 LHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTIRVTKNLRTCVDCHNFAKFVSDVYD 566
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R +IVRD RFHHFK G CSC D+W
Sbjct: 567 RVVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 210/409 (51%), Gaps = 43/409 (10%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G EA++ K G K + + C N + K +H Y + I
Sbjct: 219 IAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEI 278
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVF-DHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + L +I+MY KCG + A RVF +H + + W+ MI G+A +G+ +E + +FE
Sbjct: 279 KMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFE 338
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM+ + PN+ TF+A+ +AC +EE ++F M S++ I+P EHY +V +L +
Sbjct: 339 QMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRS 398
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------ 481
G L EA+ I +P P W AL N RI+ D++ ++ +DP+
Sbjct: 399 GLLKEAEDMISS-MPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLL 457
Query: 482 ------------------------DPKKIP--TPPPKKRTAISILDGKSRLVEFRNPTLY 515
D KKIP + K T L G + R +
Sbjct: 458 SNIYSTSGRWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSF 517
Query: 516 RDDEKLKALNQMKESTYVPDTRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPL 574
D+ K +K + YVP+ +LHDID +E KE AL HSE+LAIA+GL++T TP+
Sbjct: 518 LDEMTTK----LKSAGYVPELGELLHDIDDEEDKETALSVHSEKLAIAFGLMNTANGTPI 573
Query: 575 RIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RI+KNLRVCGDCH A K +S++ R +IVRD R+HHF+DG CSC DYW
Sbjct: 574 RIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 42/251 (16%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK----- 324
D G+ + F F CGN + ++V + ++ + ++ + N +I MYGK
Sbjct: 108 DLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVG 167
Query: 325 --------------------------CGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
G+M+ A+ +FD M +R + SW +I GY G
Sbjct: 168 ESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGC 227
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHY 417
E L F +M ++G +PNE T ++ +AC + A+++ +IH K E ++ E
Sbjct: 228 FMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMN---ERL 284
Query: 418 LG-LVGVLGKCGHLFEAQQ-FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
L ++ + KCG + A + F E K+ + W A+ +HG + + A +
Sbjct: 285 LASIIDMYAKCGEIESASRVFFEHKV--KQKVWLWNAMIGGFAMHG---MPNEAINVFEQ 339
Query: 476 LDPSKADPKKI 486
+ K P K+
Sbjct: 340 MKVEKISPNKV 350
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L L + K + K+ H + + + V NK++++ C S++ A ++FD +
Sbjct: 19 LVSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIPQPD 77
Query: 343 MDSWHLMINGYADN-GLGDEGLQLFEQMRK-LGLQPNEQTFLAVFSACGSADAIEEAF-I 399
+ ++ MI ++ + L +F + + LGL PN +F+ FSACG+ ++E +
Sbjct: 78 LFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQV 137
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++K G+ L+G+ GK G + E+Q+ +
Sbjct: 138 RIHAVK--VGLENNVFVVNALIGMYGKWGLVGESQKVFQ 174
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 197/380 (51%), Gaps = 39/380 (10%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D +C L + C N E ++VH+Y + G L L N +I MY +CG + A +F
Sbjct: 271 DVTCLL-LLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIF 329
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
M +R++ SW MI+G+A +G G E ++ FEQM++LG+ P++QT V SAC ++
Sbjct: 330 KRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVD 389
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
+ + F+ M FGI P HY +V +LG+ G L +A Q I + +P + W L
Sbjct: 390 DGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLI-MSMVIKPDSTLWRTLLG 448
Query: 456 YARIHGDIDLEDHAEELMVDLDPSKA--------------------------DPKKIPTP 489
RIH L + +++L +A K I T
Sbjct: 449 ACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTS 508
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKALN----QMKESTYVPDTRYVLHDI 543
P S ++ K ++ EF + R DE + L+ Q+K + YV + LH++
Sbjct: 509 P-----GCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNL 563
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
E K L YHSE+LAIA+G+++TP T +R+ KNLR+C DCHN K++S RE+++
Sbjct: 564 GAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVI 623
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHF++G+CSC YW
Sbjct: 624 RDRTRFHHFREGQCSCNGYW 643
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H L+ + D +L ++++Y C +A +VFD + SW+++I+ N
Sbjct: 189 QIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNR 248
Query: 358 LGDEGLQLFEQMRKL--GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+ L++F+ M+ G +P++ T L + AC + A+E + E G
Sbjct: 249 RTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGE-RVHNYIEEHGYDGALN 307
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + +CG L +A ++ E W A+ + +HG
Sbjct: 308 LCNSLITMYSRCGRLEKAYSIFKRM--DERNVVSWSAMISGFAMHG 351
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 219/400 (54%), Gaps = 39/400 (9%)
Query: 258 QEGKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ L + + + + F ++ +C N E +++H ++S+
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + ++ +Y KCG A +VF+ + +++ W+ M+ YA + + ++LF++M+ G
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN TFL V +AC A ++E +F+ MK E I P +HY LV +LG+ G L EA
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEA 372
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ I +P +PT W AL +H + +L A + + +L P +
Sbjct: 373 LEVI-TNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAA 431
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
K + KK T +S ++ ++++ F ++ +Y EKL L
Sbjct: 432 DGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY---EKLAEL 488
Query: 525 NQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+ M+++ Y+ DT YVL ++D + K Q + YHSERLAIA+GLI+ PA P+R++KNLRVC
Sbjct: 489 GEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVC 548
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCHNAIK MS R +IVRDN RFH F+DGKCSC DYW
Sbjct: 549 GDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ VH +++ D+ + + +++MY KCG + AR++FD M R++ +W M+ GYA
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
G +E L LF++ L N+ +F +V S C ++ +E
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 206/403 (51%), Gaps = 43/403 (10%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ + + V+ D + + C E K VH Y I+ +L
Sbjct: 186 QAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLF 245
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++MY KCG + A VF+ M +++ +W MI G A +G G E + LF QM G
Sbjct: 246 FGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSG 305
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P++ F+ V AC A +++ F+SM ++GI P EHY +V +L + G L+EA
Sbjct: 306 IRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEA 365
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
++ I QK+P EP A W AL R H +++ ++ + + L+P K+
Sbjct: 366 KEMI-QKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAA 424
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTL-------YRDDEK 520
K + P ++ + + + + +P + Y D +
Sbjct: 425 SGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTR 484
Query: 521 LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
++ E Y+PD + VL DI++E KE AL HSE+LAIA+ LIS P+RI KNL
Sbjct: 485 IRL-----EEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNL 539
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH+ K++S++ GRE++VRD RFH FK+G CSC DYW
Sbjct: 540 RVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 298 KVHDYFLQSTIRGDLVLN----------NKVIEMYGKCGSMTDARRVFDHMADRSMDSWH 347
+VH FL S G L+L N +I Y + G + DAR +FD M R+ SW
Sbjct: 119 RVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWS 178
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE 407
M+NGY G G E L++F +M+ ++P++ + V +AC A+E+ +K+
Sbjct: 179 AMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAH 238
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
GI LV + KCG + A E+
Sbjct: 239 -GIKINLFFGTALVDMYSKCGEVQLAMDVFER 269
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 198/365 (54%), Gaps = 31/365 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDS 345
C + + VH Y ++ + ++ + N VI+MY KCGSM A VF++M D+S+ +
Sbjct: 215 CSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLIT 274
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
W+ MI +A +G G + L LFE++ + G+ P+ ++LAV AC A +E+ F SM
Sbjct: 275 WNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSM- 333
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
++ G+ P +HY +V +LG+ G L EA + LPF P W+ L R +GD+++
Sbjct: 334 TQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSS-LPF-PNMVLWQTLLGACRTYGDVEM 391
Query: 466 EDHAEELMVDL---------------------DPSKADPKKIPTPPPKKRTAISILDGKS 504
+ A +V++ D + KK S ++ K
Sbjct: 392 AELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKG 451
Query: 505 RLVEFRN-----PTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSER 558
++ +F N + KL +N ++K Y DT VLHDI E KE AL YHSE+
Sbjct: 452 KMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEK 511
Query: 559 LAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
LA+A+GL T TP+++IKNLR+CGDCH IK++S+I RE+IVRD RFH FK+G CS
Sbjct: 512 LAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCS 571
Query: 619 CGDYW 623
C DYW
Sbjct: 572 CKDYW 576
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 40/297 (13%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
+C + L + C A ++H L+ D++L +++ Y K G + A+++FD
Sbjct: 105 TCSFAL-KACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDE 163
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEE 396
M + SW+ +I G+A + + F++M+ G L+PN T AC A++E
Sbjct: 164 MPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKE 223
Query: 397 A-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+I E + S + ++ + KCG + +A E + + + W
Sbjct: 224 GESVHKYIVEEKLDSNVQVCN------VVIDMYAKCGSMDKAYWVFEN-MRCDKSLITWN 276
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRN 511
+ +HGD A +L L S P + A+ + LVE
Sbjct: 277 TMIMAFAMHGD---GHKALDLFEKLGRSGMSPDAVSY------LAVLCACNHAGLVE--- 324
Query: 512 PTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+ LK N M + P+ ++ +D LL + RL AY ++S+
Sbjct: 325 -------DGLKLFNSMTQRGLEPNIKHYGSMVD-------LLGRAGRLKEAYDIVSS 367
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 204/380 (53%), Gaps = 30/380 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+K D ++ C + AK +H Y ++ + G L +NN +I+MY KCG++ A
Sbjct: 75 GIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAA 134
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VF+ M R++ SW MIN +A +G L+ F QM+ ++PN TF+ V AC A
Sbjct: 135 RGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHA 194
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+EE F SM +E I+P EHY +V + G+ L +A + +E +P P W
Sbjct: 195 GLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVET-MPLAPNVVIWG 253
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDP----SKADPKKIPTPPPK-----------KRTA 496
+L +IHG+ +L + A + +++L+P + I + K+
Sbjct: 254 SLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRG 313
Query: 497 ISILDGKSRLVEFRNPT--LYRDDEKLK-----------ALNQMKESTYVPDTRYVLHDI 543
IS G SR +E N D+K K + ++K Y P+TR VL D+
Sbjct: 314 ISKERGCSR-IELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDV 372
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E K++ +L+HSE+LA+ YGL+ + +RI+KNLRVC DCH IK++S++ G E+IV
Sbjct: 373 EEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIV 432
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHH+K G CSC DYW
Sbjct: 433 RDRTRFHHYKAGVCSCNDYW 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+LV+ +I Y + G + DAR +FD M ++ + W MI+GYA++ E L LF +M+
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G++P++ T L+V SAC ++ A +IH K+ G + + L+ + KCG+
Sbjct: 73 VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN--ALIDMYAKCGN 130
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
L A+ E+ + W ++ N IHGD
Sbjct: 131 LGAARGVFEKMQSRNVIS--WTSMINAFAIHGD 161
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 217/400 (54%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI--RGD 311
Q + +EA+E+ ++ GVK D + C + A V D QS +
Sbjct: 249 QNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSN 308
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ + +I+MY KCGS+ DA +VF+ M +R++ S+ MI G+A +GL ++LF++M K
Sbjct: 309 VVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLK 368
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++PN TF+ V +AC A +E+ F M+ G++P +HY +V +LG+ G L
Sbjct: 369 TEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLE 428
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------- 481
EA ++ +P P W AL RIHG+ D+ A + +L+P+
Sbjct: 429 EALNLVKM-MPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIY 487
Query: 482 -------DPKKIP----TPPPKKRTAISILDGKSRLV------EFRNPTLYRDDEKLK-A 523
D K+ KK S ++GK ++ + +P + L+
Sbjct: 488 ASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDL 547
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L+++K Y P+ V +DI E K++ L+ HSE+LA+A+GL++T A +RI+KNLR+C
Sbjct: 548 LDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRIC 607
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ + S+I GRE++VRDN RFHHF+DG+CSCG++W
Sbjct: 608 EDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHD-YFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+G+ + F L + C ++VH L DL + N +I+MY KCG +
Sbjct: 133 QGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLG 192
Query: 330 DARRVFDHMADRS-------------------------------MDSWHLMINGYADNGL 358
RVFD M DR M +W M+ GYA N
Sbjct: 193 CGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNAR 252
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHY 417
E L++FE+M+ G++ +E T + V SAC A + A ++ + +S FG +
Sbjct: 253 PREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVG 312
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
L+ + KCG + +A + E ++ + + +A +HG L A EL ++
Sbjct: 313 SALIDMYAKCGSVEDAYKVFE-RMEERNVYSYSSMIVGFA-MHG---LAGAAMELFDEML 367
Query: 478 PSKADPKKI 486
++ P ++
Sbjct: 368 KTEIKPNRV 376
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
W +I GYA G E + L+ MR+ G+ P TF A+ AC +A + +H +++
Sbjct: 107 WTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTI 166
Query: 405 KSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYARI 459
G++ Y+G L+ + KCG L + ++ L + + W +L YA++
Sbjct: 167 LIG---GFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVIS--WTSLIVAYAKV 219
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 217/417 (52%), Gaps = 33/417 (7%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWY 293
QC V+ +V + Q K +EA + +G+ D + F T+ +
Sbjct: 171 QCVGDRDVVTWNVLVMG-FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAAL 229
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+HD ++ ++ + +I MY KCGS+ DA +VF+ + D ++ SW MI+ Y
Sbjct: 230 HQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY 289
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+G ++ ++LFE M G++P+ TF+ V SAC +EE HF SMK ++PG
Sbjct: 290 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 349
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY +V +LG+ G L EA++FIE +P +PT W AL R +G++ + A E +
Sbjct: 350 PEHYACMVDLLGRAGWLDEAKRFIES-MPMKPTPSVWGALLGACRKYGNLKMGREAAERL 408
Query: 474 VDLDP---------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF--R 510
+++P + + + +K S +D K+ F
Sbjct: 409 FEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAH 468
Query: 511 NPTLYRDDEKLKALNQMKEST----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+ + DE K L ++++ YV +T +V + +++ +EQ L YHSE+LA+A+GL+
Sbjct: 469 DRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLL 528
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ P +P+RI KNLR CG CH +K+ S+I RE+IVRD RFH F DG CSCGDYW
Sbjct: 529 TLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ +++H + ++ + +++MY KC M A RVFD M +R++ SW+ MI G+
Sbjct: 28 HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 87
Query: 355 DNGLGDEGLQLFEQ-MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
N L D + +F+ +R+ + PNE + +V SAC + + + +FG+ P
Sbjct: 88 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG-RQVHGVVVKFGLVPL 146
Query: 414 TEHYLGLVGVLGKC 427
T L+ + KC
Sbjct: 147 TYVMNSLMDMYFKC 160
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L +K V + ++ C N ++VH ++ + + N +++MY KC
Sbjct: 103 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRF 162
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ ++F + DR + +W++++ G+ N +E F MR+ G+ P+E +F V +
Sbjct: 163 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 222
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
S A+ + IH + +K G L+ + KCG L +A Q E
Sbjct: 223 SASLAALHQGTAIHDQIIK--LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 280
Query: 447 AEFWEALRNYARIHG 461
+ W A+ + ++HG
Sbjct: 281 S--WTAMISAYQLHG 293
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 216/394 (54%), Gaps = 34/394 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDY--FLQSTIRGDLVLNN 316
++AI ++ + G+ +++ F ++ + C + +++H+ L + D+ +
Sbjct: 245 RDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLT 304
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG++ A +FD +A + W+ +I A +G ++ L+LFE+MR GLQP
Sbjct: 305 ALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 364
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
TF +V AC A +++ HF S + GI P EH+ +V +LG+ G + +++
Sbjct: 365 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDL 424
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT-------- 488
+ +PFEP W A R + ++D A E + LDP K P + +
Sbjct: 425 LLH-MPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGR 483
Query: 489 --PPPKKRTAI-----------SILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKE 529
+ R A+ S ++ K R+ EF + P + +L+ L + MKE
Sbjct: 484 WSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKE 543
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVPDT VLHD+ QE KE + YHSE+LA+A+ L++TP +P+R++KNLRVC DCH A
Sbjct: 544 AGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTA 603
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S++V RE++VRD RFH F++G CSCGDYW
Sbjct: 604 SKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + + + L + I + ++ ++ MYGK G TDA VF M+ R + +W
Sbjct: 71 CTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAW 130
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
M+ YA NG E L LF QM G+ PN+ T ++ AC S + + + +++
Sbjct: 131 SAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEA 190
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR-NYAR 458
+ GI G LV + GKCG + A + Q + E W A+ YAR
Sbjct: 191 Q-GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIV--EKNVVAWSAISAAYAR 240
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 251 ADLARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + G +EA+ L MD GV + + + C + + +H
Sbjct: 132 AMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQ 191
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I+ +V+ ++ +YGKCG + A F + ++++ +W + YA N + +++
Sbjct: 192 GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVL 251
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M GL PN TF++V AC + A+++ IH + G+ LV +
Sbjct: 252 HRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYS 311
Query: 426 KCGHLFEAQQFIEQ 439
KCG+L A ++
Sbjct: 312 KCGNLALAGDMFDK 325
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 76/204 (37%), Gaps = 28/204 (13%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ Y + G++ R+ FD M + SW+ +I Y N D F M G+ P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 378 EQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
E SAC A I I + + GI + LV + GK GH +A
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGT--GIEEESIVQTALVSMYGKLGHCTDAASV 118
Query: 437 IEQKLPFEPTAEFWEAL-RNYARIHGDIDLEDHAEELM-----VDLDPSKADPKKIPTPP 490
+ + A W A+ YAR H E + +DLD
Sbjct: 119 FLRMSHRDVVA--WSAMVAAYAR-------NGHPREALGLFRQMDLDG----------VA 159
Query: 491 PKKRTAISILDGKSRLVEFRNPTL 514
P K T +S LD + L + R+ L
Sbjct: 160 PNKVTLVSGLDACASLGDLRSGAL 183
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 213/406 (52%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L+ Q GK +EA + K V+ D + +L C + ++ + H +
Sbjct: 377 ALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIR 436
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + N +I+MY KCG + +R+VFD M R + SW+ MI GY +GLG E LF
Sbjct: 437 GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLF 496
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M+ G +P++ TF+ + +AC + + E F++M ++GI P EHY+ +V +L +
Sbjct: 497 LSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 556
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA QFI Q +P + W AL RIH +IDL ++ L P
Sbjct: 557 GGFLDEAYQFI-QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVL 615
Query: 479 ------------SKADPKKI-PTPPPKKRTAISILDGKSRLVEFR--------NPTLYRD 517
A+ + I KK S ++ L F +P +Y +
Sbjct: 616 LSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHE 675
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ + L +K+ Y DT +VL D+++E KE+ALLYHSE+LAIA+G++S + +
Sbjct: 676 LDNI--LIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVT 733
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH AIK M+ + R +IVRD RFHHFK+G+CSCGD+W
Sbjct: 734 KNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTL------FELCGNPKWYENAKKVHDYFLQSTIR 309
LC ++ EA L K + + CF + +C + ++H +S I
Sbjct: 282 LCD--RMTEAFNLF-KDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIH 338
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DL N ++ MY K G + +A +FD +A + S+ +++GY NG +E +F++M
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ +QP+ T +++ AC A++ S+ G++ T L+ + KCG
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIR-GLALETSICNSLIDMYAKCGR 457
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ ++Q + K+P + + Y IHG L A L + + +P +
Sbjct: 458 IDLSRQVFD-KMPARDIVSWNTMIAGYG-IHG---LGKEATTLFLSMKNQGFEPDDV 509
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H + + DL ++ +I++Y +C A VF M R + +W+ M+ GYA++
Sbjct: 119 RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANH 178
Query: 357 GLGDEGL-QLFEQMRKLGLQPNEQTFLAVF 385
G+ + L + + GL+PN T +++
Sbjct: 179 GMYHHAIAHLLDMQDRGGLRPNASTLVSLL 208
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 7/202 (3%)
Query: 262 VKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD---LVLNNK 317
+ +++ D+G ++ +AS +L L VH Y L++ + + +++
Sbjct: 185 IAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTA 244
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++MY KC + A RVF M R+ +W +I G+ E LF+ M G+
Sbjct: 245 LLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFL 304
Query: 378 EQTFLA-VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
T +A C S + ++ ++ GI L+ + K G + EA
Sbjct: 305 SATSVASALRVCASLADLRMG-TQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATML 363
Query: 437 IEQKLPFEPTAEFWEALRNYAR 458
++ + + T + L Y +
Sbjct: 364 FDE-IAIKDTISYGALLSGYVQ 384
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 213/386 (55%), Gaps = 45/386 (11%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEMYG 323
L K V D + TLF C + A K+ D + T++ L+LN N I MY
Sbjct: 495 LSQKDVTPDWVTYVTLFRGCADI----GANKLGDQIIGHTVKAGLILNVSVANAAITMYS 550
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG +++A+++FD + + + SW+ MI GY+ +G+G + + F+ M G +P+ +++A
Sbjct: 551 KCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 610
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
V S C + ++E ++F+ M GISPG EH+ +V +LG+ GHL EA+ I+ K+P
Sbjct: 611 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID-KMPM 669
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP---- 483
+PTAE W AL + +IHG+ +L + A + + +L D K+D
Sbjct: 670 KPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQV 729
Query: 484 -KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD----EKLKALNQMKEST-YVPDTR 537
K + KK S ++ ++++ F+ DD + + N+M E +
Sbjct: 730 RKLMRDKGIKKNPGYSWMEVENKVHVFKA-----DDVSHPQVIAIRNKMDELMEKIAHLG 784
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YV + ++ ++HSE+LA+A+G++S PA P+ I+KNLR+CGDCH IK++S +
Sbjct: 785 YV-----RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVT 839
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE ++RD RFHHFK G CSCGDYW
Sbjct: 840 DREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 253 LARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L Q G+V+EA +E+ KGV+ D++ + + C K++H ++S
Sbjct: 242 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 301
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D + + +IE+Y KCGS +A+RVF+ + DR+ SW ++I G + ++LF Q
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ 361
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
MR + ++ + S C
Sbjct: 362 MRAELMAIDQFALATLISGC 381
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N ++ Y K GS++DA +FD M R + SW+ +++GY +GL+ F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEA------FIHFESMKSEFGISPGTEHYLGLVGV 423
+ G PN TF V +CG+ E A F F +F P E LV +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKF-----DFWGDPDVET--ALVDM 182
Query: 424 LGKCGHL-FEAQQF--IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
+CG++ F ++ F IE+ F + L YA+++G DHA E D+
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNS----MLAGYAKLYG----IDHAIEYFEDM 230
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
TL C N +++H L+S +V++N +I +Y KCG + +A VF M++R
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 435
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW MI Y+ G + + F+ M N T+ A+ A A E+ +
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGMA----TRNAITWNAMLGAYIQHGAEEDGLKMY 491
Query: 402 ESMKSEFGISPGTEHYLGL 420
+M S+ ++P Y+ L
Sbjct: 492 SAMLSQKDVTPDWVTYVTL 510
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 34/192 (17%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
+A F + + CG E A ++ F + GD + +++M+ +CG + A R+F
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196
Query: 336 ------------------------DH-------MADRSMDSWHLMINGYADNGLGDEGLQ 364
DH MA+R + SW++MI + +G E L
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGV 423
L +M + G++ + T+ + +AC ++ +H + ++S I P L+ +
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS--ALIEL 314
Query: 424 LGKCGHLFEAQQ 435
KCG EA++
Sbjct: 315 YAKCGSFKEAKR 326
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 203/385 (52%), Gaps = 32/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L +GV+ + + + C ++VH +S + ++ MY KCG
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M A RVF+ MA + SW +I+GYA NG +E L+ F+ + G++P+ TF+ V SA
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A +++ F S+K ++ I +HY ++ +L + G A++ I + +P
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMI-GNMAVKPNK 438
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------------ADPKKI- 486
W +L RIH ++ L A E + +++P D ++I
Sbjct: 439 FLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIM 498
Query: 487 PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
+ K A S ++ R+ F + +Y +KL +M E YV D +
Sbjct: 499 ESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYV--KMVEEGYVADIEF 556
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD++ E KEQ + YHSERLA+A+G+I+TP +P+++ KNLR+CGDCH AIK++S+IV
Sbjct: 557 VLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQ 616
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
R++IVRD+ RFHHFKDG CSC DYW
Sbjct: 617 RDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
GD VL + + +MY KCG + DARRVFD M R SW M+ Y D G G EG +LF M
Sbjct: 200 GDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHM 259
Query: 370 -RKLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGISPGTEHYLGLVGVLG 425
R G++PNE T+ V AC A E+F +H KS G S E L+ +
Sbjct: 260 LRTRGVRPNEFTYAGVLRAC--AQFAVESFGRQVHGRMAKSGTGDSCFAES--ALLRMYS 315
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
KCG + A + E +P W A+
Sbjct: 316 KCGDMGSAVRVFEAMA--KPDLVSWTAV 341
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 207/402 (51%), Gaps = 41/402 (10%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF-----LQSTI 308
Q G+ EA+ L + GV+ D + E+ K +H Y +Q ++
Sbjct: 496 QHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSV 555
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R + +I+MY KCGS+ DA VF + D+ + W+ MINGYA +G + L++F Q
Sbjct: 556 R----VGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQ 611
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
R+ GL P + TF+ + +AC + +EE F+SM+ E+GI P EHY +V +LG+ G
Sbjct: 612 SREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAG 671
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
+ EA + Q + P A W +L R+H ++ L + +V + +
Sbjct: 672 LIKEAFCLV-QSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLS 730
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKALN 525
+ +K S ++ + EF + R DE L+
Sbjct: 731 NIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLD 790
Query: 526 QM----KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+M KE +VP T VLHD+D+ KE+AL HSE+LA+A+GLIST ++I+KNLR
Sbjct: 791 KMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLR 850
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH +K++SRI GR+++ RD RFHHF DG CSCGDYW
Sbjct: 851 ACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V ++ Y G++ DAR +FD + + W+ MI+GY +G +E L+LF +M
Sbjct: 453 VVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLG 512
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHF---ESMKSEFGISPGTEHYLGLVGVLGKC 427
G++P+E T + V SA +E ++H S + + + GT L+ + KC
Sbjct: 513 SGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGT----ALIDMYCKC 568
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
G L +A + W A+ N +HGD
Sbjct: 569 GSLGDAVDVFHG--IGDKDIVVWNAMINGYAMHGD 601
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 201/397 (50%), Gaps = 64/397 (16%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +EA+ L + G+ D + C E K+VH FL+S + L ++
Sbjct: 421 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 480
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY KCG + DA +VFD M + + +W +I GYA NG G + L E R
Sbjct: 481 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRS---- 536
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+F+SM+ +GI PG EHY ++ +LG+ G L EA++
Sbjct: 537 ------------------------YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 572
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------ 483
+ Q + +P A W+AL R+HG+++L + A + +L+P A P
Sbjct: 573 LLNQ-MAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAG 631
Query: 484 ---------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ 526
+ + K S ++ S++ F R +Y +++ L
Sbjct: 632 KWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMIL-- 689
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE+ YVPD + LHD+D+E KE L YHSE+LA+A+GL++ P P+RI KNLR+CGDC
Sbjct: 690 IKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDC 749
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A+K +S + R +I+RD+ FHHF++G CSC DYW
Sbjct: 750 HTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
NA VH +++ ++NN +++MY K G A VF+ M D+ + SW ++ G
Sbjct: 359 NAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCV 418
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG 413
NG +E L+LF +MR +G+ P++ AV SAC +E +H +KS G S
Sbjct: 419 HNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLS 478
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++ LV + KCG + +A + +
Sbjct: 479 VDN--SLVSMYAKCGCIEDANKVFDS 502
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 257 CQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C+ G EA+EL +G + + + ++ +C E K++H + +++ +
Sbjct: 114 CRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNA 173
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ +++MY KC + +A +F+ D R+ W M+ GY+ NG G + ++ F MR
Sbjct: 174 FVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRG 233
Query: 372 LGLQPNEQTFLAVFSACGSADAIE-EAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
G++ N+ TF ++ +ACGS A A +H ++S FG + ++G LV + KCG
Sbjct: 234 EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANV----FVGSALVDMYSKCG 289
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
L A++ +E +P + W ++
Sbjct: 290 DLSNARRMLETMEVDDPVS--WNSM 312
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +AIE + +G++ + F ++ CG+ +VH ++S ++
Sbjct: 217 QNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVF 276
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY KCG +++ARR+ + M SW+ MI G GLG+E L LF M
Sbjct: 277 VGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRH 336
Query: 374 LQPNEQTFLAVFSA 387
++ +E T+ +V +
Sbjct: 337 MKIDEFTYPSVLNC 350
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y G + +AR++F RS +W +I+GY G E L+LF +M+ G +
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PN+ T+ +V C +E+ IH ++K++F + GLV + KC + EA+
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV--VTGLVDMYAKCKCILEAE 193
Query: 435 QFIEQKLPFEPTAEFWEAL 453
E P + W A+
Sbjct: 194 YLFELA-PDKRNHVLWTAM 211
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 201/394 (51%), Gaps = 48/394 (12%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + +E+++ VK + +L LC + K H Y + + D++L
Sbjct: 373 CMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILET 432
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I MY KCG +T AR +F+ R + W+ M+ G++ +G G E L+LF +M G++P
Sbjct: 433 ALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEP 492
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N+ TF+++F AC + +E HY LV +LG+ GHL EA
Sbjct: 493 NDITFVSIFHACSHSGLME--------------------HYGCLVDLLGRAGHLDEAHNI 532
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPKK 485
IE +P P W AL ++H ++ L + A +++LDP A K+
Sbjct: 533 IEN-MPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKR 591
Query: 486 ----------IPTPPPKKRTAISILDGKSRLVEFRNP------TLYRDDEKLKALNQMKE 529
+ KK +S ++ + F++ T + + +++E
Sbjct: 592 WNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRE 651
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
S Y P+T VL +ID+E KE AL YHSE+LA A+GLIST TP+RI+KNLR+C DCH A
Sbjct: 652 SGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAA 711
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S+I GR +IVRD RFHHF +G CSC YW
Sbjct: 712 TKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD----LVLNNKVIEMY 322
E+ GVK +L + GN ++ + VH Y +++ GD + + +I+MY
Sbjct: 179 EMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNV--GDEKMEVSMTTALIDMY 236
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
K G + A+R+FD ++ RS+ SW +MI G + DEG + F +M + L PNE T L
Sbjct: 237 CKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLL 296
Query: 383 AVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
++ + CG ++ + H +++ FG+S L+ + GKCG + A+
Sbjct: 297 SLITECGFVGTLDLGKWFHAYLLRNGFGMSLAL--VTALIDMYGKCGQVGYARALF 350
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+L CG + K H Y L++ L L +I+MYGKCG + AR +F+ +
Sbjct: 295 LLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVK 354
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---- 395
+ + W ++I+ YA D+ LF +M ++PN T +++ S C A A++
Sbjct: 355 KKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKW 414
Query: 396 -EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
A+I+ ++ + + L+ + KCG + A+ + + + W +
Sbjct: 415 THAYINRHGLEVDVILET------ALINMYAKCGDVTIARSLFNEAM--QRDIRMWNTMM 466
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
+HG A EL +++ +P I
Sbjct: 467 AGFSMHG---CGKEALELFSEMESHGVEPNDIT 496
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
+L + C + +++H + ++ D+ + N ++ MY KCG + AR VFD M +R
Sbjct: 93 SLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPER 152
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+ SW M+ Y + E L+L +M+ +G++ + +++ + G
Sbjct: 153 DVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFG 200
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 216/394 (54%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + +EL +GV+ + F ++ + C E ++H +++ + D + +
Sbjct: 306 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 365
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+++MYGKCG ++ + ++F+ + R+ +W+ +IN +A +G G E +Q F++M G++P
Sbjct: 366 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 425
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N F+++ +AC A ++E +F SMK GI P EHY ++ G+ G L EA +F
Sbjct: 426 NHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 485
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS----------------- 479
I + +P +P A W +L R+ G +L + A + ++ L+P
Sbjct: 486 ISE-MPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQ 544
Query: 480 ----KADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
KA K + KK S +D + F +P EKL+ L ++KE
Sbjct: 545 WEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKE 604
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y+PDT ++ +++ AKE+ L YHSER+A+A+ LIS PA P+ + KNLR+C DCH A
Sbjct: 605 EGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTA 664
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K + ++ R++IVRDN RFHHF +G+CSCGDYW
Sbjct: 665 FKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L + + + +MY KCG +++A RVFD M + +W MI+GYA NG + + F M+
Sbjct: 156 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 215
Query: 371 KLGLQPNEQ-TFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ GL +Q F +V SA G D IH K+ F + + L+ + K
Sbjct: 216 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN--ALIDMYAKSM 273
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI--DLEDHAEELMVDLDPSKADPKKI 486
+ A + L +P W + + I G I D + A + V+L +P +
Sbjct: 274 DVESASRV----LKIDPGG--WNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEF 327
Query: 487 PTPPPKKRTAISIL 500
K A+ L
Sbjct: 328 TFSSMIKGCAMQAL 341
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V AD F ++ G K +K +H ++ ++ + N +I+MY K + A
Sbjct: 220 VGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESAS 279
Query: 333 RVFDHMADRSMD--SWHL-----MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
RV +D W++ MI+GY + +E L ++ ++R+ G++PNE TF ++
Sbjct: 280 RVL------KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI 333
Query: 386 SACGSADAIEE-AFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
C +E+ A +H + +K++ + ++G LV + GKCG + + Q +
Sbjct: 334 KGCAMQALLEQGAQLHAQVIKTDL----IRDSFVGSTLVDMYGKCGLISLSMQLFNEIEY 389
Query: 443 FEPTAEFWEALRNYARIHG 461
A W A+ N HG
Sbjct: 390 RTDIA--WNAVINVFAQHG 406
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 282 TLFELCGNPKWYENAKKVHD-YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
+L + CG + +H L L N +I MY C + A R+F M
Sbjct: 25 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
R+ SW +++G + N + + L F MR+ G+ P
Sbjct: 85 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 212/406 (52%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAI----ELM--DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
A +A + GK EA+ E+M K ++ ++ + C + E K +H Y L
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ + L + + ++ MYG+CG + +RVFD M DR + SW+ +I+ Y +G G + +Q
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+FE+M G P TF++V AC +EE FE+M + GI P EHY +V +L
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ L EA + + Q + EP + W +L RIHG+++L + A + L+P A
Sbjct: 433 GRANRLDEAAKMV-QDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 485 KIPTPPPKKRTAISILDGKSRLVEFR--------------------------NPTLYRDD 518
+ + + +L+E R NP + +
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIH 551
Query: 519 EKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
L L + MKE Y+P T+ VL++++ E KE+ +L HSE+LA+A+GLI+T P+RI
Sbjct: 552 AFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRIT 611
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH K +S+ + +E++VRD RFH FK+G CSCGDYW
Sbjct: 612 KNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC+EGK+K+AI ++ + + L CG+ +A +VH + L + D L
Sbjct: 56 LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLA 115
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I MY GS+ AR+VFD R++ W+ + G G+E L L+ +M ++G++
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 376 PNEQTFLAVFSACGSADA 393
+ T+ V AC +++
Sbjct: 176 SDRFTYTYVLKACVASEC 193
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYEN----AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
GV++D + + + C + N K++H + + + + +++MY + G
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK--LGLQPNEQTFLAVF 385
+ A VF M R++ SW MI YA NG E L+ F +M + PN T ++V
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC S A+E+ IH ++ G+ LV + G+CG L Q+ ++ +
Sbjct: 293 QACASLAALEQGKLIHGYILRR--GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 445 PTAEFWEALRNYARIHG 461
+ W +L + +HG
Sbjct: 351 VVS--WNSLISSYGVHG 365
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 212/407 (52%), Gaps = 40/407 (9%)
Query: 253 LARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
LA G KEA EL +K VK + F + + + +++H + +
Sbjct: 399 LAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNG 458
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQL 365
D V+ N ++ MY KCGS+ DA+ +FD + D +W ++ GYA G + L+L
Sbjct: 459 FESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKL 518
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F M++ G++PN TF++ +AC +E+ M + GI P ++H+ +V +LG
Sbjct: 519 FWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLG 578
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+CG L EA++ +E+ + W AL + + +++ + E ++ LDP A
Sbjct: 579 RCGRLDEAEKLLERTSQADVIT--WMALLDACKNSKELERGERCAERIMQLDPEVASSYI 636
Query: 484 -------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYR 516
K + + S ++ L F ++ +Y
Sbjct: 637 VLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYL 696
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
+ E+L +K + YV DT VLHD+ QE KE+ L+ HSE+LAIA+GL+STP+ +PLR+
Sbjct: 697 ELERLHW--SIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 754
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLRVC DCH A K++S++ GR++++RD+ R+HHF G CSCGDYW
Sbjct: 755 IKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGN-PKWYENA--KKVHDYFLQSTIRGDLVLN 315
+EA+ L ++ GV+ + F T C P +A K++ ++ + GD +
Sbjct: 303 REALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVA 362
Query: 316 NKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N + MY KCGS+ DAR VF+ ++ R +W+ M+ Y +GLG E +LF+ M
Sbjct: 363 NATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEK 422
Query: 374 L-QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
L +PN+ TF+AV A S +I + IH + + G T L+ + KCG L
Sbjct: 423 LVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN--GFESDTVIQNALLNMYAKCGSLD 480
Query: 432 EAQQFIEQKLPFEPTAEFWEAL 453
+AQ ++ + W +L
Sbjct: 481 DAQAIFDKSSSNQEDVIAWTSL 502
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ + L C +++H + VL N +I MY KCGS+ DA+
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 333 RVFDHM---ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL-QPNEQTFLAVFSAC 388
+ FD + + R + +W+ MI+ + NG E LQLF M G PN TF++V +C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 389 GSADAIEEAFIHFESMKSEFG--ISPGTEH----YLGLVGVLGKCGHLFEAQQFIEQKLP 442
+E + E +++ G + G E LV GK G L +A + +K
Sbjct: 123 -----VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSD 177
Query: 443 FEPTAEF 449
EP+
Sbjct: 178 EEPSTSL 184
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D VL ++ Y + ++ AR FD + + SW+ M Y + E L LFE+M
Sbjct: 254 DNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERML 313
Query: 371 KLGLQPNEQTFLAVFSACG-----SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
G++P+ TF+ +AC +A AI + +S+ E G+ T + +
Sbjct: 314 LEGVRPSVATFITALTACAAYPPQTASAIGK---RIQSLLEEAGLEGDTAVANATLNMYA 370
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
KCG L +A+ E+ P W ++ HG L A EL ++ K
Sbjct: 371 KCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG---LGKEAFELFQAMEAEK----- 422
Query: 486 IPTPPPKKRTAISILDGKS 504
P K T +++LD +
Sbjct: 423 --LVKPNKVTFVAVLDAST 439
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 251 ADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWY--ENAKKVHDYF 303
A ++ + G +EA++L D ++ F ++ + C E+ + +H
Sbjct: 81 AMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 140
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR----SMDSWHLMINGYADNGLG 359
+ + I + + +++ YGK GS+ DA VF +D S+ + MI+ NG
Sbjct: 141 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWP 200
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSAC-----GSADA 393
E L+LF M G +P+ T ++V +AC GSA A
Sbjct: 201 QESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATA 239
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 206/399 (51%), Gaps = 37/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EAI L D+ VK D F ++ + C + + E K VH + +R D
Sbjct: 481 QNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY 540
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L+ + +MY KCG + A VFD M++RS+ SW +MI GY +G + + LF QM G
Sbjct: 541 LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG 600
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ TF+ + SAC A A+EE ++F SM SEFG+ P +H+ +V +L + G L A
Sbjct: 601 IKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGA 659
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
Q I LPF + W AL N RIH ID+ E+ ++D+D +
Sbjct: 660 YQII-TSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAE 718
Query: 483 ----------PKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
+ + +K S ++ ++ F + +YR E ++L
Sbjct: 719 EGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSL 778
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ PD V + KE ++ HSE+LAIA+G+I+T T LRI KNLRVC
Sbjct: 779 VHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCR 836
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ KI S+I GRE+I+RD RFH F++G CSC DYW
Sbjct: 837 DCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLF 284
L++ + P D V S+ + Q G+ E +++ + + V+ D+ ++
Sbjct: 151 LDDACKAFDTMPIRDVVAWSSI--VLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVT 208
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
E C + VH Y ++ I + LNN +I MYGK G + A R+F+++ R
Sbjct: 209 EACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTA 268
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-----AFI 399
W MI+ Y +G E L +F +M++ ++PN+ T + V AC ++E F+
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFV 328
Query: 400 HFESMKSEFG-ISPGTEHYLGLVGVLGKCGHLFEA 433
+M E + P G L C +FE
Sbjct: 329 IRRAMDPELDFLGPALMELYADTGNLRDCHKVFET 363
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ +G+ D+ + CG + + ++H Y +++ D V N +I+MY KC
Sbjct: 393 VQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV-QNALIDMYAKC 451
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A ++F+ + ++S+ +W+ MI G++ NG E + LF+QM ++ ++ TFL+V
Sbjct: 452 GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVI 511
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC +E+ ++H + + +G+ + L + KCG L A ++ E
Sbjct: 512 QACSHLGYLEKGKWVHHKLIM--YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS--E 567
Query: 445 PTAEFWEALRNYARIHGDID 464
+ W + +HG I+
Sbjct: 568 RSIVSWSVMIAGYGMHGQIN 587
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 260 GKVKEAIELMDKGVKADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
G +EA+ L + V D + F ++ + C KVH ++ D V+
Sbjct: 78 GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
++ MYG+ + DA + FD M R + +W ++ + NG EGL +F QM +
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P+ T L+V AC ++ +H ++ E I L+ + GK G L+ A
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRRE--IESNASLNNSLIVMYGKLGDLYSA 255
Query: 434 QQFIE-----QKLPFEPTAE-------FWEALRNYARI 459
++ E P+ P F EAL +A++
Sbjct: 256 ERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKM 293
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDL-VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C + + VH + ++ + +L L ++E+Y G++ D +VF+ + ++++ S
Sbjct: 312 CARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
W+ +I+ + NG +E L LF QM+ GL P+ + + SACG+ +F +
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI-----SFSQLGAQI 426
Query: 406 SEFGISPGTEHYL---GLVGVLGKCGHLFEAQQFIEQ 439
+ I G + L+ + KCG + A + E+
Sbjct: 427 HGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEK 463
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 222/406 (54%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA+E+ + G+ + + +L ++ K+ H + L+
Sbjct: 224 AIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ VL N +I+MY KCG+++ ARR+FD+M +R+ SW+ M+ GY+ +GLG E L+LF
Sbjct: 284 ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 367 EQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS-EFGISPGTEHYLGLVGVL 424
MR + ++P+ T LAV S C + F+ M + E+G PGTEHY +V +L
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML 403
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ G + EA +FI +++P +PTA +L R+H +D+ + +++++P A
Sbjct: 404 GRAGRIDEAFEFI-KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNY 462
Query: 485 KIPT---------------PPPKKRTAISILDGKSRL--------VEFRNPTLYRDDEKL 521
I + + A++ G+S + + T R +E L
Sbjct: 463 VILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVL 522
Query: 522 KALNQ----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ + MK++ YVPD VL+D+D+E KE+ LL HSE+LA+ +GLI+T P+R+
Sbjct: 523 AKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVF 582
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCHN KI S++ RE+ +RD RFH DG CSCGDYW
Sbjct: 583 KNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 249 SVADLARLCQEGKVKEAI-ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
++ +++LC G+++EA+ E+ G + + L C + + + ++VH + +++
Sbjct: 23 TILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTR 82
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
L +++ YGKC + DAR+V D M ++++ SW MI+ Y+ G E L +F
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAI 394
+M + +PNE TF V ++C A +
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGL 169
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 19/259 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++R Q G EA+ + + +++D F T+ C K++H ++
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + +++MY K G + +AR +F+ + +R + S +I GYA GL +E L++F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
++ G+ PN T+ ++ +A ++ H ++ E ++ L+ +
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYS 300
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
KCG+L A++ + +P E TA W A+ HG +++L D K+
Sbjct: 301 KCGNLSYARRLFDN-MP-ERTAISWNAMLVGYSKHG-------LGREVLELFRLMRDEKR 351
Query: 486 IPTPPPKKRTAISILDGKS 504
+ P T +++L G S
Sbjct: 352 V---KPDAVTLLAVLSGCS 367
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 234/447 (52%), Gaps = 45/447 (10%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMD 270
S+ + G+ +++ ++ P D V ++ ++ Q G EA++ ++
Sbjct: 170 SWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTM--ISGCLQVGYFMEALDIFHNMLA 227
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
KG+ + + C N + + +H Y ++ I+ + L +I+MY KCG +
Sbjct: 228 KGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEF 287
Query: 331 ARRVFDH--MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A ++F+ R + W+ MI G+A +G E +++FEQM+ + PN+ TF+A+ +AC
Sbjct: 288 ASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNAC 347
Query: 389 GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
+ +EE +FESM S + + P EHY LV +LG+ G L EA++ I + P
Sbjct: 348 SHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISS-MHLTPDVA 406
Query: 449 FWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------SKADPKKIP 487
W AL + +IH D ++ + +++ +LDP ++ +KI
Sbjct: 407 IWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 488 TPPPKKRTAISILDGKSRLVEF----------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
KK S ++ +F + L+ D+ + ++K + Y+P++
Sbjct: 467 ESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDE----MITKLKIAGYIPESG 522
Query: 538 YVLHDIDQ-EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VL DID E +E ALL HSE+LAIA+GL++T +TP+RI+KNLRVC DCH AIK +S++
Sbjct: 523 EVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKV 582
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD R+HHFKDG CSC DYW
Sbjct: 583 YDREIIVRDRIRYHHFKDGTCSCNDYW 609
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F F+ CG+ ++V + ++ + +L + N +I MY + DAR+VFD
Sbjct: 105 FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSP 164
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQ------------------------------- 368
+R M SW++M++GYA G DE QLF++
Sbjct: 165 NRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHN 224
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M G+ PNE T + +AC + A+++ ++H K+ I GL+ + KC
Sbjct: 225 MLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKN--NIQMNERLLAGLIDMYAKC 282
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L A + + W A+ +HG A E+ + K P K+
Sbjct: 283 GELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGK---SKEAIEVFEQMKIEKVSPNKV 338
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 212/407 (52%), Gaps = 40/407 (9%)
Query: 253 LARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
LA G KEA EL +K VK + F + + + +++H + +
Sbjct: 533 LAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNG 592
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQL 365
D V+ N ++ MY KCGS+ DA+ +FD + D +W +I GYA G + L+L
Sbjct: 593 FESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKL 652
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F M++ G++PN TF++ +AC +E+ M + GI P ++H+ +V +LG
Sbjct: 653 FWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLG 712
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-- 483
+CG L EA++ +E+ + W AL + + +++ + E ++ LDP A
Sbjct: 713 RCGRLDEAEKLLERTSQADVIT--WMALLDACKNSKELERGERCAERIMQLDPEVASSYI 770
Query: 484 -------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYR 516
K + + S ++ L F ++ +Y
Sbjct: 771 VLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYL 830
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
+ E+L +K + YV DT VLHD+ QE KE+ L+ HSE+LAIA+GL+STP+ +PLR+
Sbjct: 831 ELERLHW--SIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 888
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLRVC DCH A K++S++ GR++++RD+ R+HHF G CSCGDYW
Sbjct: 889 IKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGN-PKWYENA--KKVHDYFLQSTIRG 310
Q + +EA+ L ++ GV+ + F T C P +A K++ ++ + G
Sbjct: 432 QHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG 491
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D + N + MY KCGS+ DAR VF+ + A R +W+ M+ Y +GLG E +LF+
Sbjct: 492 DTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQA 551
Query: 369 MRKLGL-QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
M L +PN+ TF+AV A S +I + IH + + G T L+ + K
Sbjct: 552 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN--GFESDTVIQNALLNMYAK 609
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEAL 453
CG L +AQ ++ + W +L
Sbjct: 610 CGSLDDAQAIFDKSSSNQEDVIAWTSL 636
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 258 QEGKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
+ G+ +A+EL D+ V+ + L C +++H + VL N
Sbjct: 121 EHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGN 180
Query: 317 KVIEMYGKCGSMTDARRVFDHM---ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+I MY KCGS+ DA++ FD + + R + +W+ MI+ + NG E LQLF M + G
Sbjct: 181 ALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDG 240
Query: 374 L-QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFG--ISPGTEH----YLGLVGVLGK 426
PN TF++V +C +E + E +++ G + G E LV GK
Sbjct: 241 APPPNSVTFVSVLDSC-----VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGK 295
Query: 427 CGHLFEAQQFIEQKLPFEPTAEF 449
G L +A + +K EP+
Sbjct: 296 LGSLDDAWEVFLRKGDEEPSTSL 318
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL----VLNNKVIEMYGKCGSMTDARR 333
S + L + CG + + +++H + L I DL L + +I M+ KCG++ +A
Sbjct: 44 STYGCLLQACGRLRALKQGQRLHAHILSRRI--DLHNHSFLASDLIVMHAKCGNLAEAEA 101
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ D A S+ S MI + ++G D+ ++LF++M ++PN +A+ +AC
Sbjct: 102 LADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGN 156
Query: 394 IEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEF- 449
+ IH + +F LG L+ + KCG L +A+Q + +LP +
Sbjct: 157 LAAGRRIHSQISDRDFE----ENSVLGNALISMYSKCGSLIDAKQAFD-RLPRASKRDVV 211
Query: 450 -WEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
W A+ + +G A +L D+D A PPP T +S+LD
Sbjct: 212 TWNAMISAFLRNGS---AREALQLFRDMDRDGA-------PPPNSVTFVSVLD 254
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 18/199 (9%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D VL ++ Y + + AR FD + + SW+ M Y + E L LFE+M
Sbjct: 388 DNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERML 447
Query: 371 KLGLQPNEQTFLAVFSACG-----SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
G++P+ TF+ +AC +A AI + +S+ E G+ T + +
Sbjct: 448 LEGVRPSVATFITALTACAAYPPQTASAIGK---RIQSLLEEAGLEGDTAVANATLNMYA 504
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
KCG L +A+ E+ P W ++ HG L A EL ++ K
Sbjct: 505 KCGSLADARAVFERISPARRDCITWNSMLAAYGHHG---LGKEAFELFQAMEAEK----- 556
Query: 486 IPTPPPKKRTAISILDGKS 504
P K T +++LD +
Sbjct: 557 --LVKPNKVTFVAVLDAST 573
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 251 ADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWY--ENAKKVHDYF 303
A ++ + G +EA++L D ++ F ++ + C E+ + +H
Sbjct: 215 AMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 274
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR----SMDSWHLMINGYADNGLG 359
+ + I + + +++ YGK GS+ DA VF D S+ + MI+ NG
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWP 334
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSAC-----GSADA 393
E L+LF M G +P+ T ++V +AC GSA A
Sbjct: 335 QESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATA 373
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 201/365 (55%), Gaps = 29/365 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C Y N ++ H L+ L N +I MY KCG + +AR+VF M SW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ +I +G G E + ++E+M K G++P+ T L V +AC A +++ +F+SM++
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+ I PG +HY L+ +L + G +A+ IE LPF+PTAE WEAL + R+HG+++L
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIES-LPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 467 DHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSR 505
A + + L P K + KK A S ++ +++
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 506 LVEFR-NPTLYRDDEKLKALNQ-----MKESTYVPDTRYVLHDIDQEA-KEQALLYHSER 558
+ F + T + + E + Q M+ YVPDT +VLHD++ + KE L HSE+
Sbjct: 666 VHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEK 725
Query: 559 LAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
+A+A+GL+ P T +RI KNLR CGDCHN + +S +V R++I+RD KRFHHF++G+CS
Sbjct: 726 IAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECS 785
Query: 619 CGDYW 623
CG++W
Sbjct: 786 CGNFW 790
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL- 314
G +EA+E++ + G++ D + ++ C + K+VH Y L+ R D
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR---REDFSFH 321
Query: 315 -NNKVIEMYGKCGSMTDARRVFD-------------------------------HMADRS 342
+N ++ +Y KCG +AR +F+ M +++
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI--- 399
+ SW +MI+G A+NG G+EGL+LF M++ G +P + F +C A+ A+
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC----AVLGAYCNGQ 437
Query: 400 --HFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
H + +K F +S G L+ + KCG + EA+Q + + +P + W AL
Sbjct: 438 QYHAQLLKIGFDSSLSAGN----ALITMYAKCGVVEEARQ-VFRTMPCLDSVS-WNALIA 491
Query: 456 YARIHG 461
HG
Sbjct: 492 ALGQHG 497
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 118/302 (39%), Gaps = 72/302 (23%)
Query: 212 ARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVK-------- 263
AR + ++S P+++ C +GD L V + A +C V
Sbjct: 68 ARQLFDEISE----PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGF 123
Query: 264 -------EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKV---HDYFLQSTIR 309
AI L K G K D F ++ L G ++ K+ H L+S
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASV--LAGLALVADDEKQCVQFHAAALKSGAG 181
Query: 310 GDLVLNNKVIEMYGKCGS----MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
++N ++ +Y KC S + AR+VFD + ++ SW M+ GY NG D G +L
Sbjct: 182 YITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241
Query: 366 FEQM-----------------------------RKL---GLQPNEQTFLAVFSACGSADA 393
E M R++ G++ +E T+ +V AC +A
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 394 IEEAF-IHFESMKSEFGISPGTEHYL-GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
++ +H ++ E + H+ LV + KCG EA+ E K+P + W
Sbjct: 302 LQLGKQVHAYVLRRE----DFSFHFDNSLVSLYYKCGKFDEARAIFE-KMPAKDLVS-WN 355
Query: 452 AL 453
AL
Sbjct: 356 AL 357
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 227/445 (51%), Gaps = 32/445 (7%)
Query: 210 PQARN--SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI- 266
P+ R+ ++ +V G+ + ++ P D++ ++ +E +V +
Sbjct: 208 PRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVF 267
Query: 267 -ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++GV+ + + T E+ K VH+ +S + + + +++MY KC
Sbjct: 268 RNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKC 327
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR VFD M R + +W+ MI G A +GLG + ++LFE+ GL P TF+ V
Sbjct: 328 GCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVL 387
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+ C + + E +F+ + ++ I P EHY +V +LG+ G + EA + IE + P
Sbjct: 388 NGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIE-GMHIAP 446
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------KADP--------K 484
W + + + HG +DL +++LDP+ KA+ K
Sbjct: 447 DPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRK 506
Query: 485 KIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD-----EKLKALNQ-MKESTYVPDTRY 538
+ + K S+++ ++ +F Y D + L +N+ + E+ YVPD
Sbjct: 507 LMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSS 566
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHDI +E K A+ HSERLAIAYG I A +P+RI+KNLRVCGDCH K+++ +
Sbjct: 567 VLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQ 626
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHH K+GKCSC DYW
Sbjct: 627 REIIVRDGSRFHHMKEGKCSCLDYW 651
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 85/240 (35%), Gaps = 48/240 (20%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR------------------------- 333
VH +++ GDL + N ++ YG G + RR
Sbjct: 168 VHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAG 227
Query: 334 -------VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
VFD M R SW ++ GY + L +F M + G++PN+ + S
Sbjct: 228 MMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALS 287
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
A +E F+H +S G+ LV + KCG + A++ + +
Sbjct: 288 AAARLGLLEHGKFVHNVVQRS--GMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDV 345
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSR 505
A W A+ HG L A EL P + T + +L+G SR
Sbjct: 346 FA--WNAMICGLAAHG---LGRDAVELFERFISEGLSPTNV--------TFVGVLNGCSR 392
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 216/394 (54%), Gaps = 28/394 (7%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + +EL +GV+ + F ++ + C E ++H +++ + D + +
Sbjct: 225 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 284
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+++MYGKCG ++ + ++F+ + R+ +W+ +IN +A +G G E +Q F++M G++P
Sbjct: 285 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 344
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
N F+++ +AC A ++E +F SMK GI P EHY ++ G+ G L EA +F
Sbjct: 345 NHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 404
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS----------------- 479
I + +P +P A W +L R+ G +L + A + ++ L+P
Sbjct: 405 ISE-MPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQ 463
Query: 480 ----KADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKE 529
KA K + KK S +D + F +P EKL+ L ++KE
Sbjct: 464 WEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKE 523
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
Y+PDT ++ +++ AKE+ L YHSER+A+A+ LIS PA P+ + KNLR+C DCH A
Sbjct: 524 EGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTA 583
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K + ++ R++IVRDN RFHHF +G+CSCGDYW
Sbjct: 584 FKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+L + + + +MY KCG +++A RVFD M + +W MI+GYA NG + + F M+
Sbjct: 75 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 134
Query: 371 KLGLQPNEQ-TFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ GL +Q F +V SA G D IH K+ F + + L+ + K
Sbjct: 135 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN--ALIDMYAKSM 192
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI--DLEDHAEELMVDLDPSKADPKKI 486
+ A + L +P W + + I G I D + A + V+L +P +
Sbjct: 193 DVESASRV----LKIDPGG--WNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEF 246
Query: 487 PTPPPKKRTAISIL 500
K A+ L
Sbjct: 247 TFSSMIKGCAMQAL 260
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V AD F ++ G K +K +H ++ ++ + N +I+MY K + A
Sbjct: 139 VGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESAS 198
Query: 333 RVFDHMADRSMD--SWHL-----MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
RV +D W++ MI+GY + +E L ++ ++R+ G++PNE TF ++
Sbjct: 199 RVL------KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI 252
Query: 386 SACGSADAIEE-AFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
C +E+ A +H + +K++ + ++G LV + GKCG + + Q +
Sbjct: 253 KGCAMQALLEQGAQLHAQVIKTDL----IRDSFVGSTLVDMYGKCGLISLSMQLFNEIEY 308
Query: 443 FEPTAEFWEALRNYARIHG 461
A W A+ N HG
Sbjct: 309 RTDIA--WNAVINVFAQHG 325
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 212/406 (52%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAI----ELMD--KGVKADASCFYTLFELCGNPKWYENAKKVHDYFL 304
A +A + GK EA+ E+M K ++ ++ + C + E + +H Y L
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYIL 312
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+ + L + + ++ MYG+CG + +RVFD M DR + SW+ +I+ Y +G G + +Q
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQ 372
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+FE+M G P TF++V AC +EE FESM + GI P EHY +V +L
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLL 432
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ L EA + + Q + EP + W +L RIHG+++L + A + L+P A
Sbjct: 433 GRANRLDEAAKMV-QDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 485 KIPTPPPKKRTAISILDGKSRLVEFR--------------------------NPTLYRDD 518
+ + + +L+E R NP + +
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIH 551
Query: 519 EKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
L L + MKE Y+P T+ VL++++ E KE+ +L HSE+LA+A+GLI+T P+RI
Sbjct: 552 AFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRIT 611
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH K +S+ + +E++VRD RFH FK+G CSCGDYW
Sbjct: 612 KNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC+EGK+K+A+ ++ + + L CG+ + +VH + L + D L
Sbjct: 56 LCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLA 115
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I MY GS+ AR+VFD R++ W+ + G G+E L L+ +M ++G++
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 376 PNEQTFLAVFSACGSADA 393
+ T+ V AC +++
Sbjct: 176 SDRFTYTYVLKACVASEC 193
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYEN----AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
GV++D + + + C + + K++H + + + + +++MY + G
Sbjct: 173 GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGC 232
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM--RKLGLQPNEQTFLAVF 385
+ A VF+ M R++ SW MI YA NG E L+ F +M PN T ++V
Sbjct: 233 VDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVL 292
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC S A+E+ IH ++ G+ LV + G+CG L Q+ ++ +
Sbjct: 293 QACASLAALEQGRLIHGYILRR--GLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRD 350
Query: 445 PTAEFWEALRNYARIHG 461
+ W +L + +HG
Sbjct: 351 VVS--WNSLISSYGVHG 365
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 203/381 (53%), Gaps = 30/381 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G++ + L C N VH + L++ I+ + + ++MY KCG + A
Sbjct: 361 GIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLA 420
Query: 332 RRVFDHMADRSMDS--WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+VFD M + DS + MI G+A +G G++ L+L+ +M+ GL P+ TF+ AC
Sbjct: 421 CQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACS 480
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+EE F+SMK G+ P EHY L+ +LG+ G L EA++++ +P +P A
Sbjct: 481 HVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLAD-MPMKPNAVL 539
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTPPP- 491
W +L ARIHG++ + + A +++L+P + D K++
Sbjct: 540 WRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKH 599
Query: 492 ---KKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHD 542
K S+++ K + EF +P K+ +N +++E + T L D
Sbjct: 600 HGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFD 659
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+++E KE L YHSERLAIA+ LI++P+ +RIIKNLRVCGDCH K++S RE+I
Sbjct: 660 LEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREII 719
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
VRD RFHHFKDG CSC DYW
Sbjct: 720 VRDRNRFHHFKDGSCSCLDYW 740
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 27/195 (13%)
Query: 268 LMDKGVKADASCFYTLFE-LCGNPKWYENAKKVHDY---FLQSTIRGDLVLNNKVIEMYG 323
L +K ++ ++ F +LF+ C N W+ +H + FLQ D + ++ Y
Sbjct: 241 LTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPF--DNFVQASLLNFYA 298
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYA-------------DNGLGDEGLQLFEQMR 370
K G M +R +FD + + + +W++++N YA D E L LF M+
Sbjct: 299 KYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQ 358
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGIS--PGTEHYLGLVGVLGKC 427
+G++PNE T +A+ SAC + A+ + F +H ++++ ++ GT V + KC
Sbjct: 359 VIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGT----AFVDMYSKC 414
Query: 428 GHLFEAQQFIEQKLP 442
G L A Q + K+P
Sbjct: 415 GCLNLACQVFD-KMP 428
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 213/386 (55%), Gaps = 45/386 (11%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN----NKVIEMYG 323
L K V D + TLF C + A K+ D + T++ L+LN N I MY
Sbjct: 495 LSQKDVTPDWVTYVTLFRGCADI----GANKLGDQIIGHTVKAGLILNVSVANAAITMYS 550
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG +++A+++FD + + + SW+ MI GY+ +G+G + + F+ M G +P+ +++A
Sbjct: 551 KCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 610
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
V S C + ++E ++F+ M GISPG EH+ +V +LG+ GHL EA+ I+ K+P
Sbjct: 611 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID-KMPM 669
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDL----------------DPSKADP---- 483
+PTAE W AL + +IHG+ +L + A + + +L D K+D
Sbjct: 670 KPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQV 729
Query: 484 -KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALNQMKESTYVPDTR 537
K + KK S ++ ++++ F+ +P + KL L M++ ++ R
Sbjct: 730 RKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDEL--MEKIAHLGYVR 787
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
++ ++HSE+LA+A+G++S PA P+ I+KNLR+CGDCH IK++S +
Sbjct: 788 --------TESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVT 839
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE ++RD RFHHFK G CSCGDYW
Sbjct: 840 DREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 253 LARLCQEGKVKEA----IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L Q G+V+EA +E+ KGV+ D++ + + C K++H ++S
Sbjct: 242 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 301
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D + + +IE+Y KCGS +A+RVF+ + DR+ SW ++I G + ++LF Q
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ 361
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
MR + ++ + S C
Sbjct: 362 MRAELMAIDQFALATLISGC 381
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N ++ Y K GS++DA +FD M R + SW+ +++GY +GL+ F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 371 KLG-LQPNEQTFLAVFSACGSADAIEEA------FIHFESMKSEFGISPGTEHYLGLVGV 423
+ G PN TF V +CG+ E A F F +F P E LV +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKF-----DFWGDPDVET--ALVDM 182
Query: 424 LGKCGHL-FEAQQF--IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
+CG++ F ++ F IE+ F + L YA+++G DHA E D+
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNS----MLAGYAKLYG----IDHAIEYFEDM 230
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
TL C N +++H L+S +V++N +I +Y KCG + +A VF M++R
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 435
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW MI Y+ G + + F+ M N T+ A+ A A E+ +
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGMD----TRNAITWNAMLGAYIQHGAEEDGLKMY 491
Query: 402 ESMKSEFGISPGTEHYLGL 420
+M S+ ++P Y+ L
Sbjct: 492 SAMLSQKDVTPDWVTYVTL 510
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 34/192 (17%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
+A F + + CG E A ++ F + GD + +++M+ +CG + A R+F
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196
Query: 336 ------------------------DH-------MADRSMDSWHLMINGYADNGLGDEGLQ 364
DH MA+R + SW++MI + +G E L
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGV 423
L +M + G++ + T+ + +AC ++ +H + ++S I P L+ +
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS--ALIEL 314
Query: 424 LGKCGHLFEAQQ 435
KCG EA++
Sbjct: 315 YAKCGSFKEAKR 326
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 220/441 (49%), Gaps = 36/441 (8%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMD 270
++ V G+ + + P D+V +V + +EG+ + A+ ++
Sbjct: 201 TWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTV--IGGYVKEGEPEVALGVFKNMVA 258
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GVKA+ + T E K VH+ + + + L +I+MY KCGS+
Sbjct: 259 QGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAA 318
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A+ VFD M R + +W+ MI G A +GLG + +QLFE+ G P TF+ V +AC
Sbjct: 319 AKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSR 378
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE-QKLPFEPTAEF 449
++E +F+ M ++ I EHY +V +L + G + EA + IE ++P +P
Sbjct: 379 TGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPV--L 436
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPKK----------IPT 488
W + + + HG +DL +++LDP+ A KK +
Sbjct: 437 WGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSN 496
Query: 489 PPPKKRTAISILDGKSRLVEFRNPTLYRDDEK-----LKALNQ-MKESTYVPDTRYVLHD 542
K S+++ + +F + D L +N+ + E+ YVPD VLHD
Sbjct: 497 RGTSKSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHD 556
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
I E K A+ HSERLAIAYG I A +P+RI+KNL VCGDCH K+++++ GRE++
Sbjct: 557 IGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIV 616
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
VRD RFHH KDGKCSC DYW
Sbjct: 617 VRDGSRFHHMKDGKCSCHDYW 637
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ +CG+ +KV D + I D+V N V+ Y + G + AR VFD M R
Sbjct: 176 FYGVCGD---VAAMRKVFD---ELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRD 229
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHF 401
SW +I GY G + L +F+ M G++ NE + SA +E+ F+H
Sbjct: 230 EVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVH- 288
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
E +K G++ L+ + KCG + A++ +
Sbjct: 289 EVVK-RVGMTMSVNLGAALIDMYSKCGSVAAAKEVFD 324
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 216/386 (55%), Gaps = 32/386 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M KG + D+ F T+ C + E +VH +++ + D+V+ + +++MY KCG
Sbjct: 1156 MMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGR 1215
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT-FLAVFS 386
+ A R F+ M R++ SW+ MI+GYA +G G++ L+LF +M G P+ L V S
Sbjct: 1216 IDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLS 1275
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE F HF+SM + +SP EH+ +V +LG+ G L E FI +P +P
Sbjct: 1276 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI-NSMPMKPN 1334
Query: 447 AEFWE-ALRNYARIHG-DIDLEDHAEELMVDLDPSKA-----------------DPKK-- 485
W L R +G + +L A E++++L+P A D K
Sbjct: 1335 VLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKAR 1394
Query: 486 --IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTR 537
+ KK S + K + F +P +KL+ LN +M+++ Y+P T+
Sbjct: 1395 XAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTK 1454
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
Y L D++ E KE+ L YHSE++A+A+ L A P+RI+KNLRVCGDCH+A +S+IV
Sbjct: 1455 YALFDLELENKEELLSYHSEKIAVAFVLTRQSA-LPIRIMKNLRVCGDCHSAFGYISKIV 1513
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
GR++++RD+ RFHHF+DGKCSCGDYW
Sbjct: 1514 GRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
VK +E+M G F + + +E + ++H L+ + D + N ++
Sbjct: 1048 VKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSC 1107
Query: 322 YGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
YGKCG M + ++F M++ R SW+ MI+GY N L + + L M + G + + T
Sbjct: 1108 YGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFT 1167
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
F V SAC S +E +H +++ E + G+ LV + KCG + A +F
Sbjct: 1168 FATVLSACASVATLERGMEVHACGIRACMESDVVVGS----ALVDMYSKCGRIDYASRFF 1223
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
E +P + + YAR HG
Sbjct: 1224 EL-MPLRNVYSWNSMISGYAR-HG 1245
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E A+++H ++ G+L L+N +I +Y + G + A+++FD M++R++ +W +I+GY
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG DE F M + G PN F + AC
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 655
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKC-GSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++H ++ D+V+ N +I MYG C S DAR VFD + R+ SW+ +I+ Y+
Sbjct: 668 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRR 727
Query: 357 GLGDEGLQLFEQMRKLGL----QPNEQTFLAVFS-ACGSAD 392
G LF M+K GL +PNE TF ++ + AC S D
Sbjct: 728 GDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVD 768
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 296 AKKVHDYFLQSTIRGDLV-LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
++VH + +++ + + V + N ++ MY K G++ DA VF+ M ++ SW+ +I+G
Sbjct: 878 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 937
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
N ++ + F +MR+ G P+ T ++ S+C S I
Sbjct: 938 QNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWI 977
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E + + + G + C + W +++H L+ + D+ ++N
Sbjct: 941 CSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSN 1000
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG-DEGLQLFEQMRKLGLQ 375
++ +Y + G T+ +VF M + SW+ +I +D+ + ++ F +M + G
Sbjct: 1001 ALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWG 1060
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ TF+ + SA S ++ E ++ ++ +S T L+ GKCG + E ++
Sbjct: 1061 LSRVTFINILSAVSSL-SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEK 1119
Query: 436 FIEQ 439
+
Sbjct: 1120 IFAR 1123
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 202/370 (54%), Gaps = 29/370 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C + +H ++S I ++ + + +++MYGKCG + DA +VF M +R
Sbjct: 321 SVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER 380
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
++ +W+ MI GYA G L +F+ M R G PN T + V +AC ++ +
Sbjct: 381 NLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYEL 440
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
F++M+ FG+ P TEHY +V +LG+ G A + I Q++P P+ W AL ++H
Sbjct: 441 FDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEII-QRMPMRPSISVWGALLGACKMH 499
Query: 461 GDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAISI 499
G +L A E + +LDP + K++ KK S
Sbjct: 500 GKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSW 559
Query: 500 LDGKSRL-VEFRNPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQALL 553
+ K+ + V + T + + +++AL QM+ S Y+PDT+Y L+D+++E KE +
Sbjct: 560 ITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVF 619
Query: 554 YHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFK 613
HSE+LA+A+GLI P P+RI KNLR+C DCH A K +S IVGRE+IVRDN RFH+FK
Sbjct: 620 QHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFK 679
Query: 614 DGKCSCGDYW 623
+CSC DYW
Sbjct: 680 QFECSCKDYW 689
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
F C + ++ H + + D+ ++N +++ YGKC AR VFD M R
Sbjct: 220 AFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVR 279
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW MI YA +G ++ L ++ R G +P + +V + C + +H
Sbjct: 280 NSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALH 339
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+++S I LV + GKCG + +A+Q
Sbjct: 340 AVAVRS--CIDANIFVASALVDMYGKCGGVEDAEQ 372
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 287 CGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
C P+ ++H L+ + GD ++ ++MY K G + ARR+F+ M +R++ +
Sbjct: 123 CAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIA 182
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
W+ ++ +G E + + +R+ G PN + A F+AC A
Sbjct: 183 WNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGA 228
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 212/385 (55%), Gaps = 32/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++++G++ ++S + C + +++H +ST+ D+ +I MY KCG
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DA ++F+ M + + +W+ MI+GYA +G D+ L LF +M ++P+ TF+AV A
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C A + +FESM ++ + P +HY +V +LG+ G L EA + I + +PF P A
Sbjct: 395 CNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLI-RSMPFRPHA 453
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKI 486
+ L R+H +++L + A E ++ L+ A K++
Sbjct: 454 AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRM 513
Query: 487 PTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKE--------STYVPDTRY 538
K S ++ ++++ FR+ R +L ++++ + + Y P+ +
Sbjct: 514 KESNVVKVPGYSWIEIRNKVHHFRSSD--RIHPELDSIHKKLKELEKKMKLAGYKPELEF 571
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
LH++++E KE+ LL+HSE+LA+A+G I P + +++ KNLR+CGDCH AIK +S I
Sbjct: 572 ALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEK 631
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHHFKDG CSCGDYW
Sbjct: 632 REIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF-DHMADRSMDSWHLMINGY 353
+ +K +F + +RG +V +I Y K + A +F D ++++ +W+ MI+GY
Sbjct: 201 DLEKASHFFKVAPVRG-VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP 412
+N ++GL+LF M + G++PN + C A++ IH + S+ +
Sbjct: 260 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH--QIVSKSTLCN 317
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
L+ + KCG L +A + E + A W A+ + HG+ D
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA--WNAMISGYAQHGNAD 367
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 213/386 (55%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ D G+K + + C N + K++H Y + D+ + ++ +Y KCG
Sbjct: 302 KMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCG 361
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ +R VF+ M + + +W+ MI + +G G E L LF +M G++PN TF+ V S
Sbjct: 362 DLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLS 421
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
C + +E + F SM SE I+P +HY +V VL + G L EA FI +K+P EPT
Sbjct: 422 GCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFI-RKMPIEPT 480
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------------DPKKI 486
A W AL R++ +++L A + +++P A + +K+
Sbjct: 481 AAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKM 540
Query: 487 PTPPPKKRT-AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+T S + K+++ F + +YR +++ +M+ Y P+T
Sbjct: 541 MRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEID--EKMRLDGYQPNTD 598
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
+VL ++DQE +E+ L HSERLA+A+G++++ +T +R+ KNLR+CGDCHNAIK++++IV
Sbjct: 599 FVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIV 658
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
G ++IVRD+ RFHHF+DG C+C D+W
Sbjct: 659 GMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G K+AI+ L+ + V+ D ++ + C AKK+HD +Q DLV
Sbjct: 54 QHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLV 113
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+M+GKC + AR VFD M + + SW M Y + G+ +G+ LF +M G
Sbjct: 114 LGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNG 173
Query: 374 LQPNEQTFLAVFSACGSADAIE 395
++ N T ++ AC AD I+
Sbjct: 174 IRANSLTVSSILPAC--ADYIK 193
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
+C++G + E+ G++A++ ++ C + + + ++VH + L++ + G++ ++
Sbjct: 158 MCRQG-ILLFREMGLNGIRANSLTVSSILPACAD--YIKLGREVHGFILRNEMEGNVYVS 214
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ ++ MY + AR VFD M R + SW++M+ Y N + GL LF QMRK G++
Sbjct: 215 SALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIK 274
Query: 376 PNEQTFLAVFSAC 388
N+ ++ A S C
Sbjct: 275 LNQASWNAAISGC 287
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
K+I+ G + A +FD + + + +W ++I+G+ +G + + ++ + ++P
Sbjct: 16 KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRP 75
Query: 377 NEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
++ L+V AC S D + IH +++ +FG + L+ + GKC
Sbjct: 76 DKFVLLSVAKACAASGDLVVAKKIHDDAI--QFGFNKDLVLGNALIDMFGKC 125
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 218/406 (53%), Gaps = 37/406 (9%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G+ EA+ L G++ D+ + C N + + + VH + ++
Sbjct: 280 AMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR- 338
Query: 307 TIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
R D +L I+MY KCGS+ A+ +F+ ++DR + W+ MI +G G + L
Sbjct: 339 --RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALT 396
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
LF++M + G++P+ TF ++ SA + +EE + F M + F I+P +HY+ LV +L
Sbjct: 397 LFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLL 456
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
+ G + EA + + EPT W AL + + ++L + + +++L P
Sbjct: 457 ARSGLVEEASDLLTS-MKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVL 515
Query: 485 KIPT---PPPKKRTAISIL------DGKSRL-----VEFRNP--TLYRDDE--------- 519
+ + KK + + G ++ +E R +D+
Sbjct: 516 ALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIV 575
Query: 520 -KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
K+ L+ +M++ Y+P T +V HD+++E KEQ L YHSERLAIA+GL++T T L II
Sbjct: 576 SKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVII 635
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH+AIK +S+I RE++VRD KRFHHFKDG CSC DYW
Sbjct: 636 KNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+ + GVK D + + C + VH + L+ +R D+V +++MY K G
Sbjct: 199 RMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNG 258
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A RVF M R+ SW MI+G+A NG DE L+LF M+ G+QP+ ++
Sbjct: 259 LLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALL 318
Query: 387 ACGSADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC + ++ +H F + +F GT + + KCG L AQ + +
Sbjct: 319 ACSNIGFLKLGRSVHGFIVRRFDFNCILGTAA----IDMYSKCGSLASAQMLFN--MISD 372
Query: 445 PTAEFWEALRNYARIHG 461
W A+ HG
Sbjct: 373 RDLILWNAMIACCGAHG 389
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D++ F C + V D + + D+ + + ++ +Y + G+M DA +VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
M R +W M+ G+ G + +Q++ +MR+ G++ +E + V AC +A
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 201/395 (50%), Gaps = 67/395 (16%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K ++ GV D ++ C E K+VH F++ +R L +NN
Sbjct: 496 HEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNS 555
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ MY KCG + DA +F M R + +W +I GYA NG G + L+ F+QM+K+
Sbjct: 556 LVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKI----- 610
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+GI PG EHY ++ + G+ G L EA++ +
Sbjct: 611 ------------------------------YGIEPGPEHYACMIDLFGRLGKLDEAKEIL 640
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP-------------- 483
Q + +P A W+AL R+HG+++L + A + +L+P A P
Sbjct: 641 NQ-MDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKW 699
Query: 484 -------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
+ + + K S ++ SRL F R +Y +++ + ++K
Sbjct: 700 DDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEI--IRRIK 757
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E YVPD + LHD+D+E KE L YHSE+LA+A+GL+++P P+RI KNLRVCGDCH+
Sbjct: 758 EVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHS 817
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A+K +S + R +I+RD+ FHHFK+G+CSC DYW
Sbjct: 818 AMKYISGVFTRHIILRDSNCFHHFKEGECSCEDYW 852
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 257 CQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C+ G+ EA +L + G K ++ C + + +H Y +++ ++
Sbjct: 188 CRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNV 247
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS--WHLMINGYADNGLGDEGLQLFEQMR 370
+ +++MY KC +++A +F +A + W M+ GYA NG + ++ F M
Sbjct: 248 YVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMH 307
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G++ N+ TF ++ +AC S A F +H +++ FG + + LV + KC
Sbjct: 308 TEGVESNQFTFPSILTACSSVSA--HCFGEQVHGCIVRNGFGCNAYVQS--ALVDMYAKC 363
Query: 428 GHLFEAQQFIE 438
G L A++ +E
Sbjct: 364 GDLGSAKRVLE 374
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +AIE +GV+++ F ++ C + + ++VH +++ +
Sbjct: 292 QNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAY 351
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY KCG + A+RV ++M D + SW+ MI G +G +E + LF++M
Sbjct: 352 VQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARN 411
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF 408
++ + TF +V + C I+ +H +K+ F
Sbjct: 412 MKIDHYTFPSVLNCC-IVGRIDGKSVHCLVIKTGF 445
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G +EAI L K +K D F ++ C + + K VH +++ +
Sbjct: 393 RHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRI--DGKSVHCLVIKTGFENYKL 450
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
++N +++MY K + A VF+ M ++ + SW ++ GY NG +E L+ F MR G
Sbjct: 451 VSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISG 510
Query: 374 LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P++ ++ SAC +E +H + +K G+ LV + KCG L +
Sbjct: 511 VSPDQFIVASILSACAELTLLEFGKQVHSDFIK--LGLRSSLSVNNSLVTMYAKCGCLDD 568
Query: 433 AQQ-FIEQKLPFEPTAEFWEAL-RNYAR 458
A F+ + T W AL YAR
Sbjct: 569 ADAIFVSMHVRDVIT---WTALIVGYAR 593
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
++A+++ D LQ D N ++ Y G + +AR +F+ + RS +W +I+GY
Sbjct: 132 DDARELFDKMLQR----DEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGY 187
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP 412
G E LF++MR G +P++ T ++ C + I++ IH +K+ G
Sbjct: 188 CRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKN--GFES 245
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GLV + KC H+ EA+ + + W A+
Sbjct: 246 NVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAM 286
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 216/394 (54%), Gaps = 34/394 (8%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHD--YFLQSTIRGDLVLNN 316
++AI ++ + G+ +++ F ++ + C + +++H+ + L + D+ +
Sbjct: 260 RDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLT 319
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG++ A +FD +A + W+ +I A +G ++ L+LFE+MR GLQP
Sbjct: 320 ALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 379
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
TF +V AC A +++ HF S + GI P EH+ +V +LG+ G + +++
Sbjct: 380 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDL 439
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT-------- 488
+ +PFEP W A R + ++D A E + LDP K P + +
Sbjct: 440 LLH-MPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGR 498
Query: 489 --PPPKKRTAI-----------SILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKE 529
+ R A+ S ++ K R+ EF + P + +L+ L + MK
Sbjct: 499 WSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKA 558
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVPDT VLHD+ QE KE + YHSE+LA+A+ L++TP +P+R++KNLRVC DCH A
Sbjct: 559 AGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTA 618
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K +S++V RE++VRD RFH F++G CSCGDYW
Sbjct: 619 SKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 36/263 (13%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + + + L + I + ++ ++ +YGK G TDA VF M+ R + +W
Sbjct: 86 CTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAW 145
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
M+ YA NG E L LF QM G+ PN+ T ++ AC S + + + +++
Sbjct: 146 SAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEA 205
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL----------RNY 456
+ GI G LV + GKCG + A + Q + E W A+ R+
Sbjct: 206 Q-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIV--EKNVVAWSAISAAYARNDRNRDA 262
Query: 457 ARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYR 516
R+ +DLE A P T +S+LD + + + R
Sbjct: 263 IRVLHRMDLEGLA---------------------PNSTTFVSVLDACAAIAALKQGR--R 299
Query: 517 DDEKLKALNQMKESTYVPDTRYV 539
E++ L ES T V
Sbjct: 300 IHERIHVLGGGLESDVYVLTALV 322
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 251 ADLARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + G +EA+ L MD GV + + + C + + +H
Sbjct: 147 AMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQ 206
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I+ +V+ ++ +YGKCG + A F + ++++ +W + YA N + +++
Sbjct: 207 GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVL 266
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+M GL PN TF++V AC + A+++ IH G+ LV +
Sbjct: 267 HRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYS 326
Query: 426 KCGHLFEAQQFIEQ 439
KCG+L A ++
Sbjct: 327 KCGNLALAGNMFDK 340
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 28/208 (13%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I++Y KC DA VF + +++ SW +M+ +A+N D F M G
Sbjct: 12 LCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQG 71
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ P E SAC A I I + + GI + LV + GK GH +
Sbjct: 72 INPGEVGISIFLSACTDAREITIGRSIQLAILGT--GIEEESIVQTALVSLYGKLGHCTD 129
Query: 433 AQQFIEQKLPFEPTAEFWEAL-RNYARIHGDIDLEDHAEELM-----VDLDPSKADPKKI 486
A + + A W A+ YAR H E + +DLD
Sbjct: 130 AASVFLRMSHRDVVA--WSAMVAAYAR-------NGHPREALGLFRQMDLDG-------- 172
Query: 487 PTPPPKKRTAISILDGKSRLVEFRNPTL 514
P K T +S LD + L + R+ L
Sbjct: 173 --VAPNKVTLVSGLDACASLGDLRSGAL 198
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 215/414 (51%), Gaps = 37/414 (8%)
Query: 246 LPPSVADLARL----CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAK 297
L P+V L C G+ +++ E+ GV+ L C + K
Sbjct: 439 LTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGK 498
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + L+ D+V+ +I+MY K GS+T A+R+F + ++++ + M+ G A +G
Sbjct: 499 ELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHG 558
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
E + LF + + GL+P+ TF A+ +AC S I E + +F++M++++G+ P E+Y
Sbjct: 559 QSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENY 618
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +L + G+L EA IE+ P +P A W AL IHG++DL + A + L+
Sbjct: 619 ACMVDLLARSGYLDEAMALIERS-PVDPGASLWGALLTGCSIHGNLDLAEVAARNLFRLE 677
Query: 478 P-------------------SKADPKKIPTPPPKKRTA-----ISILDGKSRLVEFRNP- 512
P +AD K T I I G +P
Sbjct: 678 PYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVFEVDGSPH 737
Query: 513 --TLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STP 569
T +E + + Q+K + YVPDT V++++ +E KE+ LL H+E+LAI YGLI S
Sbjct: 738 PETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLAITYGLIHSDA 797
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+R P+R+IKN R+C DCH K +S + GR++I+RD RFHHF DG CSC DYW
Sbjct: 798 SRMPVRVIKNTRMCSDCHEVAKHISALCGRQIILRDAVRFHHFVDGNCSCNDYW 851
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L+ + G+ +EA+ ++++G+ DA+ +L + N + +VH +FL+
Sbjct: 277 AVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRH 336
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D +++MY KCG + ARRVFD + R++ +W+ ++ G+A G + L+L
Sbjct: 337 GLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELV 396
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
E+M++ L PN T+ + + +A + +K+ G++P + L+ G
Sbjct: 397 ERMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAA-GLTPNVVSWTSLIS--GS 453
Query: 427 C 427
C
Sbjct: 454 C 454
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 44/228 (19%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS-- 306
+A L + G+ EAI E+ +GV AD + CG K VH + L++
Sbjct: 141 VAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGL 200
Query: 307 -----TIRGDL--------------------------VLNNKVIEMYGKCGSMTDARRVF 335
+ G L V + V+ + G + DA +
Sbjct: 201 VDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELA 260
Query: 336 DHMA----DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
MA + ++ +W+ +++G A +G E L + +M + GL P+ T ++ + +A
Sbjct: 261 GRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANA 320
Query: 392 DAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ +H ++ G+ P LV + KCG L A++ +
Sbjct: 321 GMVRHGMEVHCFFLR--HGLVPDAYTGTALVDMYAKCGRLDCARRVFD 366
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 201/387 (51%), Gaps = 31/387 (8%)
Query: 266 IELMDKGVK-ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
+E+ KG+ D ++ N K++H + L ++N +++MY K
Sbjct: 226 MEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAK 285
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
C + A+++F M R + SW +I G A +GL +E L L+ +M GL+PNE TF+ +
Sbjct: 286 CSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGL 345
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC + + F SM ++GI+P +HY L+ +L + GHL EA+ I + +PF+
Sbjct: 346 IYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLI-KAMPFK 404
Query: 445 PTAEFWEALRNYARIHGD----IDLEDHAEELMVDLDPSK--------ADPKKIPTPPPK 492
P W AL + H + I + DH L + DPS A +
Sbjct: 405 PDEATWAALLSACNHHRNTLIGIRVADHLLSLKPE-DPSTYILLSNIYASAAMWESVSKV 463
Query: 493 KRTAIS-----------ILDGKSRLVEFRNPTLYRDDEKLKAL-----NQMKESTYVPDT 536
+R + I+ GK V T + E++ L +MK+ Y+PDT
Sbjct: 464 RRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDT 523
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VLHD++Q+ KE+ L +HSERLA+AYGL+ L I+KNLRVCGDCH +K +S I
Sbjct: 524 SSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISII 583
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
V RE++VRD R+HHFKDGKCSC ++W
Sbjct: 584 VKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G++ D F L + C + K+VH F+ S + D V+ + +++MY KCG
Sbjct: 100 GLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIG 159
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VFD ++ ++ SW MI+GYA +G + +QLF++M N ++ A+ S +
Sbjct: 160 RVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP----VKNLLSWTALISGLVQS 215
Query: 392 DAIEEAFIHFESMKSE 407
++F F M+S+
Sbjct: 216 GNWVDSFYLFMEMRSK 231
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
KK+H + +++ I L+N +I MYGKCG + DA +F+ + R SW ++
Sbjct: 22 GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81
Query: 356 NGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
L L +F M K GLQP+ F + AC A+++ + + + F +SP +
Sbjct: 82 ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQG----KQVHATFIVSPVS 137
Query: 415 EHYL---GLVGVLGKCG 428
+ + LV + KCG
Sbjct: 138 DDDVVKSSLVDMYAKCG 154
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 189/356 (53%), Gaps = 29/356 (8%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + + + N +++MY CGS+ +A +VF +S+ W MIN Y
Sbjct: 433 GKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGM 492
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G ++LF M L P+ TFLA+ AC + I E E+MK ++ + P E
Sbjct: 493 HGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPE 552
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY LV +LG+ HL EA F+ + + EPTAE W A RIH + L + A + ++D
Sbjct: 553 HYACLVDLLGRANHLEEAYHFV-KSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLD 611
Query: 476 LDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF----- 509
LDP ++ KK S ++ +++ F
Sbjct: 612 LDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDK 671
Query: 510 RNPTLYRDDEKLKALNQM--KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+P Y+ +KL + + KE YVP T+ VLH++ +E K Q L HSERLAIAYGL+S
Sbjct: 672 SHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMS 731
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T TP+RI KNLRVC DCH K++S+ RELIVRD RFHHF+DG CSCGD+W
Sbjct: 732 TSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 264 EAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA++L+ KG+ D + C + +AK+VH Y L+ + DL++ N +I
Sbjct: 297 EALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMII 355
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
++Y CG++ A R+F+ + + + SW MI+ Y NGL +E L +F M++ ++P+
Sbjct: 356 DVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSI 415
Query: 380 TFLAV 384
T +++
Sbjct: 416 TLVSI 420
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV D+ F + + CG + ++H ++ + + N ++ MY KC + A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 332 RRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
R++FD M +R+ + SW+ +I+ Y+ NG E L LF +M+K G+ N T +A AC
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC 122
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ EA+ E+ GV A+ + C + + + ++H L+S D+ +
Sbjct: 91 GQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVA 150
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ M+ + G M+ A R+FD + ++ +W+ MI G+ NGL +E LQ F ++ L+
Sbjct: 151 NALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLK 210
Query: 376 PNEQTFLAVFSACG 389
P+E + +++ +A G
Sbjct: 211 PDEVSLISILAASG 224
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G EA++ L D +K D ++ G + N K++H Y +++ +
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+L + N +I+MY KC + A VFD M ++ + SW +I YA N E L+L +
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRK 304
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
++ G+ + + AC + A +H ++K G+S + ++ V C
Sbjct: 305 VQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKR--GLSDLMMQNM-IIDVYADC 361
Query: 428 GHLFEAQQFIE 438
G++ A + E
Sbjct: 362 GNINYATRMFE 372
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 205/398 (51%), Gaps = 41/398 (10%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+EL + G + DA ++ CG+ KK+H Y + + +L+L N +I
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG + AR VF++M R + SW MI+ Y +G G + + LF +++ GL P+
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+ +AC A +EE F+ M + I+P EH +V +LG+ G + EA +FI Q
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI-Q 470
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------------ 481
+ EP W AL R+H D D+ A + + L P ++
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Query: 482 --------DPKKIPTPPPKKRTAISILDGKSRLVEFRNP---TLYRDDEKLKALNQMKES 530
K + P ++ + + + +P +YR+ + L + +MKE
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL--VKKMKEL 588
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP-----ARTPLRIIKNLRVCGD 585
YVPD+ LHD+++E KE L HSE+LAI + L++T + +RI KNLR+CGD
Sbjct: 589 GYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGD 648
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH A K++S+I RE+I+RD RFH F+ G CSCGDYW
Sbjct: 649 CHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ VH + +R + L K++ Y + AR+VFD + +R++ ++MI Y +N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
G EG+++F M ++P+ TF V AC + I IH + K G+S
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK--VGLSSTLF 176
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
GLV + GKCG L EA+ +++
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDE 200
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ D F + + C +K+H + + L + N ++ MYGKCG +++AR
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
V D M+ R + SW+ ++ GYA N D+ L++ +M + + + T ++ A
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 197/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + ++ +++H Y +++ D + N +++MY KCG++ A +FD +A + + SW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+MI GY +G G E + LF QMR+ G++ +E +F+++ AC + ++E + F M+
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
E I P EHY +V +L + G L +A +FIE +P P A W AL RIH D+ L
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN-MPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 467 DHAEELMVDLDPS---------------------KADPKKIPTPPPKKRTAISILDGKSR 505
+ E + +L+P K K+I +K S ++ K R
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 506 LVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F NP + L+ + +M E Y P T+Y L D ++ KE+AL HSE+L
Sbjct: 748 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 807
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A G+IS+ +R+ KNLRVCGDCH K MS++ RE+++RD+ RFH FKDG CSC
Sbjct: 808 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
Query: 620 GDYW 623
+W
Sbjct: 868 RGFW 871
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ G++ D + ++F C + + + VH +++ + N +++MY KC
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A+ VF M+DRS+ S+ MI GYA GL E ++LFE+M + G+ P+ T AV
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+ C ++E +H +++ G + L+ + KCG + EA+
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAE 452
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 8/202 (3%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKK 298
D+ + + +A +EG EA++L ++ G+ D + C + + K+
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH++ ++ + D+ ++N +++MY KCGSM +A VF M + + SW+ +I GY+ N
Sbjct: 419 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478
Query: 359 GDEGLQLFE-QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEH 416
+E L LF + + P+E+T V AC S A ++ IH M++ + +
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538
Query: 417 YLGLVGVLGKCGHLFEAQQFIE 438
LV + KCG L A +
Sbjct: 539 --SLVDMYAKCGALLLAHMLFD 558
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M GV+ D+ F + + + + +++H + L+S + N ++ Y K
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 244
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ AR+VFD M +R + SW+ +INGY NGL ++GL +F QM G++ + T ++VF+
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
C + I +H +K+ F S L+ + KCG L ++ + + +++
Sbjct: 305 GCADSRLISLGRAVHSIGVKACF--SREDRFCNTLLDMYSKCGDL-DSAKAVFREMSDRS 361
Query: 446 TAEFWEALRNYAR 458
+ + YAR
Sbjct: 362 VVSYTSMIAGYAR 374
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADAS--CFYTLFE 285
L V + ++ D+ + + L R C+ G ++ A++L+ K D ++ +
Sbjct: 43 SLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQ 102
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS 345
LC + K ++ K+V ++ + D L +K+ MY CG + +A RVFD +
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALF 162
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV---FSACGSADAIEEAFIHFE 402
W++++N A +G + LF++M G++ + TF V FS+ S E+ +H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ--LHGF 220
Query: 403 SMKSEFG 409
+KS FG
Sbjct: 221 ILKSGFG 227
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 203/392 (51%), Gaps = 32/392 (8%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEAI+L + VK D + C E + V ++ + VL +
Sbjct: 296 KEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTAL 355
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I++Y KCGSM+ A VF M ++ W+ +I+G A NG LF Q+ KLG++P+
Sbjct: 356 IDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDG 415
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + C A ++E +F SM F ++P EHY +V +LG+ G L EA Q I
Sbjct: 416 NTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLI- 474
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------------- 481
+ +P E A W AL RIH D L + A + +++L+P +
Sbjct: 475 RNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWD 534
Query: 482 ---------DPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQ-MKEST 531
+ K+I PP + + + + + +P + KL L + MK +
Sbjct: 535 EAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAG 594
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVP T +VL DI++E KE L HSE+LAIA+GLIS +R++KNLRVCGDCH AIK
Sbjct: 595 YVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIK 654
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S I GRE+ VRDN RFH F++G CSC DYW
Sbjct: 655 LISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK +EAI+ L++ + D+ + C + + +H ++ + ++ +
Sbjct: 192 GKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVG 251
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG+M AR VFD M ++ + SW MI GYA NGL E + LF QM++ ++
Sbjct: 252 TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVK 311
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVGVLGKCGHLFE 432
P+ T + V SAC A+E ++ ++EF +P GT L+ + KCG +
Sbjct: 312 PDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT----ALIDLYAKCGSMSR 367
Query: 433 AQQ 435
A +
Sbjct: 368 AWE 370
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
K+H ++ D+ + ++ +Y KCG + DA +VFD + D+++ SW +I+GY G
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEH 416
E + +F ++ ++ L P+ T + V SAC D +IH M E G+
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM--EMGMVRNVFV 250
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA 457
LV + KCG++ +A+ + +P + + ++ YA
Sbjct: 251 GTSLVDMYAKCGNMEKARSVFD-GMPEKDIVSWGAMIQGYA 290
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 309 RGDLVLNNKVIEMYGKCG-SMTDA---RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
R L +N ++ M +C +D R +F + ++ W+ MI G N D+ ++
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGV 423
+ MR G PN TF V AC ++ IH +K F + LV +
Sbjct: 99 FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKT--SLVCL 156
Query: 424 LGKCGHLFEAQQFIE 438
KCG+L +A + +
Sbjct: 157 YAKCGYLEDAHKVFD 171
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 208/386 (53%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+K + ++ C E + VHDY + + + ++ +I+MY KCG
Sbjct: 224 EMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCG 283
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M + +W +MI YA++G G E + LFE+M+K G++P++ TFL V
Sbjct: 284 SLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLY 343
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + E +F+ MK + GI PG +HY + +L + G L A +FI++ LP PT
Sbjct: 344 ACSHSGLVSEGLQYFDDMK-DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDE-LPINPT 401
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
W L + HGD +L E ++ LD S K
Sbjct: 402 PILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKL 461
Query: 486 IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL--KALNQMKESTYVPDTRY 538
+ K S ++ + + EF R+P ++ K+ + ++Q+K YVP+T +
Sbjct: 462 MSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPK-SQEARKMVDEVIDQLKLVGYVPNTSH 520
Query: 539 VLH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
V H ++ +E K +L YHSE+LAIA+GL++T LR++KNLRVC DCH+ K++S +
Sbjct: 521 VFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVF 580
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD RFHHF++G CSCGDYW
Sbjct: 581 NRRIILRDLNRFHHFEEGICSCGDYW 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V+ + ++++GV D F +L + C + E ++ H ++ + +I M
Sbjct: 118 VRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINM 177
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y +CG AR +F + S++ MI + E L LF +M+ GL+P T
Sbjct: 178 YAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTV 237
Query: 382 LAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++V SAC A+E ++H + G+ + L+ + KCG L +A
Sbjct: 238 ISVLSACALLGALELGRWVH--DYVRKIGLGSLVKVSTALIDMYAKCGSLEDA 288
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 210/397 (52%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q + KEA+ L M KG V + ++ C YE K VH Y + ++ +
Sbjct: 300 QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVT 359
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++I+ Y KCG + + VF M+ +++ +W +I G A+NG G L+ F M +
Sbjct: 360 LGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLEND 419
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN+ TF+ V SAC A +++ F SM+ +F I P EHY +V +LG+ G L EA
Sbjct: 420 VKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEA 479
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
QFI+ +PF P A W L R H +I++ + + E + L+P+ +
Sbjct: 480 YQFIDN-MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYAL 538
Query: 482 -----DPKK----IPTPPPKKRTAISILDGKSRLVEFRNP------TLYRDDEKLKALNQ 526
D + I KK S+++ + EF + + D K + Q
Sbjct: 539 VGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQ 598
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K YVP+T + ++E+KE ++ +HSE+LAIAYGLI T RT +RI KNLR+C DC
Sbjct: 599 IKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDC 658
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HNA K +S++ R +IVRD RFHHFKDG CSC DYW
Sbjct: 659 HNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+K V+ D F ++ + C K ++VH L+S + + + N +I+MY CG +
Sbjct: 114 EKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIG 173
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
AR VFD M +RS+ +W+ M++GY NGL DE ++LF ++ +L ++ ++ T ++V ACG
Sbjct: 174 VARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACG 233
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+E + E + S+ G+ L+ + KCG + A++ ++ + A
Sbjct: 234 RLANLEIGELIGEYIVSK-GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVA-- 290
Query: 450 WEAL 453
W A+
Sbjct: 291 WSAM 294
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
VK ++++ ++ D ++ CG E + + +Y + +R + L +I+M
Sbjct: 207 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 266
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG + AR++FD M R + +W MI+GYA E L LF +M+K + PNE T
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326
Query: 382 LAVFSACGSADAIEEA-FIHF--ESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++V +C A E ++HF + K + ++ GT+ L+ KCG++
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ----LIDFYAKCGYI 374
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC--GSMTDARRVFDHMADRSMD 344
C PK + ++VH + L++ D ++ V+E ++ A +F+H+
Sbjct: 31 CKTPK---DLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESS 87
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFES 403
++++MI G A D L LF++M + +Q ++ TF +V AC A+ E +H
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI 147
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+KS F + E+ L+ + CG + A+ +
Sbjct: 148 LKSGFKSNEFVEN--TLIQMYANCGQIGVARHVFD 180
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 208/384 (54%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ +GV +++ L C + + K++H +++ D+ + +I+MY K
Sbjct: 531 QMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSS 590
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ +A +VF + ++++ SW+ MI G+A GLG E + +F +M+K+G+ P+ TF A+ S
Sbjct: 591 SLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLS 650
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC ++ I E + +F+SM +++ I P EHY +V +LG+ G+L EA I +P +P
Sbjct: 651 ACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI-HTMPLKPD 709
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKK 485
A W AL RIH ++ + A + + L+P+ + +
Sbjct: 710 ATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLREL 769
Query: 486 IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD------EKLKALNQMKESTYVPDTRYV 539
+ + R S + R+ F + D E + +++MK+ YVPD V
Sbjct: 770 MGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCV 829
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
++D+ K++ LL H+E+LAI YGLI A P+R+IKN R+C DCH+A K +S + R
Sbjct: 830 YQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKAR 889
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
EL +RD RFHHF++GKCSC D+W
Sbjct: 890 ELFLRDGVRFHHFREGKCSCNDFW 913
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q K+++ +EL K +KA+ + + + CG AK++H Y + + D+
Sbjct: 211 QSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVS 270
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I MY K G + ARRVFD M +R+ SW+ MI+ YA G ++ LF ++
Sbjct: 271 LCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD 330
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++P+ T+ + S EE + M+ E G P + ++ + + G L
Sbjct: 331 MKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFL 386
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G K ++S ++ + + K+ H Y L++ D+ + +I+MY K S+T
Sbjct: 364 EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTS 423
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A+ VFD+M +R++ +W+ +++GY+ G+ ++ L+L QM K G++P+ T+ + S
Sbjct: 424 AQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAM 483
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+EA KS G++P + L+ + G+ ++ +F Q
Sbjct: 484 WGCGKEALAVLHQTKS-LGLTPNVVSWTALISGSSQAGNNRDSLKFFAQ 531
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL KGV D+ + + C ++H ++ D+ L ++ YG+C
Sbjct: 123 ELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW 182
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +VF M + W+ I + +G++LF +M+ L+ T + V
Sbjct: 183 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 242
Query: 387 ACGSADAIEEA 397
ACG A+ A
Sbjct: 243 ACGKMGALNAA 253
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD----SWHL 348
+E+A ++ + + I+ DLV N +I Y G +A V + SW
Sbjct: 452 FEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTA 511
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSE 407
+I+G + G + L+ F QM++ G+ PN + + AC S +++ IH S+++
Sbjct: 512 LISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 571
Query: 408 F 408
F
Sbjct: 572 F 572
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 206/379 (54%), Gaps = 27/379 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ ++F C ++ H Y L+ + + + VI+MY K GS+ ++
Sbjct: 590 GVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMES 649
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+VF+ + +RS+ SW+ M+ GY +G E ++LFE+M++ G P+E TFL V +AC +
Sbjct: 650 FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHS 709
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ E + + MK+ FG++P +HY ++ +L + G L EA + +++ EP W
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769
Query: 452 ALRNYARIHGDIDL-EDHAEELMVD--------------------LDPSKADPKKIPTPP 490
L + RIH ++++ E A +L V D + +++
Sbjct: 770 FLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMS 829
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDD-EKLKAL-----NQMKESTYVPDTRYVLHDID 544
+K S ++ ++ F D E++K+L ++ + Y PDT V HD+
Sbjct: 830 LRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLS 889
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+E K + L HSE+LAI YGLI T T LR+ KNLR+C DCHNA K++S+++ RE++VR
Sbjct: 890 EEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVR 949
Query: 605 DNKRFHHFKDGKCSCGDYW 623
DNKRFHHFK+G CSCGDYW
Sbjct: 950 DNKRFHHFKNGFCSCGDYW 968
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ G+ D +L C K + K+VH +++ + D + ++ +Y CG
Sbjct: 484 QMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCG 543
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +FD M D+++ SW+ M+NGY NG + L LF QM G+QP E + ++VF
Sbjct: 544 ELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFG 603
Query: 387 AC 388
AC
Sbjct: 604 AC 605
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+ + G+ D F + + C + VH +++ + D+ ++N ++ YG GS
Sbjct: 175 ITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGS 234
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR----KLGLQPNEQTFLA 383
++DA RVF M +R++ SW+ MI ++DNGL +E L QM ++ P+ T
Sbjct: 235 VSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLAT 294
Query: 384 VFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQK 440
V C I +H +MK +S E + L+ + KCG + +AQ K
Sbjct: 295 VLPVCARDREIGVGKGVHGLAMK----LSLDKEVVVNNALMDMYSKCGCINDAQVIF--K 348
Query: 441 LPFEPTAEFWEALRNYARIHGDI-DLEDHAEELMVDLDPSKADPKKIPTPPP 491
L W + GDI D +++ +AD I P
Sbjct: 349 LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVP 400
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + T+ +C + K VH ++ ++ ++V+NN +++MY KCG + DA+ +F
Sbjct: 288 DVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIF 347
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSACGSADA 393
++++ SW+ M+ G++ G + L QM G L+ +E T L C
Sbjct: 348 KLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC----- 402
Query: 394 IEEAF------IHFESMKSEF 408
EE+ +H S+K EF
Sbjct: 403 FEESVLPNLKELHCYSLKQEF 423
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 256 LCQEGK----VKEAIELMDKGVKADASCFYTLF-------ELCGNPKWYENAKKVHDYFL 304
LC+ G V + IE D+ K+ + F L + G K + +K+H
Sbjct: 49 LCETGNPPQGVLQVIEEFDREEKSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVS 108
Query: 305 QST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+S + D VL +VI MY CGS D+R VFD + +++ W+ +I+ Y+ N L L
Sbjct: 109 ESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVL 168
Query: 364 QLFEQM-RKLGLQPNEQTFLAVFSACGSADAIE 395
++F +M + GL P+ TF V AC ++
Sbjct: 169 EMFVKMITESGLLPDNFTFPCVVKACAGVSEVQ 201
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFL-QSTIRGDLVLNNKVIEMYGKCGSMTDA 331
++AD +C N K++H Y L Q + + ++ N + Y KCGS++ A
Sbjct: 388 LRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYA 447
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
RVF + ++++SW+ +I GY+ + L + QM+ GL P+ T ++ SAC
Sbjct: 448 HRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQI 507
Query: 392 DAIE 395
+++
Sbjct: 508 KSLK 511
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 213/409 (52%), Gaps = 43/409 (10%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G KEA+ E++ G + + C N + + +H Y +S I
Sbjct: 221 IAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEI 280
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVF--DHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + L +++MY KCG + A +VF ++ + W+ MI GYA +G E + LF
Sbjct: 281 KMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLF 340
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
EQM+ + PN+ TF+A+ +AC +EE +F+SM S +GI P EHY +V +LG+
Sbjct: 341 EQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGR 400
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA++ + +P P A W AL RIH DI+ +++ +LD
Sbjct: 401 SGLLKEAEETVFN-MPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVL 459
Query: 479 -------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF----------RNPTLY 515
+KA +KI KK S ++ +F + L+
Sbjct: 460 LANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLF 519
Query: 516 RDDEKLKALNQMKESTYVPDTRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPL 574
D+ K +K + YVP+ VL DID +E KE AL HSE+LAIA+GLI+TP T +
Sbjct: 520 LDEMTTK----LKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAI 575
Query: 575 RIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RI+KNLRVC DCH A K +S++ RE+IVRD R+HHFKDG CSC DYW
Sbjct: 576 RIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 57/268 (21%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD--- 336
F +F+ CGN +++ + ++ + +L + N +I MY G + +ARRVFD
Sbjct: 120 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSL 179
Query: 337 ----------------------------HMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
M++R + SW +I GY G E L LF +
Sbjct: 180 DQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHE 239
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG-LVGVLGK 426
M + G PNE T + +AC + A+++ +IH KSE ++ E L L+ + K
Sbjct: 240 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN---ERLLASLLDMYAK 296
Query: 427 CGHL-FEAQQFIEQ---KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD 482
CG + F A+ F ++ KL P W A+ +HG A +L + K
Sbjct: 297 CGEIDFAAKVFHDEYGLKLKVWP----WNAMIGGYAMHGK---SKEAIDLFEQMKVEKVS 349
Query: 483 PKKIPTPPPKKRTAISILDGKS--RLVE 508
P K+ T +++L+ S +LVE
Sbjct: 350 PNKV--------TFVALLNACSHGKLVE 369
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 199/358 (55%), Gaps = 38/358 (10%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
K H +++ + D+ ++ +++MYGKCG + DA +F + +S SW+ +I+ + +G
Sbjct: 465 KAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHG 524
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G + ++LF++M+ G++P+ TF+++ SAC + ++E F+ M+ +GI P +HY
Sbjct: 525 YGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHY 584
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL----EDHAEELM 473
+V + G+ GHL +A F+ + +P P W AL RIH +++L DH ++
Sbjct: 585 GCMVDLFGRAGHLEKAFNFV-KNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVE 643
Query: 474 ----------------------VDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRN 511
VD S A + + P + D K + N
Sbjct: 644 SENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEV---DKKIDVFYTGN 700
Query: 512 PT------LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
T +Y + L A +MK YVPD +VL D++ + KE L HSERLA+A+G+
Sbjct: 701 QTHPKCEEIYSELRNLTA--KMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGI 758
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
ISTP +T L+I KNLRVCGDCHNA K +S+I RE+IVRD+ RFHHFKDG CSCGDYW
Sbjct: 759 ISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTD 330
GV D +L + + +++ +H + + D+ L N +I+MY K G +
Sbjct: 336 GVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDS 395
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACG 389
AR+VF+ + + + SW+ +I GY+ NGL +E + ++ MR G PN+ T++++ +A
Sbjct: 396 ARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHS 455
Query: 390 SADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
A+++ H + +K+ F I T LV + GKCG L +A + +P + +
Sbjct: 456 QLGALKQGMKAHGQLIKNFLYFDIFVST----CLVDMYGKCGKLADALSLFYE-VPHQSS 510
Query: 447 AEFWEALRNYARIHG 461
W A+ + +HG
Sbjct: 511 VS-WNAIISCHGLHG 524
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 260 GKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GKV EA+E+ D K V D+ +L +C + +H Y ++ + DL +
Sbjct: 219 GKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVC 278
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I MY K G + A +F+ M R + SW+ ++ + N L ++ +M +G+
Sbjct: 279 NALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVV 338
Query: 376 PNEQTFLAVFSA 387
P+ T +++ S
Sbjct: 339 PDLLTLVSLASV 350
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CGN ++ +KVH L+ D+ + I Y + G ++ A +FD+M R + +W
Sbjct: 152 CGN---LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTW 208
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMK 405
+ MI+G+ NG E L++F++MR + + T ++ C D I IH ++K
Sbjct: 209 NAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIK 268
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
G+ L+ + K G L A+ Q
Sbjct: 269 --LGLEFDLFVCNALINMYAKFGELRSAETIFNQ 300
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
AK++H + S + L+ K+I Y G + AR FD + + + +W+ MI+ YA
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 356 NGLGDEGLQLF-EQMRKLGLQPNEQTFLAVFSACGSAD------------------AIEE 396
G + F E + LQ + TF V ACG+ D I
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAA 178
Query: 397 AFIHFES 403
+FIHF S
Sbjct: 179 SFIHFYS 185
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 223/416 (53%), Gaps = 35/416 (8%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYE 294
P+ D+V ++ LA Q G+ A+EL+ D A F TL + CGN
Sbjct: 194 PSRDEVSWTTM--LAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSAIA 251
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ +HD + S + D+VL+ ++ MY KCG + +AR +FD + + ++ M+ YA
Sbjct: 252 QGRHLHDRIITSGVCIDVVLHTALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYA 311
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
NG + L+LF M + G +P+ TF V AC +++A+ +F +++ + GI
Sbjct: 312 RNGHFGDALKLFWSMEQDGYKPDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVA 371
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
EH+ V +L + G L +A++F+ ++P P + W +L RIH ++++ A E +
Sbjct: 372 EHFGCAVDLLARAGWLADAEKFL-NRMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVF 430
Query: 475 DLDPSKADPKKIPT------------------------PPPKKRTAISILDGKSRLV--E 508
L P +A P + + P R+ I I S + +
Sbjct: 431 RLAPHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGD 490
Query: 509 FRNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+P L + ++++ +++ MKE YVPDT+ VLHD ++E KE L +HSE+LAI GLI
Sbjct: 491 SWHPDLVQICQEIQRVSKVMKEHGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIK 550
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP +T + I+KN+RVC DCH A K++S++ R++++RD FHH +DGKCSC DYW
Sbjct: 551 TPPKTTISIVKNIRVCPDCHTAAKVISKVTERKIVIRDINLFHHMEDGKCSCRDYW 606
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G DA +F + E + + + + D V+ N ++ MY +CG M D
Sbjct: 126 RGCHPDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHDPVVANSLLNMYRRCGGMDD 185
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ-PNEQTFLAVFSACG 389
R F M R SW M+ G G L+L M + G + + TF + ACG
Sbjct: 186 FERAFWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACG 245
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP-TAE 448
+ AI + H G+ + L+ + KCG + EA++ +Q L EP
Sbjct: 246 NLSAIAQGR-HLHDRIITSGVCIDVVLHTALLNMYAKCGRVDEARELFDQTL--EPNNIT 302
Query: 449 FWEALRNYAR 458
F + YAR
Sbjct: 303 FSSMVVAYAR 312
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G V+EA+EL L C + A ++H L + L+NK++
Sbjct: 28 GLVREAVEL--------------LLHRCAAERALPQAHQLHALMLATGALRSRYLSNKLV 73
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+ YG+CG + A VF D ++ SW ++I+ N L L + M+ G P+
Sbjct: 74 QAYGQCGDVESAHAVFACQPDPNVFSWMMLISACLRNALPRAALGHYRAMQLRGCHPDAH 133
Query: 380 TFLAVFSACGSAD 392
A+F C AD
Sbjct: 134 VVSAIF--CAVAD 144
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 229/454 (50%), Gaps = 41/454 (9%)
Query: 206 NQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEA 265
G ++ ++ + G+ ++N N D + A ++ Q G+ EA
Sbjct: 274 TMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI--SWTAMISGYSQAGQCSEA 331
Query: 266 IELMDK----GVKADASCFYTLFELCGNPKWYENAKKV-HDYFLQSTIRGDLVLNNKVIE 320
+EL + G+K D + C ++ K++ H Y + +L V++
Sbjct: 332 LELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 391
Query: 321 MYGKCGSMTDARRVFDHMAD--RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
MY KCGS+ A +F + ++ ++ MI G A +GLG+ + +F ++ GL+P+E
Sbjct: 392 MYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDE 451
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V ACG + IEE FESM + +GI P EHY +V +LG+ G L EA +
Sbjct: 452 VTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLV- 510
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPKK-- 485
QK+PFE + W AL + R HG++ + + A + +++++ AD +
Sbjct: 511 QKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWE 570
Query: 486 -------------IPTPPPKKRTAISILDGKSRLV--EFRNPTLYRDDEKLKALN-QMKE 529
I PP + I + R V + +P + LK + ++K
Sbjct: 571 EARQVRKVMEDHGIRKPPG--WSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKS 628
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YVP+T V+ DID+E KE + YHSE+LA+A+GL+ +RI+KNLR+C DCH A
Sbjct: 629 AGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKA 688
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I GRE+ VRD RFHHF++G CSC D+W
Sbjct: 689 FKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 34/163 (20%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS--TIRGDLVLNNKVIEMYGK 324
E+ + G+ D F LF +C K++H ++ +I +++L + +++MY K
Sbjct: 202 EMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAK 261
Query: 325 CGSMTDARRVFDHMA-DRSMDSWHLM-------------------------------ING 352
CG + A RVF M +S +W M I+G
Sbjct: 262 CGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISG 321
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
Y+ G E L+LF++M LG++P+E T +AV SAC A +
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFD 364
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F L C E +VH + ++ DL + N +I +Y G++ AR +FD
Sbjct: 114 FPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESL 173
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
R + S++ MI GYA+ + L LF +M+ G+ P+E TF+A+FS C +
Sbjct: 174 VRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQ 233
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
IH + K+ I +V + KCG + A++ + A + + YAR
Sbjct: 234 IHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYAR 293
Query: 459 IHGDIDL 465
G+I++
Sbjct: 294 C-GEINV 299
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 215/381 (56%), Gaps = 31/381 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
+K + + T+ C + + K++ +Y L + + D + +I M+ KCGS+ A
Sbjct: 80 AIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKA 139
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGS 390
VF+ ++D+ + +W MINGYA +G+ +E L LF +M ++ ++P+ F ++ AC
Sbjct: 140 ISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSH 199
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+E+ F+SM+ +FGI P EHY+ LV +LG+ G FE + +P + A+ W
Sbjct: 200 VGLVEDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQ-FELALKTIRVMPVKLQAQVW 258
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSK----ADPKKIPTPPPK-KRTAIS---ILD- 501
+ H +++L + A ++ ++P + T K K A++ ++D
Sbjct: 259 APFLSACTKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSMGKWKEAAVTRSLMIDR 318
Query: 502 ------GKSRLVEF-----------RNPTLYRDD-EKLKALN-QMKESTYVPDTRYVLHD 542
G S+ VE R+ T D +KL+ +N ++ E+ YVP+T V+HD
Sbjct: 319 GLVKAPGWSQ-VEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHD 377
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+++E KE+AL HSERLAIA+GLIST A + LRI+KN R C DCH+A+K +S+I GR LI
Sbjct: 378 LEREEKEEALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLI 437
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
VRD RFHHF+ GKC+C D+W
Sbjct: 438 VRDGSRFHHFESGKCTCKDFW 458
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L+N ++ MY KCG + AR+VFD +++ W +I GY G E L LF+++ K
Sbjct: 21 LDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGYPAEALLLFKKLLKTA 80
Query: 374 LQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
++PN T + SAC GS D +E E G + L+ + KCG +
Sbjct: 81 IKPNGATLATILSACADLGSLDMGKE----IEEYILSNGFQSDRQVQTSLIHMFSKCGSI 136
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+A E+ + A W ++ N IHG
Sbjct: 137 GKAISVFERISDKDLAA--WSSMINGYAIHG 165
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 209/395 (52%), Gaps = 32/395 (8%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K +E+ GV D F E +++H ++ + + +
Sbjct: 517 MEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASA 576
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++MYGKCG + D R+ +RS SW+++ + ++ +G ++ + F +M LG++P+
Sbjct: 577 TMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPD 636
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
TF+++ SAC +EE +++SM EFGI H + ++ +LG+ G EA+ FI
Sbjct: 637 HVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFI 696
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----------------- 480
++ +P PT W +L + HG+++L A E ++ LDPS
Sbjct: 697 KE-MPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKW 755
Query: 481 ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
D +KI KK+ A S + K++L F + +Y E+LK + +K
Sbjct: 756 EDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKM--IK 813
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
E+ Y+PD Y L D D+E KE L HSERLA+AYGLIS+P + L+I KNLRVCGDCH+
Sbjct: 814 EAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHS 873
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K S I+GR++++RD RFH F G+CSC DYW
Sbjct: 874 VYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 253 LARLCQEGKVKEAIEL------MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
+A Q+G +A++L M +G A+ F + C +P++ K +H +
Sbjct: 305 MACYAQDGNCLDALKLLATMFYMRRG--ANYVTFTSALAACSDPEFATEGKILHALVIHV 362
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ ++++ N ++ +Y K G M +A++VF M R +W+ +I G+AD+ DE L+ F
Sbjct: 363 GLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAF 422
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEE------AFIHFESMKSEFGISPGTEHYL-- 418
+ MR+ G+ N T V AC + + + E AFI +S + Y+
Sbjct: 423 KLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQS--------DEYVQN 474
Query: 419 GLVGVLGKCGHL 430
L+ + KCG L
Sbjct: 475 SLITMYAKCGDL 486
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYE-NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
E+ D GVK +L C +W +VH + ++ + D+ + ++ +YG
Sbjct: 19 EMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNY 78
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G DA +VF M +++ SW ++ Y D G + ++ +MR G+ N+ T +V
Sbjct: 79 GLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVI 138
Query: 386 SACGSAD 392
S C S +
Sbjct: 139 STCVSLE 145
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 276 DASCFYTLFELCG---NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+++ T+ CG N KW + +H L+ ++ +N +I MY G DA
Sbjct: 231 NSTTLSTMLAGCGSVDNLKW---GRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAE 287
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF M ++ M SW+ M+ YA +G + L+L M + N TF + +AC +
Sbjct: 288 LVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPE 347
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
E I ++ G+ LV + K G + EA++ + Q +P + W A
Sbjct: 348 FATEGKI-LHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKK-VFQTMP-KRDGVTWNA 404
Query: 453 LRNYARIHGDIDLEDHAEEL 472
L I G D E+ E L
Sbjct: 405 L-----IGGHADSEEPDEAL 419
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+V + ++ + ++ + N +I M+G GS+ +A VF M + SW+ MI Y NG
Sbjct: 152 QVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNG 211
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
L E L+ F M ++ + N T + + CGS D
Sbjct: 212 LCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVD 246
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E+ +H + + + + D + N +I MY KCG + + +FD + ++ +W+ M+
Sbjct: 452 EHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAAN 511
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
A +G +E L+ +MR+ G+ +E +F
Sbjct: 512 AHHGHMEEALKFLLEMRRAGVNVDEFSF 539
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 218/406 (53%), Gaps = 37/406 (9%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G+ EA+ L G++ D+ + C N + + + VH + ++
Sbjct: 280 AMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR- 338
Query: 307 TIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
R D +L I+MY KCGS+ A+ +F+ ++DR + W+ MI +G G + L
Sbjct: 339 --RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALT 396
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
LF++M + G++P+ TF ++ SA + +EE + F M + F I+P +HY+ LV +L
Sbjct: 397 LFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLL 456
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
+ G + EA + + EPT W AL + + ++L + + +++L P
Sbjct: 457 ARSGLVEEASDLLTS-MKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVL 515
Query: 485 KIPT---PPPKKRTAISIL------DGKSRL-----VEFRNP--TLYRDDE--------- 519
+ + KK + + G ++ +E R +D+
Sbjct: 516 ALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIV 575
Query: 520 -KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
K+ L+ +M++ Y+P T +V HD+++E KEQ L YHSERLAIA+GL++T T L II
Sbjct: 576 SKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVII 635
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH+AIK +S+I RE++VRD KRFHHFKDG CSC DYW
Sbjct: 636 KNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ GVK D + + C + VH + L+ +R D+V +++MY K G +
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLD 261
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
A RVF M R+ SW MI+G+A NG DE L+LF M+ G+QP+ ++ AC
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACS 321
Query: 390 SADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ ++ +H F + +F GT + + KCG L AQ + +
Sbjct: 322 NIGFLKLGRSVHGFIVRRFDFNCILGT----AAIDMYSKCGSLASAQMLFN--MISDRDL 375
Query: 448 EFWEALRNYARIHG 461
W A+ HG
Sbjct: 376 ILWNAMIACCGAHG 389
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D++ F C + V D + + D+ + + ++ +Y + G+M DA +VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
M R +W M+ G+ G + +Q++ +MR+ G++ +E + V AC +A
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 212/403 (52%), Gaps = 41/403 (10%)
Query: 257 CQE-GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C E G+ +EA+E+ K G K + ++ C + K++H Y + GD
Sbjct: 376 CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD 435
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L ++ MY KCG + +R VFD M + + +W+ MI A +G G E L LF++M
Sbjct: 436 LTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLL 495
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
+QPN TF V S C + +EE F SM + + P HY +V + + G L
Sbjct: 496 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLN 555
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------- 478
EA +FI Q +P EPTA W AL R++ +++L + + + +++P
Sbjct: 556 EAYKFI-QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNIL 614
Query: 479 ------SKADPKKIPTPPPKKRTAISILDGKSRL-VEFRNPTLYRDD------EKL---- 521
S+A +I K I+ G S L V + T D +K+
Sbjct: 615 VTAKMWSEASQVRILM----KERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFL 670
Query: 522 -KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
+ + +MK + Y PDT YVL DIDQE K ++L HSE+LA+A+G+++ ++ +R+ KNL
Sbjct: 671 DELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNL 730
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
R+CGDCHNAIK MS++VG ++VRD+ RFHHFK+G CSC D W
Sbjct: 731 RICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L G EAI+ L ++G+K D F + C K+VHD + +
Sbjct: 136 ISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGV 195
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + N +I YGKC + ARRVFD + R + SW + + Y G +G+ +F +
Sbjct: 196 MSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFRE 255
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M G++PN T ++ AC ++ IH +++ G+ LV + KC
Sbjct: 256 MGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRH--GMVVNLFVCSALVSLYAKC 313
Query: 428 GHLFEAQQFIE 438
+ EA+ +
Sbjct: 314 LSVREARMVFD 324
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVK + ++ C K ++ K++H + ++ + +L + + ++ +Y KC S+ +A
Sbjct: 260 GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREA 319
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VFD M R + SW+ ++ Y N ++G LF +M + G++ +E T+ AV C
Sbjct: 320 RMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMEN 379
Query: 392 DAIEEAFIHFESMKSEFGISP 412
EEA F M+ + G P
Sbjct: 380 GRSEEAVEMFRKMQ-KMGFKP 399
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++I + G AR++FD++ + +I+ +GL +E ++++ +++ G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 374 LQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
++P+ FLA AC S DA+ +H ++ + G+ L+ GKC
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRC--GVMSDVFVGNALIHAYGKC 212
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 197/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + ++ +++H Y +++ D + N +++MY KCG++ A +FD +A + + SW
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+MI GY +G G E + LF QMR+ G++ +E +F+++ AC + ++E + F M+
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
E I P EHY +V +L + G L +A +FIE +P P A W AL RIH D+ L
Sbjct: 478 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN-MPIPPDATIWGALLCGCRIHHDVKLA 536
Query: 467 DHAEELMVDLDPS---------------------KADPKKIPTPPPKKRTAISILDGKSR 505
+ E + +L+P K K+I +K S ++ K R
Sbjct: 537 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 596
Query: 506 LVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F NP + L+ + +M E Y P T+Y L D ++ KE+AL HSE+L
Sbjct: 597 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 656
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A G+IS+ +R+ KNLRVCGDCH K MS++ RE+++RD+ RFH FKDG CSC
Sbjct: 657 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 716
Query: 620 GDYW 623
+W
Sbjct: 717 RGFW 720
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ G++ D + ++F C + + + VH +++ + N +++MY KC
Sbjct: 134 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 193
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A+ VF M+DRS+ S+ MI GYA GL E ++LFE+M + G+ P+ T AV
Sbjct: 194 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 253
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+ C ++E +H +++ G + L+ + KCG + EA+
Sbjct: 254 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAE 301
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKK 298
D+ + + +A +EG EA++L ++ G+ D + C + + K+
Sbjct: 208 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 267
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH++ ++ + D+ ++N +++MY KCGSM +A VF M + + SW+ +I GY+ N
Sbjct: 268 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 327
Query: 359 GDEGLQLF----EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPG 413
+E L LF E+ R P+E+T V AC S A ++ IH M++ +
Sbjct: 328 ANEALSLFNLLLEEKR---FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 384
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIE 438
+ LV + KCG L A +
Sbjct: 385 VAN--SLVDMYAKCGALLLAHMLFD 407
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++M GV+ D+ F + + + + +++H + L+S + N ++ Y K
Sbjct: 34 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 93
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ AR+VFD M +R + SW+ +INGY NGL ++GL +F QM G++ + T ++VF+
Sbjct: 94 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 153
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
C + I +H +K+ F S L+ + KCG L ++ + + +++
Sbjct: 154 GCADSRLISLGRAVHSIGVKACF--SREDRFCNTLLDMYSKCGDL-DSAKAVFREMSDRS 210
Query: 446 TAEFWEALRNYAR 458
+ + YAR
Sbjct: 211 VVSYTSMIAGYAR 223
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 228/453 (50%), Gaps = 33/453 (7%)
Query: 203 NQQNQGYPQARN---SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVAD-LARL-C 257
N GY + + S+ + G Q++ ++ P D V ++ D RL C
Sbjct: 184 NAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNC 243
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
+ + E+ +K D ++ C E + + Y ++ ++ D + N
Sbjct: 244 YKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNA 303
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I+MY KCG++ A +F+ + R +W M+ G A NG G+E L +F QM K + P+
Sbjct: 304 LIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPD 363
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
E T++ V SAC ++E F SM + GI P HY +V +LGK GHL EA + I
Sbjct: 364 EVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEII 423
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------------- 481
+ +P +P + W AL RIH D ++ + A E +++L+P+
Sbjct: 424 -KNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKW 482
Query: 482 ----DPKKIPTPPPKKRT-AISILDGKSRLVEF-----RNPTLYRDDEKL-KALNQMKES 530
+ +++ K+T S+++ + EF +P KL K + +K +
Sbjct: 483 DKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIA 542
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y P+T V DI +E KE A+ HSE+LAIA+GLI++ +RI+KNLR+C DCH+
Sbjct: 543 GYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVA 602
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S++ RE+IVRD RFHHF+ G CSC DYW
Sbjct: 603 KLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 20/276 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG--KCGSMTDARRVFDHMA 339
+LFE C K + K++H +++ I + ++ NK++ + G M AR++FD +
Sbjct: 19 SLFETC---KSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIP 75
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+ S+ SW++M GY+ G+ L+ +M + ++P+ T+ +F + A++
Sbjct: 76 EPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRE 135
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYA 457
+H +K +G+ + L+ + CG + A+ + + W A+ Y
Sbjct: 136 LHCHVVK--YGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVT--WNAMISGYN 191
Query: 458 RIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTA-ISILDGKSRLVEFRNPTLYR 516
RI D+ V+ A K P + + +++DG RL ++
Sbjct: 192 RIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYK------ 245
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
E L +M+ S PD ++ + A+ AL
Sbjct: 246 --EALMLFREMQTSKIKPDEFTMVSVLTACAQLGAL 279
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 48/187 (25%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C + V +E++++ VK D + LF+ + +++H + ++ + ++ +N
Sbjct: 94 CPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHN 153
Query: 317 KVIEMYGKCGSMTDARRVFD---------------------------------------- 336
+I MY CG + AR +FD
Sbjct: 154 ALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQV 213
Query: 337 --------HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
M +R SW MI+GY E L LF +M+ ++P+E T ++V +AC
Sbjct: 214 DAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTAC 273
Query: 389 GSADAIE 395
A+E
Sbjct: 274 AQLGALE 280
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 226/398 (56%), Gaps = 37/398 (9%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++EA++ ++ G D F + C + E ++H + ++S + D+V+
Sbjct: 664 GNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVE 723
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ +++MY KCG + A ++F+ M R+ SW+ MI+GYA +GLG + +++FE+M +
Sbjct: 724 SALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRES 783
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF++V SAC A +E +FE M + GI P EHY ++ +LG+ G + + ++
Sbjct: 784 PDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKE 842
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGD---IDLEDHAEELMVDLDP-------------- 478
+I Q++P EP A W + R D IDL A ++++++P
Sbjct: 843 YI-QRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHA 901
Query: 479 ----------SKADPKKIPTPPPKKRTAISILDGKSRLV--EFRNPTLYRDDEKLKALNQ 526
++ ++ R+ +++ DG + + +P EKL L Q
Sbjct: 902 ATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 961
Query: 527 -MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++ + YVP T Y L+D+++E KE+ L YHSE+LAIA+ +++ + P+RI+KNLRVCGD
Sbjct: 962 NIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVCGD 1020
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH A + +S+++ R++I+RD+ RFHHFKDGKCSCGDYW
Sbjct: 1021 CHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 104/249 (41%), Gaps = 27/249 (10%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M G+ + F L E K+VH ++ + D V++N +I Y K G
Sbjct: 574 MMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGD 633
Query: 328 MTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M +F +M+D R SW+ MI+GY NG E + M G + TF + +
Sbjct: 634 MGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILN 693
Query: 387 ACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLP 442
AC S A+E +H ++S E LV + KCG + A + + Q+
Sbjct: 694 ACASVAALERGMELHAFGIRSHLESDVVVES--ALVDMYSKCGRVDYASKLFNSMTQRNE 751
Query: 443 FEPTAEFWEAL-RNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
F W ++ YAR HG L A E+ ++ S+ P + T +S+L
Sbjct: 752 FS-----WNSMISGYAR-HG---LGRKAIEIFEEMLRSRESPDHV--------TFVSVLS 794
Query: 502 GKSR--LVE 508
S LVE
Sbjct: 795 ACSHAGLVE 803
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C K ++VH ++ + D ++N +++MYG+CG+M+D +VF+ MA+ SW
Sbjct: 491 CAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSW 550
Query: 347 HLMINGYADNGL-GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
+ M+ A + E +++F M + GL PN+ TF+ + +A +E +H M
Sbjct: 551 NTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVM 610
Query: 405 KSEFGISPGTEHYL----GLVGVLGKCGHLF 431
K ++ L G +G C HLF
Sbjct: 611 KHGVMEDNVVDNALISCYAKSGDMGSCEHLF 641
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H ++ + DL L N ++ Y K + A +VFD M +R+ SW +++GY +
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 357 GLGDEGLQLFEQMRK---LGLQPNEQTFLAVFSAC--GSADAIEEAF-IHFESMKSEFGI 410
G+ +E ++F M + G +P TF + AC G D + A +H K+E+
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEY-- 198
Query: 411 SPGTEHYLGLVGVLGKC 427
+ T L+ + G C
Sbjct: 199 ASNTTVCNALISMYGSC 215
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 296 AKKVHDYFLQSTIRG-DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ VH + L++ + + ++N ++ MY KCG++ A ++F M SW+ +I+
Sbjct: 398 GRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALD 457
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPG 413
NG +E + + MR+ + P+ ++ S+C + +H +++K +G+
Sbjct: 458 QNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVK--WGLDLD 515
Query: 414 TEHYLGLVGVLGKCGHL 430
T LV + G+CG +
Sbjct: 516 TSVSNVLVKMYGECGAM 532
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 272 GVKADASCFYTLFELC--GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC--GS 327
G + + F TL C G P A +VH ++ + + N +I MYG C G
Sbjct: 160 GCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGP 219
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR----KLGLQPNEQTF 381
A+RVFD R + +W+ +++ YA G LF+ M+ ++ L+P E TF
Sbjct: 220 PILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTF 277
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 215/402 (53%), Gaps = 42/402 (10%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKV 318
G + + +G + D ++ ++C + E + + + + D+V+ + V
Sbjct: 523 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAV 582
Query: 319 IEMYGKCGSMTD-ARRVFDHMAD--RSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGL 374
+ M KCGS D R+F M D + + +W+ MI YA +G G + L+LF M+ + +
Sbjct: 583 MNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSV 642
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-TEHYLGLVGVLGKCGHLFEA 433
+P+ TF++V S C A +E+ F + GI EHY LV VLG+ G+L EA
Sbjct: 643 RPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREA 702
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
+ FI +K+P + W +L +GD++ + A ++L S +
Sbjct: 703 EDFI-RKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAA 761
Query: 482 -----DPKKIPTPPPKKRTAISILDGKSRLV------EF--------RNPTLYRDDEKLK 522
D ++ ++R + GKS +V EF ++ +Y + E+LK
Sbjct: 762 AGRWEDSIRVREDMAERRVKKRV-PGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLK 820
Query: 523 ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L ++E+ YVPDTR VLHD+++E KEQ L YHSE+LAIA+GLIS P R +R+IKNLRV
Sbjct: 821 GL--IREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRV 878
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
C DCH A K ++R+ RE+ VRD RFHHF KDG+CSCGDYW
Sbjct: 879 CKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + GD+++ ++ MYG G++ AR FD + +++ SW+ M+ Y DNG
Sbjct: 362 LHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGR 421
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
E ++LF M++ L PN+ ++LAV C D E IH E + + + +
Sbjct: 422 AREAMELFAAMKRQSLAPNKVSYLAVLGCC--EDVSEARSIHAEVVGNGL-FAQESSIAN 478
Query: 419 GLVGVLGKCGHLFEA 433
G+V + + G L EA
Sbjct: 479 GVVRMFARSGSLEEA 493
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ + + F + CG+ A+ +H + GD+V+ ++ MYG+CGS+ +
Sbjct: 231 EGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDE 290
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL-AVFSACG 389
+ VF+ MA R+ SW+ MI +A G ++ +M++ G +PN+ TF+ A+ +AC
Sbjct: 291 SIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 350
Query: 390 SA--DAIEEAFIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
S+ D E A +H E + GT LV + G G + A+ + +P +
Sbjct: 351 SSSQDLGESAALHGWIACAGLEGDVMVGT----ALVTMYGSTGAIDRARAAFD-AIPAKN 405
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W A+ +GD A EL + P K+
Sbjct: 406 IVS-WNAMLTA---YGDNGRAREAMELFAAMKRQSLAPNKV 442
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ VHD S + DL + +++ YGKCG + A VF + + W+ I A
Sbjct: 154 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 213
Query: 356 NGLG-DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPG 413
N D L L +M GL PN +F+A+ S+CG ++ A IH + E G
Sbjct: 214 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIH--ARVEELGFLGD 271
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIE 438
LV + G+CG + E+ E
Sbjct: 272 VVVATALVTMYGRCGSVDESIAVFE 296
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
Q R DL L N +++MY KC S+ DA F + R + +W+ +I +
Sbjct: 53 QGLARNDL-LGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPA------A 105
Query: 365 LFEQMRKLGLQ------PNEQTFLAVFSACGSAD 392
+F+ ++ L+ PN+ T +AV A S D
Sbjct: 106 VFDLYTRMKLEERAENRPNKLTIIAVLGAIASGD 139
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 192/355 (54%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H +++ + + + +I MY KCG + D+ + W MI Y
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGF 268
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G+E + LFEQM + GL N+ TFL++ AC E+ F+ M ++G+ P E
Sbjct: 269 HGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLE 328
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G L EA+ I + +P E W+ L + RIH + D+ E ++
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMI-RSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILR 387
Query: 476 LDPSKA-----------------DPKKIPTPP----PKKRTAISILDGKSRLVEFR---- 510
L+P + D K+ T KK +S L+ K+R+ +F
Sbjct: 388 LNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDK 447
Query: 511 -NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P D LK L +MK YVPDT V HD D E KE +L+ HSE+LAIA+GL++
Sbjct: 448 SHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNI 507
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P +P+R++KNLR+C DCH AIK++S I RE+IVRD RFHHFK GKCSCGDYW
Sbjct: 508 PPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ + G D ++ C + K+VH Y L+ +LV+ + + MY K G
Sbjct: 79 EMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSG 138
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ + +V M R++ +W+ +I G A NG + L L+ M+ GL+P++ T ++V S
Sbjct: 139 SLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVIS 198
Query: 387 ACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE- 444
+ A + IH E++K+ G + L+ + KCG L ++ + + L E
Sbjct: 199 SSAELATLFQGQQIHAEAIKA--GANSAVAVLSSLISMYSKCGCLEDSMKAL---LDCEH 253
Query: 445 PTAEFWEALRNYARIHG 461
P + W ++ HG
Sbjct: 254 PDSVLWSSMIAAYGFHG 270
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ +N +I + + G + A +VFD M +R++ +W+ M++G + GL LF +M
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81
Query: 371 KLGLQPNEQTFLAVFSACGSADA 393
+LG P+E T +V C A
Sbjct: 82 ELGFLPDEFTLGSVLRGCAGLRA 104
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 206/398 (51%), Gaps = 34/398 (8%)
Query: 258 QEGKVKEAIEL---MDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +E + L MD+ G ++ F L + +H + I+ ++
Sbjct: 305 QNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVI 364
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY KCG + + VF M +R + +W+ MI GY+ +GLG + L LF+ M G
Sbjct: 365 VGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAG 424
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN TF+ V SAC + E F + + F + PG EHY +V VL + G L EA
Sbjct: 425 ECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEA 484
Query: 434 QQFIEQ-KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---P 489
+ F+ ++ ++ A W L N IH + +L E ++ +DP + +
Sbjct: 485 ENFMRTTQVKWDVVA--WRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYA 542
Query: 490 PPKKRTAISILDGKSR-----------LVEFRNPT-LYRDD-----------EKLKALNQ 526
+ +++++ R +E RN ++ D K++ L +
Sbjct: 543 KARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLE 602
Query: 527 M-KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
M K+ YVP+ VLHD++ E KE L YHSE+LAIAYGL+ P+ P+R+IKNLR+C D
Sbjct: 603 MIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICED 662
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH A+K++S++ R +IVRD RFHHF+DG C+C D+W
Sbjct: 663 CHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L L + G++ EA+E++ D+GV D+ + ++ LCG + +VH L+ +
Sbjct: 199 LNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGL 258
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + + +++M+GKCG + AR+VFD + +R++ W ++ Y NG +E L L
Sbjct: 259 TFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSC 318
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + G NE TF + +A A+ + + + GI L+ + KCG
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALRHGDL-LHARVEKLGIKNRVIVGNALINMYSKCG 377
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I +Y KC + AR +FD M+ RS+ S+++++ GY +G E ++LF+ M Q
Sbjct: 59 NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSE---FGISPGTEHYL--GLVGVLGKCGHL 430
PNE F V SAC + + FE M+ F H++ LV + KC H+
Sbjct: 119 PNEYVFTTVLSACAHSGRV------FEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV 172
Query: 431 FEAQQFIEQK 440
A Q +E +
Sbjct: 173 DLALQVLESE 182
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 215/401 (53%), Gaps = 40/401 (9%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKV 318
G + + +G + D ++ ++C + E + + + + D+V+ + V
Sbjct: 519 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAV 578
Query: 319 IEMYGKCGSMTD-ARRVFDHMAD--RSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGL 374
+ M KCGS D R+F M D + + +W+ MI YA +G G + L+LF M+ + +
Sbjct: 579 MNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSV 638
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-TEHYLGLVGVLGKCGHLFEA 433
+P+ TF++V S C A +E+ F + GI EHY LV VLG+ G+L EA
Sbjct: 639 RPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREA 698
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
+ FI +K+P + W +L +GD++ + A ++L S +
Sbjct: 699 EDFI-RKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAA 757
Query: 482 -----DPKKIPTPPPKKRT-----AISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D ++ ++R S + K+R+ EF ++ +Y + E+LK
Sbjct: 758 AGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKG 817
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L ++E+ YVPDTR VLHD+++E KEQ L YHSE+LAIA+GLIS P R +R+IKNLRVC
Sbjct: 818 L--IREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVC 875
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
DCH A K ++R+ RE+ VRD RFHHF KDG+CSCGDYW
Sbjct: 876 KDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + GD+++ ++ MYG G++ AR FD + +++ SW+ M+ Y DNG
Sbjct: 358 LHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGR 417
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
E ++LF M++ L PN+ ++LAV C D E IH E + + + +
Sbjct: 418 AREAMELFAAMKRQSLAPNKVSYLAVLGCC--EDVSEARSIHAEVVGNGL-FAQESSIAN 474
Query: 419 GLVGVLGKCGHLFEAQ 434
G+V + + G L EA
Sbjct: 475 GVVRMFARSGSLEEAM 490
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ + + F + CG+ A+ +H + GD+V+ ++ MYG+CGS+ +
Sbjct: 227 EGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDE 286
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL-AVFSACG 389
+ VF+ MA R+ SW+ MI +A G ++ +M++ G +PN+ TF+ A+ +AC
Sbjct: 287 SIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 346
Query: 390 SA--DAIEEAFIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
S+ D E A +H E + GT LV + G G + A+ + +P +
Sbjct: 347 SSSQDLGESAALHGWIACAGLEGDVMVGT----ALVTMYGSTGAIDRARAAFD-AIPAKN 401
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
W A+ +GD A EL + P K+
Sbjct: 402 IVS-WNAMLTA---YGDNGRAREAMELFAAMKRQSLAPNKV 438
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ VHD S + DL + +++ YGKCG + A VF + + W+ I A
Sbjct: 150 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 209
Query: 356 NGLG-DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPG 413
N D L L +M GL PN +F+A+ S+CG ++ A IH + E G
Sbjct: 210 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIH--ARVEELGFLGD 267
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIE 438
LV + G+CG + E+ E
Sbjct: 268 VVVATALVTMYGRCGSVDESIAVFE 292
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
Q R DL L N +++MY KC S+ DA F + R + +W+ +I +
Sbjct: 53 QGLARNDL-LGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPA------A 105
Query: 365 LFEQMRKLGLQ------PNEQTFLAVFSACGSAD 392
+F+ ++ L+ PN T +AV A S D
Sbjct: 106 VFDLYTRMKLEERAENRPNRLTIIAVLGAIASGD 139
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 210/403 (52%), Gaps = 33/403 (8%)
Query: 253 LARLCQEGKVKE---AIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A +G+V E A +M + G+ T+ +C + K++H L+S
Sbjct: 249 IAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRK 308
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ L N +++MY KCG + +VFD M + + SW+ M+ G++ NG E L LF++
Sbjct: 309 NADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDE 368
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + G++PN TF+A+ S C + E F ++ +FG+ P EHY LV +LG+ G
Sbjct: 369 MIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSG 428
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-------- 480
EA + + +P P+ W +L N R++G++ L + E + +++P+
Sbjct: 429 KFDEALS-VAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLS 487
Query: 481 ---------ADPKKI----PTPPPKKRTAISILDGKSRLVEFR--NPTLYRDDEKLKAL- 524
D K++ KK S + K ++ F + +R + K +
Sbjct: 488 NIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIW 547
Query: 525 ----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
N +K YVP+T VLHDI++E K + HSERLA + LI+T A P+RI KNL
Sbjct: 548 NELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNL 607
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH+ +K +S++ R +++RD RFHHF++G CSC DYW
Sbjct: 608 RVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 248 PSVADLARLCQEGKVKEAIELMDKG------VKADASCFYTLFELCGNPKWYENAKKVHD 301
P + L LC+ G + +A+ L++ + + C + + E+ +K+H
Sbjct: 35 PFNSTLKSLCKWGNLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHL 94
Query: 302 YFLQS--TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDS--WHLMINGYADNG 357
+ L+S + + L K+I +Y CG + +ARRVF ++ + W M GY+ NG
Sbjct: 95 HLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNG 154
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD-AIEEAFIHFESMKSEFG 409
E L L+ M ++P F AC D A+ IH + +K + G
Sbjct: 155 FSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVG 207
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D V+NN ++ +Y + G + +VF+ M R++ SW+ +I G+A G E L F M
Sbjct: 209 ADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVM 268
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
++ G+ + T + C A+ IH + +KS
Sbjct: 269 QREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKS 306
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 212/396 (53%), Gaps = 37/396 (9%)
Query: 264 EAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKV 318
EA+E L G + D + C N ++VH L+ I + + +NN +
Sbjct: 326 EALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNAL 385
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I MY KCG++ DA+ +FD M + + S++ MI GYA +G+G + L LF++M ++ P
Sbjct: 386 IAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTN 445
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF++V +AC +E+ I+F MK +FGI P H+ ++ +LG+ G L EA++ IE
Sbjct: 446 ITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIE 505
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PF+P W AL RIHG+++L A ++ LDP A P
Sbjct: 506 -TIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQ 564
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKL-KALNQMKEST 531
K + KK+ S ++ R+ F +P + + E L + + ++K+
Sbjct: 565 DAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVG 624
Query: 532 YVPDTRYVLHDID----QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
Y P+ R D Q +E L +HSE+LA+++GL+ST P+ + KNLR+C DCH
Sbjct: 625 YTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCH 684
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NAIK +S +V RE+ VRD+ RFH FKDG+CSCG YW
Sbjct: 685 NAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 115/243 (47%), Gaps = 11/243 (4%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+ +G+ D ++ N + + H ++S + + + +I++Y KC
Sbjct: 229 LEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKC 288
Query: 326 G-SMTDARRVFDHMADRSMDSWHLMINGYAD-NGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
G M D R+VFD +++ + W+ MI+GY+ L DE L+ F Q++ +G +P++ + +
Sbjct: 289 GGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVC 348
Query: 384 VFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL--GLVGVLGKCGHLFEAQQFIEQK 440
V SAC + + + +H ++K + P + L+ + KCG+L +A+ +
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDI---PSNRISVNNALIAMYSKCGNLRDAKTLFD-T 404
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISIL 500
+P T + + YA+ HG H + M+++D + + I T +
Sbjct: 405 MPEHNTVSYNSMIAGYAQ-HGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTG-RVE 462
Query: 501 DGK 503
DGK
Sbjct: 463 DGK 465
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + K +H +++S + L+N + +Y KC ++ ARRVFDH
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
D ++ S++ +I+ YA + QLF++M QP+ ++ + +A + AF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQ 126
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCG 428
F M+ F G L G++ CG
Sbjct: 127 LFLEMREAFLDMDG----FTLSGIITACG 151
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYAD 355
+++H + + + + + N +I Y K G + +ARR+F ++ DR SW+ M+ Y
Sbjct: 158 RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGT 414
+ G + L+L+ +M GL + T +V +A + D + H + +KS G +
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKS--GYHQNS 275
Query: 415 EHYLGLVGVLGKCG 428
GL+ + KCG
Sbjct: 276 HVGSGLIDLYSKCG 289
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 218/414 (52%), Gaps = 39/414 (9%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
D VL S+ LA Q G E++ E+ KGV+ + T+ + + ++
Sbjct: 224 DAVLWNSM--LAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGRE 281
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + + + +I+MY KCGS+ A +F+ + ++ + SW+ +I GYA +GL
Sbjct: 282 IHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGL 341
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
E L LFE+M K QP+ TF+ +AC ++E + M + I+P EHY
Sbjct: 342 AVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYT 400
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+V +LG CG L EA I Q + P + W AL N + HG+++L + A E +++L+P
Sbjct: 401 CMVDLLGHCGQLDEAYDLIRQ-MDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEP 459
Query: 479 SKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF-------- 509
+ I KK A S ++ K+++ F
Sbjct: 460 DDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHP 519
Query: 510 RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
+ +Y + ++L+ L M+E+ YVPDT V HD++++ K + HSERLAIA+GLIST
Sbjct: 520 NSGAIYAELKRLEGL--MREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTL 577
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T L I KNLR+C DCH AIK +S+I RE+ VRD R+HHF+ G CSCGDYW
Sbjct: 578 PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 18/265 (6%)
Query: 223 HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL----MDKGVKADAS 278
+ + N L N + ++ P G+ L + + G + AI L ++ G+K D
Sbjct: 103 YSVCNSLRNAHHLFDKIPKGNLFLWNVL--IRAYAWNGPHETAISLYHQMLEYGLKPDNF 160
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
+ + C + +H+ ++S D+ + +++MY KCG + DAR VFD +
Sbjct: 161 TLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKI 220
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF 398
DR W+ M+ YA NG DE L L +M G++P E T + V S+ SAD
Sbjct: 221 VDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISS--SADI--ACL 276
Query: 399 IHFESMKSEFGISPGTEH----YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
H + FG G ++ L+ + KCG + A E+ E W A+
Sbjct: 277 PHGREIHG-FGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLR--EKRVVSWNAII 333
Query: 455 NYARIHG-DIDLEDHAEELMVDLDP 478
+HG ++ D E +M + P
Sbjct: 334 TGYAMHGLAVEALDLFERMMKEAQP 358
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L E C + K E K++H Q I +L L K++ Y C S+ +A +FD +
Sbjct: 61 YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP 120
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
++ W+++I YA NG + + L+ QM + GL+P+ T V AC + I E
Sbjct: 121 KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRV 180
Query: 399 IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
IH ++S E + G LV + KCG + +A+ ++ + + A W ++
Sbjct: 181 IHERVIRSGWERDVFVGA----ALVDMYAKCGCVVDARHVFDKIV--DRDAVLWNSM 231
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 211/401 (52%), Gaps = 37/401 (9%)
Query: 257 CQE-GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
C E G+ +EA+E+ K G K + ++ C + K++H Y + GD
Sbjct: 290 CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD 349
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L ++ MY KCG + +R VFD M + + +W+ MI A +G G E L LF++M
Sbjct: 350 LTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLL 409
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
+QPN TF V S C + +EE F SM + + P HY +V + + G L
Sbjct: 410 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLN 469
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------- 478
EA +FI Q +P EPTA W AL R++ +++L + + + +++P
Sbjct: 470 EAYKFI-QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNIL 528
Query: 479 ------SKADPKKIPTPP--PKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLK 522
S+A +I K S L +++ F + +Y ++L
Sbjct: 529 VTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDEL- 587
Query: 523 ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+ +MK + Y PDT YVL DIDQE K ++L HSE+LA+A+G+++ ++ +R+ KNLR+
Sbjct: 588 -VEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 646
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCHNAIK MS++VG ++VRD+ RFHHFK+G CSC D W
Sbjct: 647 CGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L G EAI+ L ++G+K D F + C K+VHD + +
Sbjct: 50 ISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGV 109
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + N +I YGKC + ARRVFD + R + SW + + Y G +G+ +F +
Sbjct: 110 MSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFRE 169
Query: 369 MRKLGLQPNEQTFLAVFSACG 389
M G++PN T ++ AC
Sbjct: 170 MGWSGVKPNPMTVSSILPACA 190
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVK + ++ C K ++ K++H + ++ + +L + + ++ +Y KC S+ +A
Sbjct: 174 GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREA 233
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
R VFD M R + SW+ ++ Y N ++G LF +M + G++ +E T+ AV C
Sbjct: 234 RMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMEN 293
Query: 392 DAIEEAFIHFESMKSEFGISP 412
EEA F M+ + G P
Sbjct: 294 GRSEEAVEMFRKMQ-KMGFKP 313
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++I + G AR++FD++ + +I+ +GL +E ++++ +++ G
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 374 LQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
++P+ FLA AC S DA+ +H ++ + G+ L+ GKC
Sbjct: 74 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRC--GVMSDVFVGNALIHAYGKC 126
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 219/440 (49%), Gaps = 34/440 (7%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----D 270
S+ + G +++ N ++ P D V ++ D + + KEA+EL
Sbjct: 308 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMID--GYIRSNRFKEALELFRNMQA 365
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
VK D ++ C + E + + Y ++ I+ DL + N +I+MY KCG +
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDK 425
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F M+ R +W MI G A NG G++ L +F M K + P+E T++ V SAC
Sbjct: 426 AESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTH 485
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+++ +F M S+ GI P HY LV +L + G L EA + IE +P + + W
Sbjct: 486 TGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIEN-MPIKANSIVW 544
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
AL R++ + D+ + + +++L+P + +
Sbjct: 545 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 604
Query: 490 PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDI 543
KK S+++ R+ EF +P D KL + Q +K + Y PD V DI
Sbjct: 605 GIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDI 664
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+E KE ++ HSE+LAIA+GLI++P +RI KNLR+C DCHN K++S++ RE+IV
Sbjct: 665 AEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIV 724
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHFK G CSC DYW
Sbjct: 725 RDRTRFHHFKHGLCSCKDYW 744
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 51/268 (19%)
Query: 223 HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADAS 278
+ + QL+ + CP D + + ++ + GK +E+ L DK V
Sbjct: 184 YLLCGQLDTARGVFDVCPKADVITWNMI--ISAYNKVGKFEESRRLFLVMEDKQVLPTTV 241
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD-------- 330
+ C K KKVH Y + +LVL N +I+MY CG M
Sbjct: 242 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
Query: 331 -----------------------ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
AR FD M ++ SW MI+GY + E L+LF
Sbjct: 302 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFR 361
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVG 422
M+ ++P+E T ++V +AC A+E +I +K++ + L+
Sbjct: 362 NMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRN------ALID 415
Query: 423 VLGKCGHLFEAQQF---IEQKLPFEPTA 447
+ KCG + +A+ + Q+ F TA
Sbjct: 416 MYFKCGDVDKAESIFREMSQRDKFTWTA 443
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E++ +GVK D F LF+ E +++H + L+ ++ ++ ++ +++MY C
Sbjct: 128 LEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC 187
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR VFD + +W+++I+ Y G +E +LF M + P T + V
Sbjct: 188 GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL 247
Query: 386 SAC 388
SAC
Sbjct: 248 SAC 250
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG--KCGSMTDARRVFDH 337
+L E C + + ++VH ++ + + VL N+V+ + G ARR+FD
Sbjct: 42 LISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 98
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ + ++ W+ MI GY+ G+ L+ +M + G++P+ TF +F A+E
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALE 156
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 204/390 (52%), Gaps = 31/390 (7%)
Query: 264 EAIEL---MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
EA++L M K + D L CG+ E + +H L++ +L + N +I+
Sbjct: 839 EALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALID 898
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY KCGS+ AR +FD + ++ + +W +MI+G +GLG+E + F++MR G++P+E T
Sbjct: 899 MYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEIT 958
Query: 381 FLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQK 440
F ++ AC + + E + F SM SE + P EHY +V +L + G+L +A IE
Sbjct: 959 FTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIET- 1017
Query: 441 LPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD------------------ 482
+P +P A W AL RIH D++L + E + +L+P A
Sbjct: 1018 MPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEV 1077
Query: 483 ---PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEK--LKALN----QMKESTYV 533
++I KK S ++ + + F + K LN +MK +
Sbjct: 1078 KKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHS 1137
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 593
P RY L + KE AL HSE+LA+A+G+++ P+ +R+ KNLRVC DCH K M
Sbjct: 1138 PKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFM 1197
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S+ RE+I+RD+ RFHHFKDG CSC D+W
Sbjct: 1198 SKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 242 GDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAK 297
G + + + +A +EG +AI E+ KGV D ++ C + +
Sbjct: 716 GQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGR 775
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VH+Y ++ + L ++N +++MY KCGSM +A VF + + + SW+ MI GY+ N
Sbjct: 776 DVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNS 835
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH 416
L +E L+LF +M+K +P+ T + ACGS A+E IH +++ G S
Sbjct: 836 LPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRN--GYSSELHV 892
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG L A+ + +P E W + + +HG
Sbjct: 893 ANALIDMYVKCGSLVHARLLFDM-IP-EKDLITWTVMISGCGMHG 935
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 191 NFQQPRSPNQWNNQQNQGYPQARNSY---QQVSPGHQIPNQLNNVPNNMNQCPAGDQVLP 247
NF + N ++ N Y + RN + QQ S + + + L+ VP + + A ++
Sbjct: 365 NFGTYSTCNCHTSEAN--YAKPRNCFIFFQQPSRKYFLSSYLD-VPRSSTRVGAFAKLDE 421
Query: 248 PSVADLARLCQEGKVKEAIEL--MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
+ + + C+ G ++ A+EL M + + D + + ++ +LC K + K VH
Sbjct: 422 NT--KICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISS 479
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDH-MADRSMDSWHLMINGYADNGLGDEGLQ 364
+ I + VL K++ MY CG++ + RR+FDH ++D + W+LM++ YA G E +
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFG 409
LF++M+KLG+ N TF + + + E IH K FG
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFG 585
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ V D + C N + +H +++ +++ NN +++MY KC
Sbjct: 643 VQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKC 702
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G++ DA + F+ M +++ SW +I Y GL D+ ++LF +M G+ P+ + +V
Sbjct: 703 GNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVL 762
Query: 386 SACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC +++++ +H K+ + + L+ + KCG + EA Q +P +
Sbjct: 763 HACACGNSLDKGRDVHNYIRKNNMALCLPVSN--ALMDMYAKCGSMEEAYLVFSQ-IPVK 819
Query: 445 PTAEFWEALRNYAR 458
+ + Y++
Sbjct: 820 DIVSWNTMIGGYSK 833
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +E+I L K G+ ++ F + + K++H + +
Sbjct: 532 GDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV 591
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y K G + A ++FD + DR + SW+ MI+G NG L+ F QM L +
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+ T + +AC + ++ +H + +K+ F S L+ + KCG+L +A
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACF--SREVMFNNTLLDMYSKCGNLNDAI 709
Query: 435 QFIEQKLPFEPTAEFWEAL 453
Q E+ + T W +L
Sbjct: 710 QAFEKM--GQKTVVSWTSL 726
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 209/393 (53%), Gaps = 38/393 (9%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G E + +++ +K + F ++ C + K++H Y ++S
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 328
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
G++ + + +++MY KCG++ AR +FD M M SW MI GYA +G + + LF++
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M G++PN F+AV +AC A ++EA+ +F SM ++ I PG EHY + +LG+ G
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 448
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA +FI + EPT W L R+H +I+L + + + +DP
Sbjct: 449 RLEEAYEFISD-MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLS 507
Query: 482 ----------DPKKIPTP----PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
D +K+ KK+ A S ++ K+++ F +P R +E LK
Sbjct: 508 NIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALK 567
Query: 523 A-LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L QM+ YV DT VLHD+++E K L HSERLAI +G+ISTPA T +R+ KNLR
Sbjct: 568 VLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 627
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKD 614
VC DCH A K +S+IVGRE++ F+ F D
Sbjct: 628 VCVDCHTATKFISKIVGREIV------FYFFLD 654
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H Y +++ D+ + + +I+MY KC + D+ RVF + SW+ +I G
Sbjct: 215 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQ 274
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
NG+ DEGL+ F+QM ++PN +F ++ AC + +H ++S F +
Sbjct: 275 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFI 334
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + KCG++ A+ ++ ++ + W A+ +HG
Sbjct: 335 AS--ALVDMYAKCGNIRTARWIFDKMELYDMVS--WTAMIMGYALHG 377
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
R+VF+ M R + SW+ +I+G A NG+ ++ L + +M L+P+ T +V
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 203
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 220/416 (52%), Gaps = 35/416 (8%)
Query: 242 GDQVLPPSVADLARLCQEG---KVKEAIELMDKGVKADA----SCFYTLFELCGNPKWYE 294
G+ V V A L G K +EA+E+ + ++ D S F + C + E
Sbjct: 307 GEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIE 366
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K +H ++ + + ++ MY KCG ++DA VF + ++++ SW+ +I G A
Sbjct: 367 RGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCA 426
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+G G L LF QM + G+ P+ T + SAC + +++A F + ++
Sbjct: 427 QHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTI 486
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
EHY +V VLG+CG L EA+ + +P + + W AL + R H ++DL A +
Sbjct: 487 EHYTSMVDVLGRCGELEEAEAVV-MSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIF 545
Query: 475 DLDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF---- 509
+++P + +K+ K+ S L K + +F
Sbjct: 546 EIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSAD 605
Query: 510 -RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+P + +KL+ L ++KE YVPD ++ LHD++ E KE+ L YHSERLAIA+GL+S
Sbjct: 606 RSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLS 665
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T + + ++KNLRVCGDCHNAIK+M++IV RE++VRD+ RFH FK+G CSCGDYW
Sbjct: 666 TVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCG------NPK 291
Q P+ D + S+ +A L GK ++A+ L + + A C + +CG P
Sbjct: 206 QMPSRDVISWSSM--IAGLDHNGKSEQALVLF-RDMVASGVCLSSGVLVCGLSAAAKIPA 262
Query: 292 WYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN 351
W + F D ++ ++ Y C M A RVF + +S+ W ++
Sbjct: 263 WRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLT 322
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGI 410
GY N E L++F +M ++ + PNE +F + ++C + IE IH ++K G+
Sbjct: 323 GYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVK--MGL 380
Query: 411 SPGTEHYLG--LVGVLGKCGHLFEA 433
G Y+G LV + KCG++ +A
Sbjct: 381 ESGG--YVGGSLVVMYSKCGYVSDA 403
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q +++EAI+L + D + ++ + C + A+K+ D + T+ L +
Sbjct: 98 QNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDG 157
Query: 318 VIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
++ + G + +A +F M DR + +W+ MI+GY NG D+ LQLF QM
Sbjct: 158 LLRL----GIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDALQLFCQM 207
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ N +I Y G + DA ++F M R + SW MI G NG ++ L LF M
Sbjct: 180 DVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMV 239
Query: 371 KLGLQPNEQTFLAVFSA 387
G+ + + SA
Sbjct: 240 ASGVCLSSGVLVCGLSA 256
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 209/378 (55%), Gaps = 27/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K ++ T+ C K++H Y +++ + D+ + + +++MY KCG + +R
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD + +++ +W+++I Y +G G E + L M G++PNE TF++VF+AC +
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E F MK ++G+ P ++HY +V +LG+ G + EA Q + A W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPP 491
L +RIH ++++ + A + ++ L+P+ A + +
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 492 KKRTAISILDGKSRLVEF-RNPTLYRDDEKLKA-----LNQMKESTYVPDTRYVLHDIDQ 545
+K S ++ + +F + + EKL +M++ YVPDT VLH++++
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
+ KE L HSE+LAIA+G+++T T +R+ KNLRVC DCH A K +S+IV RE+I+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 606 NKRFHHFKDGKCSCGDYW 623
+RFH FK+G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-ST 307
L+ LCQ ++ EA+E ++ +GV+ D ++ C + + K++H Y L+ +
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + + + +++MY C + RRVFD M DR + W+ MI GY+ N E L LF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 368 QMRK-LGLQPNEQTFLAVFSACGSADA 393
M + GL N T V AC + A
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGA 420
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 263 KEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
KEA+ L G+ A+++ + C + + +H + ++ + D + N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL----- 372
+++MY + G + A R+F M DR + +W+ MI GY + ++ L L +M+ L
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 373 ------GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGV 423
L+PN T + + +C + A+ + IH ++K+ ++ G+ LV +
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS----ALVDM 561
Query: 424 LGKCGHLFEAQQFIEQ 439
KCG L +++ +Q
Sbjct: 562 YAKCGCLQMSRKVFDQ 577
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGN---PKWYENAKKVHDYFLQ 305
++ LC K + A+E ++D+ V+ + ++ C N P+ K+VH Y L+
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 306 STIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+G+L + N ++ MYGK G + ++ + R + +W+ +++ N E L
Sbjct: 231 ---KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +M G++P+E T +V AC
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPAC 312
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGK 324
++++ G+K D F L + + + E K++H + + D V + N ++ +Y K
Sbjct: 86 VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRK 145
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CG +VFD +++R+ SW+ +I+ + L+ F M ++P+ T ++V
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 385 FSAC 388
+AC
Sbjct: 206 VTAC 209
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 209/378 (55%), Gaps = 27/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K ++ T+ C K++H Y +++ + D+ + + +++MY KCG + +R
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD + +++ +W+++I Y +G G E + L M G++PNE TF++VF+AC +
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E F MK ++G+ P ++HY +V +LG+ G + EA Q + A W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPP 491
L +RIH ++++ + A + ++ L+P+ A + +
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 492 KKRTAISILDGKSRLVEF-RNPTLYRDDEKLKA-----LNQMKESTYVPDTRYVLHDIDQ 545
+K S ++ + +F + + EKL +M++ YVPDT VLH++++
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
+ KE L HSE+LAIA+G+++T T +R+ KNLRVC DCH A K +S+IV RE+I+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 606 NKRFHHFKDGKCSCGDYW 623
+RFH FK+G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-ST 307
L+ LCQ ++ EA+E ++ +GV+ D ++ C + + K++H Y L+ +
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + + + +++MY C + RRVFD M DR + W+ MI GY+ N E L LF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 368 QMRK-LGLQPNEQTFLAVFSACGSADA 393
M + GL N T V AC + A
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGA 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 263 KEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
KEA+ L G+ A+++ + C + + +H + ++ + D + N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL----- 372
+++MY + G + A R+F M DR + +W+ MI GY + ++ L L +M+ L
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 373 ------GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGV 423
L+PN T + + +C + A+ + IH ++K+ ++ G+ LV +
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS----ALVDM 561
Query: 424 LGKCGHLFEAQQFIEQ 439
KCG L +++ +Q
Sbjct: 562 YAKCGCLQMSRKVFDQ 577
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGN---PKWYENAKKVHDYFLQ 305
++ LC K + A+E ++D+ V+ + ++ C N P+ K+VH Y L+
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 306 STIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+G+L + N ++ MYGK G + ++ + R + +W+ +++ N E L
Sbjct: 231 ---KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +M G++P+E T +V AC
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPAC 312
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGK 324
++++ G+K D F L + + + E K++H + + D V + N ++ +Y K
Sbjct: 86 VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRK 145
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CG +VFD +++R+ SW+ +I+ + L+ F M ++P+ T ++V
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 385 FSAC 388
+AC
Sbjct: 206 VTAC 209
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 203/380 (53%), Gaps = 28/380 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV D + ++ +C K++H + + D+ + N +IEMY KCGS+ +
Sbjct: 348 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 407
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ +VF M + + +W +I+ G G + ++ F +M G+ P+ F+A+ AC
Sbjct: 408 SFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 467
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ +EE +F MK ++ I P EHY +V +L + L +A+ FI +P +P + W
Sbjct: 468 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFI-LSMPLKPDSSIW 526
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTP 489
AL + R+ GD ++ + E +++L+P ++ K I
Sbjct: 527 GALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 586
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALNQ----MKESTYVPDTRYVLHDI 543
KK S ++ ++++ F T + + +E K L M + Y+ + ++VLHDI
Sbjct: 587 GLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 646
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D++ K L HSERLAIA+GL++T TPL+++KNLRVC DCH K +S+IV REL+V
Sbjct: 647 DEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLV 706
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFH FKDG CSCGDYW
Sbjct: 707 RDANRFHVFKDGACSCGDYW 726
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 256 LCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L G EA+ L + ++ D F ++ C +E AK +HD L D
Sbjct: 90 LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSD 149
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L + N +I+MY + + AR+VF+ M R + SW+ +I+GY NG +E L+++ Q K
Sbjct: 150 LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIK 209
Query: 372 LGLQ------PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVL 424
L ++ P+ T ++ ACG +E ++H + S + + L+ +
Sbjct: 210 LFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI--LINMY 267
Query: 425 GKCGHLFEAQQ 435
KCG+L +Q+
Sbjct: 268 AKCGNLLASQE 278
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K +E++++ K D ++ + CG+ E K VHDY + S D +N +I M
Sbjct: 208 IKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINM 266
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y KCG++ ++ VF M + SW+ MIN Y NG + L++FE M+ + T+
Sbjct: 267 YAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK----ARDIITW 322
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
+ ++C ++ M++E G++P L ++ V
Sbjct: 323 NTIIASCVHSEDCNLGLRMISRMRTE-GVTPDMATMLSILPV 363
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADN 356
K+H + + ++ + K+I Y T + VF + ++ W+ +I N
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS----EFGISP 412
GL E L L+ + +++ LQP+ TF +V +AC + FE KS +
Sbjct: 94 GLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------GLLDFEMAKSIHDRVLDMGF 146
Query: 413 GTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G++ Y+G L+ + + L +A++ E+ +P W +L
Sbjct: 147 GSDLYIGNALIDMYCRFNDLDKARKVFEE-MPLRDVVS-WNSL 187
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 219/440 (49%), Gaps = 34/440 (7%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----D 270
S+ + G +++ N ++ P D V ++ D + + KEA+EL
Sbjct: 287 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMID--GYIRSNRFKEALELFRNMQA 344
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
VK D ++ C + E + + Y ++ I+ DL + N +I+MY KCG +
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDK 404
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F M+ R +W MI G A NG G++ L +F M K + P+E T++ V SAC
Sbjct: 405 AESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTH 464
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+++ +F M S+ GI P HY LV +L + G L EA + IE +P + + W
Sbjct: 465 TGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIEN-MPIKANSIVW 523
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTP 489
AL R++ + D+ + + +++L+P + +
Sbjct: 524 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 583
Query: 490 PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDI 543
KK S+++ R+ EF +P D KL + Q +K + Y PD V DI
Sbjct: 584 GIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDI 643
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
+E KE ++ HSE+LAIA+GLI++P +RI KNLR+C DCHN K++S++ RE+IV
Sbjct: 644 AEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIV 703
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHFK G CSC DYW
Sbjct: 704 RDRTRFHHFKHGLCSCKDYW 723
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 51/268 (19%)
Query: 223 HQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADAS 278
+ + QL+ + CP D + + ++ + GK +E+ L DK V
Sbjct: 163 YLLCGQLDTARGVFDVCPKADVITWNMI--ISAYNKVGKFEESRRLFLVMEDKQVLPTTV 220
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD-------- 330
+ C K KKVH Y + +LVL N +I+MY CG M
Sbjct: 221 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
Query: 331 -----------------------ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
AR FD M ++ SW MI+GY + E L+LF
Sbjct: 281 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFR 340
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIE-----EAFIHFESMKSEFGISPGTEHYLGLVG 422
M+ ++P+E T ++V +AC A+E +I +K++ + L+
Sbjct: 341 NMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRN------ALID 394
Query: 423 VLGKCGHLFEAQQF---IEQKLPFEPTA 447
+ KCG + +A+ + Q+ F TA
Sbjct: 395 MYFKCGDVDKAESIFREMSQRDKFTWTA 422
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E++ +GVK D F LF+ E +++H + L+ ++ ++ ++ +++MY C
Sbjct: 107 LEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC 166
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR VFD + +W+++I+ Y G +E +LF M + P T + V
Sbjct: 167 GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL 226
Query: 386 SAC 388
SAC
Sbjct: 227 SAC 229
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG--KCGSMTDARRVFDH 337
+L E C + + ++VH ++ + + VL N+V+ + G ARR+FD
Sbjct: 21 LISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 77
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ + ++ W+ MI GY+ G+ L+ +M + G++P+ TF +F A+E
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALE 135
>gi|218198170|gb|EEC80597.1| hypothetical protein OsI_22944 [Oryza sativa Indica Group]
Length = 563
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 18/346 (5%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E ++VH + L+ DL+L+N +++MY KCGS+ DA +F M R
Sbjct: 232 SVLRACTGLVTLEVGRQVHAHVLKYD--KDLILHNALLDMYCKCGSLQDADALFGRMPQR 289
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
+ SW MI+G A NG E L++F+ M+ G +PN T + V AC A +E+ + +F
Sbjct: 290 DVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVLFACSHAGLVEDGWYYF 349
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
SM+ FGI P EH +V +LG+ G L +A +FI + + F+P + W L R+H
Sbjct: 350 SSMEKLFGIQPEREHCNCMVDLLGRAGKLDDAVKFIHE-MNFQPDSVIWRTLLGACRMHK 408
Query: 462 DIDLEDHAEELMVDLDPSKADPKK----IPTPPPKKRTAISILDGKSRLVEFRNPTLYRD 517
+ DL +A + ++ L+P D +K + KK S ++ +S + E
Sbjct: 409 NADLAAYAAKEILRLEPDDQDAEKSWKMMRDRGVKKDPGRSWIELESIIQELS------- 461
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ +++ Y P T +VL D+ E KE L YHSE+LAIA+G ++ P+RI+
Sbjct: 462 ----RLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIM 517
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+CGDCH K++S+ G+ +I+RD RFHHF+DG CSC DYW
Sbjct: 518 KNLRICGDCHAFAKLVSKSEGKVIIIRDPVRFHHFQDGVCSCNDYW 563
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 248 PSVADLARLCQEGKVKEAIELMDKGV----KADASCFYTLFELCGNPKWYENAKKVHDYF 303
P + +RLC G +++A+ L+ AD L +LC + + +H +
Sbjct: 34 PLLVAFSRLCARGPLRDALALLPDLAAAGLTADPVAVSRLIKLCVRHGTPSDGRLIHRHV 93
Query: 304 LQSTIRGD--------LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
GD L ++N ++ +Y K G + DA R+FD M +++ SW ++ A+
Sbjct: 94 FGG---GDVAAPSCSSLFVSNSLVSLYAKFGLLDDALRLFDGMPHKNVVSWTTVVAALAN 150
Query: 356 -NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
G ++ L+LF M + G+ PN TF ++ AC +
Sbjct: 151 ARGRKEDALRLFVAMLRDGVAPNMYTFSSILGACST 186
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 222/416 (53%), Gaps = 35/416 (8%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYE 294
P+ D+V ++ LA Q G+ A+EL+ D A F TL + CGN
Sbjct: 194 PSRDEVSWTTM--LAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSAIA 251
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ +HD + S + D+VL+ ++ MY KCG + +AR +FD + + ++ M+ YA
Sbjct: 252 QGRHLHDRIITSGVCIDVVLHTALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYA 311
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
NG + L+LF M + G +P+ TF V AC +++A+ +F +++ + GI
Sbjct: 312 RNGHFGDALKLFWSMEQDGYKPDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVA 371
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
EH+ V +L + G L +A++F+ ++P P + W +L RIH ++++ A E +
Sbjct: 372 EHFGCAVDLLARAGWLADAEKFL-NRMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVF 430
Query: 475 DLDPSKADPKKIPT------------------------PPPKKRTAISILDGKSRLV--E 508
L P +A P + + P R+ I I S + +
Sbjct: 431 RLAPHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGD 490
Query: 509 FRNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+P L + ++++ +++ MKE YVPDT+ VLHD ++E KE L +HSE+LAI GLI
Sbjct: 491 SWHPDLVQICQEIQRVSKVMKEHGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIK 550
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP +T + I+KN+RVC DCH A K++S++ R++++RD FHH +DG CSC DYW
Sbjct: 551 TPPKTTISIVKNIRVCPDCHTAAKVISKVTERKIVIRDINLFHHMEDGNCSCRDYW 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G DA +F + E + + + + D V+ N ++ MY +CG M D
Sbjct: 126 RGCHPDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHDPVVANSLLNMYRRCGGMDD 185
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ-PNEQTFLAVFSACG 389
R F M R SW M+ G G L+L M + G + + TF + ACG
Sbjct: 186 FERAFWAMPSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACG 245
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP-TAE 448
+ AI + H G+ + L+ + KCG + EA++ +Q L EP
Sbjct: 246 NLSAIAQGR-HLHDRIITSGVCIDVVLHTALLNMYAKCGRVDEARELFDQTL--EPNNIT 302
Query: 449 FWEALRNYAR 458
F + YAR
Sbjct: 303 FSSMVAAYAR 312
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 16/133 (12%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G V+EA+EL L C + A ++H L + L+NK++
Sbjct: 28 GLVREAVEL--------------LLHRCAAERALPQAHQLHALMLATGALRSRYLSNKLV 73
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+ YG+CG + A VF D ++ SW ++I+ N L + M+ G P+
Sbjct: 74 QAYGQCGDVESAHAVFARQPDPNVFSWMMLISACLRNARPRAALGHYRAMQLRGCHPDAH 133
Query: 380 TFLAVFSACGSAD 392
A+F C AD
Sbjct: 134 VVSAIF--CAVAD 144
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 208/401 (51%), Gaps = 36/401 (8%)
Query: 258 QEGKVKEAIELMDKGV------KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G ++A+ L D+ + K + ++ C E +++HD+ + +
Sbjct: 290 QNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLN 349
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ + MY KC S+ +AR FD +A +++ +W+ MI YA +G G E + +FE M
Sbjct: 350 SSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENM 409
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G+QP+ TF+ + S C + I+ HF M + + P EHY +V +LG+ G
Sbjct: 410 LRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGR 469
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------- 481
L EA++ I Q +P + W AL R H ++++ + A + L+P +
Sbjct: 470 LVEAKELISQ-MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSN 528
Query: 482 ---------DPKKIPTPPP----KKRTAISILD--GKSRLVEFRNPTLYRDDEKLKALN- 525
+ KK+ KK S ++ GKS L + + + E K L
Sbjct: 529 LYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEA 588
Query: 526 ---QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
++K + Y+PDT +VLHDI +E KE L HSE+LAIA+GL++T LR+ KNLR+
Sbjct: 589 LPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRI 648
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH A K +S+I RE+IVRD RFH FKDG CSCGDYW
Sbjct: 649 CGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 34/181 (18%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + VH L+ + GD + +I+MY KCG + DAR++FD M R M SW
Sbjct: 191 CADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASW 250
Query: 347 H-------------------------------LMINGYADNGLGDEGLQLFEQMRKLG-- 373
+ MI+GY NG ++ L LF++M + G
Sbjct: 251 NALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE 310
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PN T ++V AC + A+E + G+ + L G+ KC L EA
Sbjct: 311 MKPNWVTIVSVLPACAQSAALERGR-RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEA 369
Query: 434 Q 434
+
Sbjct: 370 R 370
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 211/401 (52%), Gaps = 30/401 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A++ R E +K E+ V AD + F + + N K++H ++S
Sbjct: 417 ANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM- 475
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
++ +++MY C S+ DA + F+ M++R++ +W+ +++ YA NG G L+ FE+M
Sbjct: 476 NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMI 535
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G QP+ +FL + +AC +EE +F M + ++P EHY +V L + G
Sbjct: 536 MSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRF 595
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL-------------- 476
EA++ + Q +PFEP W ++ N RIH + L A + ++
Sbjct: 596 DEAEKLMGQ-MPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSN 654
Query: 477 --------DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKA 523
D K + +K A S ++ K ++ F ++P K++
Sbjct: 655 IFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEM 714
Query: 524 L-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
L QM++ Y PD ++D+E+K +L YHSERLAIA+ LI+TP +P+ ++KNLR
Sbjct: 715 LAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRA 774
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH AIK++S+IVGRE+ VRD+ RFHHF+DG CSCGDYW
Sbjct: 775 CTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV---LNNKVIEMYG 323
E+ G + D + TL C + E AK+++ Q G + + N +++ Y
Sbjct: 130 EMHRSGSQPDYVTYITLLTGCND---LEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYF 186
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
K G + ARR+F M S+++MI GYA+NGL +E ++LF +M+ LG +P++ TF A
Sbjct: 187 KTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAA 246
Query: 384 VFSACGSADAIEEAF---IHFESMKSEF 408
V SA D + AF IH +K+ F
Sbjct: 247 VISASVGLD--DTAFGQQIHGFVVKTSF 272
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 214 NSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK-- 271
N++ H N++ + N M P D V + + GKVKE+I+L +
Sbjct: 280 NAFLDFYSKHDCVNEVRKLFNEM---PELDGVSYNVI--ITAYAWVGKVKESIDLFQELQ 334
Query: 272 --GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
F T+ + + + +++H + S D ++N +++MY KCG
Sbjct: 335 FTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFE 394
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
+A R+F ++ RS W MI+ GL + GL+LF +MR+ + ++ TF V A
Sbjct: 395 EADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASA 454
Query: 390 SADAI 394
+ +I
Sbjct: 455 NLASI 459
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I Y K G++T ARR+FD +R++ +W MI Y+ + + +LF +M + G QP+
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 378 EQTFLAVFSACGSADAIEEAF 398
T++ + + C + +E +
Sbjct: 140 YVTYITLLTGCNDLEVAKELY 160
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 212/392 (54%), Gaps = 32/392 (8%)
Query: 263 KEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA+ ++ +GV +++ L C + + K++H +++ D+ + +
Sbjct: 743 KEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 802
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY K S+ +A +VF + ++++ SW+ MI G+A GLG E + +F +M+K+G+ P+
Sbjct: 803 IDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDA 862
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF A+ SAC ++ I E + +F+SM +++ I P EHY +V +LG+ G+L EA I
Sbjct: 863 ITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI- 921
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------- 482
+P +P A W AL RIH ++ + A + + L+P+ +
Sbjct: 922 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 981
Query: 483 -----PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD------EKLKALNQMKEST 531
+ + + R S + R+ F + D E + +++MK+
Sbjct: 982 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1041
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPD V ++D+ K++ LL H+E+LAI YGLI A P+R+IKN R+C DCH+A K
Sbjct: 1042 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 1101
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S + REL +RD RFHHF++GKCSC D+W
Sbjct: 1102 YISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 258 QEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYEN-AKKVHDYFLQSTIRGDL 312
Q K+++ +EL K +KA+ + + + + + N K+ H Y L++ D+
Sbjct: 601 QSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDV 660
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I+MY K S+T A+ VFD+M +R++ +W+ +++GY+ G+ ++ L+L QM K
Sbjct: 661 YVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 720
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G++P+ T+ + S +EA F M+ E G+ P + + +L C L
Sbjct: 721 GIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE-GVMPNSA---SITCLLRACASL 774
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 218/403 (54%), Gaps = 33/403 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA Q GK EA+ L D+ GVK + +L C + + +H Y + I
Sbjct: 186 LACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRI 245
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++ +++MY KCG ++ A +VF+ M + + +W+ +I G A +G E +LF++
Sbjct: 246 EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKE 305
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ G++PN+ TF+A+ SAC A ++E + M S +GI P EHY ++ +L + G
Sbjct: 306 MKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAG 365
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA + I +P EP AL RIHG+ +L + + +++L P +
Sbjct: 366 LLEEAMELI-GTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 424
Query: 482 ----------DPKKI----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
D +K+ K +S+++ K + F +P + EKL
Sbjct: 425 NIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLN 484
Query: 523 ALNQMKEST--YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
++ +S + DT VL D+++E KE AL HSE+LAIAYGL+ ++ +RI+KNL
Sbjct: 485 EIHTRLKSAIGHSADTGDVLLDMEEEDKEHALPVHSEKLAIAYGLLHLDSKEAIRIVKNL 544
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH+ K++S++ GRE+IVRD RFHHF+DG+CSC D+W
Sbjct: 545 RVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 587
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G DA +F M R + SW+ M+ YA G +E L LF+QMR +G++P E T +++
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
SAC A+++ +H + ++ I + LV + KCG + A Q +
Sbjct: 222 SACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 280
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
A W + IHG + A+ L ++ + +P I
Sbjct: 281 LA--WNTIIAGMAIHGHV---KEAQRLFKEMKEAGVEPNDI 316
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 207/398 (52%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDL 312
Q G+ EA+ L + GV D E+ + +H Y S ++ +
Sbjct: 239 QHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNA 298
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I+MY KCGS+ DA VF+ + D+ + W+ MINGYA +G + L++F Q+R
Sbjct: 299 RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ 358
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL P + TF+ + +AC + ++E F+SM+ E+ I P EHY +V +LG+ G + E
Sbjct: 359 GLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEE 418
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV--------------DLDP 478
A + Q + P W +L R+H ++ L + +V ++
Sbjct: 419 AFHLV-QSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYA 477
Query: 479 SKADPKKIP-------TPPPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKALNQM-- 527
+ + +++ +K S ++ ++ EF + R DE L +M
Sbjct: 478 AVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNG 537
Query: 528 --KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
KE +VP T VLHD+D+ KE+AL HSE+LA+A+GLIST ++I+KNLR C D
Sbjct: 538 IVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACAD 597
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH +K++S+I GR+++ RD RFHHF DG C+CGDYW
Sbjct: 598 CHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
++ Y K G++ DAR +FD M + W+ MI+GY +G +E L+LF M + G+
Sbjct: 200 TAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 259
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+E + SA E +K+ + L+ + KCG L +A
Sbjct: 260 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVS 319
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGD 462
+ W A+ N +HGD
Sbjct: 320 VFNS--IGDKDIVVWNAMINGYAMHGD 344
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 207/398 (52%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDL 312
Q G+ EA+ L + GV D E+ + +H Y S ++ +
Sbjct: 238 QHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNA 297
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +I+MY KCGS+ DA VF+ + D+ + W+ MINGYA +G + L++F Q+R
Sbjct: 298 RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ 357
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL P + TF+ + +AC + ++E F+SM+ E+ I P EHY +V +LG+ G + E
Sbjct: 358 GLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEE 417
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV--------------DLDP 478
A + Q + P W +L R+H ++ L + +V ++
Sbjct: 418 AFHLV-QSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYA 476
Query: 479 SKADPKKIP-------TPPPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKALNQM-- 527
+ + +++ +K S ++ ++ EF + R DE L +M
Sbjct: 477 AVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNG 536
Query: 528 --KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
KE +VP T VLHD+D+ KE+AL HSE+LA+A+GLIST ++I+KNLR C D
Sbjct: 537 IVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACAD 596
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH +K++S+I GR+++ RD RFHHF DG C+CGDYW
Sbjct: 597 CHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
++ Y K G++ DAR +FD M + W+ MI+GY +G +E L+LF M + G+
Sbjct: 199 TAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 258
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+E + SA E +K+ + L+ + KCG L +A
Sbjct: 259 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVS 318
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGD 462
+ W A+ N +HGD
Sbjct: 319 VFNS--IGDKDIVVWNAMINGYAMHGD 343
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 217/393 (55%), Gaps = 28/393 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K E+M +GV + S F + C + + +++H ++ + D+ + N
Sbjct: 285 HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 344
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I MY +CG++ D +F ++ +++ SW+ +I G A +G G L F QM + ++P+
Sbjct: 345 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 404
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
E TF + SAC + ++ F+ +HY +V +LG+ G L EA++ I
Sbjct: 405 EITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELI 464
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-----------------SK 480
+ +P + + W L + +H +++ + A + ++DL+P
Sbjct: 465 -RNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRW 523
Query: 481 ADPKKIPTPPPKK-------RTAISILDGKSRLV--EFRNPTLYRDDEKLKALN-QMKES 530
+D +I ++ R+ I+I ++ + + +P+ R +KL+ L ++KE
Sbjct: 524 SDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKEL 583
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YVPD R+ LHD++ E KE L YHSERLAI +GLIST + + ++KNLRVCGDCH+AI
Sbjct: 584 GYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAI 643
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++++IV R++IVRD+ RFHHF DG+CSCGDYW
Sbjct: 644 KLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 258 QEGKVKEAI----ELMDKGV--KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G+ +EA+ ++M GV K +S + + C N ++H + + D
Sbjct: 178 QHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFD 237
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
++ +I Y C M D+ RVF ++ W ++ GY N ++ L++F +M +
Sbjct: 238 AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMR 297
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
G+ PN+ +F + ++C +A++ IH ++K + T+ ++G L+ + +CG
Sbjct: 298 EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK----LGLETDVFVGNSLIVMYYRCG 353
Query: 429 HL 430
+L
Sbjct: 354 NL 355
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 321 MYGKC--GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ--P 376
+YG C G + D R+F M R++ SW MI G +G +E L LF QM G++ P
Sbjct: 142 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 201
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
T+ V +AC +A A+ + IH K G S L+ C + ++ +
Sbjct: 202 TSSTYCCVITACANASALYQGVQIHAHVFK--LGYSFDAYISAALITFYANCKQMEDSLR 259
Query: 436 FIEQKLPFEPTAEFWEAL 453
KL W AL
Sbjct: 260 VFHGKLHMNVV--IWTAL 275
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 213/409 (52%), Gaps = 43/409 (10%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q G KEA+ E++ G + + C N + + +H Y +S I
Sbjct: 136 IAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEI 195
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVF--DHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + L +++MY KCG + A +VF ++ + W+ MI GYA +G E + LF
Sbjct: 196 KMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLF 255
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
EQM+ + PN+ TF+A+ +AC +EE +F+SM S +GI P EHY +V +LG+
Sbjct: 256 EQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGR 315
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA++ + +P P A W AL RIH DI+ +++ +LD
Sbjct: 316 SGLLKEAEETVFN-MPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVL 374
Query: 479 -------------SKADPKKIPTPPPKKRTAISILDGKSRLVEF----------RNPTLY 515
+KA +KI KK S ++ +F + L+
Sbjct: 375 LANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLF 434
Query: 516 RDDEKLKALNQMKESTYVPDTRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPL 574
D+ K +K + YVP+ VL DID +E KE AL HSE+LAIA+GLI+TP T +
Sbjct: 435 LDEMTTK----LKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAI 490
Query: 575 RIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RI+KNLRVC DCH A K +S++ RE+IVRD R+HHFKDG CSC DYW
Sbjct: 491 RIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 57/268 (21%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD--- 336
F +F+ CGN +++ + ++ + +L + N +I MY G + +ARRVFD
Sbjct: 35 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSL 94
Query: 337 ----------------------------HMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
M++R + SW +I GY G E L LF +
Sbjct: 95 DQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHE 154
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG-LVGVLGK 426
M + G PNE T + +AC + A+++ +IH KSE ++ E L L+ + K
Sbjct: 155 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN---ERLLASLLDMYAK 211
Query: 427 CGHL-FEAQQFIEQ---KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD 482
CG + F A+ F ++ KL P W A+ +HG + +DL +
Sbjct: 212 CGEIDFAAKVFHDEYGLKLKVWP----WNAMIGGYAMHGK-------SKEAIDL----FE 256
Query: 483 PKKIPTPPPKKRTAISILDGKS--RLVE 508
K+ P K T +++L+ S +LVE
Sbjct: 257 QMKVEKVSPNKVTFVALLNACSHGKLVE 284
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 193/353 (54%), Gaps = 30/353 (8%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGL 358
H Y + I + L++ +I MY KCG + A VFD++ RS+D+W+ M+ G+ NG
Sbjct: 233 HAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGY 292
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ L+LF +M L PN+ TF V +AC +EE +F+ M +GI P HY
Sbjct: 293 SERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYG 352
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL------------- 465
+V + + G +FE + I Q +P EP A +AL R H +++L
Sbjct: 353 CMVDLFCRAG-MFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAA 411
Query: 466 EDHAEELMVD----LDPSKADPKKIPTPPPK----KRTAISILDGKSRLVEF----RNPT 513
DHA +++ LD + K+ K S ++ + EF ++ +
Sbjct: 412 NDHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHS 471
Query: 514 LYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQE-AKEQALLYHSERLAIAYGLISTPA 570
RD K+ + Q+K S Y PDT VL DID E KE +L HSE+LAIA+GLIST
Sbjct: 472 RKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAP 531
Query: 571 RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP+R++ NLR+CGDCHNAIK++S+I GR +IVRD RFHHF+ G CSCGDYW
Sbjct: 532 GTPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRDANRFHHFRKGSCSCGDYW 584
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL--QLFEQMRKLGL 374
+++ Y CG + ARRVFD D M +W+ ++ GYA G GDE L F +M
Sbjct: 116 RLVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEG-GDEDLLRDFFARMP---- 170
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV---LGKCGHLF 431
+ ++ V S C +EA F M + P + +V LG H
Sbjct: 171 SRDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGL 230
Query: 432 EAQQFIEQK 440
A ++ +K
Sbjct: 231 WAHAYVFRK 239
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 217/393 (55%), Gaps = 28/393 (7%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
E +K E+M +GV + S F + C + + +++H ++ + D+ + N
Sbjct: 269 HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 328
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+I MY +CG++ D +F ++ +++ SW+ +I G A +G G L F QM + ++P+
Sbjct: 329 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 388
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
E TF + SAC + ++ F+ +HY +V +LG+ G L EA++ I
Sbjct: 389 EITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELI 448
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-----------------SK 480
+ +P + + W L + +H +++ + A + ++DL+P
Sbjct: 449 -RNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRW 507
Query: 481 ADPKKIPTPPPKK-------RTAISILDGKSRLV--EFRNPTLYRDDEKLKALN-QMKES 530
+D +I ++ R+ I+I ++ + + +P+ R +KL+ L ++KE
Sbjct: 508 SDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKEL 567
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
YVPD R+ LHD++ E KE L YHSERLAI +GLIST + + ++KNLRVCGDCH+AI
Sbjct: 568 GYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAI 627
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++++IV R++IVRD+ RFHHF DG+CSCGDYW
Sbjct: 628 KLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 258 QEGKVKEAI----ELMDKGV--KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G+ +EA+ ++M GV K +S + + C N ++H + + D
Sbjct: 162 QHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFD 221
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
++ +I Y C M D+ RVF ++ W ++ GY N ++ L++F +M +
Sbjct: 222 AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMR 281
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
G+ PN+ +F + ++C +A++ IH ++K + T+ ++G L+ + +CG
Sbjct: 282 EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK----LGLETDVFVGNSLIVMYYRCG 337
Query: 429 HL 430
+L
Sbjct: 338 NL 339
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 321 MYGKC--GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ--P 376
+YG C G + D R+F M R++ SW MI G +G +E L LF QM G++ P
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 185
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
T+ V +AC +A A+ + IH K G S L+ C + ++ +
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFK--LGYSFDAYISAALITFYANCKQMEDSLR 243
Query: 436 FIEQKLPFEPTAEFWEAL 453
KL W AL
Sbjct: 244 VFHGKLHMNVV--IWTAL 259
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 207/394 (52%), Gaps = 32/394 (8%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E + ++L +G++ + F +L + C N E+ ++H ++ + D +++ +
Sbjct: 361 EKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTL 420
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MYGKCG + ++FD + + +W+ ++ ++ +GLG ++ F M GL+PN
Sbjct: 421 VDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNA 480
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + C A +E+ +F SM+ +G+ P EHY ++ +LG+ G L EA+ FI
Sbjct: 481 VTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFI- 539
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAIS 498
+PFEP W + +IHGD++ A + ++ L+P + + + K
Sbjct: 540 NNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWE 599
Query: 499 --------ILDGKS------RLVEFRNPT---------------LYRDDEKLKALNQMKE 529
I DG V+ RN T +Y + L L+Q+K
Sbjct: 600 DVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNL--LDQIKR 657
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVP T VL D+D KE+ L YHSER+A+A+ L++ P P+ + KNLRVC DCH+A
Sbjct: 658 IGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSA 717
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+K +S++ R +IVRD RFHHF +G CSCGDYW
Sbjct: 718 LKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTL 283
+L++ + P D VL S+ D + G K+A+ +++ V D +
Sbjct: 226 ELSDACKAFEEMPCKDAVLWTSMID--GFVKNGDFKKALTAYMKMVTDDVFIDQHVLCST 283
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RS 342
C K K +H L+ + + N + +MY K G M A VF +D S
Sbjct: 284 LSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCIS 343
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
+ S +I+GY + ++ L F +R+ G++PNE TF ++ AC + +E +H
Sbjct: 344 IVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHG 403
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFE--AQQFIEQKLPFEPTAEFWEALRNYARI 459
+ +K F P LV + GKCG LF+ Q F E + P E W L
Sbjct: 404 QVVKFNFKRDPFVSS--TLVDMYGKCG-LFDHSIQLFDEIENPDEIA---WNTLVGVFSQ 457
Query: 460 HG 461
HG
Sbjct: 458 HG 459
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 22/191 (11%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H ++ + L+N + +Y KCG + ++FD M+ R+M SW +I G+A
Sbjct: 94 GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGT 414
N E L F QMR G + +V AC S AI+ +H +K F G
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGF----GC 209
Query: 415 EHYLG--LVGVLGKCGHLFEAQQFIEQKLP-------------FEPTAEFWEALRNYAR- 458
E ++G L + KCG L +A + E+ +P F +F +AL Y +
Sbjct: 210 ELFVGSNLTDMYSKCGELSDACKAFEE-MPCKDAVLWTSMIDGFVKNGDFKKALTAYMKM 268
Query: 459 IHGDIDLEDHA 469
+ D+ ++ H
Sbjct: 269 VTDDVFIDQHV 279
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + C + + +VH ++ +L + + + +MY KCG ++DA + F+ M +
Sbjct: 181 SVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK 240
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
W MI+G+ NG + L + +M + ++ + SAC + A
Sbjct: 241 DAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKA 292
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 223/398 (56%), Gaps = 38/398 (9%)
Query: 258 QEGKVKEAIELMDKGVKADAS--CFYTLFEL---CGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G+ EA++L + ++AD C + L C + + + K +H + L+ +
Sbjct: 286 QNGRAVEALDLF-RELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQC 343
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+L V++MY KCGS+ AR++F+ ++ R + W+ +I +G G + L LF+++ +
Sbjct: 344 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNET 403
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G++P+ TF ++ SA + +EE F+ M EFGI P +HY+ +V +L + G + E
Sbjct: 404 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEE 463
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------A 481
A + + EPT W L + + ++L + + +++L P A
Sbjct: 464 ANDMLAS-MQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYA 522
Query: 482 DPKK----------IPTPPPKKRTAISILDGK----SRLVEFRNPTLYRDDEKLKA-LN- 525
KK + KK S+++ K + ++E ++ +R+ K+ A LN
Sbjct: 523 AAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNS 582
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
+M++ YVP T +V HD+D++ Q L YHSERLAIA+GL++T T L IIKNLRVCGD
Sbjct: 583 EMRKLGYVPRTEFVYHDLDED---QLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGD 639
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH+AIK +S+IV RE++VRD KRFHHFKDG CSCGDYW
Sbjct: 640 CHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 12/215 (5%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A G+ EA+ + + GV D + + C + VH L+ +
Sbjct: 180 VAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCM 239
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R D+V ++ MY K G + A +VF M R+ +W +I+G+A NG E L LF +
Sbjct: 240 RMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRE 299
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGK 426
++ GLQP ++ AC S ++ IH F + E+ GT ++ + K
Sbjct: 300 LQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRLEWQCILGT----AVLDMYSK 355
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
CG L A++ KL W A+ HG
Sbjct: 356 CGSLESARKLF-NKLSSRDLV-LWNAIIACCGTHG 388
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+ + + ++ +Y +CG+M +A RVFD M + +W M+ G+ G E L ++ +MR
Sbjct: 141 DVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMR 200
Query: 371 KLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G+ +E + V AC S +A A +H ++ + T LV + K GH
Sbjct: 201 EHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTT--SLVSMYAKNGH 258
Query: 430 LFEAQQFIEQKLPFEPTAEFWEAL 453
L A Q + + +P+ W AL
Sbjct: 259 LDVACQ-VFRMMPYRNDVT-WSAL 280
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 209/378 (55%), Gaps = 27/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K ++ T+ C K++H Y +++ + D+ + + +++MY KCG + +R
Sbjct: 426 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 485
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD + +++ +W+++I Y +G G E + L M G++PNE TF++VF+AC +
Sbjct: 486 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 545
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
++E F MK ++G+ P ++HY +V +LG+ G + EA Q + A W +
Sbjct: 546 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 605
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPP 491
L +RIH ++++ + A + ++ L+P+ A + +
Sbjct: 606 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 665
Query: 492 KKRTAISILDGKSRLVEF-RNPTLYRDDEKLKA-----LNQMKESTYVPDTRYVLHDIDQ 545
+K S ++ + +F + + EKL +M++ YVPDT VLH++++
Sbjct: 666 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 725
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
+ KE L HSE+LAIA+G+++T T +R+ KNLRVC DCH A K +S+IV RE+I+RD
Sbjct: 726 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 785
Query: 606 NKRFHHFKDGKCSCGDYW 623
+RFH FK+G CSCGDYW
Sbjct: 786 VRRFHRFKNGTCSCGDYW 803
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-ST 307
L+ LCQ ++ EA+E ++ +GV+ D ++ C + + K++H Y L+ +
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 246
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + + + +++MY C + RRVFD M DR + W+ MI GY+ N E L LF
Sbjct: 247 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 306
Query: 368 QMRK-LGLQPNEQTFLAVFSACGSADA 393
M + GL N T V AC + A
Sbjct: 307 GMEESAGLLANSTTMAGVVPACVRSGA 333
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 263 KEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
KEA+ L G+ A+++ + C + + +H + ++ + D + N
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 358
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL----- 372
+++MY + G + A R+F M DR + +W+ MI GY + ++ L L +M+ L
Sbjct: 359 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418
Query: 373 ------GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGV 423
L+PN T + + +C + A+ + IH ++K+ ++ G+ LV +
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS----ALVDM 474
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD----IDL 465
KCG L +++ +Q +P + W + +HG+ IDL
Sbjct: 475 YAKCGCLQMSRKVFDQ-IP-QKNVITWNVIIMAYGMHGNGQEAIDL 518
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGN---PKWYENAKKVHDYFLQ 305
++ LC K + A+E ++D+ V+ + ++ C N P+ K+VH Y L+
Sbjct: 84 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 143
Query: 306 STIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+G+L + N ++ MYGK G + ++ + R + +W+ +++ N E L
Sbjct: 144 ---KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 200
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +M G++P+E T +V AC
Sbjct: 201 EYLREMVLEGVEPDEFTISSVLPAC 225
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGKCGSMTD 330
G+K D F L + + + E K++H + + D V + N ++ +Y KCG
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+VFD +++R+ SW+ +I+ + L+ F M ++P+ T ++V +AC
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 122
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 203/380 (53%), Gaps = 28/380 (7%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV D + ++ +C K++H + + D+ + N +IEMY KCGS+ +
Sbjct: 511 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 570
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ +VF M + + +W +I+ G G + ++ F +M G+ P+ F+A+ AC
Sbjct: 571 SFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 630
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ +EE +F MK ++ I P EHY +V +L + L +A+ FI +P +P + W
Sbjct: 631 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFI-LSMPLKPDSSIW 689
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTP 489
AL + R+ GD ++ + E +++L+P ++ K I
Sbjct: 690 GALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 749
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLYRD--DEKLKALNQ----MKESTYVPDTRYVLHDI 543
KK S ++ ++++ F T + + +E K L M + Y+ + ++VLHDI
Sbjct: 750 GLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 809
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D++ K L HSERLAIA+GL++T TPL+++KNLRVC DCH K +S+IV REL+V
Sbjct: 810 DEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLV 869
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFH FKDG CSCGDYW
Sbjct: 870 RDANRFHVFKDGACSCGDYW 889
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 256 LCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L G EA+ L + ++ D F ++ C +E AK +HD L D
Sbjct: 90 LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSD 149
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L + N +I+MY + + AR+VF+ M R + SW+ +I+GY NG +E L+++ + R
Sbjct: 150 LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRN 209
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
LG+ P+ T +V ACG ++EE I + + GI GL+ + K L
Sbjct: 210 LGVVPDSYTMSSVLRACGGLGSVEEGDI-IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 268
Query: 432 EAQQFIEQKL 441
+ ++ ++ +
Sbjct: 269 DGRRIFDKMV 278
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 260 GKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+E+ + GV D+ ++ CG E +H + I+ D+++N
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY K + D RR+FD M R SW+ MI GY+ GL +E ++LF +M +
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 313
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+ T ++ ACG +E ++H + S + + L+ + KCG+L +Q
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI--LINMYAKCGNLLASQ 371
Query: 435 Q 435
+
Sbjct: 372 E 372
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 244 QVLPPSVADLARLC---QEGKVKEAIELMDKGV---KADASCFYTLFELCGNPKWYENAK 297
VL +V+ +C Q G +E+I+L + V K D ++ + CG+ E K
Sbjct: 277 MVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGK 336
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VHDY + S D +N +I MY KCG++ ++ VF M + SW+ MIN Y NG
Sbjct: 337 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 396
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
DE ++LF+ M K ++P+ T++ + S
Sbjct: 397 SFDEAMKLFKMM-KTDVKPDSVTYVMLLS 424
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 8/209 (3%)
Query: 258 QEGKVKEAIEL---MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
Q G EA++L M VK D+ + L + K++H + ++V+
Sbjct: 394 QNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVV 453
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+N +++MY KCG M D+ +VF++M R + +W+ +I + + GL++ +MR G+
Sbjct: 454 SNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGV 513
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ T L++ C A + IH K G+ L+ + KCG L +
Sbjct: 514 TPDMATMLSILPVCSLLAAKRQGKEIHGCIFK--LGLESDVPVGNVLIEMYSKCGSLRNS 571
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGD 462
Q KL W AL + ++G+
Sbjct: 572 FQVF--KLMKTKDVVTWTALISACGMYGE 598
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADN 356
K+H + + ++ + K+I Y T + VF + ++ W+ +I N
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
GL E L L+ + +++ LQP+ TF +V +AC E A IH + F G++
Sbjct: 94 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGF----GSD 149
Query: 416 HYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
Y+G L+ + + L +A++ E+ +P W +L
Sbjct: 150 LYIGNALIDMYCRFNDLDKARKVFEE-MPLRDVVS-WNSL 187
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 213/406 (52%), Gaps = 45/406 (11%)
Query: 251 ADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A +A Q K +AIEL + G+ + ++ C + + K +H + +
Sbjct: 260 AMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRR 319
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ I L L N + +MY KCG + +A+ VF M +R + SW ++I G A G +E
Sbjct: 320 NKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNF 379
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F +M + GL+PN+ +F+ + +AC A +++ +F+ M +GI+P EHY +V +L
Sbjct: 380 FAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLS 439
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---- 481
+ G L +A+ I +P +P W AL RI+ D + + +++LD + +
Sbjct: 440 RAGRLDQAESLI-NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLV 498
Query: 482 -----------------------DPKKIPTPPPKKRTAISILDGKSRLVEF-----RNPT 513
D K + TP S ++ + + EF +P
Sbjct: 499 YLANVYASMGRLDDAASCRLRMRDNKSMKTP------GCSWIEINNSVYEFFMGDSSHPQ 552
Query: 514 LYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART 572
R ++ L +MK + Y P T V+H+ID+E KE AL HSE+LA+A+GLI+T T
Sbjct: 553 SLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGT 612
Query: 573 PLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 618
+RI+KNLRVC DCH+AIKI+S+IV RE++VRD RFHHFKDGKCS
Sbjct: 613 TIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 265 AIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
A +L D+ V D + TL + A+ V D ++ +LV + +I Y +
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEK----NLVSWSTMISGYAR 236
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLA 383
G++ +AR++F++M R++ SW+ MI GYA N + ++LF QM+ + GL PN+ T ++
Sbjct: 237 VGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVS 296
Query: 384 VFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
V SAC A++ +IH K E G+ G L + KCG + EA+
Sbjct: 297 VLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGN----ALADMYAKCGCVLEAK 346
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 40/187 (21%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F ++ + C +KVH + + +L + N ++++Y K G A+++F
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLF 185
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS----- 390
D M R + SW+ +I+GY +G+ D+ +F+ M + L + T ++ ++ G+
Sbjct: 186 DEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL-VSWSTMISGYARVGNLEEAR 244
Query: 391 ---------------------------ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
ADAIE F M+ E G++P + LV V
Sbjct: 245 QLFENMPMRNVVSWNAMIAGYAQNEKYADAIE----LFRQMQHEGGLAPND---VTLVSV 297
Query: 424 LGKCGHL 430
L C HL
Sbjct: 298 LSACAHL 304
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 204/359 (56%), Gaps = 36/359 (10%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H + ++S + + +I+MY KCG M ++ +FD + + +W+++I GY
Sbjct: 622 GKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGI 681
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G + ++LF+ M+ G +P+ TF+A+ +AC A + E + M+S FGI P E
Sbjct: 682 HGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLE 741
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G L EA + + + LP +P + W +L + R + D+D+ + +++
Sbjct: 742 HYACVVDMLGRAGRLNEALELVNE-LPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLE 800
Query: 476 LDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNPTL 514
L P KA+ +++ +K S ++ ++ F L
Sbjct: 801 LGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRF----L 856
Query: 515 YRDDEKLKALN----------QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
D+ L+++ ++ + Y PDT VLH+++++ K + L HSE+LAI++G
Sbjct: 857 VGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFG 916
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
L++T T LR+ KNLR+C DCHNAIK++S+I RE+IVRDNKRFHHFK+G CSCGDYW
Sbjct: 917 LLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G++ D +L C K K++H L++ D + ++ +Y +CG + A
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLA 556
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+ FD+M ++++ W+ MING++ N + L +F QM + P+E + + AC
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616
Query: 392 DAIEEAF-IHFESMKSEFGISPGTEHYL---GLVGVLGKCGHLFEAQQFIEQ-KLPFEPT 446
A+ +H ++KS TEH L+ + KCG + ++Q ++ L E T
Sbjct: 617 SALRLGKELHCFAVKSHL-----TEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT 671
Query: 447 AEFWEALRNYARIHG 461
W L IHG
Sbjct: 672 ---WNVLITGYGIHG 683
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGS 327
M+ VK + + +C + K++H Y L+ I+ D ++ N + Y KCGS
Sbjct: 392 MEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGS 451
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A VF M + + SW+ +I G+ NG + L L+ MR GL+P+ T ++ SA
Sbjct: 452 LHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSA 511
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
C ++ IH +++ F + + LV + +CG + A+ F +
Sbjct: 512 CARLKSLSCGKEIHGSMLRNGFELDEFI--CISLVSLYVQCGKILLAKLFFD 561
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ VH + L++ + D+ + N +I MYGK G + A +VFD M R++ SW+ ++ +
Sbjct: 215 GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLE 274
Query: 356 NGLGDEGLQLFEQMRK--LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
NG+ +E LF+ + GL P+ T + V C + + F + + G+
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMV-FHGLALKLGLCGE 333
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIE 438
+ L+ + KCG+L EA+ +
Sbjct: 334 LKVNSSLLDMYSKCGYLCEARVLFD 358
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D+G+ D + T+ LC H L+ + G+L +N+ +++MY KCG +
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ----PNEQTFLAVF 385
+AR +FD ++++ SW+ MI GY+ + + FE +RK+ ++ NE T L V
Sbjct: 352 EARVLFD-TNEKNVISWNSMIGGYSKD---RDFRGAFELLRKMQMEDKVKVNEVTLLNVL 407
Query: 386 SAC 388
C
Sbjct: 408 PVC 410
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L +LCG K E +K+H++ S + D+VL +++ MY C S D+ VF+ +
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSAC-GSADAIEEAFI 399
++ W+ +++GY N L + + +F +M L P+ T V AC G D +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 400 HFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLP 442
H ++K++ ++ ++G L+ + GK G + A + + K+P
Sbjct: 219 HGFALKTK----VLSDVFVGNALIAMYGKFGFVESAVKVFD-KMP 258
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 204/379 (53%), Gaps = 28/379 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G++ T+F C ++ H Y L+ + + + +I+MY K G++T +
Sbjct: 576 GIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+VF+ + ++S SW+ MI GY +G E ++LFE+M++ G P++ TFL V +AC +
Sbjct: 636 SKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHS 695
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+ E + + MKS FG+ P +HY ++ +LG+ G L A + + ++ EP W
Sbjct: 696 GLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALR-VAAEMSEEPDVGIWN 754
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPP 490
+L ++ RIH ++++ + + L+P K + +++
Sbjct: 755 SLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMS 814
Query: 491 PKKRTAISILDGKSRLVEFRNPTLYRDD-EKLKALNQMKEST-----YVPDTRYVLHDID 544
+K S ++ ++ F + D E++K+L + E Y PDT V HD+
Sbjct: 815 LRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLS 874
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
+E K + L HSE+LAI YGLI T T LR+ KNLR+C DCHNA K++S+++ RE++VR
Sbjct: 875 EEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVR 934
Query: 605 DNKRFHHFKDGKCSCGDYW 623
DNKRFHHF G CSCGDYW
Sbjct: 935 DNKRFHHFNKGFCSCGDYW 953
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ + G+ D +L C K K+VH + +++ + DL + V+ +Y C
Sbjct: 469 LQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 528
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + + +FD M D S+ SW+ +I G+ NG + L LF QM G+QP + + VF
Sbjct: 529 GELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVF 588
Query: 386 SAC 388
AC
Sbjct: 589 GAC 591
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VKAD +C + + K++H Y L+ D +L N + Y KCGS++ A+
Sbjct: 375 VKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQ 434
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVF + ++++SW+ +I GYA + L QM+ GL P+ T ++ SAC
Sbjct: 435 RVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLK 494
Query: 393 AIE-----EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ FI ++ + + YL ++ + CG L Q +
Sbjct: 495 SLRLGKEVHGFIIRNWLERDLFV------YLSVLSLYIHCGELCTVQVLFD 539
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L + G K E +K+H ST +R D VL ++I MY CGS D+R FD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACG 389
++ W+ +I+ Y+ N L E L++F +M K L P+ TF V AC
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACA 198
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D D + T+ +C + K VH + ++ ++ +LV+NN +++MY K G +
Sbjct: 269 DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCII 328
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG--LQPNEQTFLAVFSA 387
D++ +F ++++ SW+ M+ G++ G L QM ++ +E T L
Sbjct: 329 DSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPV 388
Query: 388 CGSADAI-EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
C + +H S+K EF + V KCG L AQ+
Sbjct: 389 CFDESVLPSLKELHCYSLKQEFVYDELLAN--AFVASYAKCGSLSYAQR 435
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
VH +++ + DL + N ++ YG G ++DA ++FD M +R++ SW+ MI ++DN
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN-- 266
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
GD+G P+ T + V C
Sbjct: 267 GDDG----------AFMPDVATVVTVLPVCA 287
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 218/406 (53%), Gaps = 37/406 (9%)
Query: 251 ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q G+ EA+ L G++ D+ + C N + + + VH + ++
Sbjct: 280 AMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR- 338
Query: 307 TIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
R D +L I+MY KCGS+ A+ +F+ ++DR + W+ MI +G G + L
Sbjct: 339 --RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALT 396
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
LF++M + G++P+ TF ++ SA + +EE + F M + F I+P +HY+ LV +L
Sbjct: 397 LFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLL 456
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
+ G + EA + + EPT W AL + + ++L + + +++L P
Sbjct: 457 ARSGLVEEASDLLTS-MKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVL 515
Query: 485 KIPT---PPPKKRTAISIL------DGKSRL-----VEFRNP--TLYRDDE--------- 519
+ + KK + + G ++ +E R +D+
Sbjct: 516 ALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIV 575
Query: 520 -KLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
K+ L+ +M++ Y+P T +V HD+++E KEQ L YHSE+LAIA+GL++T T L II
Sbjct: 576 SKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVII 635
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH+AIK +S+I RE++VRD KRFHHFKDG CSC DYW
Sbjct: 636 KNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ GVK D + + C + VH + L+ +R D+V +++MY K G +
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLD 261
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
A RVF M R+ SW MI+G+A NG DE L+LF M+ G+QP+ ++ AC
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACS 321
Query: 390 SADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ ++ +H F + +F GT + + KCG L AQ + +
Sbjct: 322 NIGFLKLGRSVHGFIVRRFDFNCILGT----AAIDMYSKCGSLASAQMLFN--MISDRDL 375
Query: 448 EFWEALRNYARIHG 461
W A+ HG
Sbjct: 376 ILWNAMIACCGAHG 389
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D++ F C + V D + + D+ + + ++ +Y + G+M DA +VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
D M R +W M+ G+ G + +Q++ +MR+ G++ +E + V AC +A
Sbjct: 167 DRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 208/380 (54%), Gaps = 34/380 (8%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+A+ S ++ C + + + VH + L++ ++++ +IEMY KCGS+
Sbjct: 230 RAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMC 289
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+F MA ++ S+ +MI+G A +G G EGL++F +M + GL+P++ ++ V +AC A
Sbjct: 290 LFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGL 349
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
++E F MK E GI P +HY +V ++G+ G + EA + I + +P EP W +L
Sbjct: 350 VQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELI-KSMPMEPNDVLWRSL 408
Query: 454 RNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTPPPKK--- 493
+ +++H ++ + A + + LD KA D K T K
Sbjct: 409 LSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLS 468
Query: 494 -RTAISILDGKSRLVEF--------RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
R S+++ K ++ F ++ ++Y E L + Q+K Y PDT VL D+
Sbjct: 469 QRPGFSLVEVKRKMHRFVSQDAGHPQSESVY---EMLYQMEWQLKFEGYSPDTTQVLCDV 525
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D+E K+Q L HS++LAIAY LI T +P+RI++NLR+C DCH K++S I RE+ V
Sbjct: 526 DEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITV 585
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHFKDG CSC DYW
Sbjct: 586 RDRHRFHHFKDGACSCRDYW 605
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ ++GVK D + TL + C E +VH + L+ + D+ + N +I MYGKCG
Sbjct: 121 EMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCG 180
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL-AVF 385
+ VF+ M +RS+ SW +I +A G+ + L+L M G E++ L +V
Sbjct: 181 EIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVL 240
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
SAC A++ +H +++ G++ E L+ + KCG L++ ++
Sbjct: 241 SACTHLGALDLGRSVHGFLLRNVSGLNVIVE--TSLIEMYLKCGSLYKGMCLFQK 293
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM--YGKCGSMTDARRVFDHMA 339
+L + C N E K+ H L+ + GD + ++ GSM A +F M
Sbjct: 36 SLLKKCSN---MEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMD 92
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+ ++ M+ G+ + +E L +++M + G++P+ T+ + AC A+EE
Sbjct: 93 ELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQ 152
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+H +K G+ L+ + GKCG + EQ E + W AL
Sbjct: 153 VHAHILK--LGLENDVFVQNSLISMYGKCGEIGVCCAVFEQM--NERSVASWSAL 203
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 202/378 (53%), Gaps = 28/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K + L C N H Y L++ ++ + + +++MY KCG + A
Sbjct: 215 IKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLAC 274
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
++FD ++DR ++ MI G+A +G G++ L+L+ M+ L P+ T + AC
Sbjct: 275 QLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGG 334
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+EE FESMK G+ P EHY L+ +LG+ G L EA++ + Q +P +P A W +
Sbjct: 335 LVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERL-QDMPMKPNAILWRS 393
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTPPPK--- 492
L A++HG++++ + A + +++L+P + D K++
Sbjct: 394 LLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGV 453
Query: 493 -KRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQ 545
K S+++ + EF +P K+ +N+ + E + P T VL D+++
Sbjct: 454 DKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEE 513
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
E KE L YHSERLAIA+ LI++ + P+RIIKNLRVCGDCH K++S R++IVRD
Sbjct: 514 EDKEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRD 573
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHFKDG CSC DYW
Sbjct: 574 RNRFHHFKDGSCSCLDYW 591
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDY---FLQSTIRGDLVLNNKVIEMYGK 324
L K ++ ++ F +LF+ C + W ++ +H + FLQ D + N ++ Y K
Sbjct: 95 LTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPY--DPFVQNSLLNFYAK 152
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYA-------------DNGLGDEGLQLFEQMRK 371
G + +R +FD +++ + +W+ M+ YA D + E L LF M+
Sbjct: 153 YGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQL 212
Query: 372 LGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGIS--PGTEHYLGLVGVLGKCG 428
++PNE T +A+ SAC + A+ + A+ H +++ ++ GT LV + KCG
Sbjct: 213 SQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGT----ALVDMYSKCG 268
Query: 429 HLFEAQQFIEQ 439
L A Q ++
Sbjct: 269 CLNLACQLFDE 279
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 197/355 (55%), Gaps = 29/355 (8%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ +H ++S I ++ + + +++MYGKCG + DA ++F R++ +W+ MI GYA
Sbjct: 341 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 400
Query: 357 GLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
G L +F+ M + G PN T + V ++C ++ + FE+M+ FGI P TE
Sbjct: 401 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 460
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G +A + I Q +P P+ W AL ++HG +L A E + +
Sbjct: 461 HYACVVDLLGRAGMEEQAYEVI-QGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 519
Query: 476 LDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNP-- 512
LDP + K++ KK S + K+ + FR
Sbjct: 520 LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDT 579
Query: 513 --TLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+Y + + L K QM+ + Y+PDT+Y L+D+++E KE + HSE+LA+A+GLI
Sbjct: 580 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 639
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P P+RI+KNLR+C DCH A K +S IVGRE+IVRDN RFHHFK +CSCGDYW
Sbjct: 640 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
F C + ++ H + ++ D+ + N +++ YGKC AR VFD M R
Sbjct: 225 AFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR 284
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW M+ YA NG +E + R+ G +P + + + C + +H
Sbjct: 285 NSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALH 344
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+++S I LV + GKCG + +A+Q
Sbjct: 345 AVAVRS--CIDANIFVASALVDMYGKCGCVEDAEQIF 379
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D ++ ++MY K G + AR +F M +R++ +W+ ++ +G E ++ + +R
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 212
Query: 371 KLGLQPNEQTFLAVFSACGSA 391
+ G PN + A F+AC A
Sbjct: 213 EAGGLPNVVSACAFFNACAGA 233
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 200/381 (52%), Gaps = 32/381 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D + L C + A+ +H Y + D+++ ++ +Y K G + +
Sbjct: 317 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 376
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+F+ + DR +W M+ GYA + G E ++LF+ M K G++ + TF + SAC +
Sbjct: 377 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 436
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+EE +FE M + + P +HY +V +LG+ G L +A + I + +P EP++ W
Sbjct: 437 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELI-KSMPMEPSSGVWG 495
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTPPPKKR 494
AL R++G+++L E ++ LDPS D K+ ++R
Sbjct: 496 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERR 555
Query: 495 T----AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHD 542
S ++ +++ F R+ ++ E+L + +++E+ P T +VLHD
Sbjct: 556 LTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEEL--IRKIREAGCAPKTEFVLHD 613
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
ID+E K + HSE+LAIA+GL+ T + PL I KNLR+CGDCH+ K S + R +I
Sbjct: 614 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 673
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD+KRFHHF DG CSC DYW
Sbjct: 674 IRDSKRFHHFADGLCSCRDYW 694
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++S D + ++++ MY K G DA+R+FD M ++ + SW+ +++G + G
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200
Query: 359 GDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
L F +MR + G QPNE T L+V SAC A++E + + G+S +
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG-KSLHGVVVKLGMSGKAKVV 259
Query: 418 LGLVGVLGKCGHLFEAQQFIEQ 439
L+ + GK G L A Q E+
Sbjct: 260 NSLINMYGKLGFLDAASQLFEE 281
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++ C + + K +H ++ + G + N +I MYGK G + A ++F+ M
Sbjct: 224 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 283
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS------ADA 393
RS+ SW+ M+ + NG ++G+ LF M++ G+ P++ T +A+ AC A++
Sbjct: 284 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 343
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
I A+IH ++ I+ + +G L +FE
Sbjct: 344 I-HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 381
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 205/385 (53%), Gaps = 33/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ +GV+ D + + +LF + +H + L++ + +++ ++ MYGKCGS
Sbjct: 391 MIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGS 450
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M DA +VF + ++ W MI + +G +E ++LFE+M G+ P TF++V SA
Sbjct: 451 MLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSA 510
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C I++ F +F SM + I PG EHY +V +LG+ G L EA +FIE +PFEP +
Sbjct: 511 CSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIES-MPFEPDS 569
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------------SKADPKK--I 486
W AL H ++++ E + L+P +AD + +
Sbjct: 570 LVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLM 629
Query: 487 PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRY 538
+K + S +D K+R F R +Y +KLK L +K YV +T++
Sbjct: 630 GINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKEL--IKRRGYVAETQF 687
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
+ ++ ++EQ+L HSE+LA+A+GL+ P +P+RI KNLR CGDCH +K S I
Sbjct: 688 ATNSVEG-SEEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQ 746
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFH F +G CSC DYW
Sbjct: 747 REIIVRDINRFHRFTNGSCSCMDYW 771
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C + K+VH ++ + G + + N +++MY KCG DA ++F DR
Sbjct: 304 SVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDR 363
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ +W++MI G ++ F+ M + G++P+E ++ ++F A S A+ + IH
Sbjct: 364 DVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIH 423
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA-QQFIEQKLPFEPTAEFWEALRNYARI 459
+K+ G + LV + GKCG + +A Q F E K E W A+
Sbjct: 424 SHVLKT--GHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK---EHNVVCWTAMITVFHQ 478
Query: 460 HG 461
HG
Sbjct: 479 HG 480
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ + F + C + +++H + D + +++MY KCGSM A
Sbjct: 195 GIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLA 254
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
VFD M R++ SW+ MI G+ N L + +F ++ LG P++ + +V SAC A
Sbjct: 255 ENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSAC--A 310
Query: 392 DAIEEAF---IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+E F +H +K G+ LV + KCG LFE
Sbjct: 311 GLVELDFGKQVHGSIVKR--GLVGLVYVKNSLVDMYCKCG-LFE 351
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 291 KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHL 348
K ++A ++H + + L N ++ +Y KCGS+ +F+ S + +W
Sbjct: 111 KSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTT 170
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE-----AFIHFES 403
+IN + + + L F +MR G+ PN TF A+ AC A + E A IH
Sbjct: 171 LINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHC 230
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++ ++ L+ + KCG + A+ ++
Sbjct: 231 FLNDPFVAT------ALLDMYAKCGSMLLAENVFDE 260
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 200/381 (52%), Gaps = 28/381 (7%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D V+ + S ++ C N ++VH + ++ + + + ++ MY KCG +
Sbjct: 226 DAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLD 285
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
DA ++FD M + + +W+ MI+GYA +G G + ++LFE+M+ G+ P+ T LAV +AC
Sbjct: 286 DACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACI 345
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ FE+M+ + I P +HY +V +L + G L A I +PFEP
Sbjct: 346 HTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMI-HSMPFEPHPSA 404
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPT 488
+ L R++ +++ + A +++ DP A + +
Sbjct: 405 YGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKD 464
Query: 489 PPPKKRTAISILDGKSRLVEFRN-----PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHD 542
K S ++ K EFR+ P L +KL L + MK Y PD + LHD
Sbjct: 465 NAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHD 524
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
+++ K Q L+ HSE+LAIA+GLIST LRI KNLR+CGDCHNA K++S+I RE+I
Sbjct: 525 VEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREII 584
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD RFHHF+ G CSCGDYW
Sbjct: 585 LRDTTRFHHFRGGHCSCGDYW 605
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D +L ++ Y G++ A F M R++ SW+ ++ GY N + L++F+
Sbjct: 163 KTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKT 222
Query: 369 MRKLGL-QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGVL 424
M + + QPN T +V C + A+ +H MK G I+ GT L+ +
Sbjct: 223 MVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTS----LLSMY 278
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
KCG L +A + ++ + A W A+ + HG
Sbjct: 279 CKCGDLDDACKLFDEMHTKDIVA--WNAMISGYAQHG 313
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 279 CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
C + P +A+++ D S D V N ++ + CG + A RVF M
Sbjct: 43 CLLAGYAKASGPGRLADARRLFD----SIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTM 98
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
R + SW+ M++G + NG +E +F M
Sbjct: 99 PVRDVTSWNTMVSGLSKNGAIEEAEAMFRAM 129
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 210/399 (52%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA + K V+ DA+ +L C + ++ + H + + +
Sbjct: 418 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 477
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + +R+VF+ M R + SW+ MI GY +GLG E LF +M LG
Sbjct: 478 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TF+ + SAC + + E F M+ +G++P EHY+ +V +L + G L EA
Sbjct: 538 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEA 597
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
+FI Q +P W AL R++ +IDL ++ +L P
Sbjct: 598 YEFI-QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 656
Query: 480 ------KADPKKI-PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
A+ + I KK S ++ L F ++P +YR+ + + L
Sbjct: 657 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNI--L 714
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+K+ Y PDT +VL D+++E KE+AL+ HSE+LAIAYG++S + + KNLRVCG
Sbjct: 715 VGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCG 774
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH IK +S + R +IVRD RFHHFK+G+CSCGD+W
Sbjct: 775 DCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 12/216 (5%)
Query: 268 LMDKGVKADASCFYT------LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
L+ K + A CF + C + +++H +S + DL N ++ M
Sbjct: 325 LLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSM 384
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y K G + A +FD MA + S+ +++GY NG +E +F++M+ ++P+ T
Sbjct: 385 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 444
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+++ AC A++ S+ G++ T L+ + KCG + ++Q + +
Sbjct: 445 VSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMM 502
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
P + + Y IHG L A L ++++
Sbjct: 503 PSRDIVSWNTMIAGYG-IHG---LGKEATALFLEMN 534
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ C + + +H + + + ++ DL ++ +++MY KC + DA +F M R +
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 344 DSWHLMINGYADNGLGDEGLQ--LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IH 400
+W+ M+ GYA +G+ + L QM+ L+PN T +A+ A+ + +H
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 401 FESMK--------SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ S+ ++ G L+ + KCG L A++ +
Sbjct: 252 AYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 297
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD----------LVLNNKVIEMY 322
++ +AS L L VH Y +++ + + ++L +++MY
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMY 283
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
KCGS+ ARRVFD M R+ +W +I G+ + LF+ M GL T +
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343
Query: 383 A-VFSACGSAD 392
A AC S D
Sbjct: 344 ASALRACASLD 354
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 189/372 (50%), Gaps = 28/372 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
TL C K++H Y ++ + D+ + + +++MY KCG + +R VFD +
Sbjct: 498 LMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP 557
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF 398
R++ +W+++I Y +GLGDE + LF++M +PNE TF+A +AC + ++
Sbjct: 558 KRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGM 617
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
F SMK G+ P + + V +LG+ G L EA I P E W + R
Sbjct: 618 ELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACR 677
Query: 459 IHGDIDLEDHAEELMVDLDPSKAD--------------------------PKKIPTPPPK 492
+H ++ L + A E + L+P +A + + P
Sbjct: 678 LHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGC 737
Query: 493 KRTAISILDGKSRLVEFRNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQA 551
+ + + E +P + AL +M+ Y PDT VLHDI++ K
Sbjct: 738 SWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAI 797
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
L YHSE+LAIA+GL+ TP +R+ KNLRVC DCH A K +SR+VGRE+++RD +RFHH
Sbjct: 798 LRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHH 857
Query: 612 FKDGKCSCGDYW 623
F DG CSCGDYW
Sbjct: 858 FVDGACSCGDYW 869
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYEN 295
P G V ++ L L Q G+ EAIE ++ +GV+ D F + C +
Sbjct: 232 PGGGVVTWNTMVSL--LVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSL 289
Query: 296 AKKVHDYFLQ-STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMING 352
+++H Y L+ S + + + + +++MY + ARRVFD + R + W+ M+ G
Sbjct: 290 GREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCG 349
Query: 353 YADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSAD 392
YA G+ +E L+LF +M + G+ P+E T V AC ++
Sbjct: 350 YAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSE 390
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 32/251 (12%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFELCGNPK 291
+ P G + L A + Q G +EA+EL + GV + + C +
Sbjct: 331 DMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSE 390
Query: 292 WYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMIN 351
+ + VH Y L+ + + + N ++++Y + G M AR +F + R + SW+ +I
Sbjct: 391 TFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT 450
Query: 352 GYADNGLGDEGLQLFEQMRKLG------------------LQPNEQTFLAVFSACGSADA 393
G G + QL +M++ G + PN T + + C A
Sbjct: 451 GCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAA 510
Query: 394 -IEEAFIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ IH +M+ I+ G+ LV + KCG L ++ + +LP + W
Sbjct: 511 PAKGKEIHGYAMRHALDSDIAVGS----ALVDMYAKCGCLALSRAVFD-RLP-KRNVITW 564
Query: 451 EALRNYARIHG 461
L +HG
Sbjct: 565 NVLIMAYGMHG 575
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 219/414 (52%), Gaps = 39/414 (9%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
D VL S+ LA Q G E+I E+ GV+ + T+ + ++
Sbjct: 213 DAVLWNSM--LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGRE 270
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + + + + +I+MY KCGS+ A +F+ + ++ + SW+ +I GYA +GL
Sbjct: 271 IHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGL 330
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
L LF++MRK +P+ TF+ V +AC ++E + M ++GI+P +HY
Sbjct: 331 AVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYT 389
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
++ +LG CG L EA I + + +P + W AL N +IHG+++L + A E +++L+P
Sbjct: 390 CMIDLLGHCGQLDEAYDLI-RNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEP 448
Query: 479 SKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF-------- 509
+ I KK A S ++ K+++ F
Sbjct: 449 DDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHS 508
Query: 510 RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
+ +Y + ++L+ L M E+ Y PDT V HD++++ K + HSERLAIA+GLIST
Sbjct: 509 NSDAIYAELKRLEGL--MHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTS 566
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T L I KNLR+C DCH AIK +S+I+ RE+ VRD R+H FK G CSCGD+W
Sbjct: 567 PGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++D G++ D + + C + +H+Y ++S DL + +I+MY KCG
Sbjct: 138 KMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCG 197
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA RVFD + R W+ M+ YA NG DE + L +M G++P E T + V S
Sbjct: 198 CVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVIS 257
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEH----YLGLVGVLGKCGHLFEAQQFIEQKLP 442
+ SAD A + + FG G + L+ + KCG + A E+
Sbjct: 258 S--SADV---ACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR- 311
Query: 443 FEPTAEFWEALRNYARIHG 461
E W A+ +HG
Sbjct: 312 -EKRVVSWNAIITGYAMHG 329
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ +L + C + K K++H F I + L K++ +Y S+ +AR +FD +
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
+++ W+++I GYA NG D + L+ +M GL+P+ T V AC + AI E
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 399 IHFESMKSEFGISPGTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
IH E+ I G E L L+ + KCG + +A + ++ + + A W ++
Sbjct: 170 IH------EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRD--AVLWNSM 220
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 209/378 (55%), Gaps = 27/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K ++ T+ C K++H Y +++ + D+ + + +++MY KCG + +R
Sbjct: 509 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 568
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD + R++ +W++++ Y +G + + + M G++PNE TF++VF+AC +
Sbjct: 569 KVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSG 628
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ E F +MK ++G+ P ++HY +V +LG+ G + EA Q I A W +
Sbjct: 629 MVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSS 688
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPP 491
L RIH ++++ + A + ++ L+P+ A + +
Sbjct: 689 LLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGV 748
Query: 492 KKRTAISILDGKSRLVEF-RNPTLYRDDEKLKA-----LNQMKESTYVPDTRYVLHDIDQ 545
+K S ++ + +F + + EKL+ +M++ Y+PDT VLH++++
Sbjct: 749 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEE 808
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
+ KE L HSE+LAIA+G+++T T +R+ KNLRVC DCH A K +S++V RE+I+RD
Sbjct: 809 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRD 868
Query: 606 NKRFHHFKDGKCSCGDYW 623
+RFHHFK+G CSCGDYW
Sbjct: 869 VRRFHHFKNGTCSCGDYW 886
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ-ST 307
L+ LCQ + EA+E ++ +GV+ D ++ C + + K++H Y L+ +
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGS 329
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ + + + +++MY C + RVFD M DR + W+ MI GYA N +E L LF
Sbjct: 330 LDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFI 389
Query: 368 QMRK-LGLQPNEQTFLAVFSACGSADAIEE 396
+M + GL N T V AC + A +
Sbjct: 390 EMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ A+++ + C + + +H + ++ + D + N +++MY + G + A
Sbjct: 396 GLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIA 455
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-----------KLGLQPNEQT 380
+R+F M DR + +W+ +I GY + ++ L + +M+ ++ L+PN T
Sbjct: 456 KRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSIT 515
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ + +C + A+ + IH ++K+ ++ G+ LV + KCG L +++
Sbjct: 516 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS----ALVDMYAKCGCLQMSRKVF 571
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDI-DLEDHAEELMV 474
+Q +P W + +HG+ D D +MV
Sbjct: 572 DQ-IPIRNVIT-WNVIVMAYGMHGNSQDAIDMLRMMMV 607
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGN---PKWYENAKKVHDYFLQ 305
++ LC K + A+E ++D+ V+ + ++ C N P+ K+VH Y L+
Sbjct: 167 ISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR 226
Query: 306 STIRGDL--VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
+G+L + N ++ MYGK G + ++ + R + +W+ +++ N E L
Sbjct: 227 ---KGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEAL 283
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSAC 388
+ +M G++P+ T +V AC
Sbjct: 284 EYLREMVLEGVEPDGFTISSVLPAC 308
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV-LNNKVIEMYGK 324
I+++ G+K D F L + + + + K++H + + D V + N ++ +Y K
Sbjct: 82 IDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRK 141
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CG +VFD +++R+ SW+ +I+ + L+ F M ++P+ T ++V
Sbjct: 142 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSV 201
Query: 385 FSAC 388
AC
Sbjct: 202 ALAC 205
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 211/400 (52%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELM------DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G+ EA+EL D V +A C +++H Y L++
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513
Query: 312 -LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L + N +I+MY K G + AR VFD+M R+ SW ++ GY +G G+E LQ+F +M+
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
K+GL P+ TF+ V AC + +++ +F M +FG+ PG EHY +V +L + G L
Sbjct: 574 KVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---------- 480
EA + I + +P +PT W AL + R++ +++L ++A +++L+
Sbjct: 634 DEAMELI-RGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNI 692
Query: 481 -------ADPKKI----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL 524
D +I KKR S + G+ F +P + + L+ L
Sbjct: 693 YANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDL 752
Query: 525 NQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
Q +K YVPD R+ LHD+D E K L HSE+LA+AYG+++T P+RI KNLR C
Sbjct: 753 MQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRAC 812
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH+A +S I+ E+IVRD+ RFHHFK+G CSC YW
Sbjct: 813 GDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 232 VPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFEL 286
V + M + GD V S+ +A Q G A+++ D G++ DA +
Sbjct: 183 VFDEMRERGVGDLVSWNSI--VAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 240
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + K+VH Y L+S + D+ + N V++MY KCG M +A +VF+ M + + SW
Sbjct: 241 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 300
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ M+ GY+ G D+ L LFE++R+ ++ N T+ AV + EA F M+
Sbjct: 301 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMR- 359
Query: 407 EFGISPGTEHYLGLVGVLGKCG 428
+ + + LV +L C
Sbjct: 360 ---LCGSEPNVVTLVSLLSGCA 378
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G + D F + + CG + VH S ++ + N ++ MYG+CG+ +A
Sbjct: 121 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENA 180
Query: 332 RRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMRK-LGLQPNEQTFLAVFSA 387
R+VFD M +R + SW+ ++ Y G +++FE+M + LG++P+ + + V A
Sbjct: 181 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 240
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C S A +H +++S G+ +V + KCG + EA + E+
Sbjct: 241 CASVGAWSRGKQVHGYALRS--GLFEDVFVGNAVVDMYAKCGMMEEANKVFER 291
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DL++ N +I+MY KC S AR +FD + DRS+ +W ++I G A +G +E L+LF Q
Sbjct: 408 DLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQ 467
Query: 369 MRKLG--LQPNEQTFLAVFSACGSADAI 394
M + + PN T AC A+
Sbjct: 468 MLQPDNFVMPNAFTISCALMACARLGAL 495
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD--HMA 339
TLF C K +A+ +H L + D +I MY S A V H +
Sbjct: 34 TLFHQC---KSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPS 87
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-EAF 398
++ W+ +I G ++ LQL+ +M++LG +P+ TF V ACG + A
Sbjct: 88 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 147
Query: 399 IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+H S E+ + G GLV + G+CG A+Q ++
Sbjct: 148 VHAVVFASGFEWNVFVGN----GLVSMYGRCGAWENARQVFDE 186
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 223/406 (54%), Gaps = 34/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G +EA+E+ + G++ + + +L ++ K+ H + L+
Sbjct: 223 AIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 282
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ VL N +I+MY KCG+++ A+R+FD+M +R+ SW+ M+ GY+ +GLG E L+LF
Sbjct: 283 ELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 342
Query: 367 EQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS-EFGISPGTEHYLGLVGVL 424
MR + ++P+ T LAV S C + ++ M + E+GI P TEHY +V +L
Sbjct: 343 RLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDML 402
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPK 484
G+ G + EA +FI +++P +PTA +L R+H +D+ ++ +++++P A
Sbjct: 403 GRAGRIDEAFEFI-KRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNY 461
Query: 485 KIPT---------------PPPKKRTAISILDGKSRL--------VEFRNPTLYRDDEKL 521
I + + A++ G+S + + T R +E L
Sbjct: 462 VILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVL 521
Query: 522 KALNQ----MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ + MK++ YVPD VL+D+D+E KE+ LL HSE+LA+ +GLI+T P+R+
Sbjct: 522 AKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVF 581
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCHN KI S++ RE+ +RD RFH G CSCGDYW
Sbjct: 582 KNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 9/214 (4%)
Query: 253 LARLCQEGKVKEAI-ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
+++LC G+++EA+ E++ G + C+ L C + + ++VH + +++
Sbjct: 26 ISQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPA 85
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L +++ YGKC + DAR+V D M ++++ SW MI+ Y+ G E L +F +M +
Sbjct: 86 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMR 145
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFG--ISPGTEHYLGLVGVLGKCG 428
+PNE TF V ++C A + IH +K + I G+ L+ + K G
Sbjct: 146 SDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSS----LLDMYAKAG 201
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
+ EA++ E LP + YA++ D
Sbjct: 202 QIEEAREIFEC-LPERDVVSCTAIIAGYAQLGLD 234
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 19/259 (7%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++R Q G EA+ + + +++D F T+ C K++H ++
Sbjct: 122 AMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKW 181
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + +++MY K G + +AR +F+ + +R + S +I GYA GL +E L++F
Sbjct: 182 NYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 241
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLG 425
++++ G++PN T+ ++ +A ++ H ++ E ++ L+ +
Sbjct: 242 QRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYS 299
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKK 485
KCG+L AQ+ + +P E TA W A+ HG +++L D K+
Sbjct: 300 KCGNLSYAQRLFDN-MP-ERTAISWNAMLVGYSKHG-------LGREVLELFRLMRDEKR 350
Query: 486 IPTPPPKKRTAISILDGKS 504
+ P T +++L G S
Sbjct: 351 V---KPDAVTLLAVLSGCS 366
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 204/354 (57%), Gaps = 28/354 (7%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K++H + L++ + D L++ +I+MY KCGS+ DAR FD + + SW +MI GYA N
Sbjct: 497 KEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVN 556
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G G E + L+++M + G++P+ T+L + ACG A +E+ F+ M++ I EH
Sbjct: 557 GRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEH 616
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y ++G+L + G +A +E +P EP A+ ++ + +HG+++L + +++L
Sbjct: 617 YACVIGMLSRAGRFADAVALMEV-MPEEPDAKILSSVLSACHMHGEVELGKKVADKLLEL 675
Query: 477 DPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEFRN---- 511
+P KA+ K + K S +D ++ F
Sbjct: 676 EPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENS 735
Query: 512 -PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
P +++ + +L + ++ + Y PDT +LH++++E K +AL +HSE+ AIA+GL+ T
Sbjct: 736 LPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTA 795
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
T +R+ KN+R+C DCHNA K++S++ RE++VRD KRFHHF+DG CSCGDYW
Sbjct: 796 GPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 263 KEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
++ +E + D + T+ +C W E + VH ++S ++N +++MY
Sbjct: 151 RDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMY 210
Query: 323 GKCGSMTDARRVFDHM---ADRSMDSWHLMINGYADNGLGDEGLQLFE--QMRKLGLQPN 377
KCG M DA F A R++ SW++M+ GYA NG L QM + G+ +
Sbjct: 211 AKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPAD 270
Query: 378 EQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
E T L+V C + + AF+ + + P L+ G+CG L
Sbjct: 271 EITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNA-----LIAAYGRCGCLLH 325
Query: 433 AQQFIE 438
A + +
Sbjct: 326 ACRVFD 331
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF-EQ 368
GD + N ++ MYG+CG + DA +VF+ MA R++ SW+ ++ AD GL+LF +
Sbjct: 97 GDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADP---RRGLELFRDC 153
Query: 369 MRKLG--LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
+ LG P+E T + V C + E +H ++KS + +P + LV +
Sbjct: 154 LEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV--LVDMYA 211
Query: 426 KCGHLFEAQ-QFIE 438
KCG + +A+ F+E
Sbjct: 212 KCGEMADAECAFLE 225
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR--GDLVLNNK 317
G ++E +++ ++GV AD ++ +C +++H + ++ + GD+V N
Sbjct: 255 GLLRE-MQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMV-PNA 312
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQP 376
+I YG+CG + A RVFD + + + SW+ +I +A NG ++LF +M G +P
Sbjct: 313 LIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKP 372
Query: 377 NEQTFLAVFSACG 389
+ + ++ ACG
Sbjct: 373 DWFSIGSLLLACG 385
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 224/443 (50%), Gaps = 37/443 (8%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMD 270
S+ ++ + + + + P+ D V A + Q G+ KEA+E + D
Sbjct: 211 SWTELIVAYAKYGDMESASGLFDDLPSKDMV--AWTAMVTGYAQNGRPKEALEYFQKMQD 268
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI--RGDLVLNNKVIEMYGKCGSM 328
G++ D + C ++A + D +S G++V+ + +I+MY KCGS
Sbjct: 269 VGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSP 328
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+A +VF+ M +R++ S+ MI GYA +G LQLF M K ++PN+ TF+ + SAC
Sbjct: 329 DEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSAC 388
Query: 389 GSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAE 448
A +E+ F M+ FG++P +HY +V +LG+ G L EA + + +P EP
Sbjct: 389 SHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV-KTMPMEPNGG 447
Query: 449 FWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD---------------------PKKIP 487
W AL RIHG+ D+ A + L+P+ K I
Sbjct: 448 VWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIR 507
Query: 488 TPPPKKRTAISILDGKSRLVE--FRNPTLY-RDDEKLKALNQMKEST----YVPDTRYVL 540
KK S +GK+ + F T + R E +AL Q+ E Y P+
Sbjct: 508 EKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAP 567
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
+D+ + KE+ L+ HSE+LA+AYGL+ T A ++I+KN+R+C DCHN + S I GRE
Sbjct: 568 YDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGRE 627
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+IVRDN RFHHF +G CSCG++W
Sbjct: 628 IIVRDNMRFHHFHNGTCSCGNFW 650
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 33/200 (16%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVH-DYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
GV + F LF+ CG + K+VH L DL + N +I++Y KCG +
Sbjct: 137 GVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGC 196
Query: 331 ARRVFDHMADRS-------------------------------MDSWHLMINGYADNGLG 359
AR+VFD M++R M +W M+ GYA NG
Sbjct: 197 ARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRP 256
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL 418
E L+ F++M+ +G++ +E T V SAC A++ A +I + +S FG S
Sbjct: 257 KEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGS 316
Query: 419 GLVGVLGKCGHLFEAQQFIE 438
L+ + KCG EA + E
Sbjct: 317 ALIDMYSKCGSPDEAYKVFE 336
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
W MI GYA GL E + +MR+ G+ P TF A+F ACG+A ++ +H +++
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 405 KSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
++ Y+G ++ + KCG L A++ ++ + + E + YA+ +GD
Sbjct: 170 LIG---GFASDLYVGNSMIDLYVKCGFLGCARKVFDE-MSERDVVSWTELIVAYAK-YGD 224
Query: 463 IDLEDHAEELMVDLDPSK 480
+ + A L DL PSK
Sbjct: 225 M---ESASGLFDDL-PSK 238
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 203/367 (55%), Gaps = 33/367 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N E K++H + L ++N +++MY KC + A+ +F M + + SW
Sbjct: 248 CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISW 307
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+I G A +G +E L L+++M ++PNE TF+ + AC A + F SM +
Sbjct: 308 TSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTT 367
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
++ I+P +HY L+ +L + GHL EA+ ++ K+PF+P W +L + H ++++
Sbjct: 368 DYSINPSLQHYTCLLDLLSRSGHLDEAENLLD-KIPFKPDEPTWASLLSACMRHNNLEMG 426
Query: 467 DHAEELMVDLDPSKADPK------------KIPTPPPKKRTAISILD-----GKSRLVEF 509
+ ++DL P DP ++ K R +S ++ G S +
Sbjct: 427 VRIADRVLDLKPE--DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFG 484
Query: 510 RNPTLYRDDEK------------LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
++ ++ E LK L+ +M++ YVP+T +VL+DI+Q+ KE+ L +HS
Sbjct: 485 KDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHS 544
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
ERLA+AYGL+ T +RI+KNLR+CGDCHN +K +S IV RE++VRD R+HHFK+GK
Sbjct: 545 ERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGK 604
Query: 617 CSCGDYW 623
CSC D+W
Sbjct: 605 CSCNDFW 611
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G++ D F + C + + K+VH F+ S D V+ + +I+MY KCG +A
Sbjct: 100 GLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEA 159
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R VFD + ++ SW MI+GYA +G E + LF Q
Sbjct: 160 RAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+LC + A ++H +++ +L+N ++++YGKCG + A ++FD M +R
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
SW ++ + + L + M GLQP+ F + AC S + +H
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
M S F + L+ + KCG EA+ + L F+ + + + YAR
Sbjct: 130 RFMLSXFCDDEVVKS--SLIDMYTKCGQPDEARAVFDSIL-FKNSVSWTSMISGYAR 183
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 197/356 (55%), Gaps = 29/356 (8%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ +H ++S I ++ + + +++MYGKCG + DA ++F R++ +W+ MI GYA
Sbjct: 233 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 292
Query: 356 NGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
G L +F+ M + G PN T + V ++C ++ + FE+M+ FGI P T
Sbjct: 293 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT 352
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
EHY +V +LG+ G +A + I Q +P P+ W AL ++HG +L A E +
Sbjct: 353 EHYACVVDLLGRAGMEEQAYEVI-QGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLF 411
Query: 475 DLDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEFRNP- 512
+LDP + K++ KK S + K+ + FR
Sbjct: 412 ELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKD 471
Query: 513 ---TLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+Y + + L K QM+ + Y+PDT+Y L+D+++E KE + HSE+LA+A+GLI
Sbjct: 472 TKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLIC 531
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P P+RI+KNLR+C DCH A K +S IVGRE+IVRDN RFHHFK +CSCGDYW
Sbjct: 532 IPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
F C + ++ H + ++ D+ + N +++ YGKC AR VFD M R
Sbjct: 118 AFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR 177
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW M+ YA NG +E + R+ G +P + + + C + +H
Sbjct: 178 NSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALH 237
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+++S I LV + GKCG + +A+Q
Sbjct: 238 AVAVRS--CIDANIFVASALVDMYGKCGCVEDAEQIF 272
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D ++ ++MY K G + AR +F M +R++ +W+ ++ +G E ++ + +R
Sbjct: 46 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 105
Query: 371 KLGLQPNEQTFLAVFSACGSA 391
+ G PN + A F+AC A
Sbjct: 106 EAGGLPNVVSACAFFNACAGA 126
>gi|302781368|ref|XP_002972458.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
gi|300159925|gb|EFJ26544.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
Length = 381
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 206/382 (53%), Gaps = 33/382 (8%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GVK ++ F ++ E C + + +H + + + +L++ ++ MY KCG + +
Sbjct: 4 EGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKCGKLVE 63
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR VFD M + +W ++ G A +G +E L +M G++PN TFL++ AC
Sbjct: 64 AREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLVYACSH 123
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ ++EA F +M ++ G P EH+ ++ +LG+ G L EAQ+ I+ +PFEP W
Sbjct: 124 SGYLDEARDCFIAM-ADHGFFPLPEHFRCVIDLLGRGGRLEEAQEVID-AMPFEPGLTAW 181
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKI----PTP 489
+ + R+ D+ + A E +++P++ D +K+
Sbjct: 182 LTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVEKVRRLMERR 241
Query: 490 PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH 541
KK +S ++ K+RL EF + +Y + KL ++KE+ YVPDT VLH
Sbjct: 242 GVKKEPGLSCIEVKNRLHEFGAADKSHPQKDLIYEELRKLTL--EIKEAGYVPDTSLVLH 299
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
++D+E K+ L +HSERLA+ YGLI+TP T L ++ NLR+C DCH A K +S I R++
Sbjct: 300 NVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCHTAFKYISTISNRQI 359
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFH F G CSC DYW
Sbjct: 360 VVRDANRFHTFATGGCSCKDYW 381
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 199/357 (55%), Gaps = 28/357 (7%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E K +H Y L+ + L + + ++ +Y +CG++ RVF+ M R + SW+ +I+ Y
Sbjct: 303 EQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSY 362
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+G G + +Q+F++M GL P+ +F++V AC A +EE + FESM I P
Sbjct: 363 GIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPS 422
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY +V +LG+ L EA + I+ + EP + W +L RIH +++L + A +
Sbjct: 423 VEHYACMVDLLGRANRLDEAAKIIDD-MRIEPGPKVWGSLLGSCRIHCNVELAERATSRL 481
Query: 474 VDLDPSKA-----------------DPKKIPTPPP----KKRTAISILDGKSRLVEFR-- 510
+L+P+ A + K++ +K S ++ + ++ F
Sbjct: 482 FELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSV 541
Query: 511 ---NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
NP + + L L+ +MKE YVPDT+ VL+D+D E KE+ +L HSE+LA+A+GLI
Sbjct: 542 DEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLI 601
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ +RI KNLR+C DCH+ K +S+ RE++VRD RFH F+DG CSCGDYW
Sbjct: 602 NSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYE----NAKKVHDYFLQST 307
L G +E ++L + GV +D + + + C + + N +++H + L+
Sbjct: 154 LTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHG 213
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
G + + +++MY + G + +A RVFD M +++ SW MI Y+ NG E L+LF
Sbjct: 214 FEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFR 273
Query: 368 QM--RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVL 424
+M L PN T ++V AC + A+E+ +H ++ G+ LV V
Sbjct: 274 KMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRR--GLDSILPVVSALVTVY 331
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+CG+L + E+ + + W +L + IHG
Sbjct: 332 ARCGNLELGHRVFERMEKRDVVS--WNSLISSYGIHG 366
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC++G + +A++++ + + L C +H + + D L
Sbjct: 57 LCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLA 116
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I MY + S+ +AR+VFD R++ W+ + G G E L L+ +M ++G+
Sbjct: 117 TKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVP 176
Query: 376 PNEQTFLAVFSACGSADAIEEAF-----IHFESMKSEFGISPGTEHYL-GLVGVLGKCGH 429
+ T+ V AC +++A IH ++ F G H + L+ + + G
Sbjct: 177 SDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGF---EGHVHIMTTLLDMYARFGC 233
Query: 430 LFEAQQFIEQKLPFEPTAEFWEAL 453
+ A + +Q +P + W A+
Sbjct: 234 VLNASRVFDQ-MPVKNVVS-WSAM 255
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q GK EA + K V+ D + +L C + ++ K H + I +
Sbjct: 413 QNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETS 472
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + +R++FD M R + SW+ MI GY +GLG E LF M+
Sbjct: 473 ICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQA 532
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+P++ TF+ + SAC + + E F M ++GI+P EHY+G+V +L + G L EA
Sbjct: 533 CEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEA 592
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
QFI Q +P + W AL R+H +IDL ++ L P
Sbjct: 593 YQFI-QGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSA 651
Query: 479 -----SKADPKKIPTPPP-KKRTAISILDGKSRLVEF--------RNPTLYRD-DEKLKA 523
A+ + I KK S ++ L F ++ +Y++ D L
Sbjct: 652 AGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVD 711
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+N++ Y DT +VL D+++E KE+ALLYHSE+LAIA+G+++ + + KNLRVC
Sbjct: 712 INKLG---YRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVC 768
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH IK M+ + R +IVRD RFHHFK+G+CSCGD+W
Sbjct: 769 GDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 15/237 (6%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYT------LFELCGNPKWYENAKKVHDYFLQSTIR 309
LC G++ EA L K + A CF + C N K++H +S +
Sbjct: 311 LC--GRMLEAFSLF-KDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLH 367
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DL N ++ MY K G + A +FD M + S+ +++GY NG DE ++F +M
Sbjct: 368 TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ +QP+ T +++ AC A++ S+ GI+ T L+ + KCG
Sbjct: 428 QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCGR 486
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ ++Q + +P + + Y IHG L A L +D+ +P +
Sbjct: 487 IDLSRQIFD-VMPARDIVSWNTMIAGYG-IHG---LGKEATALFLDMKHQACEPDDV 538
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + + C +A+ VH + ++ + DL ++ ++++Y KC S A VF M
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP 191
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
R + +W+ M+ GYA +G + + M+ PN T +A+ A+ +
Sbjct: 192 ARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRA 250
Query: 399 IHFESMKS------EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+H S+++ + G+ GT L+ + KCGHL A + E
Sbjct: 251 VHAYSVRACSLHDHKDGVLVGT----ALLDMYAKCGHLVYASRVFE 292
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 251 ADLARLCQEGKVKEAIE---LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
A LA GK + I LM +AS L L + VH Y +++
Sbjct: 200 AMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRAC 259
Query: 308 IRGD----LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
D +++ +++MY KCG + A RVF+ MA R+ +W ++ G+ G E
Sbjct: 260 SLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAF 319
Query: 364 QLFEQMRKLGL 374
LF+ M GL
Sbjct: 320 SLFKDMLAQGL 330
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 203/367 (55%), Gaps = 33/367 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N E K++H + L ++N +++MY KC + A+ +F M + + SW
Sbjct: 248 CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISW 307
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+I G A +G +E L L+++M ++PNE TF+ + AC A + F SM +
Sbjct: 308 TSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTT 367
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
++ I+P +HY L+ +L + GHL EA+ ++ K+PF+P W +L + H ++++
Sbjct: 368 DYSINPSLQHYTCLLDLLSRSGHLDEAENLLD-KIPFKPDEPTWASLLSACMRHNNLEMG 426
Query: 467 DHAEELMVDLDPSKADPK------------KIPTPPPKKRTAISILD-----GKSRLVEF 509
+ ++DL P DP ++ K R +S ++ G S +
Sbjct: 427 VRIADRVLDLKPE--DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFG 484
Query: 510 RNPTLYRDDEK------------LKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHS 556
++ ++ E LK L+ +M++ YVP+T +VL+DI+Q+ KE+ L +HS
Sbjct: 485 KDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHS 544
Query: 557 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
ERLA+AYGL+ T +RI+KNLR+CGDCHN +K +S IV RE++VRD R+HHFK+GK
Sbjct: 545 ERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGK 604
Query: 617 CSCGDYW 623
CSC D+W
Sbjct: 605 CSCNDFW 611
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G++ D F + C + + K+VH F+ S D V+ + +I+MY KCG DA
Sbjct: 100 GLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDA 159
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
R VFD + ++ SW MI+GYA +G E + LF Q
Sbjct: 160 RAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+LC + A ++H +++ +L+N ++++YGKCG + A ++FD M +R
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAF-IHF 401
SW ++ + + L + M GLQP+ F + AC S + +H
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
M S F + L+ + KCG +A+ + L F+ + + + YAR
Sbjct: 130 RFMLSFFCDDEVVKS--SLIDMYTKCGQPDDARAVFDSIL-FKNSVSWTSMISGYAR 183
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 199/385 (51%), Gaps = 36/385 (9%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
D V+ + S ++ C N ++VH + + + + ++ MY KCG +
Sbjct: 238 DADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLD 297
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
A ++F M R + +W+ MI+GYA +G G E ++LFE+M+ G++PN TF+AV +AC
Sbjct: 298 GACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACI 357
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ FE M+ +GI +HY +V +L + G L A I + +PF+P
Sbjct: 358 HTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLI-RSMPFQPHPSA 416
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------------------------D 482
+ L N +R++ +++ + A +++ +P A D
Sbjct: 417 YGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKD 476
Query: 483 PKKIPTPP---PKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQ-MKESTYVPDTRY 538
+ TP + I + RL +P L E+L L + MK YVPD +
Sbjct: 477 NAVVKTPGYSWVEINGVIHVFRSNDRL----HPQLSLIHERLCQLEERMKAMGYVPDLDF 532
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
LHD+D+ K Q L+ HSE+LAIA+GL+ST LRI KNLRVCGDCH A K++S+I
Sbjct: 533 ALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIED 592
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I+RD RFHHF+ G CSCGDYW
Sbjct: 593 REIILRDTTRFHHFRSGHCSCGDYW 617
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 20/192 (10%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
A SCF ++C + +E+A + + VL ++ Y G + A +
Sbjct: 151 AMVSCFAHAGDMCAAEECFEDAPD----------KENAVLWTAMVSGYMDSGHVEKAMQF 200
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGLQPNEQTFLAVFSACGSADA 393
F+ M RS+ SW+ ++ GY N ++ L +F+ M R ++PNE T +V C + A
Sbjct: 201 FEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSA 260
Query: 394 IEEAF-IHFESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ +H K ++ GT LV + KCG L A + + + A W
Sbjct: 261 LGFGRQVHQWCTKLPLSRRVTAGTS----LVSMYCKCGDLDGACKLFSEMRIRDVIA--W 314
Query: 451 EALRNYARIHGD 462
A+ + HGD
Sbjct: 315 NAMISGYAHHGD 326
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 210/400 (52%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI--RGD 311
Q G+ KEA+E + D G++ D + C ++A + D +S G+
Sbjct: 252 QNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGN 311
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ + +I+MY KCGS +A +VF+ M +R++ S+ MI GYA +G LQLF M K
Sbjct: 312 VVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK 371
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++PN+ TF+ + SAC A +E+ F M+ FG++P +HY +V +LG+ G L
Sbjct: 372 TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLE 431
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD--------- 482
EA + + +P EP W AL RIHG+ D+ A + L+P+
Sbjct: 432 EALDLV-KTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIY 490
Query: 483 ------------PKKIPTPPPKKRTAISILDGKSRLVE--FRNPTLY-RDDEKLKALNQM 527
K I KK S +GK+ + F T + R E +AL Q+
Sbjct: 491 ASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQL 550
Query: 528 KEST----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
E Y P+ +D+ + KE+ L+ HSE+LA+AYGL+ T A ++I+KN+R+C
Sbjct: 551 IERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRIC 610
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCHN + S I GRE+IVRDN RFHHF +G CSCG++W
Sbjct: 611 EDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 33/200 (16%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVH-DYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
GV + F LF+ CG + K+VH L DL + N +I++Y KCG +
Sbjct: 137 GVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGC 196
Query: 331 ARRVFDHMADRS-------------------------------MDSWHLMINGYADNGLG 359
AR+VFD M++R M +W M+ GYA NG
Sbjct: 197 ARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRP 256
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL 418
E L+ F++M+ +G++ +E T V SAC A++ A +I + +S FG S
Sbjct: 257 KEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGS 316
Query: 419 GLVGVLGKCGHLFEAQQFIE 438
L+ + KCG EA + E
Sbjct: 317 ALIDMYSKCGSPDEAYKVFE 336
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 346 WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESM 404
W MI GYA GL E + +MR+ G+ P TF A+F ACG+A ++ +H +++
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 405 KSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
++ Y+G ++ + KCG L A++ ++ + + E + YA+ +GD
Sbjct: 170 LIG---GFASDLYVGNSMIDLYVKCGFLGCARKVFDE-MSERDVVSWTELIVAYAK-YGD 224
Query: 463 ID 464
++
Sbjct: 225 ME 226
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 209/398 (52%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQS-TIRGDL 312
Q GK EA++L + +++ D + E+ K +H Y S ++ ++
Sbjct: 228 QHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNV 287
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ +++MY KCGS+ DA VF + ++ + W+ MINGYA +G + L++F Q+R
Sbjct: 288 RVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQ 347
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL P + TF+ + +AC + +EE F+SM+ E+GI P EHY +V +LG+ G + E
Sbjct: 348 GLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEE 407
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD-----------LDPSKA 481
A + Q L P A W +L R+H ++ L + +V L A
Sbjct: 408 AFHLV-QSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYA 466
Query: 482 DPKK----------IPTPPPKKRTAISILDGKSRLVEFRNPTLYR--DDEKLKALNQM-- 527
K + +K S ++ ++ EF + DE L++M
Sbjct: 467 AVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNA 526
Query: 528 --KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
KE +VP T VLHD+D+ KE+AL HSE+LA+A+GLIS+ + ++I+KNLR C D
Sbjct: 527 LVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSD 586
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH +K++S+I R+++ RD RFHHF DG C+CGDYW
Sbjct: 587 CHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V ++ Y G++ DARR+FD + + W+ MI+GY +G +E LQLF +M +
Sbjct: 185 VVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR 244
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
+P+E T + V SA +E +K+ + LV + KCG L
Sbjct: 245 SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLE 304
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
+A W A+ N +HGD
Sbjct: 305 DAVAVFHG--IGNKDIVVWNAMINGYAMHGD 333
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 205/395 (51%), Gaps = 36/395 (9%)
Query: 261 KVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
K + ELM + GV A+ + ++ C + E ++ H+Y ++S + +L+L ++
Sbjct: 234 KAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALV 293
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY +CG + A RVF+ + D+ SW +I G A +G + + F QM +LG P +
Sbjct: 294 DMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDI 353
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
T AV SAC +++ +E+MK ++GI P EHY +V +LG+ G L EA+ FI
Sbjct: 354 TLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFI-L 412
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------------ 481
K+P +P A AL +I+ + ++ + +++++ P +
Sbjct: 413 KMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEK 472
Query: 482 --------DPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLK-----ALNQMK 528
K + PP I DGK + + + K+K L +++
Sbjct: 473 LESLRDIMKEKLVKKPPGWSLIEI---DGKINKFSMGDDQKHPEMGKIKRLWEEILGKIR 529
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
Y +T D+D+E KE A+ HSE+LAIAYG++ T T +RI+KNLRVC DCH
Sbjct: 530 LIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHT 589
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
A K++S + GRE IVRD RFHHF++G CSC DYW
Sbjct: 590 ATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V ++ Y KCG + DAR +FD M R++ +W +MINGYA N ++ + LFE M+
Sbjct: 184 DVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMK 243
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGIS--PGTEHYLGLVGVLGKC 427
+ G+ NE ++V S+C A+E H +KS ++ GT LV + +C
Sbjct: 244 REGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGT----ALVDMYWRC 299
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD 482
G + +A + E+ LP + + W ++ +HG H MV L S D
Sbjct: 300 GEIEKAIRVFEE-LPDKDSLS-WSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRD 352
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 207/399 (51%), Gaps = 34/399 (8%)
Query: 258 QEGKVKEAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q GK KEA+EL + K K D + C + +H Y + ++ +
Sbjct: 346 QCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNC 405
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
L +I+MY KCG + A VF + + + W MI G A +G G + + LF +M++
Sbjct: 406 HLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQED 465
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++PN TF + AC +EE F M+ +G+ PG +HY +V +LG+ G L E
Sbjct: 466 KVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEE 525
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------S 479
A + IE K+P P A W AL IH ++ L + A +++L+P +
Sbjct: 526 AVELIE-KMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYA 584
Query: 480 KADP--------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ 526
KA K + KK S ++ + EF +P+ + KL +
Sbjct: 585 KAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVA 644
Query: 527 MKEST-YVPDTRYVLHDIDQE-AKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
E+ YVP+ ++L +++E KEQAL HSE+LAIA+GLIST P+RI+KNLRVCG
Sbjct: 645 RLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCG 704
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ K++S++ RE+++RD RFHHF++G CSC DYW
Sbjct: 705 DCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 47/249 (18%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ Q G +EA+EL + VK + + C +E + VH Y ++ I
Sbjct: 209 ITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRI 268
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD-------- 360
L L+N +++MY KCGS+ DA+R+FD M ++ + SW M+ GYA G D
Sbjct: 269 GESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDA 328
Query: 361 -----------------------EGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIE- 395
E L+LF +++ +P+E T ++ SAC A++
Sbjct: 329 MPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDL 388
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQKLPFEPTAEFWEA 452
+IH K G+ L+ + KCG L +A +E+K F W A
Sbjct: 389 GGWIHVYIKKQ--GMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVF-----VWSA 441
Query: 453 LRNYARIHG 461
+ +HG
Sbjct: 442 MIAGLAMHG 450
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K H ++ + D+ + N +I Y KCG + RVF ++ R + SW+ MI +
Sbjct: 154 TGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFV 213
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPG 413
G +E L+LF++M ++PN T + V SAC E ++H ++ G S
Sbjct: 214 QGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLT 273
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
+ ++ + KCG + +A++ + K+P + + L YA+I
Sbjct: 274 LSN--AMLDMYTKCGSVEDAKRLFD-KMPEKDIVSWTTMLVGYAKI 316
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 204/384 (53%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +G+ D + + +C K++H Y +S ++ + N +IEMY KCG
Sbjct: 513 EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCG 572
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ + +VF +M ++ + +W +I+ + G G + L+ F+ M G+ P+ F+A
Sbjct: 573 SLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIF 632
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + ++E F+ MK+++ + P EHY +V +L + G L +A++FI +P +P
Sbjct: 633 ACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFI-LSMPMKPD 691
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDL---------------------DPSKADPKK 485
A W AL + R G+ ++ + +++L D K
Sbjct: 692 ASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNS 751
Query: 486 IPTPPPKKRTAISILDGKSRLVEFRN-PTLYRDDEKLKALNQ-----MKESTYVPDTRYV 539
+ T KK S ++ + R+ FR + +K+K L + M + YV D ++
Sbjct: 752 MKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFA 811
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD++++ K L HSERLAIA+GL++T +PL ++KNLRVCGDCH K +++I+ R
Sbjct: 812 LHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQR 871
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD RFH FKDG CSCGD+W
Sbjct: 872 EILVRDANRFHRFKDGACSCGDHW 895
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 8/249 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMD 270
S + +S Q+ + +++V + P + L S+ + L G +A+ E+ +
Sbjct: 57 SGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSI--IRALTHNGLFTQALGYYTEMRE 114
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
K ++ DA F ++ C E VH++ ++ DL + N +I+MY + + +
Sbjct: 115 KKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDN 174
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR VF+ M++R SW+ +I+GY NG ++ L ++ + R G+ P+ T +V ACGS
Sbjct: 175 ARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGS 234
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A++E + + + GI+ GL+ + K L EA++ + K+ + + +
Sbjct: 235 LMAVKEG-VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR-VFSKMAVKDSVTWN 292
Query: 451 EALRNYARI 459
+ YA++
Sbjct: 293 TMICGYAQL 301
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A L R E VK ++++D G D + CG + K VH Y + S
Sbjct: 299 AQLGR--HEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFEC 355
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V N +I+MY KCG + A+ VFD + +W+ +INGY +G EGL+ F+ M
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM- 414
Query: 371 KLGLQPNEQTF---LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLG 425
K+ +P+ TF L++FS AD + IH + +K FG E +G L+ V
Sbjct: 415 KMERKPDSVTFVLLLSIFSQL--ADINQGRGIHCDVIK--FGFEA--ELIIGNSLLDVYA 468
Query: 426 KCGHL 430
KCG +
Sbjct: 469 KCGEM 473
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 257 CQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C G ++A+++ K G+ D ++ CG+ + VH + I GD+
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N ++ MY K + +ARRVF MA + +W+ MI GYA G + ++LF M
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID- 316
Query: 373 GLQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G P+ + + ACG S D F+H + S G T L+ + KCG L
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGS--GFECDTVACNILIDMYAKCGDLL 374
Query: 432 EAQQFIE 438
AQ+ +
Sbjct: 375 AAQEVFD 381
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 258 QEGKVKEAIE---LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
Q G KE +E +M K D+ F L + + +H ++ +L++
Sbjct: 400 QSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N ++++Y KCG M D +VF +M+ + SW+ +I G Q+ +MR GL
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGL 519
Query: 375 QPNEQTFLAVFSAC 388
P+E T L + C
Sbjct: 520 MPDEATVLGILPMC 533
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYAD 355
+ VH + S + ++ + K+I Y + + VF ++ ++ W+ +I
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-EAFIHFESMKSEF 408
NGL + L + +MR+ LQP+ TF +V ++C +E +H +M+ F
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGF 152
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 216/401 (53%), Gaps = 37/401 (9%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C G+ +++ E+ GV+ L C + K++H + L+ D+
Sbjct: 439 CHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDM 498
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V++ +I+MY K GS+ A+ +F+ + +++ + M+ G A +G G E ++LF M
Sbjct: 499 VVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNS 558
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL+P+ TF A+ +AC S + E + +F+SM++++G+ P TE+Y +V +L +CG+L E
Sbjct: 559 GLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDE 618
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--------------LMVDL-- 476
A FIE+ P +P A W AL IHG++ L + A LM++L
Sbjct: 619 AMDFIERS-PIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYE 677
Query: 477 -----DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D +++ + R S + + + F +Y +E ++
Sbjct: 678 YERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIY--EELIRL 735
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRV 582
+ Q+K++ YVPDT + +++ +E KE+ LL H+E+LAI YGLI S +R P+R++KN R+
Sbjct: 736 VFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRM 795
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH K +S + R++I+RD RFHHF DGKCSC DYW
Sbjct: 796 CNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ +EA+ ++ +G++ DA+ +L + N + ++H +FL++ + D+
Sbjct: 269 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 328
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++MY KCG + A++V D + R++ +W+ ++ GYA+ G D L+L E M+K
Sbjct: 329 TGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNR 388
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
L P+ T+ + + +A + +K+ G++P + L+ G C
Sbjct: 389 LDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA-GVTPNVVSWTSLIS--GSC 439
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L + + EAI E+ +GV AD + CG + VH Y L+ +
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLAL 187
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + MY + + A RV D M S+ W+ ++ A GL D+ L+L +
Sbjct: 188 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 247
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
M + G +PN T+ V S C EA SM + G+ P
Sbjct: 248 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQ-GLRP 290
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 210/395 (53%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+++EA+ L K G+ AD L + + +H Q + D+ L
Sbjct: 349 GRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLG 408
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KCG + +A F M+ R + +W MI G A NG+G L+ F M+ G
Sbjct: 409 TALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFH 468
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
N T++AV +AC + ++E ++F+ M+ I P EHY ++ +LG+ G L EA
Sbjct: 469 ANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMD 528
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK--------------- 480
+ Q +P +P A W ++ + R+H ++DL +A ++ L+P++
Sbjct: 529 LV-QTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSR 587
Query: 481 --ADPKKIPTPPPK---KRTA----ISILDGKSRLV--EFRNPTLYRDDEKLKALNQ-MK 528
D KI K K+TA I++ + + + +P + ++ + + +K
Sbjct: 588 QWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLK 647
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ Y P T + D+D+E KEQALL HSE+LAIA+GL+S P+ IIKNLRVC DCH+
Sbjct: 648 SAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHS 707
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
AIK++SR+ RE+IVRD RFHHF+ G CSC D+W
Sbjct: 708 AIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 276 DASCFYTLFELCGNPKWYEN-AKKVHDYFLQSTIRGDL-VLNNKVIEMYGKCGSMTDARR 333
DA F+ LF+ C + + +H ++ + + ++ + +I MY + G DARR
Sbjct: 102 DAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARR 161
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
FD + + + +W +I+G A GL D+ +L + N T+ + S A
Sbjct: 162 AFDEASVKDVVAWTTVISGLAKMGLLDDARRLLAR----APVRNVVTWTGLISGYSRAGR 217
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
EA F SM S+ GI+P + ++G+L CG L
Sbjct: 218 AAEAVDCFNSMLSD-GIAPDE---VTVIGMLSACGQL 250
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 13/192 (6%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ EA++ ++ G+ D + CG K +H +
Sbjct: 214 RAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDK 273
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
L +I+MY KCG AR VFD + R W+ MI+GY G D LF+QM
Sbjct: 274 LVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQME-- 331
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ TF ++ + + EA + F M+ G+ +GL+ G L +
Sbjct: 332 --DHDVITFNSLITGYIHGGRLREALLLFTKMRRH-GLGADNFTMVGLLTASASLGALPQ 388
Query: 433 AQQF---IEQKL 441
+ IEQ+L
Sbjct: 389 GRALHACIEQRL 400
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ Y K G + AR +FD M D + +++ +I GY G E L LF +MR+ GL
Sbjct: 308 NAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLG 367
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ T + + +A S A+ + +H E E + GT L+ + KCG + E
Sbjct: 368 ADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGT----ALLDMYMKCGRVEE 423
Query: 433 AQQFIEQ 439
A +Q
Sbjct: 424 AMVAFKQ 430
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 209/399 (52%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA + K V+ DA+ +L C + ++ + H + + +
Sbjct: 418 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 477
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + +R+VF+ M R + SW+ MI GY +GLG E LF +M LG
Sbjct: 478 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TF+ + SAC + + E F M +G++P EHY+ +V +L + G L EA
Sbjct: 538 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 597
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
+FI Q +P W AL R++ +IDL ++ +L P
Sbjct: 598 YEFI-QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 656
Query: 480 ------KADPKKI-PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
A+ + I KK S ++ L F ++P +YR+ + + L
Sbjct: 657 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNI--L 714
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+K+ Y PDT +VL D+++E KE+AL+ HSE+LAIAYG++S + + KNLRVCG
Sbjct: 715 VGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCG 774
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH IK +S + R +IVRD RFHHFK+G+CSCGD+W
Sbjct: 775 DCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 12/216 (5%)
Query: 268 LMDKGVKADASCFYT------LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
L+ K + A CF + C + +++H +S + DL N ++ M
Sbjct: 325 LLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSM 384
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y K G + A +FD MA + S+ +++GY NG +E +F++M+ ++P+ T
Sbjct: 385 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 444
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+++ AC A++ S+ G++ T L+ + KCG + ++Q + +
Sbjct: 445 VSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMM 502
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
P + + Y IHG L A L ++++
Sbjct: 503 PSRDIVSWNTMIAGYG-IHG---LGKEATALFLEMN 534
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+ C + + +H + + + ++ DL ++ +++MY KC + DA +F M R +
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 344 DSWHLMINGYADNGLGDEGLQ--LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IH 400
+W+ M+ GYA +G+ + L QM+ L+PN T +A+ A+ + +H
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 401 FESMK--------SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ S+ ++ G L+ + KCG L A++ +
Sbjct: 252 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 297
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFL----------QSTIRGDLVLNNKVIEMY 322
++ +AS L L VH Y + +S + ++L +++MY
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY 283
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
KCGS+ ARRVFD M R+ +W +I G+ + LF+ M GL T +
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343
Query: 383 A-VFSACGSAD 392
A AC S D
Sbjct: 344 ASALRACASLD 354
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 217/416 (52%), Gaps = 35/416 (8%)
Query: 240 PAGDQV-LPPSVADLARLCQEGKVKEA-IELMDKGVKADASCFYTLFELCGN-PKWYENA 296
PA D V + LA+ K E I+L+ +GVK + F ++ C + E+
Sbjct: 466 PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K++H ++S L +++ ++ MY K G++ A +VF +R + SW+ MI GY +
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQH 585
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G + L++F+ M+ GL ++ TF+ V +AC A +EE +F M ++ I EH
Sbjct: 586 GDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEH 645
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y +V + + G +F+ I +PF + W L R+H +++L A E +V L
Sbjct: 646 YSCMVDLYSRAG-MFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSL 704
Query: 477 DPS--------------------KADPKKIPTP-PPKKRTAISILDGKSRLVEFR----- 510
P+ KA +K+ KK S ++ K+R+ F
Sbjct: 705 QPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVS 764
Query: 511 ---NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+ +Y E+L ++K+ Y PDT YV HD+++E KE L HSERLAIAYGLI+
Sbjct: 765 HPFSDLVYAKLEELSI--KLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIA 822
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P P++I KNLR+CGDCHN I+++S I R LIVRD+ RFHHFK G CSCG YW
Sbjct: 823 LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+L G+ D ++CG ++VH L+S D+ + +++MY K
Sbjct: 94 DLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTE 153
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
D R +FD M +++ SW +++GYA NGL DE + L QM+ G+ PN TF V
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 387 ACGSADAIEEAF-IHFESMKSEF 408
A IE +H +K+ F
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGF 236
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 264 EAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
E I L++ +GV + F T+ + E +VH +++ + N +I
Sbjct: 188 EVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALI 247
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MY K + DA VFD M R +W++MI GYA G EG Q+F +MR G++ +
Sbjct: 248 CMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRT 307
Query: 380 TFLAVFSAC 388
F C
Sbjct: 308 VFCTALKLC 316
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++ Y K G++ ++ RVF + + + +W M+ G A ++ +++F Q+ K G++PN
Sbjct: 445 LLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPN 504
Query: 378 EQTFLAVFSACGSADAIEEAF--IHFESMKS 406
E TF +V +AC S+ A E IH ++KS
Sbjct: 505 EYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVK + F T +LC + K++H +++ + ++ Y KC S+ +A
Sbjct: 301 GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEA 360
Query: 332 RRVFDHMADRS--MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
++F MAD + + +W MI G+ N ++ + LF QM + G++PN T+ V +
Sbjct: 361 FKLFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG 417
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 199/383 (51%), Gaps = 38/383 (9%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D T+ C N E + VH Y + R D + + +I+MY K GS+ DA
Sbjct: 635 VVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAW 694
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF + ++ W MI+GYA +G G + LFE+M G+ PNE TFL V +AC A
Sbjct: 695 MVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAG 754
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
IEE +F MK + I+PG EH +V + G+ GHL + + FI + W++
Sbjct: 755 LIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKN-GISHLTSVWKS 813
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPP---------------------- 490
+ R+H ++++ E+++ + PS DP
Sbjct: 814 FLSSCRLHKNVEMGKWVSEMLLQVAPS--DPGAYVLLSNMCASNHRWDEAARVRSLMHQR 871
Query: 491 -PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN----QMKESTYVPDTRYVL 540
KK+ S + K ++ F +P +DDE L+ ++KE Y D + V+
Sbjct: 872 GVKKQPGQSWIQLKDQIHTFVMGDRSHP---QDDEIYSYLDILIGRLKEIGYSFDVKLVM 928
Query: 541 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRE 600
D+++E E + +HSE+LA+ +G+I+T RTP+RIIKNLR+C DCHN IK S+++ RE
Sbjct: 929 QDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDRE 988
Query: 601 LIVRDNKRFHHFKDGKCSCGDYW 623
+IVRD RFHHFK G CSCGDYW
Sbjct: 989 IIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 37/248 (14%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYEN 295
P D V ++ D L Q G + A+E +++ G + A F L + E
Sbjct: 483 PYKDVVSWNTIVD--GLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVEL 540
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD----------- 344
+++H L+ D + + ++EMY KCG M A + + D +D
Sbjct: 541 GRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASII---LRDVPLDVLRKGNARVSY 597
Query: 345 --------SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
SW M++GY NG ++GL+ F M + + + +T + SAC +A +E
Sbjct: 598 KEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEF 657
Query: 397 A-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+H K I + Y+G L+ + K G L +A Q EP W ++
Sbjct: 658 GRHVHAYVQK----IGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQ--SNEPNIVMWTSM 711
Query: 454 RNYARIHG 461
+ +HG
Sbjct: 712 ISGYALHG 719
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG + ++ + C + K VH + L++ I D+VL N ++++Y KC
Sbjct: 380 EMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCK 439
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
A R+F+ M + + SW++MI Y G ++ L +F ++
Sbjct: 440 VFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL 482
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ +Y K +M A+++FD + R+ +W ++I+G+A G + LF +M+ G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 376 PNEQTFLAVFSAC 388
PN+ T +V C
Sbjct: 388 PNQYTLSSVLKCC 400
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 216/401 (53%), Gaps = 37/401 (9%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C G+ +++ E+ GV+ L C + K++H + L+ D+
Sbjct: 439 CHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDM 498
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V++ +I+MY K GS+ A+ +F+ + +++ + M+ G A +G G E ++LF M
Sbjct: 499 VVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNS 558
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL+P+ TF A+ +AC S + E + +F+SM++++G+ P TE+Y +V +L +CG+L E
Sbjct: 559 GLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDE 618
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--------------LMVDL-- 476
A FIE+ P +P A W AL IHG++ L + A LM++L
Sbjct: 619 AMDFIERS-PIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYE 677
Query: 477 -----DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D +++ + R S + + + F +Y +E ++
Sbjct: 678 YERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIY--EELIRL 735
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRV 582
+ Q+K++ YVPDT + +++ +E KE+ LL H+E+LAI YGLI S +R P+R++KN R+
Sbjct: 736 VFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRM 795
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH K +S + R++I+RD RFHHF DGKCSC DYW
Sbjct: 796 CNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ +EA+ ++ +G++ DA+ +L + N + ++H +FL++ + D+
Sbjct: 269 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 328
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++MY KCG + A++V D + R++ +W+ ++ GYA+ G D L+L E M+K
Sbjct: 329 TGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNR 388
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
L P+ T+ + + +A + +K+ G++P + L+ G C
Sbjct: 389 LDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA-GVTPNVVSWTSLIS--GSC 439
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A L + + EAI E+ +GV AD + CG + VH Y L+ +
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLAL 187
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++ + MY + + A RV D M S+ W+ ++ A GL D+ L+L +
Sbjct: 188 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 247
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
M + G +PN T+ V S C EA SM + G+ P
Sbjct: 248 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQ-GLRP 290
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 199/379 (52%), Gaps = 28/379 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G + D F ++ C +++H +++ + + + +I MY +CG + +
Sbjct: 280 GFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYS 339
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+VF + + W MI Y +G G E + LF QM + L+ N+ TFL++ AC
Sbjct: 340 LKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHC 399
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
E+ F+ M ++G+ P EHY +V +LG+ G + EA+ I + +P + W+
Sbjct: 400 GLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALI-RSMPVKADVITWK 458
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPP 490
L + +IH ++ E + LDP P K +
Sbjct: 459 TLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRK 518
Query: 491 PKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDID 544
KK IS L+ K+++ +F +P L+ L ++MK+ YVPD VLHD+D
Sbjct: 519 LKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMD 578
Query: 545 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVR 604
E KE +L++HSE+LAIA+ L+ TP TP+R+IKNLRVC DCH AIK +S I RE+IVR
Sbjct: 579 VEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVR 638
Query: 605 DNKRFHHFKDGKCSCGDYW 623
D+ RFHHFK+G+CSCGDYW
Sbjct: 639 DSSRFHHFKNGRCSCGDYW 657
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 42/223 (18%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
A+ LC +G +K+A + + ++ S F L + C + K++H + S
Sbjct: 26 AEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSS 85
Query: 311 DLVLNNKVIEMYGKCGSM-------------------------------TDARRVFDHMA 339
D ++N ++ +Y KCG + AR++FD M
Sbjct: 86 DKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMP 145
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
+R++ +W+ M+ G +EGL LF +M +LG P+E +V C A+
Sbjct: 146 ERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQ 205
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLG----KCGHLFEAQQFI 437
+H K F E L +V L KCG L E ++ I
Sbjct: 206 VHGYVRKCGF------EFNLVVVSSLAHMYMKCGSLGEGERLI 242
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + ++VH Y + +LV+ + + MY KCGS+ + R+ M +++ +W
Sbjct: 194 CAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAW 253
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMK 405
+ +I G A NG +E L + M+ G +P++ TF++V S+C + + IH E +K
Sbjct: 254 NTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIK 313
Query: 406 SEFGISPGTEHYLGLVGVLGKCGHL-FEAQQFIE 438
+ G S L+ + +CG L + + F+E
Sbjct: 314 A--GASLIVSVISSLISMYSRCGCLEYSLKVFLE 345
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 217/416 (52%), Gaps = 35/416 (8%)
Query: 240 PAGDQV-LPPSVADLARLCQEGKVKEA-IELMDKGVKADASCFYTLFELCGN-PKWYENA 296
PA D V + LA+ K E I+L+ +GVK + F ++ C + E+
Sbjct: 466 PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K++H ++S L +++ ++ MY K G++ A +VF +R + SW+ MI GY +
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQH 585
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G + L++F+ M+ GL ++ TF+ V +AC A +EE +F M ++ I EH
Sbjct: 586 GDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEH 645
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y +V + + G +F+ I +PF + W L R+H +++L A E +V L
Sbjct: 646 YSCMVDLYSRAG-MFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSL 704
Query: 477 DPS--------------------KADPKKIPTP-PPKKRTAISILDGKSRLVEFR----- 510
P+ KA +K+ KK S ++ K+R+ F
Sbjct: 705 QPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVS 764
Query: 511 ---NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 567
+ +Y E+L ++K+ Y PDT YV HD+++E KE L HSERLAIAYGLI+
Sbjct: 765 HPFSDLVYAKLEELSI--KLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIA 822
Query: 568 TPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P P++I KNLR+CGDCHN I+++S I R LIVRD+ RFHHFK G CSCG YW
Sbjct: 823 LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+L G+ D ++CG ++VH L+S D+ + +++MY K
Sbjct: 94 DLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTE 153
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
D R +FD M +++ SW +++GYA NGL DE + L QM+ G+ PN TF V
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 387 ACGSADAIEEAF-IHFESMKSEF 408
A IE +H +K+ F
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGF 236
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 264 EAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
E I L++ +GV + F T+ + E +VH +++ + N +I
Sbjct: 188 EVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALI 247
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MY K + DA VFD M R +W++MI GYA G EG Q+F +MR G++ +
Sbjct: 248 CMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRT 307
Query: 380 TFLAVFSAC 388
F C
Sbjct: 308 VFCTALKLC 316
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+++ Y K G++ ++ RVF + + + +W M+ G A ++ +++F Q+ K G++PN
Sbjct: 445 LLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPN 504
Query: 378 EQTFLAVFSACGSADAIEEAF--IHFESMKS 406
E TF +V +AC S+ A E IH ++KS
Sbjct: 505 EYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVK + F T +LC + K++H +++ + ++ Y KC S+ +A
Sbjct: 301 GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEA 360
Query: 332 RRVFDHMADRS--MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
++F MAD + + +W MI G+ N + + LF QM + G++PN T+ V +
Sbjct: 361 FKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG 417
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 212/400 (53%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ ++ +GV + F + CGN AK V ++ G++
Sbjct: 527 QLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVE 586
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ GKCGS+ + F MA ++ SW+ I A +G G G++LF+ M+ G
Sbjct: 587 VANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEG 646
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ T + V S+C A + + + +F +M ++G EHY ++ +L + G L A
Sbjct: 647 IDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHA 706
Query: 434 QQFIEQKLPFEPTAEF-WEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
++F+ ++LPF + F W L ++HGD++ A + ++ L+P P
Sbjct: 707 EEFV-KRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYA 765
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKA 523
K + PKK +S ++ K R+ EFR + ++R+ E+L
Sbjct: 766 GAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLN- 824
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
+MK + +V D + V++D+ + KE L HSE+LAIA+GLIST A PLRI+KNLRVC
Sbjct: 825 -EEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVC 883
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+A K +S +VGRE++VRD RFHHF+ G CSC D+W
Sbjct: 884 SDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ GV D T+F CG+ E K +H +S + + N ++ MY + GS
Sbjct: 440 MLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGS 499
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DAR +FD M R++ SW M+ ++ GL E L++F + G+ PNE TF AV +A
Sbjct: 500 LEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNA 559
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
CG+ +I A + ++ SE G E GL+ LGKCG L E F +
Sbjct: 560 CGNLASIPAAKL-VQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQ 609
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 275 ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRV 334
ADAS F L C +++H L++ I L +++ MY KCGS +AR V
Sbjct: 38 ADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAV 97
Query: 335 FDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F + D+S+ +W +I A +G E LF +M+ G+ PN+ T++AV ACG +
Sbjct: 98 FQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV 157
Query: 395 EEAFIHFESMKS-EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ E+ S E + T ++ GKCG L A + L + A W A+
Sbjct: 158 DTIRARVEACGSLELDVIVAT----AVMNAYGKCGDLDSAWGVFDGILVRD--AAVWNAM 211
Query: 454 RNYARIH--GDIDLEDHAEELMVDLDPSKA 481
+ H GD LE + + + P+K
Sbjct: 212 ISLLVAHEQGDEALELFRQMRLGGVTPNKG 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +GV + + + CG+P W + + S + D+++ V+ YGKCG
Sbjct: 131 EMQLQGVMPNDVTYVAVLGACGHP-WEVDTIRARVEACGS-LELDVIVATAVMNAYGKCG 188
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A VFD + R W+ MI+ + GDE L+LF QMR G+ PN+ T +A +
Sbjct: 189 DLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALN 248
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC + EA + + E T LV + GK G + +A++ E+
Sbjct: 249 ACCHSRDFSEA-LRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFER 300
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+EL + GV + C + + + A ++H + + D V+ ++
Sbjct: 223 EALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALV 282
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
MYGK G + DA +F+ + +R + SW+ M+ A NG D+ + F +M +G P+
Sbjct: 283 NMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRI 342
Query: 380 TFLAVFSAC 388
T++A+ +AC
Sbjct: 343 TYVAILNAC 351
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDA---RRVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLF 366
D+V+ ++ MY +C S A + + D+ S+ W+ +++ Y +N +E +F
Sbjct: 378 DVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIF 437
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLG 425
M G+ + + + VF+ACGS+ ++E+ +IH S+ +E ++ T LV +
Sbjct: 438 RLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIH--SLLTESELTRKTPVQNALVTMYA 495
Query: 426 KCGHLFEAQQFIE 438
+ G L +A++ +
Sbjct: 496 RLGSLEDAREIFD 508
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 244/488 (50%), Gaps = 44/488 (9%)
Query: 168 NQGQVYPHQQQPHSNQYQNPGNQNFQQPRSPNQWNNQQNQGYPQARNSYQQVSPGHQIPN 227
N V PH Q Y + G+ + N + P+ + + G+
Sbjct: 252 NNIVVDPHLQSALVTMYASCGSMDLAL--------NLFEKMTPKNLVASTAMVTGYSKLG 303
Query: 228 QLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTL 283
Q+ N + NQ D V ++ ++ + +EA+ L ++ G+K D ++
Sbjct: 304 QIENARSVFNQMVKKDLVCWSAM--ISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSV 361
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
C + + AK +H + ++ G L +NN +IEMY KCGS+ ARR+FD M +++
Sbjct: 362 ITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNV 421
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
SW MI+ +A +G L+ F QM ++PN TF+ V AC A +EE F S
Sbjct: 422 ISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYS 481
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
M +E I+P HY +V + G+ L EA + +E +P P W +L R+HG+I
Sbjct: 482 MINEHNITPKHVHYGCMVDLFGRANLLREALELVEA-MPLAPNVIIWGSLMAACRVHGEI 540
Query: 464 DLEDHAEELMVDLDP-------------SKADPKKIPTPPPK--KRTAISILDGKSRLVE 508
+L + A + +++LDP +KA + K K IS G SR E
Sbjct: 541 ELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRF-E 599
Query: 509 FRNPT---LYRDD---------EKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
N L D EKL + ++++K Y P+T +L D+++E K++ +L+H
Sbjct: 600 LNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWH 659
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
SE+LA+ YGL+ + +RIIKNLRVC DCH IK+ S++ RE++VRD RFHH+KDG
Sbjct: 660 SEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDG 719
Query: 616 KCSCGDYW 623
CSC DYW
Sbjct: 720 VCSCKDYW 727
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 40/242 (16%)
Query: 257 CQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
CQ G +A+ L ++ V+ D T+ CG K +HD+ +++ I D
Sbjct: 199 CQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDP 258
Query: 313 VLNNKVIEMYGKCGSM-------------------------------TDARRVFDHMADR 341
L + ++ MY CGSM +AR VF+ M +
Sbjct: 259 HLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKK 318
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ W MI+GYA++ E L LF +M+ LG++P++ T L+V +AC A+++A +IH
Sbjct: 319 DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIH 378
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
K+ FG + + L+ + KCG L A++ + K+P + W + + +H
Sbjct: 379 LFVDKNGFGGALPINN--ALIEMYAKCGSLERARRIFD-KMPRKNVIS-WTCMISAFAMH 434
Query: 461 GD 462
GD
Sbjct: 435 GD 436
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ D F L + K ++H + D + ++ MY CG + +
Sbjct: 116 QGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAE 175
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR +FD M R + +W +MI+GY +GL ++ L LFE+M+ ++P+E V SACG
Sbjct: 176 ARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGR 235
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP 442
A + IH M++ + P + LV + CG + A E+ P
Sbjct: 236 AGNLSYGKMIHDFIMENNIVVDPHLQS--ALVTMYASCGSMDLALNLFEKMTP 286
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 219/388 (56%), Gaps = 37/388 (9%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+M KG + D T+ C + E +VH +++ + ++V+ + +++MY KCG
Sbjct: 651 MMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGK 710
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A R F+ M R++ SW+ MI+GYA +G G + L+LF QM++ G P+ TF+ V SA
Sbjct: 711 IDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSA 770
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C ++E F HF+SM + ++P EH+ +V +LG+ G + + ++FI + +P P A
Sbjct: 771 CSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFI-KTMPMNPNA 829
Query: 448 EFWEAL-----RNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKK 485
W + R +R + +L A +++++L+P A D ++
Sbjct: 830 LIWRTILGACCRANSR---NTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEE 886
Query: 486 ----IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKESTYVPD 535
+ KK S + K + F +P + +KLK +N+M++ YVP+
Sbjct: 887 ARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPE 946
Query: 536 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSR 595
T+Y L+D++ E KE+ L YHSE+LAIA+ +++ + P+RIIKNLRVCGDCH A K +S
Sbjct: 947 TKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRIIKNLRVCGDCHTAFKYISN 1005
Query: 596 IVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IV R++I+RD+ RFHHF G CSC DYW
Sbjct: 1006 IVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K +E+M G K + F + + E +++H L+ ++ D + N ++
Sbjct: 543 IKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAF 602
Query: 322 YGKCGSMTDARRVFDHMADRSMD-SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
YGKC M D +F M++R + SW+ MI+GY NG+ + + L M + G + ++ T
Sbjct: 603 YGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFT 662
Query: 381 FLAVFSACGSADAIEEAF-IHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
V SAC S +E +H ++++ E + G+ LV + KCG + A +F
Sbjct: 663 LATVLSACASVATLERGMEVHACAIRACLEAEVVVGS----ALVDMYAKCGKIDYASRFF 718
Query: 438 EQKLPFEPTAEFWEALRNYARIHG 461
E +P + + YAR HG
Sbjct: 719 EL-MPVRNIYSWNSMISGYAR-HG 740
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E+A ++H ++ + D+ N ++ ++ + G++ A+++FD M +++ SW +++GY
Sbjct: 56 EDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGY 115
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A NG+ DE LF + GL PN + AC
Sbjct: 116 AQNGMPDEACMLFRGIISAGLLPNHYAIGSALRAC 150
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 290 PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC-GSMTDARRVFDHMADRSMDSWHL 348
P + ++H +S D+VL+N ++ MY C S+ DARRVF+ + ++ SW+
Sbjct: 155 PNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNS 214
Query: 349 MINGYADNGLGDEGLQLFEQMRK----LGLQPNEQTFLAVFS-ACGSADA----IEEAFI 399
+I+ Y G +LF M++ L +PNE TF ++ + AC D +E+
Sbjct: 215 IISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA 274
Query: 400 HFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQ 439
E KS F + Y+G LV + G + A+ EQ
Sbjct: 275 RIE--KSSF----VKDLYVGSALVSGFARYGLIDSAKMIFEQ 310
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 297 KKVHDYFLQSTIRGDLVL-NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
++VH Y +++ + +L N ++ +Y KC ++ +AR +F M + SW+ +I+G
Sbjct: 374 QEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDH 433
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
N +E + F MR+ G+ P++ + ++ S+C S I
Sbjct: 434 NERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI 472
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + W +++H ++ + D+ ++N ++ +Y + M + ++VF M + SW
Sbjct: 466 CASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSW 525
Query: 347 HLMINGYADNGLGD-EGLQLFEQMRKLGLQPNEQTFLAV 384
+ I A + + ++ F +M + G +PN TF+ +
Sbjct: 526 NSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 202/382 (52%), Gaps = 32/382 (8%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV D + ++ +C K++H + + D+ + N +IEMY KCGS+ +
Sbjct: 570 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 629
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+ +VF M + + +W +I+ G G + ++ F +M G+ P+ F+A+ AC
Sbjct: 630 SFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 689
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+ +EE +F MK ++ I P EHY +V +L + L +A+ FI +P +P + W
Sbjct: 690 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFI-LSMPLKPDSSIW 748
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTP 489
AL + R+ GD ++ E +++L+P ++ K I
Sbjct: 749 GALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKAR 808
Query: 490 PPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQ--------MKESTYVPDTRYVLH 541
KK S ++ ++++ F T + E+ + +N+ M + Y+ + ++VLH
Sbjct: 809 GLKKDPGCSWMEIQNKVYVFGTGTKF--SEQFEEVNKLLGMLAGLMAKEGYIANLQFVLH 866
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
DID++ K L HSERLAIA+GL++T TPL+++KNLRVC DCH K +S+I REL
Sbjct: 867 DIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQREL 926
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFH FKDG CSCGDYW
Sbjct: 927 LVRDANRFHVFKDGACSCGDYW 948
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 256 LCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L G EA+ L + ++ D F ++ C +E AK +HD L D
Sbjct: 149 LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSD 208
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
L + N +I+MY + + AR+VF+ M R + SW+ +I+GY NG +E L+++ + R
Sbjct: 209 LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRN 268
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
LG+ P+ T +V ACG ++EE I + + GI GL+ + K L
Sbjct: 269 LGVVPDSYTMSSVLRACGGLGSVEEGDI-IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 327
Query: 432 EAQQFIEQKL 441
+ ++ ++ +
Sbjct: 328 DGRRIFDKMV 337
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 260 GKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+E+ + GV D+ ++ CG E +H + I+ D+++N
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY K + D RR+FD M R SW+ MI GY+ GL +E ++LF +M +
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 372
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P+ T ++ ACG +E ++H + S + + L+ + KCG+L +Q
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI--LINMYAKCGNLLASQ 430
Query: 435 Q 435
+
Sbjct: 431 E 431
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 244 QVLPPSVADLARLC---QEGKVKEAIELMDKGV---KADASCFYTLFELCGNPKWYENAK 297
VL +V+ +C Q G +E+I+L + V K D ++ + CG+ E K
Sbjct: 336 MVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGK 395
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
VHDY + S D +N +I MY KCG++ ++ VF M + SW+ MIN Y NG
Sbjct: 396 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 455
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEH 416
DE ++LF+ M K ++P+ T++ + S D +H + K F + +
Sbjct: 456 SFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSN 514
Query: 417 YLGLVGVLGKCGHLFEAQQFIE 438
LV + KCG + ++ + E
Sbjct: 515 --TLVDMYAKCGEMGDSLKVFE 534
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 8/209 (3%)
Query: 258 QEGKVKEAIEL---MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
Q G EA++L M VK D+ + L + K++H + ++V+
Sbjct: 453 QNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVV 512
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+N +++MY KCG M D+ +VF++M R + +W+ +I + + GL++ +MR G+
Sbjct: 513 SNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGV 572
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ T L++ C A + IH K G+ L+ + KCG L +
Sbjct: 573 TPDMATMLSILPVCSLLAAKRQGKEIHGCIFK--LGLESDVPVGNVLIEMYSKCGSLRNS 630
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGD 462
Q KL W AL + ++G+
Sbjct: 631 FQVF--KLMKTKDVVTWTALISACGMYGE 657
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADN 356
K+H + + ++ + K+I Y T + VF + ++ W+ +I N
Sbjct: 93 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
GL E L L+ + +++ LQP+ TF +V +AC E A IH + F G++
Sbjct: 153 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGF----GSD 208
Query: 416 HYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
Y+G L+ + + L +A++ E+ +P W +L
Sbjct: 209 LYIGNALIDMYCRFNDLDKARKVFEE-MPLRDVVS-WNSL 246
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 201/406 (49%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A LA Q G +EA+ E+ G+ + F L C + K +H +S
Sbjct: 301 AILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKS 360
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+++ N +I MY K GS+ A +VF M R +W MI G + +GLG E L +F
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M P+ TF+ V SAC +++E F + + + GI PG EHY +VG+L K
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK 480
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G L EA+ F++ P + W L + +H + L EL++ +DP +
Sbjct: 481 AGRLDEAENFMKST-PVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYIL 539
Query: 487 PT---PPPKKRTAISILDGKSR-----------LVEFRNPT---------------LYRD 517
+ K+ + + R +E RN +Y
Sbjct: 540 LSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEK 599
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
++L L ++ YVPD V HD++ E K + + YHSE+LAIAYGL+ TP+ P+R+I
Sbjct: 600 VQEL--LTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVI 657
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH+A+K++S++ R +IVRD RFH F DG CSC DYW
Sbjct: 658 KNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 256 LCQEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L + G EA+E++D+ V D + T F LC + K +VH ++ D
Sbjct: 205 LLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYD 264
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+++ +I+MYGKCG++ +AR+VF+ + +++ SW ++ Y+ NG +E L F +M
Sbjct: 265 SFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEV 324
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF 408
GL PNE TF + ++C A+ +H KS F
Sbjct: 325 DGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGF 362
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQS--TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
L ++ + K + K +H + + + + ++V N +I +Y KC + AR +FD M
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF- 398
R++ SW ++ GY NGL E L+LF+ M + ++PNE F + S+C + + E +
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 399 IHFESMKS 406
H ++KS
Sbjct: 151 CHGYALKS 158
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 228 QLNNVPNNMNQCPAGDQVLPPSV--------------ADLARLCQEGKVKEAIELMDKGV 273
Q+N++ N +C DQ++ + A +A G V E + L +
Sbjct: 64 QVNSLINLYAKC---DQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120
Query: 274 KADAS-----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSM 328
D F T+ C + + H Y L+S + + N +I MY + +
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A V+ + + S++++ING +NG E L++ ++M + + T++ F C
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC 240
Query: 389 GSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ +H ++ G + ++ + GKCG++ A++
Sbjct: 241 SHLKDLRLGLQVHCRMFRT--GAEYDSFVSSAIIDMYGKCGNILNARK 286
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 207/402 (51%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ L QE KEAIEL +G+ AD + CG + AK +H Y + I
Sbjct: 445 IGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDI 504
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ L +++M+ +CG A +VF+ M R + +W I A G G ++LF++
Sbjct: 505 HFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDE 564
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + G++P+ F+A+ +A +E+ + F SMK +GI+P HY +V +LG+ G
Sbjct: 565 MLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAG 624
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------- 481
L EA I + EP W +L R+H ++D+ +A E + +LDP +
Sbjct: 625 LLSEALSLI-NSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLS 683
Query: 482 ----------DPKKIPTPPPKKRT----AISILDGKSRLVEFRN-----PTLYRDDEKLK 522
D K+ +K S ++ ++ EF P + + LK
Sbjct: 684 NIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLK 743
Query: 523 AL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+ ++++ YVPD VL D++++ KE L HSE+LAIA+ LIST P+R+ KNLR
Sbjct: 744 EICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLR 803
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+C DCH+ K++S+ RE+IVRDN RFH F+ G CSCGDYW
Sbjct: 804 ICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+LM G D F + C +VH ++ D+ + N +I YG+CG
Sbjct: 129 QLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECG 188
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ RRVFD M++R++ SW +I GYA G E + LF +M ++G++PN T + V S
Sbjct: 189 EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVIS 248
Query: 387 ACG 389
AC
Sbjct: 249 ACA 251
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 72/140 (51%)
Query: 255 RLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
R C + V E+++ G++ ++ + C + + ++V + + + ++
Sbjct: 218 RGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALM 277
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +++MY KCG++ AR++FD D+++ ++ +++ Y GL E L + +M K G
Sbjct: 278 VNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP 337
Query: 375 QPNEQTFLAVFSACGSADAI 394
+P+ T L+ SAC D +
Sbjct: 338 RPDRITMLSAVSACSELDDV 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 46/264 (17%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKW 292
++C + VL ++ ++ ++G +E + E++ G + D + C
Sbjct: 299 DECVDKNLVLYNTI--MSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDD 356
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
K H Y L++ + G + N +I MY KCG A RVFD M +++ SW+ +I G
Sbjct: 357 VSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAG 416
Query: 353 YADNG-------------------------------LGDEGLQLFEQMRKLGLQPNEQTF 381
+ NG + E ++LF M+ G+ ++ T
Sbjct: 417 FVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTM 476
Query: 382 LAVFSACGSADAIEEA-FIHFESMKSE--FGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ V SACG A++ A +IH K + F + GT LV + +CG A Q
Sbjct: 477 VGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGT----ALVDMFARCGDPQSAMQVFN 532
Query: 439 QKLPFEPTAEFWEALRNYARIHGD 462
+ + + +A W A + G+
Sbjct: 533 KMVKRDVSA--WTAAIGAMAMEGN 554
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSE 407
+I G++ GLG + + +F Q+ +G P+ TF V SAC + A+ E F +H +K
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMG 169
Query: 408 FGISPGTEHYLGLVGVLGKCGHL 430
F E+ L+ G+CG +
Sbjct: 170 FERDMFVEN--SLIHFYGECGEI 190
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 200/381 (52%), Gaps = 32/381 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D + L C + A+ +H Y + D+++ ++ +Y K G + +
Sbjct: 260 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 319
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+F+ + DR +W M+ GYA + G E ++LF+ M K G++ + TF + SAC +
Sbjct: 320 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 379
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+EE +FE M + + P +HY +V +LG+ G L +A + I + +P EP++ W
Sbjct: 380 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELI-KSMPMEPSSGVWG 438
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKKIPTPPPKKR 494
AL R++G+++L E ++ LDPS D K+ ++R
Sbjct: 439 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERR 498
Query: 495 T----AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHD 542
S ++ +++ F R+ ++ E+L + +++E+ P T +VLHD
Sbjct: 499 LTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEEL--IRKIREAGCAPKTEFVLHD 556
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
ID+E K + HSE+LAIA+GL+ T + PL I KNLR+CGDCH+ K S + R +I
Sbjct: 557 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 616
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD+KRFHHF DG CSC DYW
Sbjct: 617 IRDSKRFHHFADGLCSCRDYW 637
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++S D + ++++ MY K G DA+R+FD M ++ + SW+ +++G + G
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143
Query: 359 GDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
L F +MR + G QPNE T L+V SAC A++E + + G+S +
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG-KSLHGVVVKLGMSGKAKVV 202
Query: 418 LGLVGVLGKCGHLFEAQQFIEQ 439
L+ + GK G L A Q E+
Sbjct: 203 NSLINMYGKLGFLDAASQLFEE 224
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++ C + + K +H ++ + G + N +I MYGK G + A ++F+ M
Sbjct: 167 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 226
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS------ADA 393
RS+ SW+ M+ + NG ++G+ LF M++ G+ P++ T +A+ AC A++
Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
I A+IH ++ I+ + +G L +FE
Sbjct: 287 I-HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 324
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 199/380 (52%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V A + + C + + +A++ H + D VL ++ MY + G++ AR
Sbjct: 419 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESAR 478
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD M+ R +W +I GYA +G L L+++M G +P+E TF+ V AC A
Sbjct: 479 QVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAG 538
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
E+ F S++S++ + P HY ++ +L + G L +A++ I +P EP W +
Sbjct: 539 LQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELI-NAMPVEPNDVTWSS 597
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKK-----------------------IPTP 489
L +RIH D+ HA + LDP DP +
Sbjct: 598 LLGASRIHKDVKRATHAAGQITKLDP--VDPASYVLLSNVHAVTGNLAGMASVRNTMVAR 655
Query: 490 PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
KKR S ++ ++ EF +P +L+ L+ ++KE+ YVP++ VLHD+
Sbjct: 656 GVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDV 715
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++ KE L HSE+LAIA+GLI+T T LRI LR+C DCH+A+K +S I RE+IV
Sbjct: 716 GEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIV 775
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD+ RFH F+DG+CSCGDYW
Sbjct: 776 RDSSRFHKFRDGQCSCGDYW 795
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 21/227 (9%)
Query: 253 LARLCQEGKVKEAIELMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRG 310
L Q G + A++L + ++ + + T+ C + K E K +H + ++
Sbjct: 96 LTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKL 155
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D++L N ++ MY KCGS+ DA+R+F+ M+ RS+ SW+ MI YA +G +E ++L+E M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM- 214
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL----GLVGVLG 425
++P+ +TF +V SAC + +++ IH ++ S S GTE L L+ +
Sbjct: 215 --DVEPSVRTFTSVLSACSNLGLLDQGRKIH--ALIS----SRGTELDLSLQNALLTMYA 266
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEEL 472
+C L +A + I Q+LP + + +A + DL D A E
Sbjct: 267 RCKCLDDAAK-IFQRLPRRDVVSWSAMIAAFA----ETDLFDEAIEF 308
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 251 ADLARLCQEGKVKEAIELM-DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
A +A Q G +EAI L D V+ F ++ C N + +K+H
Sbjct: 193 AMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTE 252
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DL L N ++ MY +C + DA ++F + R + SW MI +A+ L DE ++ + +M
Sbjct: 253 LDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKM 312
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVGVLGK 426
+ G++PN TF +V AC S + +H + + + + I+ GT LV +
Sbjct: 313 QLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT----ALVDLYTS 368
Query: 427 CGHLFEAQQFIEQ 439
G L EA+ +Q
Sbjct: 369 YGSLDEARSLFDQ 381
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E+ +++HD + ++ L N+++ YGKCGS+ AR FD +A ++ SW M+ Y
Sbjct: 41 ESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAY 99
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A NG L L+++M LQPN + V AC S A+EE + G+
Sbjct: 100 AQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLD 156
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQK------------LPFEPTAEFWEALRNYARIHG 461
L+ + KCG L +A++ E+ + + F EA+R Y
Sbjct: 157 VILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYE---- 212
Query: 462 DIDLE 466
D+D+E
Sbjct: 213 DMDVE 217
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 21/247 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + EAIE K GV+ + F ++ C + + VHD L +
Sbjct: 291 AMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN 350
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ LV ++++Y GS+ +AR +FD + +R W ++I GY+ G L+L+
Sbjct: 351 GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELY 410
Query: 367 EQMRKLGLQPNEQTFLA-VFSACGSADAIEEAF-----IHFESMKSEFGISPGTEHYLGL 420
+M+ P + + V SAC S A +A I + M S+F ++ L
Sbjct: 411 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT------SL 464
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK 480
V + + G+L A+Q + K+ T + + YA+ HG+ L A L +++
Sbjct: 465 VNMYSRWGNLESARQVFD-KMSSRDTLAWTTLIAGYAK-HGEHGL---ALGLYKEMELEG 519
Query: 481 ADPKKIP 487
A+P ++
Sbjct: 520 AEPSELT 526
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 197/380 (51%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+ D T+ C N E K++H Y + +R D + + +I+MY K GS+ DA
Sbjct: 379 IVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDAL 438
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+F+ + + ++ W MI+G A +G G E + LFE M LG+ PNE TF+ V +AC
Sbjct: 439 MIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVG 498
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
IEE +F MK + I+P EHY +V + G+ GHL EA+ FI + W +
Sbjct: 499 LIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFEN-SISHFTSVWRS 557
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---------------------PPP 491
+ R+H + ++ E+++ PS D + +
Sbjct: 558 FLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGV 617
Query: 492 KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
KK+ S + K ++ F ++ +Y + L + ++KE Y D + V+ D+
Sbjct: 618 KKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSL--IGRLKEIGYSLDAKLVMQDV 675
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++E E + +HSE+LA+ + +I+T RTP+RI+KNLR+C DCHN K S+++ RE+IV
Sbjct: 676 EEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIV 735
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD RFHHFK CSCG+YW
Sbjct: 736 RDTHRFHHFKQSSCSCGEYW 755
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYEN 295
P D V ++ D L Q G + A+E ++ G + F L + E
Sbjct: 227 PNKDVVSWNTIID--GLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEV 284
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM----------------A 339
+++H L + D + + ++EMYGKCG M A + +
Sbjct: 285 GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEP 344
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
M SW M++GY NG ++G++ F M + + +T + SAC +A +E
Sbjct: 345 KARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQ 404
Query: 399 IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
IH K I + Y+G L+ + K G L +A EQ EP W ++ +
Sbjct: 405 IHAYIQK----IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ--IKEPNVVLWTSMISG 458
Query: 457 ARIHG 461
+HG
Sbjct: 459 CALHG 463
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 264 EAIELMDKGVKADASC-----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E + + + ++AD +C ++ + C + K +H + L++ + GD+VL N +
Sbjct: 116 ELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSI 175
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+++Y KC A F+ M ++ + SW++MI Y G ++ L++F
Sbjct: 176 LDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMF 223
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 297 KKVHDYFLQSTIRGDL-VLN--NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ +H ++ + +G L +LN N ++ +Y K ++ A ++FD + ++ +W ++I+G+
Sbjct: 52 RALHGHYFK---KGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGF 108
Query: 354 A-DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGIS 411
A G + LF +M+ G PN+ T +V C + I+ IH +++ G
Sbjct: 109 ARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGD 168
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
E+ ++ + KC A+ F E L E W + GD++
Sbjct: 169 VVLEN--SILDLYLKCKEFEYAESFFE--LMIEKDVVSWNIMIGAYLREGDVE 217
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 210/397 (52%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ AI + + VK +L C + + + +H Y ++ D+V
Sbjct: 182 QCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVV 241
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+MY KCG++ A VF ++ +++ W+ +I G NG G+E + F M K G
Sbjct: 242 LGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEG 301
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ TF+ + S C + + +F M +G+ PG EHY +V +LG+ G+L EA
Sbjct: 302 IKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEA 361
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+ I + +P +P + +L +IH D L + + +++LDP
Sbjct: 362 LELI-RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYAS 420
Query: 479 -SKADPKKIPTPPPKKRTA-----ISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQ 526
S+ D KR S ++ + + EF +P + + L + +
Sbjct: 421 LSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKE 480
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K +VP+T VLHDI++E KE A+ YHSER+A+A+GL+STP +R++KNLR C DC
Sbjct: 481 LKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDC 540
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A+K++S RE+IVRD KRFHHF++G CSC DYW
Sbjct: 541 HSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQM 369
D+V N +I+ Y K + A+ +F M R+ +W+ MI+ Y G + +F+QM
Sbjct: 137 DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQM 196
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGK 426
+ ++P E T +++ SAC A++ +IH + + + + G L+ + K
Sbjct: 197 QSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGN----ALIDMYCK 252
Query: 427 CGHL 430
CG L
Sbjct: 253 CGAL 256
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
R D+V NN +I K G + +AR +FD+M +R+ SW+ MI Y LGD
Sbjct: 73 RRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCK--LGD 122
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y K G + AR +FD + + SW+ +I+GY + +LF M
Sbjct: 111 NSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNS 170
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
T ++ + CG A F+ M+SE + P TE + +V +L C HL
Sbjct: 171 VTWNTMISAYVQCGE---FGTAISMFQQMQSE-NVKP-TE--VTMVSLLSACAHL 218
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 204/397 (51%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ +A+E+ D+ G++ + + C ++VH + QS I D
Sbjct: 204 KAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSGITMDEK 263
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L V++MY KCGS+ +A VF + + + SW+ MI G A +G + ++LF +M +
Sbjct: 264 LATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMERED 323
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P++ T + V +AC + + +F + +GI P EHY +V + G+ G L EA
Sbjct: 324 VAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEA 383
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------ 481
++ I+ +P EP AL +IH D+DL + +++LDP +
Sbjct: 384 KKVIDD-MPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLANLLAS 442
Query: 482 -----DPKKIPTPPPK----KRTAISILDGKSRLVEFRNPTLYRDDEK--LKALNQMKES 530
D K+ + K S+++ + EF+ +L EK A+ M
Sbjct: 443 AGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVKDMMRK 502
Query: 531 T----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
Y+PDT VLHDI +E KE L YHSE+LAIA+GL+ T +RI KNLRVC DC
Sbjct: 503 IRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRITKNLRVCRDC 562
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K +SR+ RE++VRD RFHHFKDG CSC DYW
Sbjct: 563 HEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 310 GDLVLNNKVIEMYGKC--GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
GDL + + + G C G + DAR++FD M +R++ SW+ MI+GY G + L++F+
Sbjct: 157 GDLDVVSWTTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFD 216
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGK 426
QMR LG++ N + AC A + +H +S GI+ + +V + K
Sbjct: 217 QMRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQS--GITMDEKLATAVVDMYCK 274
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
CG + EA + + LP + W + +HG
Sbjct: 275 CGSVEEAWH-VFKVLPTKGLTS-WNCMIGGLAVHG 307
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 206/384 (53%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+M V + S F + C + E + +H ++ + + N ++ MY KCG
Sbjct: 345 EMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCG 404
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ DA VF + ++++ SW+ +I G A +G G L LF++M + G++ +E T + S
Sbjct: 405 FIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLS 464
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + +++A F + + EHY +V VLG+CG + EA+ + +P E
Sbjct: 465 ACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEA-LATSMPVEAN 523
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---PPPKKRTAISILDGK 503
+ W L + R+H +D+ + A + + +++P + + + ++ ++ + K
Sbjct: 524 SMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMK 583
Query: 504 SR--------------LVEFRNPTLYRDD---------EKLKALN-QMKESTYVPDTRYV 539
+ L R+ L D EKL L +++E Y+PD ++
Sbjct: 584 MKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFA 643
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LHD++ E E+ L YHSERLAIA+GL+ST + + I+KNLRVCGDCH AI +M++IV R
Sbjct: 644 LHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNR 703
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD+ RFHHFK+G CSCGDYW
Sbjct: 704 EIVVRDSSRFHHFKNGICSCGDYW 727
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D ++ ++ Y C M DA +VF +++ W ++ G N E L++F +M
Sbjct: 288 DEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMM 347
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEH--YLG--LVGVLG 425
+ + PNE +F + ++C + +E+ IH GI G E+ Y G LV +
Sbjct: 348 RFNVVPNESSFTSALNSCVGLEDLEKGRVIH------AAGIKMGLENAVYTGNSLVVMYS 401
Query: 426 KCGHLFEA 433
KCG + +A
Sbjct: 402 KCGFIGDA 409
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNGLGDEGLQLFEQM---- 369
+I + G + +A R F+ M D+ + +W+ M+NGY +NG ++ L+LF QM
Sbjct: 156 TTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRD 215
Query: 370 ------RKLGLQPNEQTFLAVF 385
+GL N +++ A+F
Sbjct: 216 VISWTSIIVGLDRNGKSYQALF 237
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 211/397 (53%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ AI + + VK +L C + + + +H Y ++ D+V
Sbjct: 110 QCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVV 169
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+MY KCG++ A VF ++ +++ W+ +I G NG G+E + F M K G
Sbjct: 170 LGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEG 229
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ TF+ + S C + + +F M +G+ PG EHY +V +LG+ G+L EA
Sbjct: 230 IKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEA 289
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
+ I + +P +P + +L +IH D L + + +++LDP
Sbjct: 290 LELI-RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYAS 348
Query: 479 -SKADP-----KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQ 526
S+ D K + K S ++ + + EF +P + + L + +
Sbjct: 349 LSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKE 408
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K +VP+T VLHDI++E KE A+ YHSER+A+A+GL+STP +R++KNLR C DC
Sbjct: 409 LKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDC 468
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A+K++S RE+IVRD KRFHHF++G CSC DYW
Sbjct: 469 HSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F + C + + H ++ D++L +++ Y K G + +AR +FD+M
Sbjct: 33 FSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMT 92
Query: 340 DRSMDS--WHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+R+ +S W+ MI+ Y G + +F+QM+ ++P E T +++ SAC A++
Sbjct: 93 ERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMG 152
Query: 398 -FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+IH + + + + G L+ + KCG L
Sbjct: 153 EWIHGYIRTKRLKIDVVLGN----ALIDMYCKCGAL 184
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 199/380 (52%), Gaps = 32/380 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V A + + C + + +A++ H + D VL ++ MY + G++ AR
Sbjct: 420 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESAR 479
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD M+ R +W +I GYA +G L L+++M G +P+E TF+ V AC A
Sbjct: 480 QVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAG 539
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
E+ F S++S++ + P HY ++ +L + G L +A++ I +P EP W +
Sbjct: 540 LQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELI-NAMPVEPNDVTWSS 598
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADPKK-----------------------IPTP 489
L +RIH D+ HA + LDP DP +
Sbjct: 599 LLGASRIHKDVKRATHAAGQITKLDP--VDPASYVLLSNVHAVTGNLAGMASVRNTMVAR 656
Query: 490 PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDI 543
KKR S ++ ++ EF +P +L+ L+ ++KE+ YVP++ VLHD+
Sbjct: 657 GVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDV 716
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
++ KE L HSE+LAIA+GLI+T T LRI LR+C DCH+A+K +S I RE+IV
Sbjct: 717 GEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIV 776
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD+ RFH F+DG+CSCGDYW
Sbjct: 777 RDSSRFHKFRDGQCSCGDYW 796
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 251 ADLARLCQEGKVKEAIELM-DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
A +A Q G +EAI L D V+ F ++ C N + +K+H
Sbjct: 194 AMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTE 253
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DL L N ++ MY +C + DA ++F + R + SW MI +A+ L DE ++ + +M
Sbjct: 254 LDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKM 313
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP--GTEHYLGLVGVLGK 426
+ G++PN TF +V AC S + +H + + + + I+ GT LV +
Sbjct: 314 QLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT----ALVDLYTS 369
Query: 427 CGHLFEAQQFIEQ 439
G L EA+ +Q
Sbjct: 370 YGSLDEARSLFDQ 382
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E+ +++HD + ++ L N+++ YGKCGS+ AR FD +A ++ SW M+ Y
Sbjct: 41 ESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAY 99
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
A NG L L+++M LQPN + V AC S +A+EE + G+
Sbjct: 100 AQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLD 156
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL-RNYA---------RIHGDI 463
L+ + KCG L +A++ E ++ + W A+ YA R++ D+
Sbjct: 157 VILENSLLTMYAKCGSLEDAKRLFE-RMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
Query: 464 DLE 466
D+E
Sbjct: 216 DVE 218
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 21/247 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + EAIE K GV+ + F ++ C + + VHD L +
Sbjct: 292 AMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN 351
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ LV ++++Y GS+ +AR +FD + +R W ++I GY+ G L+L+
Sbjct: 352 GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELY 411
Query: 367 EQMRKLGLQPNEQTFLA-VFSACGSADAIEEAF-----IHFESMKSEFGISPGTEHYLGL 420
+M+ P + + V SAC S A +A I + M S+F ++ L
Sbjct: 412 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT------SL 465
Query: 421 VGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK 480
V + + G+L A+Q + K+ T + + YA+ HG+ L A L +++
Sbjct: 466 VNMYSRWGNLESARQVFD-KMSSRDTLAWTTLIAGYAK-HGEHGL---ALGLYKEMELEG 520
Query: 481 ADPKKIP 487
A+P ++
Sbjct: 521 AEPSELT 527
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 205/372 (55%), Gaps = 36/372 (9%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ + C + + K+VH + ++ + +++MY KCG + +A F +
Sbjct: 3 VLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHD 62
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFE 402
SW M+ +A +G D L F++M++ G +PN TF+ + SAC +EE +F+
Sbjct: 63 TVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFD 122
Query: 403 SMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
M + +GI+P +HY +V +LG+ G+L EA+ F+ ++P P A ++L + R + D
Sbjct: 123 LMTARYGIAPDAQHYACMVDLLGRAGYLDEAEGFL-NRMPGAPHAAVLKSLLSACRSYKD 181
Query: 463 IDLEDHAEELMVDLDPSKADPKKIPTP----------PPKKRTAI-----------SILD 501
+D + + M++ ++ P + + R+ + S ++
Sbjct: 182 VDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIE 241
Query: 502 GKSRLVEF---------RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQA 551
+ R+ EF NP KL+ L+ MK++ YVPDT VLHD+ +E KEQ
Sbjct: 242 VEGRVFEFVAGDMSHVQMNPI----RAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQV 297
Query: 552 LLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHH 611
LL+HSE+LA+A+GL++TPA +P+R+IKNLRVC DCH+A K++S I R ++ RD RFHH
Sbjct: 298 LLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHH 357
Query: 612 FKDGKCSCGDYW 623
F++G CSCGDYW
Sbjct: 358 FENGVCSCGDYW 369
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 195/357 (54%), Gaps = 28/357 (7%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E + +H Y L+ + L + + ++ MY +CG + +RVFD M R + SW+ +I+ Y
Sbjct: 295 EQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSY 354
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+G G + + +FE+M G++P+ +F++V AC A ++E + F SM GI P
Sbjct: 355 GVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPS 414
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY +V +LG+ L EA + IE + EP + W +L RIH +++L + A +
Sbjct: 415 VEHYACMVDLLGRANRLEEAAKIIEN-MRIEPGPKVWGSLLGSCRIHCNVELAERASIRL 473
Query: 474 VDLDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRLVEF--- 509
DL+P+ A K + +K S ++ K ++ F
Sbjct: 474 FDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSV 533
Query: 510 --RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
NP + + L L+ ++KE YVP T+ VL+D+ KE+ +L HSE+LA+A+GLI
Sbjct: 534 DEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLI 593
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++ +RI K+LR+C DCH+ K +S+ +E++VRD RFHHF+DG CSCGDYW
Sbjct: 594 NSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 71/138 (51%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
LC++G + +A+EL+ + L C + +A++VH + L++ D L
Sbjct: 49 LCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLA 108
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
K+I MY S+ +AR+VFD +R++ ++ + + G G+E L ++ +M +G+
Sbjct: 109 TKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIP 168
Query: 376 PNEQTFLAVFSACGSADA 393
+ T+ V AC +++
Sbjct: 169 SDRFTYTYVLKACVASEC 186
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 277 ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD 336
+ CF +L +++H + L+ G + + +++MY K G +++A VF+
Sbjct: 184 SECFVSLLN---------KGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFN 234
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQ--MRKLGLQPNEQTFLAVFSACGSADAI 394
M +++ SW MI YA NG E L+LF + + L PN T ++V AC + A+
Sbjct: 235 QMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAAL 294
Query: 395 EEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
E+ IH ++ G+ LV + +CG L Q+ +Q + + W +L
Sbjct: 295 EQGRLIHGYILRK--GLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVS--WNSL 350
Query: 454 RNYARIHG 461
+ +HG
Sbjct: 351 ISSYGVHG 358
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 206/386 (53%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ KG+ ++ C + + +HDY + + + ++ +++MY KCG
Sbjct: 224 EMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCG 283
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ DA VF M R +W +MI YA++G G E + LFE+M+K G++P++ TFL +
Sbjct: 284 SLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLY 343
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC + + E +F+ MK + GI PG +HY + +L + G L A +FI++ LP PT
Sbjct: 344 ACSHSGLVSEGLRYFDDMK-DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDE-LPINPT 401
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KK 485
W L + HGD++L E +++LD S K
Sbjct: 402 PILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKL 461
Query: 486 IPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKL--KALNQMKESTYVPDTRY 538
+ K S ++ + + EF R+P ++ K+ + ++Q+K Y+PDT +
Sbjct: 462 MSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPK-SQEARKMVDEVIDQLKLVGYIPDTSH 520
Query: 539 VLH-DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
V H ++ +E K +L YHSE+LAIA+GL++T LR++KNLRVC DCH+ K +S +
Sbjct: 521 VFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVF 580
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
R +I+RD RFHHF+ G CSCGDYW
Sbjct: 581 NRRIILRDLNRFHHFERGICSCGDYW 606
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
V+ + ++++GV D F +L + C + E+ ++ H ++ G + +I M
Sbjct: 118 VRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINM 177
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y +CG AR F + S++ MI + E L LF +M+ GL P T
Sbjct: 178 YAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTV 237
Query: 382 LAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++V SAC A++ ++H + G+ + LV + KCG L +A
Sbjct: 238 ISVLSACALLGALQLGRWLH--DYVRKLGLGSLVKVSTALVDMYAKCGSLEDA 288
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 201/378 (53%), Gaps = 32/378 (8%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D+ F C + ++V + + + L + ++ MY +CG + ARR F
Sbjct: 205 DSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCGVVDKARRWF 264
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
D + +R++ +W MI GY +G G E ++LF MR G PN TF+AV SAC A +
Sbjct: 265 DALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLSACAHAGLVM 324
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRN 455
E F MK +G+ P EHY +V + G+ G L EA QFI +P EP E W A+
Sbjct: 325 EGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEPGPEVWTAVLG 384
Query: 456 YARIHGDIDLEDHAEELMVDLDPSKAD-----------------PKKIPTPPPKKRTAIS 498
++H + +L E ++ L+P +K+ K+R
Sbjct: 385 ACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMHHVEKVRNTMIKRRLKKQ 444
Query: 499 I------LDGKSRLVEF------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQE 546
I L G S L + +Y E+L ++++ + Y+P+T VLH++++E
Sbjct: 445 IGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEEL--IHRITAAGYMPETESVLHELEEE 502
Query: 547 AKEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
+E AL YHSE+LA+AYGL+ S + TP+R+IKNLR+CGDCH AIK MS + RE++VRD
Sbjct: 503 EREGALRYHSEKLAVAYGLMMSVGSTTPIRVIKNLRICGDCHLAIKFMSAVENREIVVRD 562
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFHHFKDGKCSC +YW
Sbjct: 563 KHRFHHFKDGKCSCLEYW 580
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ + + F + + C + +H + + D + ++ +Y KCG
Sbjct: 96 LLSAALPFSSFTFTAVAKACADLSALRTGAAIHAHSILLGFGSDRFVLTALVVLYSKCGQ 155
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ AR++FD + DRS+ +W+ MI+GY NGL + G+ ++++M+ P+ TF+A SA
Sbjct: 156 LGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVYKEMQAAKAVPDSMTFVATLSA 215
Query: 388 CGSADAIE---EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
C A A++ E S + + + G+ LV + +CG + +A+++ + E
Sbjct: 216 CAQAGALDLGREVERRVVSERMDISVFLGS----ALVNMYARCGVVDKARRWFDALQ--E 269
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDG 502
W ++ +HG H E + + + PPP T +++L
Sbjct: 270 RNVVTWTSMIAGYGMHG------HGREAIKLFHLMRCE-----GPPPNHVTFVAVLSA 316
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 209/404 (51%), Gaps = 35/404 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ L + G +EA+ L K ++ D + C + K +H + I
Sbjct: 286 LSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 345
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DLVL +++MY KCGS+ A +VF M R++ +W+ +I G A +G G++ + LF+Q
Sbjct: 346 NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQ 405
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M L P++ TF+A+ AC A ++E F++MK++F I P EHY +V +L +
Sbjct: 406 MEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRAR 465
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
+ +A FIE +P + + W L R G DL + +++L+P
Sbjct: 466 KVDDALAFIEN-MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLS 524
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDE 519
K++ +K S ++ + +F + +Y E
Sbjct: 525 NLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 584
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ + + +VP T VL DI++E KE +L HSE+LAIA GLISTP+ +P+RI+KN
Sbjct: 585 EMTRRVNL-DGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKN 643
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH+ +K+ S++ RE++ RD RFHHFK+G CSC D+W
Sbjct: 644 LRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 259 EGKVKEAIELMDKGVKAD-----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+G ++A +L+D+ K D +L C E K +H Y + + +L
Sbjct: 190 KGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLR 249
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+NN +++MY KC + A+ VF+ + ++ + SW M++G A +G E L LF++M+
Sbjct: 250 VNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNK 309
Query: 374 LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL-F 431
++ +E T + V SAC A+++ +IH + +F I+ LV + KCG +
Sbjct: 310 IELDEITLVGVLSACAQTGALDQGKYIHL--LIDKFEINCDLVLETALVDMYAKCGSIDL 367
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
Q F ++ T W AL +HG
Sbjct: 368 ALQVFRRMRVRNVFT---WNALIGGLAMHG 394
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++++GV D + + C + ++ H L++ DL + N +I+ Y CGS
Sbjct: 102 MVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGS 161
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFS 386
A VFD R + +W++MIN + + GL ++ L ++M KL L+P+E T +++
Sbjct: 162 FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVP 221
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
AC +E F+H S E G+ ++ + KC + AQ+
Sbjct: 222 ACAQLGNLERGKFLH--SYSKELGLDENLRVNNAILDMYCKCDDIESAQE 269
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 203/392 (51%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EG ++ + GV AD F + C + +++H +++ + + + +
Sbjct: 318 EGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCL 377
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY +CG + D+ RVF MI+ Y +G G + ++LF+QM G +P++
Sbjct: 378 VHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSD 437
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TFLA+ AC + EE FE M +G+ P +HY +V +LG+ G L EA+ I
Sbjct: 438 VTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALI- 496
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+P P W+ L + + + D+ + + +++LDP +
Sbjct: 497 LSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWG 556
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKEST 531
K + +K +S ++ K + +F +P DE L+ + ++++
Sbjct: 557 DVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCG 616
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y PD VLHD++ E KE +L +HSE+LAIA+ +S P P+R++KNLRVC DCH AIK
Sbjct: 617 YSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIK 676
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+MS++ GRE++VRD RFHHFKDG+CSC DYW
Sbjct: 677 LMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ +G+ D ++F C + ++VH Y ++S + D+ + + + MY +C
Sbjct: 224 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 283
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + + V + S+ S + +I G NG + L+ F MR +G+ + TF++
Sbjct: 284 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 343
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
S+C A+ + IH + MK+ G+ LV + +CG L ++++
Sbjct: 344 SSCSDLAALAQGQQIHGQVMKA--GVDKVVPVMTCLVHMYSRCGCLGDSER 392
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 252 DLARLCQEGKVKEAIELMDKGVK-ADASCFYT-LFELCGNPKWYENAKKVHDYFLQSTIR 309
+ RLC G++++A+ +GV +DA+ ++ LF C + +++H + S
Sbjct: 79 EFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRAC---RALRPLRQLHAFAATSGAA 135
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG-LG--------- 359
D N ++ Y G +T AR +F+ + R++ SW+++ GY NG LG
Sbjct: 136 TDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEM 195
Query: 360 ---------------------DEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIEEA 397
+E L F MR+ G+ P+E +VF C G D +
Sbjct: 196 PERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGR 255
Query: 398 FIHFESMKS 406
+H ++S
Sbjct: 256 QVHAYVVRS 264
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 208/401 (51%), Gaps = 36/401 (8%)
Query: 258 QEGKVKEAIELMDKGV------KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G ++A+ L D+ + K + ++ C E +++HD+ + +
Sbjct: 216 QNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLN 275
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ + MY KC S+ +AR FD +A +++ +W+ MI YA +G G E + +FE M
Sbjct: 276 SSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENM 335
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ G+QP+ TF+ + S C + I+ HF M + + P EHY +V +LG+ G
Sbjct: 336 LRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGR 395
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------- 481
L EA++ I Q +P + W AL R H ++++ + A + L+P +
Sbjct: 396 LVEAKELISQ-MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSN 454
Query: 482 ---------DPKKIPTPPP----KKRTAISILD--GKSRLVEFRNPTLYRDDEKLKALN- 525
+ KK+ KK S ++ GKS L + + + E K L
Sbjct: 455 LYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEA 514
Query: 526 ---QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
++K + Y+PDT +VLHDI +E KE L HSE+LAIA+GL++T LR+ KNLR+
Sbjct: 515 LPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRI 574
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CGDCH A K +S+I RE+IVRD RFH FKDG CSCGDYW
Sbjct: 575 CGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 34/172 (19%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH-------- 347
+ VH L+ + GD + +I+MY KCG + DAR++FD M R M SW+
Sbjct: 126 GRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMK 185
Query: 348 -----------------------LMINGYADNGLGDEGLQLFEQMRKLG--LQPNEQTFL 382
MI+GY NG ++ L LF++M + G ++PN T +
Sbjct: 186 EGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIV 245
Query: 383 AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+V AC + A+E + G+ + L G+ KC L EA+
Sbjct: 246 SVLPACAQSAALERGR-RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEAR 296
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 205/369 (55%), Gaps = 29/369 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-D 340
++ C ++ K VH Y ++ ++ D+VL +I+MY KCGS+ A+ +FD++ +
Sbjct: 200 SVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPE 259
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIH 400
+ + +W MI ++ +GL +E L+LF +M G++PN TF+AV AC + E +
Sbjct: 260 KDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEY 319
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
F+ M +E+G+SP +HY +V + + G + +A + + +P EP W AL N ARIH
Sbjct: 320 FKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVV-KSMPMEPDVMIWGALLNGARIH 378
Query: 461 GDIDLEDHAEELMVDLDPSKADPKKIPTPP---------------------PKKRTAISI 499
GD++ + A +++LDP+ + + + KK S+
Sbjct: 379 GDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSL 438
Query: 500 LDGKSRLVEF-----RNPTLYRDDEKL-KALNQMKESTYVPDTRYVLHDIDQEAKEQALL 553
++ + EF +P L L + + ++++ Y +T VL D+D+E KE AL
Sbjct: 439 VEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALS 498
Query: 554 YHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFK 613
HSE+LAIAY + T T +RI+KNLR+C DCH AIKI+S+ RE+IVRD RFHHFK
Sbjct: 499 LHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFK 558
Query: 614 DGKCSCGDY 622
+G CSC DY
Sbjct: 559 NGLCSCKDY 567
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
++ CG P + A++ D Q DL N +I K G + AR++FD M +++
Sbjct: 104 MYSSCGTPTF---ARQAFDEITQP----DLPSWNAIIHANAKAGMIHIARKLFDQMPEKN 156
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLG---LQPNEQTFLAVFSACGSADAIE---- 395
+ SW MI+GY G L LF ++ L L+PNE T +V SAC A++
Sbjct: 157 VISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKW 216
Query: 396 -EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
A+I MK + + GT L+ + KCG + A+ + P E W A+
Sbjct: 217 VHAYIDKTGMKID--VVLGTS----LIDMYAKCGSIERAKCIFDNLGP-EKDVMAWSAMI 269
Query: 455 NYARIHG 461
+HG
Sbjct: 270 TAFSMHG 276
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 215/401 (53%), Gaps = 37/401 (9%)
Query: 257 CQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C G+ +++ E+ GV+ L C + K++H + L+ D+
Sbjct: 421 CHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDM 480
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
V++ +I+MY K GS+ A+ +F+ + +++ + M+ G A +G G E ++LF M
Sbjct: 481 VVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNS 540
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL+P+ TF A+ +AC S + E + +F+ M++++G+ P TE+Y +V +L +CG+L E
Sbjct: 541 GLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDE 600
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEE--------------LMVDL-- 476
A FIE+ P +P A W AL IHG++ L + A LM++L
Sbjct: 601 AMDFIERS-PIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYE 659
Query: 477 -----DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D +++ + R S + + + F +Y +E ++
Sbjct: 660 YERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIY--EELIRL 717
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRV 582
+ Q+K++ YVPDT + +++ +E KE+ LL H+E+LAI YGLI S +R P+R++KN R+
Sbjct: 718 VFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRM 777
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH K +S + R++I+RD RFHHF DGKCSC DYW
Sbjct: 778 CNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 818
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ +EA+ ++ +G++ DA+ +L + N + ++H +FL++ + D+
Sbjct: 251 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 310
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++MY KCG + A++VFD + R++ +W+ ++ GYA+ G D L+L E M+K
Sbjct: 311 TGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNR 370
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
L P+ T+ + + +A + +K+ G++P + L+ G C
Sbjct: 371 LDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA-GVTPNVVSWTSLIS--GSC 421
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ VH Y L+ + ++ + MY + + A RV D M S+ W+ ++ A
Sbjct: 158 RAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARL 217
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
GL D+ L+L +M + G +PN T+ V S C EA SM + G+ P
Sbjct: 218 GLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQ-GLRPDATT 276
Query: 417 YLGLVGVLGKCGHL 430
L+ + G L
Sbjct: 277 VSSLLKSVANTGLL 290
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 199/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + E +++H + L++ D + N +++MY KCG++ AR +FD + ++ + SW
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 521
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+MI GY +G G E + F +MR G++P+E +F+++ AC + ++E + F M++
Sbjct: 522 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 581
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
I P +EHY +V +L + G+L +A +FI+ +P EP A W AL RI+ D+ L
Sbjct: 582 NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKM-MPIEPDATIWGALLCGCRIYHDVKLA 640
Query: 467 DHAEELMVDLDPS---------------------KADPKKIPTPPPKKRTAISILDGKSR 505
+ E + +L+P K ++I +K S ++ K +
Sbjct: 641 EKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGK 700
Query: 506 LVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P + + LK +MKE + P RY L D KE AL HSE++
Sbjct: 701 VHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKI 760
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+G++S P +R+ KNLRVCGDCH K MS++V R++I+RD+ RFHHFKDG CSC
Sbjct: 761 AMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSC 820
Query: 620 GDYW 623
+W
Sbjct: 821 RGHW 824
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 6/196 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ +G+ D T+ C EN K VH+Y ++ ++ DL ++N +++MY KCG
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DA VF M + + SW+ MI GY+ N L +E L LF +M + +PN T +
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILP 460
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC S A+E IH +++ F + + LV + KCG L A+ + +P E
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDM-IP-EK 516
Query: 446 TAEFWEALRNYARIHG 461
W + +HG
Sbjct: 517 DLVSWTVMIAGYGMHG 532
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 198 PNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVAD----- 252
P+Q + + + YP N + P + P +N+ ++ G VLP D
Sbjct: 16 PHQIHRENSLTYP---NGFIFFRPSSKTPLVSSNLYHSC--ATIGTSVLPSETIDCKITD 70
Query: 253 ----LARLCQEGKVKEAIELMDKGVKADASC--FYTLFELCGNPKWYENAKKVHDYFLQS 306
+ R C+ G ++ A+EL+++ K D + ++ +LC + K ++ +++H +
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSN 130
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D VL +K++ MY CG + + RR+FD +A+ + W+L++NGYA G E L LF
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAI 394
++MR+LG++ E +F G D I
Sbjct: 191 KRMRELGIRRVESA-RKLFDELGDRDVI 217
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ G+ D + ++ C N + +H Y ++++ +L LNN +++MY K G
Sbjct: 241 QMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSG 300
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
++ A +VF+ M +RS+ SW MI GYA GL D ++LF +M K G+ P+ T +
Sbjct: 301 NLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILH 360
Query: 387 ACGSADAIEEA-----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
AC +E +I M+S+ +S L+ + KCG + +A +
Sbjct: 361 ACACTGLLENGKDVHNYIKENKMQSDLFVSN------ALMDMYAKCGSMGDAHSVFSE 412
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 209/399 (52%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA + K V+ DA+ +L C + ++ + H + + +
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I+MY KCG + +R+VF+ M R + SW+ MI GY +GLG E LF +M LG
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ TF+ + SAC + + E F M +G++P EHY+ +V +L + G L EA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
+FI Q +P W AL R++ +IDL ++ +L P
Sbjct: 483 YEFI-QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541
Query: 480 ------KADPKKI-PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
A+ + I KK S ++ L F ++P +YR+ + + L
Sbjct: 542 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNI--L 599
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+K+ Y PDT +VL D+++E KE+AL+ HSE+LAIAYG++S + + KNLRVCG
Sbjct: 600 VGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCG 659
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH IK +S + R +IVRD RFHHFK+G+CSCGD+W
Sbjct: 660 DCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 20/243 (8%)
Query: 268 LMDKGVKADASCFYT------LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
L+ K + A CF + C + +++H +S + DL N ++ M
Sbjct: 210 LLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSM 269
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
Y K G + A +FD MA + S+ +++GY NG +E +F++M+ ++P+ T
Sbjct: 270 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 329
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+++ AC A++ S+ G++ T L+ + KCG + ++Q + +
Sbjct: 330 VSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMM 387
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILD 501
P + + Y IHG L A L ++++ PP T I +L
Sbjct: 388 PSRDIVSWNTMIAGYG-IHG---LGKEATALFLEMNN--------LGFPPDGVTFICLLS 435
Query: 502 GKS 504
S
Sbjct: 436 ACS 438
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + +H + + + ++ DL ++ +++MY KC + DA +F M R + +W
Sbjct: 20 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 79
Query: 347 HLMINGYADNGLGDEGLQ--LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFES 403
+ M+ GYA +G+ + L QM+ L+PN T +A+ A+ + +H
Sbjct: 80 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYC 139
Query: 404 MK--------SEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
++ S+ ++ G L+ + KCG L A++ +
Sbjct: 140 IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFL----------QSTIRGDLVLNNKVIEMY 322
++ +AS L L VH Y + +S + ++L +++MY
Sbjct: 109 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY 168
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
KCGS+ ARRVFD M R+ +W +I G+ + LF+ M GL T +
Sbjct: 169 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 228
Query: 383 A-VFSACGSAD 392
A AC S D
Sbjct: 229 ASALRACASLD 239
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 211/406 (51%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L+ Q GK +EA + K ++ D + +L C + ++ K H +
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR 437
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + N +I+MY KCG + +R+VFD M R + SW+ MI GY +GLG E LF
Sbjct: 438 GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLF 497
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M+ G P++ TF+ + +AC + + E F++M ++GI P EHY+ +V +L +
Sbjct: 498 LGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 557
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA QFI Q +P + W AL RIH +IDL ++ L P
Sbjct: 558 GGLLDEAYQFI-QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVL 616
Query: 479 ------------SKADPKKI-PTPPPKKRTAISILDGKSRLVEFR--------NPTLYRD 517
A+ + I KK S ++ L F + +Y +
Sbjct: 617 LSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHE 676
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ + + +K+ Y DT +VL D+++E KE+ALLYHSE+LAIA+G++S + +
Sbjct: 677 LDNI--MVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVT 734
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH AIK M+ + R +IVRD RFHHFK+G+CSCG++W
Sbjct: 735 KNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTL------FELCGNPKWYENAKKVHDYFLQSTIR 309
LC ++ EA L K + + CF + +C + ++H +S I
Sbjct: 283 LCD--RMTEAFNLF-KDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DL +N ++ MY K G + +A FD +A + S+ +++G NG +E +F++M
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ ++P+ T +++ AC A++ S+ G++ T L+ + KCG
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR-GLALETSICNSLIDMYAKCGK 458
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ ++Q + K+P + + Y IHG
Sbjct: 459 IDLSRQVFD-KMPARDVVSWNTMIAGYG-IHG 488
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 5/172 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD---LVLNNKVIEMYGKCGSM 328
G++ +AS +L L +H Y L++ + + +++ +++MY KC +
Sbjct: 197 GLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQL 256
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA-VFSA 387
A RVF M R+ +W +I G+ E LF+ M GL T +A
Sbjct: 257 VYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRV 316
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C S + ++ ++ GI L+ + K G + EA F ++
Sbjct: 317 CASLADLHMG-TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL-QLFEQM 369
DL ++ +I++Y +C AR VF M R + +W+ M+ GYA++G+ + L +
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 193
Query: 370 RKLGLQPNEQTFLAVF 385
GL+PN T +++
Sbjct: 194 DHGGLRPNASTLVSLL 209
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 223/405 (55%), Gaps = 42/405 (10%)
Query: 253 LARLCQEGKVKEAIELMDKGVKA-----DASCFYTLFELCGNPKWYENAKKVHDYFLQST 307
+A Q G+ AIEL + + A D ++ CG+ E V + ++
Sbjct: 365 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ 424
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
I+ + +N +I MY +CGSM DA+RVF MA R + S++ +I+G+A +G G E + L
Sbjct: 425 IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 484
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M++ G++P+ TF+ V +AC A +EE FES+K P +HY +V +LG+
Sbjct: 485 TMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRV 539
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------ 481
G L +A++ +E ++P EP A + +L N +RIH ++L + A + +L+P +
Sbjct: 540 GELEDAKRTME-RMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILL 598
Query: 482 -----------DPKKIPTPPP----KKRTAISILDGKSRLVEF--------RNPTLYRDD 518
D ++I KK T S ++ +L +F R+ +Y+
Sbjct: 599 SNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 658
Query: 519 EKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+L+ +M+E+ Y+ D VL D+++E KE+ + HSE+LAI Y L+ + A +R++K
Sbjct: 659 IELR--KKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVK 716
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH AIK++S++ GR +IVRDN RFH F DG CSC DYW
Sbjct: 717 NLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ ++ Y K + ARR FD M +RS+ SW+ M++GYA NGL +E L+LF++M
Sbjct: 193 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMV 252
Query: 371 KLGLQPNEQTFLAVFSACGSAD--AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
G++P+E T++ V SAC S + + + K I L+ + KCG
Sbjct: 253 NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQ---IQLNCFVRTALLDMYAKCG 309
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+ A++ ++ + + + + Y R+ G++D
Sbjct: 310 SIGAARRIFDELGAYRNSVTWNAMISAYTRV-GNLD 344
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 45/186 (24%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELC---GNPKWYEN-AKKVHDY 302
A L+ Q G +E + L D+ G++ D + + T+ C G+P + + +H
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH-- 287
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH------------------------- 337
Q I+ + + +++MY KCGS+ ARR+FD
Sbjct: 288 --QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDS 345
Query: 338 -------MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACG 389
M R++ +W+ MI GYA NG ++LF++M L P+E T ++V SACG
Sbjct: 346 ARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 405
Query: 390 SADAIE 395
A+E
Sbjct: 406 HLGALE 411
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ DA + L + GN H + L+ D + N VI+MY + G + A
Sbjct: 95 GVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHA 149
Query: 332 RRVFDHMAD--RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
R+VFD + D R + W+ M++GY + LF+ M + N T+ A+ +
Sbjct: 150 RKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP----ERNVITWTAMVTGYA 205
Query: 390 SADAIEEAFIHFESM 404
+E A +F+ M
Sbjct: 206 KVKDLEAARRYFDCM 220
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 207/403 (51%), Gaps = 54/403 (13%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K D + + E C + + ++VH+ + + +L L ++ MY KCGS+ +AR
Sbjct: 338 KMDPVAYLCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEARE 397
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VFD M R+M +W+ M+ GY +G LQLFE G+ P+E TF+ + +AC A
Sbjct: 398 VFDGMKARNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGM 457
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE-PTAEF--W 450
++ HF S++++FG+ P +HY+ +V +LG+ G L A++ +E+ F P EF W
Sbjct: 458 VKPGVWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPW 517
Query: 451 EALRNYARIHGDID----------------------------LEDHAEELMVDLDPSKAD 482
AL ++H D+ L++ A L V L A
Sbjct: 518 MALLASCKVHTDVKRAARISSVLSAKKKKLLSSSSSGSGSWHLKNSAAPL-VMLSNIYAQ 576
Query: 483 PKK----------IPTPPPK-----KRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQM 527
KK I K ++ S ++ + + EF L+ E ++M
Sbjct: 577 AKKWEEMTGVRNEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEM 636
Query: 528 K-------ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
K + YVPDT V+HD+++ KE L HSER+AIA+GL+ + T +R++ NL
Sbjct: 637 KRLEELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNL 696
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
R+C DCH A+K++S+ VGRE++VRD +RFHHF G+CSC DYW
Sbjct: 697 RICSDCHAAVKLISKTVGREILVRDTRRFHHFASGECSCQDYW 739
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 253 LARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ Q G +EA+ L +GVKA+ + +C + K + +H + +
Sbjct: 107 ISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA-- 164
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ D+V+ N ++ MY KCGS+ +AR F M R + SW MI +++G +E +++F +
Sbjct: 165 KKDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWE 224
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
M + PNE + LAV AC
Sbjct: 225 MVSENVAPNEISCLAVLGAC 244
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
N + +++H + + D L N ++ +YGK G + A FD +A +++ SW +
Sbjct: 46 NARCLAAVEELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTI 105
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA-DAIEEAFIHFESMKSE 407
+I+ +A NG E L LF QM + G++ NE T AV C S D IH + ++
Sbjct: 106 VISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAK 165
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLED 467
+ G LV + KCG L EA+ ++ + + + W + HG+ +
Sbjct: 166 KDVVIGN----ALVNMYSKCGSLREARASFQEMVVRDVVS--WTTMITALSEHGEW---N 216
Query: 468 HAEELMVDLDPSKADPKKIP 487
A E+ ++ P +I
Sbjct: 217 EAVEIFWEMVSENVAPNEIS 236
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELM------DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
Q G+ EA+EL D V +A C +++H Y L++
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532
Query: 312 -LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L + N +I+MY K G + AR VFD+M R+ SW ++ GY +G G+E LQ+F +M+
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
K+ L P+ TF+ V AC + +++ +F M +FG+ PG EHY +V +L + G L
Sbjct: 593 KVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK---------- 480
EA + I + +P +PT W AL + R++ +++L ++A +++L+
Sbjct: 653 DEAMELI-RGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNI 711
Query: 481 -------ADPKKI----PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL 524
D +I KKR S + G+ F +P + + L+ L
Sbjct: 712 YANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDL 771
Query: 525 NQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
Q +K YVPD R+ LHD+D E K L HSE+LA+AYG+++T P+RI KNLR C
Sbjct: 772 MQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRAC 831
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
GDCH+A +S I+ E+IVRD+ RFHHFK+G CSC YW
Sbjct: 832 GDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 232 VPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM-----DKGVKADASCFYTLFEL 286
V + M + GD V S+ +A Q G A+++ D G++ DA +
Sbjct: 202 VFDEMRERGVGDLVSWNSI--VAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 259
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + K+VH Y L+S + D+ + N V++MY KCG M +A +VF+ M + + SW
Sbjct: 260 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 319
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ M+ GY+ G D+ L LFE++R+ ++ N T+ AV + EA F M
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM-- 377
Query: 407 EFGISPGTE-HYLGLVGVLGKCG 428
+ G+E + + LV +L C
Sbjct: 378 ---LLCGSEPNVVTLVSLLSGCA 397
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G + D F + + CG + VH S ++ + N ++ MYG+CG+ +A
Sbjct: 140 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENA 199
Query: 332 RRVFDHMADRSMD---SWHLMINGYADNGLGDEGLQLFEQMRK-LGLQPNEQTFLAVFSA 387
R+VFD M +R + SW+ ++ Y G +++FE+M + LG++P+ + + V A
Sbjct: 200 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 259
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C S A +H +++S G+ +V + KCG + EA + E+
Sbjct: 260 CASVGAWSRGKQVHGYALRS--GLFEDVFVGNAVVDMYAKCGMMEEANKVFER 310
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A Q G EA+++ + G + + +L C + + K+ H + ++
Sbjct: 356 AVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKW 415
Query: 307 TIR-------GDLVLNNKVIEMYGKCGSMTDARRVFDHM--ADRSMDSWHLMINGYADNG 357
+ DL++ N +I+MY KC S AR +FD + DRS+ +W ++I G A +G
Sbjct: 416 ILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHG 475
Query: 358 LGDEGLQLFEQMRKLG--LQPNEQTFLAVFSACGSADAI 394
+E L+LF QM + + PN T AC A+
Sbjct: 476 EANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL 514
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 318 VIEMYGKCGSMTDARRVFD--HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I MY S A V H + ++ W+ +I G ++ LQL+ +M++LG +
Sbjct: 83 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142
Query: 376 PNEQTFLAVFSACGSADAIE-EAFIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFE 432
P+ TF V ACG + A +H S E+ + G GLV + G+CG
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN----GLVSMYGRCGAWEN 198
Query: 433 AQQFIEQ 439
A+Q ++
Sbjct: 199 ARQVFDE 205
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 200/384 (52%), Gaps = 28/384 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ +GVK + C + E +++H +S D+ + + +++MY KCG
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M +A +F+ + R +W+ +I GYA NG G++ L F M G+ P+ TF + S
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC +EE HF SM +FGISP +H +V +LG+ G E + FI QK+
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFI-QKMQLSQN 785
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI--- 486
A WE + +++H ++ L + A + +L P + D K++
Sbjct: 786 ALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSL 845
Query: 487 -PTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYV 539
+ KK S ++ ++ F +P + KL L+ ++ YVP T YV
Sbjct: 846 MSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYV 905
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGR 599
LH++ + K++ L +HSERLA+ + LIST + +RI KNLR+C DCH+ +K +S I +
Sbjct: 906 LHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQ 965
Query: 600 ELIVRDNKRFHHFKDGKCSCGDYW 623
E++VRD +RFHHFK+G CSC D+W
Sbjct: 966 EIVVRDVRRFHHFKNGACSCNDFW 989
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++++G + F ++ C ++VH + +++ + + + +I+MY KC
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ DA F+ ++ R + +W ++I YA G++ L F QM++ G++PNE T S
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSG 626
Query: 388 CGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFE 444
C S ++E +H KS ++ ++G LV + KCG + EA+ E + +
Sbjct: 627 CSSLASLEGGQQLHSMVFKS----GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRD 682
Query: 445 PTA 447
A
Sbjct: 683 TIA 685
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKK 298
D+ + A + L EG ++I E+ ++G+ + T + C + K+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H + + DL + + ++++Y KCG + A ++F M +++ +W++++NGYA G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHY 417
L+LF M +L ++ NE T V C ++ +++ IH +K + G E
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY---EGNEFI 351
Query: 418 -LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GLV + KCG +A K +P W AL
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVF--KTIKKPDIVVWSAL 386
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + AK +H ++ I D L ++ +Y KC AR V M DR + SW
Sbjct: 122 CASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSW 181
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+I G G ++ + LF++M+ G+ PNE T AC A++ + M +
Sbjct: 182 TALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG----KQMHA 237
Query: 407 E-FGISPGTEHYLG--LVGVLGKCGHL-FEAQQFIEQKLPFEPTAEFWEALRNYARIHGD 462
+ F + + ++G LV + KCG + ++ FI +P E W L N GD
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFI--GMP-EQNDVTWNVLLNGYAQRGD 294
Query: 463 I 463
+
Sbjct: 295 V 295
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L Q+G+ +E+I+L D +L N + + +H +
Sbjct: 385 ALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKY 444
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D+ ++N ++ MY K G + D ++++ M DR + SW+ ++G D G+ D L +F
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 367 EQMRKLGLQPNEQTFLAVFSAC 388
M + G PN TF+++ +C
Sbjct: 505 YHMLEEGFIPNMYTFISILGSC 526
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G +K +M+ VK + T+ + C N K + + +H ++ G+ + ++
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLV 356
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG DA VF + + W +I G +E ++LF MR PN+
Sbjct: 357 DMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQY 416
Query: 380 TFLAVFSA 387
T ++ SA
Sbjct: 417 TICSLLSA 424
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 213/400 (53%), Gaps = 35/400 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG--D 311
Q K +EAI +K GV+ D + C + A + D +S G
Sbjct: 256 QNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHS 315
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V+ + +I+MY KCGS+ DA RVF M +R++ S+ MI G+A +G + ++LF++M K
Sbjct: 316 VVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVK 375
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
++PN TF+ V +AC A +E+ + FE M+ +GI P +HY +V +LG+ G L
Sbjct: 376 TEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQ 435
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------- 478
EA + + + +P EP W AL RIH D+ A + +L+P
Sbjct: 436 EAHELV-KTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIY 494
Query: 479 --------SKADPKKIPTPPPKKRTAISILDGKSRLV-EFRNPTLY--RDDEKLKA---- 523
K + T +K A S ++ + +V EF + + R E +A
Sbjct: 495 ASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDL 554
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
L++++ Y P V +D++ E K + L+ HSE+LA+A+GLIST + +RI+KNLR+C
Sbjct: 555 LDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRIC 614
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+ I S+I GRE+IVRD RFHHF DG CSCG++W
Sbjct: 615 EDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 259 EGKVKEAIE---LMDK-GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG---- 310
E ++KE+ E LM K GV + F LF+ CG +++H Q+ + G
Sbjct: 124 EERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHG---QTILVGGFGE 180
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRS---------------------------- 342
DL + N +I+MY KCG + R+VFD M +R
Sbjct: 181 DLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLP 240
Query: 343 ---MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-F 398
M +W +M++G+A N E + FE+M++ G++ +E T + V SAC A + A +
Sbjct: 241 VKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADW 300
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYA- 457
I + KSEFG L+ + KCG + +A + + Q + + + +A
Sbjct: 301 IRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYR-VFQGMKERNVYSYSSMILGFAM 359
Query: 458 --RIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
R+H + L D E + ++ P++ + T
Sbjct: 360 HGRVHDAMKLFD--EMVKTEIKPNRVTFIGVLT 390
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 211/406 (51%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L+ Q GK +EA + K ++ D + +L C + ++ K H +
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR 437
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + N +I+MY KCG + +R+VFD M R + SW+ MI GY +GLG E LF
Sbjct: 438 GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLF 497
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M+ G P++ TF+ + +AC + + E F++M ++GI P EHY+ +V +L +
Sbjct: 498 LGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 557
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------- 478
G L EA QFI Q +P + W AL RIH +IDL ++ L P
Sbjct: 558 GGLLDEAYQFI-QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVL 616
Query: 479 ------------SKADPKKI-PTPPPKKRTAISILDGKSRLVEFR--------NPTLYRD 517
A+ + I KK S ++ L F + +Y +
Sbjct: 617 LSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHE 676
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ + + +K+ Y DT +VL D+++E KE+ALLYHSE+LAIA+G++S + +
Sbjct: 677 LDNI--MVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVT 734
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCH AIK M+ + R +IVRD RFHHFK+G+CSCG++W
Sbjct: 735 KNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 256 LCQEGKVKEAIELMDKGVKADASCFYTL------FELCGNPKWYENAKKVHDYFLQSTIR 309
LC ++ EA L K + + CF + +C + ++H +S I
Sbjct: 283 LCD--RMTEAFNLF-KDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
DL +N ++ MY K G + +A FD +A + S+ +++G NG +E +F++M
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ ++P+ T +++ AC A++ S+ G++ T L+ + KCG
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR-GLALETSICNSLIDMYAKCGK 458
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+ ++Q + K+P + + Y IHG
Sbjct: 459 IDLSRQVFD-KMPARDVVSWNTMIAGYG-IHG 488
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 5/172 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD---LVLNNKVIEMYGKCGSM 328
G++ +AS +L L +H Y L++ + + +++ +++MY KC +
Sbjct: 197 GLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQL 256
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA-VFSA 387
A RVF M R+ +W +I G+ E LF+ M GL T +A
Sbjct: 257 VYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRV 316
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
C S + ++ ++ GI L+ + K G + EA F ++
Sbjct: 317 CASLADLHMG-TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL-QLFEQM 369
DL ++ +I++Y +C AR VF M R + +W+ M+ GYA++G+ + L +
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 193
Query: 370 RKLGLQPNEQTFLAVF 385
GL+PN T +++
Sbjct: 194 DHGGLRPNASTLVSLL 209
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 201/389 (51%), Gaps = 40/389 (10%)
Query: 269 MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSM 328
+D VK D + C N + K+VHD+ ++ + G L L+N ++ MY +CGSM
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 329 TDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A +VF M +R++ SW +I+G A NG G E ++ F +M K G+ P EQT + SAC
Sbjct: 269 DKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
Query: 389 GSADAIEEAFIHFESMKS-EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+ + E + F+ M+S EF I P HY +V +LG+ L +A I + + +P +
Sbjct: 329 SHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI-KSMEMKPDS 387
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------------------- 481
W L R+HGD++L + +++L +A
Sbjct: 388 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 447
Query: 482 DPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLY--RDDEKLKAL----NQMKESTYVPD 535
K+I T P S ++ + + EF + R +E K L Q+K + YV +
Sbjct: 448 KEKRIHTKP-----GCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502
Query: 536 TRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
LH+++ +E K AL YHSE+LAIA+G++ TP T +R+ KNLR C DCHN K +S
Sbjct: 503 ITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVS 562
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ R +IVRD RFHHFK G CSC D+W
Sbjct: 563 DVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H D +L ++++Y C + TDA +VFD + R SW+++ + Y N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 358 LGDEGLQLFEQMR---KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
+ L LF++M+ ++P+ T L AC + A++ E G+S
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG-KQVHDFIDENGLSGAL 252
Query: 415 EHYLGLVGVLGKCGHLFEAQQ 435
LV + +CG + +A Q
Sbjct: 253 NLSNTLVSMYSRCGSMDKAYQ 273
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 232/429 (54%), Gaps = 44/429 (10%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKA-----DASCFYTL 283
L++ N P + V S+ +A Q G+ AIEL + + A D ++
Sbjct: 311 LDSARKLFNTMPGRNVVTWNSM--IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
CG+ E V + ++ I+ + +N +I MY +CGSM DA+RVF MA R +
Sbjct: 369 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 428
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFES 403
S++ +I+G+A +G G E + L M++ G++P+ TF+ V +AC A +EE FES
Sbjct: 429 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES 488
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+K P +HY +V +LG+ G L +A++ +E ++P EP A + +L N +RIH +
Sbjct: 489 IK-----DPAIDHYACMVDLLGRVGELEDAKRTME-RMPMEPHAGVYGSLLNASRIHKQV 542
Query: 464 DLEDHAEELMVDLDPSKA-----------------DPKKIPTPPP----KKRTAISILDG 502
+L + A + +L+P + D ++I KK T S ++
Sbjct: 543 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 602
Query: 503 KSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLY 554
+L +F R+ +Y+ +L+ +M+E+ Y+ D VL D+++E KE+ +
Sbjct: 603 GGKLHKFIVADRSHERSDDIYQLLIELR--KKMREAGYIADKSCVLRDVEEEEKEEIVGT 660
Query: 555 HSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKD 614
HSE+LAI Y L+ + A +R++KNLRVC DCH AIK++S++ GR +IVRDN RFH F D
Sbjct: 661 HSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFND 720
Query: 615 GKCSCGDYW 623
G CSC DYW
Sbjct: 721 GLCSCKDYW 729
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ ++ Y K + ARR FD M +RS+ SW+ M++GYA NGL +E L+LF++M
Sbjct: 193 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMV 252
Query: 371 KLGLQPNEQTFLAVFSACGS 390
G++P+E T++ V SAC S
Sbjct: 253 NAGIEPDETTWVTVISACSS 272
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELC---GNPKWYEN-AKKVHDY 302
A L+ Q G +EA+ L D+ G++ D + + T+ C G+P + + +H
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH-- 287
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEG 362
Q I+ + + +++MY K G + AR++F+ M R++ +W+ MI GYA NG
Sbjct: 288 --QKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMA 345
Query: 363 LQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEA--FIHFESMKSEFGISPGTEHYLG 419
++LF++M L P+E T ++V SACG A+E + F +E I +
Sbjct: 346 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRF---LTENQIKLSISGHNA 402
Query: 420 LVGVLGKCGHLFEAQQFIEQ 439
++ + +CG + +A++ ++
Sbjct: 403 MIFMYSRCGSMEDAKRVFQE 422
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GV+ DA + L + G H + L+ D + N VI+MY + G + A
Sbjct: 95 GVRPDAFVYPILIKSAGT-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHA 149
Query: 332 RRVFDHMAD--RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
R+VFD + D R + W+ M++GY + LF+ M + N T+ A+ +
Sbjct: 150 RKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP----ERNVITWTAMVTGYA 205
Query: 390 SADAIEEAFIHFESM 404
+E A +F+ M
Sbjct: 206 KVKDLEAARRYFDCM 220
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 197/381 (51%), Gaps = 32/381 (8%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+ D + L C + A+ +H Y + D+++ ++ +Y K G + +
Sbjct: 337 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 396
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
+F+ + DR +W M+ GYA + G E ++LF+ M K G++ + TF + SAC +
Sbjct: 397 EDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 456
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+EE +FE M + + P +HY +V +LG+ G L +A + I + +P EP++ W
Sbjct: 457 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELI-KSMPMEPSSGVWG 515
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSK----ADPKKIPTPPPKKRTA--ISILDGKSR 505
AL R++G+++L E ++ LDPS I + R A + L + R
Sbjct: 516 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERR 575
Query: 506 LVEFRNPTLY-------------------RDDE---KLKAL-NQMKESTYVPDTRYVLHD 542
L RNP R DE KL+ L ++ E+ P T +VLHD
Sbjct: 576 LT--RNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHD 633
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
ID+E K + HSE+LAIA+GL+ T + PL I KNLR+CGDCH+ K S + R +I
Sbjct: 634 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 693
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
+RD+KRFHHF DG CSC DYW
Sbjct: 694 IRDSKRFHHFADGLCSCRDYW 714
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++S D + ++++ MY K G DA+R+FD M +R + SW+ +++G + G
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220
Query: 359 GDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
L F +MR + G QPNE T L+V SAC A++E + + G+S +
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG-KSLHGVVVKLGMSGKAKVV 279
Query: 418 LGLVGVLGKCGHLFEAQQFIEQ 439
L+ + GK G L A Q E+
Sbjct: 280 NSLINMYGKLGFLDAASQLFEE 301
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
++ C + K +H ++ + G + N +I MYGK G + A ++F+ M
Sbjct: 244 LLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 303
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS------ADA 393
RS+ SW+ M+ + NG ++G+ LF M++ G+ P++ T +A+ AC A++
Sbjct: 304 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 363
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
I A+IH ++ I+ L+ + K G L ++ E+ + A W A+
Sbjct: 364 I-HAYIHRCGFNADIIIAT------ALLNLYAKLGRLNASEDIFEEIKDRDTIA--WTAM 414
Query: 454 RNYARIHG 461
+H
Sbjct: 415 LAGYAVHA 422
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 198/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + + ++VH + + D+ ++N ++ MY KCG + D VF M+ +++ SW
Sbjct: 350 CCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSW 409
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ +I G A +G G L LF QM + + P+E T + SACG + + + F+
Sbjct: 410 NSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGK 469
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
FGI EHY +V +LG+ G L EA+ I +P + W AL + + H ++ +
Sbjct: 470 NFGIEMTNEHYSSMVDLLGRYGQLEEAEALI-HIMPGKANYMVWLALLSSSINHSNVHVA 528
Query: 467 DHAEELMVDLDPSKADPKKIPT---PPPKKRTAISILDGK-----------SRLVEFR-- 510
+ A + ++DL P+ + + + K T +S + K S + +
Sbjct: 529 ERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGI 588
Query: 511 ----------NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+P + +KL+ L ++KE YVPD ++ HD++ E KE+ L YHSERL
Sbjct: 589 KHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERL 648
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
AI +GLIST + + ++KNLR+CGDCHNA+K+ S++VGRE++VRD RFHHF +G CSC
Sbjct: 649 AIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSC 708
Query: 620 GDYW 623
GDYW
Sbjct: 709 GDYW 712
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 260 GKVKEAIELMDK---GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
G+ EA+ + K KA +S C N ++H +++ + ++
Sbjct: 219 GRSFEALVVFHKMLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISA 278
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I Y C + +A +F+ R++ W ++ GY N + LQ+F+ M ++ + P
Sbjct: 279 SLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLP 338
Query: 377 NEQTFLAVFSACGSADAIEE-----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
N+ + + ++C +A++ A H ++S+ +S LV + KCGH+
Sbjct: 339 NQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSN------SLVVMYTKCGHI 391
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 247 PPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
PPS L+ + G++ EA L +K + + + + E+A K+ F +
Sbjct: 51 PPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKL---FYEM 107
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
++ DL+ N +++ KCG +T A +FD M++R++ SW +ING + G + LF
Sbjct: 108 PVK-DLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLF 166
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
M + FS DAIE FE M + IS + ++G L
Sbjct: 167 RVMPTKDVTAWNSMVHGFFSNGRVEDAIEL----FEKMPNRNVIS-----WTSVIGGLDH 217
Query: 427 CGHLFEAQQFIEQKLP-FEPTAE 448
G FEA + L F+ T+
Sbjct: 218 NGRSFEALVVFHKMLASFKATSS 240
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 238/447 (53%), Gaps = 46/447 (10%)
Query: 213 RNS--YQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMD 270
RNS + + + L++ N P + V S+ +A Q G+ AIEL
Sbjct: 167 RNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSM--IAGYAQNGQSAMAIELFK 224
Query: 271 KGVKA-----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ + A D ++ CG+ E V + ++ I+ + +N +I MY +C
Sbjct: 225 EMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRC 284
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GSM DA+RVF MA R + S++ +I+G+A +G G E + L M++ G++P+ TF+ V
Sbjct: 285 GSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVL 344
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
+AC A +EE FES+K P +HY +V +LG+ G L +A++ +E ++P EP
Sbjct: 345 TACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTME-RMPMEP 398
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI-- 486
A + +L N +RIH ++L + A + +L+P + D ++I
Sbjct: 399 HAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIRE 458
Query: 487 --PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDT 536
KK T S ++ +L +F R+ +Y+ +L+ +M+E+ Y+ D
Sbjct: 459 AMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELR--KKMREAGYIADK 516
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VL D+++E KE+ + HSE+LAI Y L+ + A +R++KNLRVC DCH AIK++S++
Sbjct: 517 SCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKL 576
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
GR +IVRDN RFH F DG CSC DYW
Sbjct: 577 EGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++ ++ Y K + ARR FD M +RS+ SW+ M++GYA NGL +E L+LF++M
Sbjct: 104 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM- 162
Query: 371 KLGLQPNEQTFLAVFSA---CGSADAIEEAF 398
LG N T+ A+ SA G D+ + F
Sbjct: 163 -LGAYRNSVTWNAMISAYMRVGDLDSARKLF 192
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 212/403 (52%), Gaps = 31/403 (7%)
Query: 250 VADLARL-CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A RL C V E+ GV D ++ C + E K V Y + I
Sbjct: 200 IAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNI 259
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ L N +I+M+ KCG++ A ++F M R++ SW +I G A +G G + + LF++
Sbjct: 260 PKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDE 319
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M + G+ P++ F+ V SAC + +++ +F SM+ F I P EHY +V +L + G
Sbjct: 320 MVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGG 379
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT 488
+ EA +F+ QK+PFEP W + G++ L + + ++ +P + +
Sbjct: 380 FVKEAFEFV-QKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLS 438
Query: 489 PP-------PKKRTAISILDGK-------SRLVEFRNPTLY------RDDEKLKALNQM- 527
KK ++D + S ++E N +Y + ++ K + +M
Sbjct: 439 NIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNE-MYEFVAGDKSHDQYKEIYEMV 497
Query: 528 -------KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
K++ YVP T VL DID+E KE AL HSE+LAIA+ L++TP T +RI+KNL
Sbjct: 498 DEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNL 557
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVC DCH+A K +S++ RE++VRD RFHHFK+G CSC D+W
Sbjct: 558 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG- 326
++ GV + F + + C K VH ++ D+ + N +I MY G
Sbjct: 116 MLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGE 175
Query: 327 -SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
A +VFD +W MI G+ G + LF +M+ +G+ P+E T ++V
Sbjct: 176 DGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVL 235
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
SAC A+E ES + I E L+ + KCG++ +A + Q
Sbjct: 236 SACADLGALELG-KWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQ 288
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 226/447 (50%), Gaps = 36/447 (8%)
Query: 210 PQARN--SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI- 266
P+ R+ ++ V G+ + + P D+V ++ + +EG++ A+
Sbjct: 192 PRVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTL--VGGYVKEGELDVALG 249
Query: 267 ---ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG 323
++++KGV+ + + T E+ + VH+ ++ + + + +++M+
Sbjct: 250 VFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFS 309
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
KCG + AR VFD M R + +W+ MI G A +GLG + ++LF + GL P + TF+
Sbjct: 310 KCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVG 369
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPF 443
V +AC + E +F+ M ++ I P EHY +V +LG+ G + EA + IE +
Sbjct: 370 VLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIE-GMHI 428
Query: 444 EPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------ADPKK------- 485
P W + + + H +DL +++L+P+ A KK
Sbjct: 429 APDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREV 488
Query: 486 ---IPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDE-----KLKALNQ-MKESTYVPDT 536
+ + K S+++ + L +F + D L +N+ + ++ YVPD
Sbjct: 489 RKLMSSRGTGKSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDV 548
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VLHDI E K A+ HSERLAIAYG I T +P+RI+KNL+VCGDCH K+++++
Sbjct: 549 SSVLHDIGDEEKVHAIKVHSERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKV 608
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+IVRD RFHH K+GKCSC DYW
Sbjct: 609 FNREIIVRDGSRFHHMKEGKCSCLDYW 635
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 64/173 (36%), Gaps = 35/173 (20%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT----------------------------- 329
VH +++ GDL + N + YG CG +
Sbjct: 152 VHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYVRAG 211
Query: 330 ---DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
AR VF+ M R SW ++ GY G D L +F M + G++ NE + S
Sbjct: 212 MVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTALS 271
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
A +E F+H ++ +S LV + KCG + A++ +
Sbjct: 272 AAAQMGLLEHGRFVHEVVQRTGMPVSVNVGA--ALVDMFSKCGCVAVAREVFD 322
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 213/392 (54%), Gaps = 32/392 (8%)
Query: 263 KEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+EA++L D+ ++ D ++ C + A +H Y +S L +NN +
Sbjct: 336 QEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNAL 395
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCG++ AR VF++M +++ SW MIN +A +G D ++LF +M+++ ++PN
Sbjct: 396 IDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ V ACG A +EE F SM +E GISP EHY +V + + L +A + IE
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+PF P W +L + ++HG+ +L + A + +++L+P
Sbjct: 516 T-MPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWN 574
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDD-----EKL-KALNQMKEST 531
K + K A S ++ +++ F Y EKL + ++++K
Sbjct: 575 DVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVG 634
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y P T +L D+++E K++ +L+HSE+LA+ YGLIS + +RI+KNLR+C DCH+ +K
Sbjct: 635 YKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMK 694
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S++ E++VRD RFHH G CSC DYW
Sbjct: 695 LVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 40/244 (16%)
Query: 257 CQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
CQ G +A+ L + +K D+ T+ CG+ + +H++ + D
Sbjct: 198 CQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDS 257
Query: 313 VLNNKVIEMYGKCGSM-------------------------------TDARRVFDHMADR 341
L +I MY CG+M DAR +FD M +R
Sbjct: 258 HLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIER 317
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ W MI+GYA++ E L+LF++M + P++ T L+V SAC A+ +A +IH
Sbjct: 318 DLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIH 377
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIH 460
+S FG + + L+ + KCG+L +A++ E +P + W ++ N +H
Sbjct: 378 TYVDRSGFGRALSVNN--ALIDMYAKCGNLVKAREVFEN-MPRKNVIS-WSSMINAFAMH 433
Query: 461 GDID 464
G+ D
Sbjct: 434 GNAD 437
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F +L + + + ++H + D + +I MY C + DAR +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
D M +W+++I+GY NG D+ L+LFE MR ++P+ V SACG A +
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
E +K G + + L+ + CG + A++
Sbjct: 240 YGRTIHEFVKDN-GYAIDSHLQTALINMYANCGAMDLARKI 279
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 195/355 (54%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H ++ D+ ++N +I Y KCGS+ DARR F M +++ SW+ MI GY+
Sbjct: 636 GKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQ 695
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G+E + LFE+M+++G PN TF+ V SAC + + +FESM E G+ P
Sbjct: 696 HGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPA 755
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V ++ + G L A++FIE+ +P EP A W L + +H ++++ + A + +++
Sbjct: 756 HYACVVDLISRAGFLSRARKFIEE-MPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLE 814
Query: 476 LDPSKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF----- 509
L+P + + + KK S ++ K+ + F
Sbjct: 815 LEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDR 874
Query: 510 RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P + E L LN + E Y D +L+D++QE K+ + HSE+LAI +GL+S
Sbjct: 875 LHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSL 934
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+ ++KNLRVC DCH+ IK +S+I R +IVRD RFHHF+ G CSC DYW
Sbjct: 935 SDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ A+ + L +LC N KK+H L+ + VL NK++++Y G +
Sbjct: 4 RGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDG 63
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+VF+ M +RS+ SW +I+G+ + + + L LF M + + P E +F +V AC
Sbjct: 64 VVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRAC 121
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG---DLVLNNKVIEMYG 323
E++++G+++D F + C + +++H QS + G DL + N ++ +Y
Sbjct: 506 EMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHA---QSYVSGYSEDLSIGNALVSLYA 562
Query: 324 KCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLA 383
+CG + +A F+ + + SW+ +I+G+A +G ++ L++F QM + L+ + TF +
Sbjct: 563 RCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGS 622
Query: 384 VFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
SA + I++ +M + G E L+ KCG + +A++
Sbjct: 623 AVSAAANIANIKQG-KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARR 673
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+++H + + +++N +I +Y K G + AR+VFD++ + SW MI+G++
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG +E + LF +M G+ P F +V S C
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 253 LARLCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q+G A+EL K +K D +L C + +++H Y +++ I
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI 345
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+++ ++++Y C + A +F ++ W++M+ + E ++F Q
Sbjct: 346 SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQ 405
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEF 408
M+ GL PN+ T+ ++ C S A++ IH + +K+ F
Sbjct: 406 MQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF 446
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C + + +++H +++ + ++ + + +I+MY K G + A + + +
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTED 479
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IH 400
+ SW +I+GYA + L E L+ F++M G+Q + F + SAC A+ + IH
Sbjct: 480 DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIH 539
Query: 401 FESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEA 433
+S S + +S G LV + +CG + EA
Sbjct: 540 AQSYVSGYSEDLSIGN----ALVSLYARCGRIKEA 570
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 250 VADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA ++ Q G +EAI E+ G+ F ++ C K ++ +++H +
Sbjct: 182 VAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFK 241
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + N ++ +Y + + A +VF M + S++ +I+G A G D L+L
Sbjct: 242 YGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALEL 301
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAI 394
F +M++ L+P+ T ++ SAC S A+
Sbjct: 302 FTKMKRDYLKPDCVTVASLLSACASNGAL 330
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 197/380 (51%), Gaps = 67/380 (17%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V D +F C E ++VH F++S+ L N +I MY KCG + DA
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAI 493
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
RVFD M R++ SW +I GYA NGL + G
Sbjct: 494 RVFDSMETRNVISWTAIIVGYAQNGLVETGQS---------------------------- 525
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+FESM+ +GI P ++HY ++ +LG+ G + EA+ + ++ EP A W++
Sbjct: 526 -------YFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLL-NRMDVEPDATIWKS 577
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPP 491
L + R+HG+++L + A + ++ L+PS + P + + T
Sbjct: 578 LLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGI 637
Query: 492 KKRTAISILDGKSRLVEFRN--------PTLYRDDEKLKALNQMKESTYVPDTRYVLHDI 543
K S ++ KS++ F + +Y +++ L +KE+ +VPD + L D+
Sbjct: 638 NKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMIL--IKEAGHVPDMNFALRDM 695
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D+EAKE++L YHSE+LA+A+GL++ P+RI KNLRVCGDCH+A+K +S I R +I+
Sbjct: 696 DEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIIL 755
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD FHHF +GKCSCGD+W
Sbjct: 756 RDLNCFHHFIEGKCSCGDFW 775
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C+ +++ ++ G K ++ C K +H Y ++ + ++ +
Sbjct: 114 CEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVAT 173
Query: 317 KVIEMYGKCGSMTDARRVFDHMADR-SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY KC + +A +F + DR + W M+ GYA NG + +Q F++MR G++
Sbjct: 174 GLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGME 233
Query: 376 PNEQTFLAVFSACGSADAIEEAF---IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
N TF ++ +AC S A AF +H + S FG P LV + KCG L
Sbjct: 234 SNHFTFPSILTACTSISAY--AFGRQVHGCIIWSGFG--PNVYVQSALVDMYAKCGDLAS 289
Query: 433 AQQFIE 438
A+ ++
Sbjct: 290 ARMILD 295
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G ++EA+ L K ++ D + ++ + + K + + VH +++ ++
Sbjct: 316 GYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVS 375
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +++MY K G+++ A VF+ + D+ + SW ++ GY NG ++ LQLF MR +
Sbjct: 376 NALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVD 435
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
++ VFSAC IE +H +KS G E+ L+ + KCG L +A
Sbjct: 436 LDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAEN--SLITMYAKCGCLEDAI 493
Query: 435 QFIE 438
+ +
Sbjct: 494 RVFD 497
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A L Q G+ +AI E+ ++G++++ F ++ C + Y ++VH + S
Sbjct: 206 AMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWS 265
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
++ + + +++MY KCG + AR + D M + W+ MI G +G +E L LF
Sbjct: 266 GFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLF 325
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSAD--AIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+M ++ ++ T+ +V + S I E+ +H ++K+ F + LV +
Sbjct: 326 HKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES-VHSLTIKTGFDACKTVSN--ALVDMY 382
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD 482
K G+L A + L + + W +L +H + A +L D+ ++ D
Sbjct: 383 AKQGNLSCALDVFNKILDKDVIS--WTSLVT-GYVHN--GFHEKALQLFCDMRTARVD 435
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y G++ +AR++F+ ++ +W +++GY NG EGL+ F QM G +
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQK 131
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKS--EFGISPGTEHYLGLVGVLGKCGHLFE 432
P++ T +V AC + + IH ++K E I T GLV + KC L E
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVAT----GLVDMYSKCKCLLE 187
Query: 433 AQQFIEQKLPFEPTAEFWEA-LRNYAR 458
A +++ LP W A L YA+
Sbjct: 188 A-EYLFFSLPDRKNYVQWTAMLTGYAQ 213
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 215/397 (54%), Gaps = 36/397 (9%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +AI E+ KGV D ++ C E K V Y + ++ ++ L+
Sbjct: 94 GRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELS 153
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+M+ KCG + A +F M +R++ SW +I G A +G G E + +FE+M + G+
Sbjct: 154 NALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVT 213
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ F+ + SAC + +++ +F+SM+ +F I P EHY +V +L + G + EA +
Sbjct: 214 PDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALK 273
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------SKA 481
F+ Q++P +P W L N R HG++ L + ++ +P +
Sbjct: 274 FV-QEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMS 332
Query: 482 DPKK-------IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ 526
D +K + KK ++++ + + EF ++ +Y +++ +
Sbjct: 333 DWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMG--KE 390
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
MK + Y+P T VL DID E KE L HSE+LAIA+ L++TP T +RI+KNLRVC DC
Sbjct: 391 MKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDDC 450
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H+A K +S+I RE++VRD RFHHFK+G CSC D+W
Sbjct: 451 HSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKC----GSMTDARRVFDHMADRSMDSWHLMIN 351
K VH ++ ++ + N ++ MY C G + AR+VFD M SW MI
Sbjct: 29 GKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIG 88
Query: 352 GYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE-----EAFIHFESMKS 406
GY G + + LF +M+ G+ P+E T ++V SAC A+E E+++ E ++
Sbjct: 89 GYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQK 148
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+S L+ + KCG + +A
Sbjct: 149 NVELSN------ALIDMFAKCGDVDKATNL 172
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 215/407 (52%), Gaps = 38/407 (9%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ Q K EA+ L + G K + C ++ +K+H Y
Sbjct: 176 ALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVE 235
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQL 365
+ + N VI+MY KCG + A VF+ M+ R + +W+ MI +A +G G + L+L
Sbjct: 236 RFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALEL 295
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
FE+M + G+ P++ ++LAV AC +EE F F SM++ G+ P +HY +V +LG
Sbjct: 296 FEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMEN-CGVKPNVKHYGSVVDLLG 354
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----- 480
+ G L EA + +P P W+ L +R H ++++ + +V++ +
Sbjct: 355 RAGRLHEAYDIV-NSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFV 413
Query: 481 ------------ADPKKIPTP----PPKKRTAISILDGKSRLVEFRNP--------TLYR 516
AD ++ KK +S ++G + +F N +Y
Sbjct: 414 LLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYA 473
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
++++ ++KE YV +T +VLHDI +E KE L +HSE+LA+A+GLIST TP+++
Sbjct: 474 KLDEIRF--RVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQV 531
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLR+CGDCH IK++S+I RE+IVRD RFH FK+G CSC DYW
Sbjct: 532 IKNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 144/358 (40%), Gaps = 44/358 (12%)
Query: 268 LMDKGVKADA-SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ K K DA +C + L + C + ++H + ++ D +L ++++Y K G
Sbjct: 96 MISKSRKVDALTCSFVL-KACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVG 154
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +VFD M R + SW+ +I+G+A E L LF++M G +PNE + L S
Sbjct: 155 EIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALS 214
Query: 387 ACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC D E IH F ++ + ++ + KCG + +A E +
Sbjct: 215 ACAQLGDFKEGEKIHGYIKVERFDMNAQVCNV--VIDMYAKCGFVDKAYLVFES-MSCRK 271
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSR 505
W + +HG+ A EL +D S P + A+
Sbjct: 272 DIVTWNTMIMAFAMHGE---GCKALELFEKMDQSGVSPDDVSY------LAVLCACNHGG 322
Query: 506 LVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
LVE E + N M+ P+ ++ +D LL + RL AY +
Sbjct: 323 LVE----------EGFRLFNSMENCGVKPNVKHYGSVVD-------LLGRAGRLHEAYDI 365
Query: 566 I-STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDY 622
+ S P + + + L H ++I + V R+L+ + G CGD+
Sbjct: 366 VNSMPTVPDIVLWQTLLGASRTHRNVEI-AETVSRKLV----------EMGSNHCGDF 412
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 208/408 (50%), Gaps = 36/408 (8%)
Query: 251 ADLARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFL-- 304
A LA Q G ++A+ + MD +G+ D F + + C K +H+ L
Sbjct: 308 ALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILTALREGKLLHEELLLA 367
Query: 305 -QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
Q I + L ++ Y KCG + +AR +FD MA + M+ YA +G E
Sbjct: 368 SQGEIFVEASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQSGRAGEAA 427
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
LF++ G+ P+ TF+++ SAC A ++ +F S+ +F ++P HY +V +
Sbjct: 428 DLFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDFALAPHAAHYTCMVDL 487
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
L + GHL + + ++ +PF+P W++L R HGD+ + +P + P
Sbjct: 488 LARTGHLMDGEDLLD-AMPFQPEYTAWKSLLAGCRTHGDVGRGARLARRATNANPVCSSP 546
Query: 484 ---------------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRD 517
K + +K +S + K R EF +P +
Sbjct: 547 YVLLSRLYDAAGKHGDGISVRKAMDARRLRKPAGLSSITIKGRAHEFVAGGKNHPEISAI 606
Query: 518 DEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART-PLR 575
++L +LN +M+E+ YVPDT VLHD D E KEQ+L +HSE+LA+ +G+IST R+ PL
Sbjct: 607 LDELHSLNAKMREAGYVPDTSNVLHDFDDEEKEQSLSFHSEKLAVVFGMISTRGRSDPLF 666
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLR+C DCH A K MSRI R + VRD RFHHF+DG C+C D+W
Sbjct: 667 VVKNLRMCTDCHTATKFMSRIAKRAITVRDAHRFHHFQDGACACADFW 714
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 322 YGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
YG G + A+ +FD D R + SW+ ++ ++ NG + L +F M G+ P+ +
Sbjct: 281 YGLHGEIARAKDLFDSAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGIS 340
Query: 381 FLAVFSACGSADAIEEA-FIHFESMKSEFG-ISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
F++ AC A+ E +H E + + G I LV KCG L EA+ +
Sbjct: 341 FVSALDACTILTALREGKLLHEELLLASQGEIFVEASLATALVNFYAKCGRLDEARSLFD 400
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
N + + F IR D N +I Y + T AR +FD R++ +W+ MI GYA
Sbjct: 100 NLAEARNLFNSMKIR-DAATWNVLIAGYTQRCLCTHAREIFDRAPVRNVVTWNTMIGGYA 158
Query: 355 DNGLGDEGLQLFEQMRKLGLQP--NEQTFLAVFSACGSADAIEEAFIHFESM 404
G D +LF GL P NE + A+ S G + +A F+++
Sbjct: 159 QAGHLDNATELF------GLMPQWNEVCWNALISGMGRNRRLPDALELFQAL 204
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 227/442 (51%), Gaps = 38/442 (8%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIE----LMD 270
S+ V G Q++ + + P D + ++ D Q G+ ++A+E +
Sbjct: 229 SWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMID--GYVQVGRFRDALETFRYMQI 286
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
V+AD ++ C E + Y + I+ D+ + N +I+MY KCGS+
Sbjct: 287 CKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIER 346
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF M +R +W +I G A NG G+E + +F +M + P+E TF+ V +AC
Sbjct: 347 ALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTH 406
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A +++ F SM + ISP HY L+ VLG+ G L EA I+ K+P +P + W
Sbjct: 407 AGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTID-KMPMKPNSTIW 465
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKI----PTP 489
L R++G+ ++ + A E +++LDP + D ++I
Sbjct: 466 GTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEK 525
Query: 490 PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH 541
KK S+++ + EF N +Y E + L ++ + YVPD VL
Sbjct: 526 GIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENV--LTDLRNAGYVPDVTEVLV 583
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
++ +E K++ L +HSE+LA+ + L+++ + +RI+KNLR+C DCHNAIK++S++ GRE+
Sbjct: 584 EVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREV 643
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
IVRD RFHHF+ G CSC DYW
Sbjct: 644 IVRDRTRFHHFRHGSCSCKDYW 665
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 38/202 (18%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ A A + ++ CG K +VH L+S + D + N +++MY +C
Sbjct: 150 VDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAEC 209
Query: 326 GSMTD-------------------------------ARRVFDHMADRSMDSWHLMINGYA 354
G M AR +FDHM +R +W MI+GY
Sbjct: 210 GDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYV 269
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE---AFIHFESMKSEFGIS 411
G + L+ F M+ ++ +E T ++V +AC A+E A I+ + + +
Sbjct: 270 QVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVF 329
Query: 412 PGTEHYLGLVGVLGKCGHLFEA 433
G L+ + KCG + A
Sbjct: 330 VGN----ALIDMYSKCGSIERA 347
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 214/392 (54%), Gaps = 29/392 (7%)
Query: 260 GKVKEAIELMDKGVKAD-ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
G V+ +E+ GV+ D A + + + +++H ++ ++++ N +
Sbjct: 302 GAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNAL 361
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KC + AR VF+ + R + SW M+ G A +G +E L L+++M G +PNE
Sbjct: 362 IDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNE 421
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + AC A +++ FESMK+E+GI+P +HY + +L + GHL EA++ +
Sbjct: 422 VTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELM- 480
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---------- 488
+P+EP W AL + + D ++ + +++L P + + +
Sbjct: 481 TTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWD 540
Query: 489 PPPKKRTAISILD-----GKSRL---VEFR------NPTLYRDDEKL---KALNQMKEST 531
K R + L+ G S + EFR P R++ + + + +M++
Sbjct: 541 SVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRG 600
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPDT V+HD+++ KE L HSERLA+A+GLI +P + +R++KNLRVC DCH +K
Sbjct: 601 YVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMK 660
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S I R+++VRD+ RFHHF+ GKCSC ++W
Sbjct: 661 LISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 692
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H +F+ S GD V+ + +++MY KCGS D R+VFD M+ ++ W +++GYA
Sbjct: 206 GRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 265
Query: 356 NGLGDEGLQLFEQM 369
NG +E LQLF M
Sbjct: 266 NGRSEEALQLFRSM 279
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 199/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + E +++H + L++ D + N +++MY KCG++ AR +FD + ++ + SW
Sbjct: 335 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 394
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+MI GY +G G E + F +MR G++P+E +F+++ AC + ++E + F M++
Sbjct: 395 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 454
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
I P +EHY +V +L + G+L +A +FI+ +P EP A W AL RI+ D+ L
Sbjct: 455 NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKM-MPIEPDATIWGALLCGCRIYHDVKLA 513
Query: 467 DHAEELMVDLDPS---------------------KADPKKIPTPPPKKRTAISILDGKSR 505
+ E + +L+P K ++I +K S ++ K +
Sbjct: 514 EKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGK 573
Query: 506 LVEF-----RNPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P + + LK +MKE + P RY L D KE AL HSE++
Sbjct: 574 VHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKI 633
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+G++S P +R+ KNLRVCGDCH K MS++V R++I+RD+ RFHHFKDG CSC
Sbjct: 634 AMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSC 693
Query: 620 GDYW 623
+W
Sbjct: 694 RGHW 697
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 198 PNQWNNQQNQGYPQARNSYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVAD----- 252
P+Q + + + YP N + P + P +N+ ++ G VLP D
Sbjct: 16 PHQIHRENSLTYP---NGFIFFRPSSKTPLVSSNLYHSC--ATIGTSVLPSETIDCKITD 70
Query: 253 ----LARLCQEGKVKEAIELMDKGVKADASC--FYTLFELCGNPKWYENAKKVHDYFLQS 306
+ R C+ G ++ A+EL+++ K D + ++ +LC + K ++ +++H +
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSN 130
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D VL +K++ MY CG + + RR+FD +A+ + W+L++NGYA G E L LF
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAI 394
++MR+LG++ E +F G D I
Sbjct: 191 KRMRELGIRRVESA-RKLFDELGDRDVI 217
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
L + + +L LNN +++MY K G++ A +VF+ M +RS+ SW MI GYA GL D +
Sbjct: 251 LATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 310
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVG 422
+LF +M K L PN T + AC S A+E IH +++ F + + LV
Sbjct: 311 RLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVD 368
Query: 423 VLGKCGHLFEAQQFIEQ 439
+ KCG L A+ +
Sbjct: 369 MYLKCGALGLARLLFDM 385
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 199/391 (50%), Gaps = 40/391 (10%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL G++ + C + E K +H + +S + +NN +++ Y KCG
Sbjct: 259 ELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCG 318
Query: 327 SMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
++ AR VF+ M + RS+ SW MI G A +G G+E +QLF +M + G++P+ F+++
Sbjct: 319 NVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISIL 378
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC A IE+ + +F MK + I P EHY +V + G+ G L +A +FI +P P
Sbjct: 379 YACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIH-MPVLP 437
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------------------- 478
TA W L IHG++ L + +E + +LDP
Sbjct: 438 TAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRR 497
Query: 479 SKADPKKIPTP----PPKKRTAISILDGKSRLVEFRNPTLYRDDEKLK--ALNQMKESTY 532
S D + TP + S + G E +N EKLK L E Y
Sbjct: 498 SMTDQRMNKTPGWSMIEVDKIMYSFVAG-----EVQNSITEEAYEKLKEIMLKLRVEGCY 552
Query: 533 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKI 592
+P+ VLHDI+ E KE ++ HSE+LA+A+G+ + +RI+KNLRVC DCH +K+
Sbjct: 553 IPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKL 612
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S++ G E++VRD RFH FK G CSC DYW
Sbjct: 613 ISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y K G + AR++F M + SW MI G+A NG E F +++++G++
Sbjct: 207 NVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMR 266
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PNE + SAC A AIE +H KS F + L+ KCG++ A+
Sbjct: 267 PNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNN--ALLDTYSKCGNVGMAR 324
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
E ++P + + W ++ +HG + A +L +++ S P I
Sbjct: 325 LVFE-RMPEKRSIVSWTSMIAGLAMHG---YGEEAIQLFHEMEESGIRPDGIA 373
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 286 LCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI--EMYGKCGSMTDARRVFDHMADRSM 343
L N + +N K+VH Y ++ + D ++ K++ ++ ARR+F H + +
Sbjct: 11 LLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDV 70
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ-TFLAVFSACGSADAIEEAF-IHF 401
+ +I G A++ L F +MR+ P + +F + A S ++E +H
Sbjct: 71 FMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHC 130
Query: 402 ESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
+++ T ++G LV + +CG + A++ E+ FEP W A+
Sbjct: 131 QAIVHGL----DTHLFVGTTLVSMYSECGFVAFAKKVFEEM--FEPNVVAWNAVVTACFR 184
Query: 460 HGDIDLED 467
GD+ D
Sbjct: 185 CGDVKGAD 192
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 209/404 (51%), Gaps = 35/404 (8%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ L + G +E++ L K ++ D + C + K +H + I
Sbjct: 84 LSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 143
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
DLVL +++MY KCGS+ A +VF M R++ +W+ MI G A +G G++ + LF+Q
Sbjct: 144 NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQ 203
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M L P++ TF+A+ AC A ++E F++MK++F I P EHY +V +L +
Sbjct: 204 MEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRAR 263
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP----- 483
+ +A FIE +P + + W L R G DL + +++L+P
Sbjct: 264 KVDDALAFIEN-MPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLS 322
Query: 484 ----------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDE 519
K++ +K S ++ + +F + +Y E
Sbjct: 323 NLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 382
Query: 520 KLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
++ + + +VP T VL DI++E KE +L HSE+LAIA GLISTP+ +P+RI+KN
Sbjct: 383 EMTRRVNL-DGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKN 441
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH+ +K+ S++ RE++ RD RFHHFK+G CSC D+W
Sbjct: 442 LRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
++ D +L C E K +H Y + + +L +NN +++MY KC + A+
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
VF+ + ++ + SW M++G A +G E L LF +M+ ++P+E T + V SAC
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 393 AIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL-FEAQQFIEQKLPFEPTAEFW 450
A+++ +IH + +F I+ LV + KCG + Q F ++ T W
Sbjct: 127 ALDQGKYIHL--LIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT---W 181
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISIL 500
A+ +HG H E+ + D + D P T I++L
Sbjct: 182 NAMIGGLAMHG------HGEDAISLFDQMEXDK-----LMPDDVTFIALL 220
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 202/355 (56%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K++H +++ + ++N +I +Y KCG++ DA R F M +++ SW+ M+ GY+
Sbjct: 694 GKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQ 753
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G + L LFE M++LG+ PN TF+ V SAC ++E +F+SM+ G+ P E
Sbjct: 754 HGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPE 813
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ G L A++F+E+ +P +P A L + +H +ID+ + A +++
Sbjct: 814 HYACVVDLLGRSGLLSRARRFVEE-MPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLE 872
Query: 476 LDPSKADP---------------------KKIPTPPPKKRTAISILDGKSRLVEF----- 509
L+P + + + KK S ++ + + F
Sbjct: 873 LEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQ 932
Query: 510 RNPTLYRDDEKLKALNQM-KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
++P + + E L+ LN++ E+ Y+P T +L+D ++ K + HSE+LAIA+GL+S
Sbjct: 933 KHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSL 992
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ TP+ + KNLRVCGDCHN IK +S+I R ++VRD+ RFHHFK G CSC DYW
Sbjct: 993 SSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 65/124 (52%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
++GV+A++ + L + C + W+ + K+H L+ ++VL +++++Y G +
Sbjct: 61 ERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLD 120
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
A VFD M R + W+ +++ + + L LF +M + ++P+E+T+ V CG
Sbjct: 121 GAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG 180
Query: 390 SADA 393
D
Sbjct: 181 GGDV 184
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 250 VADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA L+ L Q G +EA+ L GV F ++ C ++Y+ +++H L+
Sbjct: 240 VAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLK 299
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + N ++ +Y + G+ A +VF+ M R S++ +I+G + G D+ L+L
Sbjct: 300 QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALEL 359
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F++M L+P+ T ++ SAC S A+ F S + G+S L+ +
Sbjct: 360 FKKMCLDCLKPDCVTVASLLSACSSVGALLVG-KQFHSYAIKAGMSSDIILEGALLDLYV 418
Query: 426 KCGHLFEAQQFI 437
KC + A +F
Sbjct: 419 KCSDIKTAHEFF 430
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ L Q+G +A+EL K +K D +L C + K+ H Y +++ +
Sbjct: 344 ISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGM 403
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD---EGLQL 365
D++L ++++Y KC + A F ++ W++M+ Y GL D E ++
Sbjct: 404 SSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAY---GLLDNLNESFKI 460
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL-GLVGV 423
F QM+ G++PN+ T+ ++ C S A++ IH + +K+ F + L +
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 520
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTA 447
LGK H + + +++K TA
Sbjct: 521 LGKLDHALKIFRRLKEKDVVSWTA 544
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G++ + + ++ C + + + +++H L++ + ++ +++ +I+MY K G +
Sbjct: 467 EGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDH 526
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A ++F + ++ + SW MI GYA + E L LF++M+ G+ + F + SAC
Sbjct: 527 ALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAG 586
Query: 391 ADAIEEA-FIHFESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEA 433
A+ + IH ++ S + +S G LV + +CG + +A
Sbjct: 587 IQALNQGQQIHAQACVSGYSDDLSVGN----ALVSLYARCGKVRDA 628
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ + VK D + + CG + +K+H + L + N +I++Y K G
Sbjct: 160 MLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A++VFD + R SW M++G + +G +E + LF QM G+ P F +V S
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279
Query: 387 AC 388
AC
Sbjct: 280 AC 281
>gi|125528625|gb|EAY76739.1| hypothetical protein OsI_04695 [Oryza sativa Indica Group]
Length = 494
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 205/428 (47%), Gaps = 56/428 (13%)
Query: 227 NQLNNVPNNMNQCPAGDQVLPPS-VADLARLCQEG-KVKEAIELMDKGVKADASCFYTLF 284
++L ++ P D V S V LAR G V+ +++ GV D +
Sbjct: 92 SRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVL 151
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
C E + VH ++S L + N ++ MY K GS+ DAR VFD M R
Sbjct: 152 SSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAI 211
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM 404
+W +I G P+ TF+ + AC A ++ HF+SM
Sbjct: 212 TWTALIVG-----------------------PDYVTFVGLLFACSHAGLLDAGRAHFQSM 248
Query: 405 KSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDID 464
+SE GISPG +HY +V +LG+ G L EA +++ E A W+AL R H +
Sbjct: 249 QSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAA 308
Query: 465 LEDHAEELMVDLDPSKADPKKIPT---------------PPPKKRTAISILDGKSRLVEF 509
L + A ++ LDP+ A P + + + IS G S +V
Sbjct: 309 LAERAAGMVWRLDPTDAVPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVA 368
Query: 510 --------------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYH 555
R +YR E++ A +++ +VPDT + L D E +E L +H
Sbjct: 369 GVTHVFHAGDRDHQRAAEIYRKAEEMAA--RIRARGHVPDTEWALQDEAPEGREMGLAHH 426
Query: 556 SERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 615
ERLA+A+GL++ PA P+R+ KNLRVCGDCH AIK+++ + GRE+I+RD+ FHH KDG
Sbjct: 427 GERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDG 486
Query: 616 KCSCGDYW 623
CSCGDYW
Sbjct: 487 SCSCGDYW 494
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 221/417 (52%), Gaps = 34/417 (8%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWY 293
Q AGD + ++ ++ Q G +EA+ + + G+ ++ F + +
Sbjct: 634 QTEAGDNIAWNAL--VSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANM 691
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ K+VH ++ + + N +I MY KCGS++DA++ F ++ ++ SW+ MIN Y
Sbjct: 692 KQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAY 751
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG 413
+ +G G E L F+QM ++PN T + V SAC +++ +FESM +E+G++P
Sbjct: 752 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPK 811
Query: 414 TEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELM 473
EHY+ +V +L + G L A+ FI + +P EP A W L + +H ++++ + A +
Sbjct: 812 PEHYVCVVDMLTRAGLLSRAKDFILE-MPIEPDALVWRTLLSACVVHKNMEIGEFAAHHL 870
Query: 474 VDLDPS----------------KADPK-----KIPTPPPKKRTAISILDGKSRLVEF--- 509
++L+P K D + K+ KK S ++ K+ + F
Sbjct: 871 LELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 930
Query: 510 --RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
+P E K L + E YV D +L ++ QE K+ + HSE+LAI++GL+
Sbjct: 931 DQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLL 990
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S PA P+ ++KNLRVC DCH+ IK +S++ RE+IVRD RFHHF+ G CSC DYW
Sbjct: 991 SLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++D+G+++D C + + +++H S DL N ++ +Y KCG
Sbjct: 564 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCG 623
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF-LAVF 385
++ +A F+ +W+ +++G+ +G +E L++F +M + G+ N TF AV
Sbjct: 624 NIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVK 683
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA-QQFIEQKLPFE 444
+A +A+ + +H ++ ++ G TE ++ + KCG + +A +QF+E + E
Sbjct: 684 AASETANMKQGKQVH--AVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNE 741
Query: 445 PTAEFWEALRNYARIHG 461
+ W A+ N HG
Sbjct: 742 VS---WNAMINAYSKHG 755
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 68/134 (50%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C+ ++ ++ G+ F ++ C + E +++H L+ D + N
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +Y GS+ A +F +M+ R +++ +ING + G G++ ++LF++M+ GL+P
Sbjct: 311 ALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEP 370
Query: 377 NEQTFLAVFSACGS 390
+ T ++ AC S
Sbjct: 371 DSNTLASLVVACSS 384
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 250 VADLARLCQEGKVKEAI-ELMDKGVKADASCFYTLFELC-GNPKWYENAKKVHDYFLQST 307
+ +LA GKV ++++ V + F + E C G ++ +++H +
Sbjct: 141 IKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQG 200
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ ++ N +I++Y + G + ARRVFD + + SW MI+G + N E ++LF
Sbjct: 201 LGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFC 260
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M LG+ P F +V SAC +++E + + G S T LV +
Sbjct: 261 DMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHL 319
Query: 428 GHLFEAQQF 436
G L A+
Sbjct: 320 GSLISAEHI 328
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + C E +++H ++++ + + + + +I+MY K G + A + A +
Sbjct: 478 SILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 537
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW MI GY D+ L F QM G++ +E SAC A++E IH
Sbjct: 538 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 597
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLP------------FEPTAE 448
++ S G S LV + KCG++ EA EQ F+ +
Sbjct: 598 AQACVS--GFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGN 655
Query: 449 FWEALRNYARIH 460
EALR +AR++
Sbjct: 656 NEEALRVFARMN 667
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ +K+H L+ + L+ K+++ Y G + A +VFD M +R++ +W+ MI
Sbjct: 85 DEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKEL 144
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC--GSA--DAIEE 396
A L + LF +M + PNE TF V AC GS D +E+
Sbjct: 145 ASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQ 191
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G ++A+EL + G++ D++ +L C + + +++H Y + +
Sbjct: 347 LSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASN 406
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE---GLQLFEQ 368
+ ++ +Y KC + A F ++ W++M+ Y GL D+ ++F Q
Sbjct: 407 DKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQ 463
Query: 369 MRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEF 408
M+ + PN+ T+ ++ C G + E+ IH + +K+ F
Sbjct: 464 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQ--IHSQIIKTSF 504
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 215/404 (53%), Gaps = 33/404 (8%)
Query: 251 ADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +++L Q G EA+ L G+ ++ C + + K +H + L+
Sbjct: 275 ALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILR- 333
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
T+ D ++ VI+MY KCGS++ A+ +FD + R + SW++MI +G G + L LF
Sbjct: 334 TLELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLF 393
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
++M++ ++P+ TF ++ SA + +EE F M +E+GI PG +H + +V +L +
Sbjct: 394 QEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLAR 453
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
G + EA + L +PT AL + + ++L + E +++L P +
Sbjct: 454 SGLVEEANGLVAS-LHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLAL 512
Query: 487 PTPPP-------KKRTAISILD--GKSRL-----VEFRNP--TLYRDDEK---------- 520
+ K R ++ G + +E R T +D+
Sbjct: 513 VSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQM 572
Query: 521 -LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
+K ++M++ Y+P T +V HD+++ KEQ L HSERLA A+GL++T T L +IKN
Sbjct: 573 VMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKN 632
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVCGDCH+AIK MS+I RE++VRD KRFHHFKDG CSCGDYW
Sbjct: 633 LRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G+ +AIE+ + G++AD + + C VH Y L+ ++ D+V++
Sbjct: 183 GQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVIS 242
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++MY K G ARRVF+ M R+ SW +I+ A G DE L LF M+ GL
Sbjct: 243 TSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLH 302
Query: 376 PNEQTFLAVFSACGSADAIEEA-FIHFESMKS-EFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN + AC ++ IH +++ E GT ++ + KCG L A
Sbjct: 303 PNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMVGT----AVIDMYSKCGSLSSA 358
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHG 461
Q ++ + + + W + HG
Sbjct: 359 QMLFDKVVSRDLIS--WNVMIACCGAHG 384
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D++ F C + V D + D+ + + V+ +Y KCG+M DA +VF
Sbjct: 102 DSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVF 161
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAI 394
D M R +W M+ G+ + G + ++++ +MR+ GL+ +E + V AC + DA
Sbjct: 162 DRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDAR 221
Query: 395 EEAFIH 400
A +H
Sbjct: 222 MGASVH 227
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 199/344 (57%), Gaps = 29/344 (8%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ ++F C + E K VH + ++S ++ + N +++MY K GS+ DA+RVFD +
Sbjct: 293 YSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV 352
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
+ SW+ M+ G A +GLG E L FEQM ++G++PNE +FL V +AC + ++E
Sbjct: 353 KPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLY 412
Query: 400 HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARI 459
+FE MK ++ + P HY+ V +LG+ G L A++FI + +P EPTA W AL R+
Sbjct: 413 YFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE-MPIEPTAAVWGALLGACRM 470
Query: 460 HGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRTAIS 498
H +++L +A E +LDP + P K + KK+ A S
Sbjct: 471 HKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
Query: 499 ILDGKSRLVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQAL 552
++ ++ + F +P + K + ++ ++KE YVPDT +VL +DQ+ +E+ L
Sbjct: 531 WVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKL 590
Query: 553 LYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
YHSE+LA+A+ L++TP +P+RI KN+RVCGDCH AIK +S+I
Sbjct: 591 QYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 252 DLARLCQE--GKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQS-T 307
DL R Q G A++L+ +G + D + + L + C E + VH + + S
Sbjct: 59 DLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF 118
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ LVL N ++ MY KCG + DARR+FD M + M +W +I G++ N + L LF
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFP 178
Query: 368 QMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
QM +LGLQPN T ++ A GS ++ + ++G LV + +C
Sbjct: 179 QMLRLGLQPNHFTLSSLLKASGSEHGLDPG-TQLHAFCLKYGYQSSVYVGSALVDMYARC 237
Query: 428 GHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
GH+ +A Q +P + + + +AR
Sbjct: 238 GHM-DAAQLAFDGMPTKSEVSWNALISGHAR 267
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLF 284
L++ ++ P D V A +A Q + ++A+ +++ G++ + +L
Sbjct: 139 LDDARRMFDEMPTKDMV--TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196
Query: 285 ELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD 344
+ G+ + ++H + L+ + + + + +++MY +CG M A+ FD M +S
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFES 403
SW+ +I+G+A G G+ L L +M++ QP T+ +VFSAC S A+E+ ++H
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHM 316
Query: 404 MKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+KS + ++G L+ + K G + +A++ ++ + +P W + HG
Sbjct: 317 IKSGLKLIA----FIGNTLLDMYAKAGSIDDAKRVFDRLV--KPDVVSWNTMLTGCAQHG 370
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 212/400 (53%), Gaps = 36/400 (9%)
Query: 258 QEGKVKEAIELMD--KGVKA--DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G ++ IE+ K KA D+ F C + ++V + + +
Sbjct: 183 QNGLAEQGIEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVF 242
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L + ++ MY +CG + AR+ FD + +R++ +W MI GY +G G E ++L+ MR G
Sbjct: 243 LGSALVNMYARCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKG 302
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
PN+ TF+AV SAC A I E F MK +G++P EHY +V + G+ G L EA
Sbjct: 303 PPPNDVTFVAVLSACAHAGLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEA 362
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
QFI +P +P E W A+ ++H + L E ++ L+P
Sbjct: 363 MQFIRDSMPGDPGPEVWTAILGACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYAL 422
Query: 483 ------PKKIPTPPPKKRTAISI------LDGKSRLVEF------RNPTLYRDDEKLKAL 524
+K+ K+R I L G S L + +Y+ E+L +
Sbjct: 423 SGKMYHVEKVRNTMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQKTREIYQYLEEL--V 480
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL-ISTPARTPLRIIKNLRVC 583
+++ + Y+P+T VLH++++E +E AL YHSE+LA+AYGL +S + TPLR+IKNLR+C
Sbjct: 481 HRISAAGYMPETESVLHELEEEEREGALRYHSEKLAVAYGLMMSAGSTTPLRVIKNLRIC 540
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH AIK MS + RE+IVRD RFHHFKDGKCSC +YW
Sbjct: 541 SDCHLAIKFMSAVENREIIVRDKHRFHHFKDGKCSCLEYW 580
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 240 PAGDQVLPPSVADLARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYEN 295
PA D L S+A A +G A+ L+ + + F + + C +
Sbjct: 66 PASDSFLFSSLARAAT--HQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRT 123
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
VH + + D + ++ +Y KCG + AR++FD + D+++ +W+ MI+GY
Sbjct: 124 GMTVHAHSILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQ 183
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE---EAFIHFESMKSEFGISP 412
NGL ++G++++++M+ P+ TF+A SAC A A++ E S + + +
Sbjct: 184 NGLAEQGIEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFL 243
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIE 438
G+ LV + +CG + +A+Q+ +
Sbjct: 244 GS----ALVNMYARCGVVDKARQWFD 265
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 203/392 (51%), Gaps = 28/392 (7%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EG ++ + GV AD F + C + +++H +++ + + + +
Sbjct: 256 EGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCL 315
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY +CG + D+ RVF MI+ Y +G G + ++LF+QM G +P++
Sbjct: 316 VHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSD 375
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TFLA+ AC + EE FE M +G+ P +HY +V +LG+ G L EA+ I
Sbjct: 376 VTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALI- 434
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------------- 483
+P P W+ L + + + D+ + + +++LDP +
Sbjct: 435 LSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWG 494
Query: 484 ------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQMKEST 531
K + +K +S ++ K + +F +P DE L+ + ++++
Sbjct: 495 DVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCG 554
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y PD VLHD++ E KE +L +HSE+LAIA+ +S P P+R++KNLRVC DCH AIK
Sbjct: 555 YSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIK 614
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+MS++ GRE++VRD RFHHFKDG+CSC DYW
Sbjct: 615 LMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+++ +G+ D ++F C + ++VH Y ++S + D+ + + + MY +C
Sbjct: 162 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + + V + S+ S + +I G NG + L+ F MR +G+ + TF++
Sbjct: 222 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 281
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
S+C A+ + IH + MK+ G+ LV + +CG L ++++
Sbjct: 282 SSCSDLAALAQGQQIHGQVMKA--GVDKVVPVMTCLVHMYSRCGCLGDSER 330
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 252 DLARLCQEGKVKEAIELMDKGVK-ADASCFYT-LFELCGNPK-------WYENAKKVHDY 302
+ RLC G++++A+ +GV +DA+ ++ LF C + + + D
Sbjct: 17 EFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDR 76
Query: 303 F------LQSTIRGDLVLNNKVIEM---------------YGKCGSMTDARRVFDHMADR 341
F L GDL ++ E Y K G + AR++FD M +R
Sbjct: 77 FTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPER 136
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIEEAFIH 400
++ +W+ M+ G + G +E L F MR+ G+ P+E +VF C G D + +H
Sbjct: 137 NVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVH 196
Query: 401 FESMKS 406
++S
Sbjct: 197 AYVVRS 202
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 202/393 (51%), Gaps = 39/393 (9%)
Query: 264 EAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+EL G + DA ++ CG+ KK+H Y + + +L+L N +I
Sbjct: 293 EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG + AR VF++M R + SW MI+ Y +G G + + LF +M+ GL P+
Sbjct: 353 DMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+ +AC A +EE F+ M + I+P EH +V +LG+ G + EA +FI Q
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFI-Q 471
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------------ 481
++P EP W AL R+H + D+ A + + L P ++
Sbjct: 472 EMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 531
Query: 482 --------DPKKIPTPPPKKRTAISILDGKSRLVEFRNP---TLYRDDEKLKALNQMKES 530
K + P ++ + + + +P +YR+ + L + +MKE
Sbjct: 532 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVL--VKKMKEL 589
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP---ARTPLRIIKNLRVCGDCH 587
YVPD+ LHD+++E KE L HSE+LAI + L++T + +RI KNLR+CGDCH
Sbjct: 590 GYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCH 649
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
A K++S+I RE+I+RD RFH F+ G CSC
Sbjct: 650 VAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ VH + +R + L K++ Y + AR+VFD + +R++ ++MI Y +N
Sbjct: 60 RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNN 119
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIHFESMKSEFGISPGTE 415
G EG+Q+F M ++P+ TF V AC S + + IH + K G+S
Sbjct: 120 GFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATK--VGLSSTLF 177
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
GLV + GKCG L EA+ +++
Sbjct: 178 VGNGLVSMYGKCGFLSEARLVLDE 201
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VK D F + + C KK+H + + L + N ++ MYGKCG +++AR
Sbjct: 137 VKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 196
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
V D M+ R + SW+ ++ GYA N D+ L++ +M + + + T ++ A
Sbjct: 197 LVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 251
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 210/396 (53%), Gaps = 33/396 (8%)
Query: 260 GKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +A+E+ + G++ D ++ + + K++H + ++ + ++
Sbjct: 441 GLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSIS 500
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +++MY +CGS+ DA ++F +R++ W MI+ Y +G G+ ++LF +M+ +
Sbjct: 501 NTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKII 560
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TFLA+ AC + + E E MK E+ + P EHY LV +LG+ L EA Q
Sbjct: 561 PDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQ 620
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------------KADP 483
+ + + EPT E W AL RIH + ++ + A E +++LD A+
Sbjct: 621 IV-KSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANG 679
Query: 484 KKIPTPPPKKRTAISILDGK--SRLVEFRNPT---LYRD------DEKLKALNQM----- 527
+ + R S L +E N L RD D+ + L Q+
Sbjct: 680 RWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLK 739
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
+E YV T++VLH++ +E K Q L HSERLAIAYGL++T TP+R+ KNLRVCGDCH
Sbjct: 740 REGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCH 799
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ ++SR RELIVRD RFHHFKDG CSCGD+W
Sbjct: 800 SFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 27/236 (11%)
Query: 264 EAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL---VLNN 316
+A+EL+ +G+ DA+ ++ C K++H Y TIRG L VL N
Sbjct: 345 QALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGY----TIRGGLSDPVLQN 400
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+I++YG+CG + A R+F+ + + + SW MI+ Y NGL ++ L++F M++ GL+P
Sbjct: 401 TIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEP 460
Query: 377 NEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ T +++ SA S +++ IH ++ F + + LV + +CG + +A +
Sbjct: 461 DYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYK 518
Query: 436 FIEQKLPFEPTAE----FWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIP 487
F T W A+ + +HG + A EL + + K P I
Sbjct: 519 I------FTCTKNRNLILWTAMISAYGMHG---YGEAAVELFMRMKDEKIIPDHIT 565
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MYGKCGS+ DA +FD M++RS+ +W+ M+ GY NG L+++ +MR LG+ + T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 381 FLAVFSACGSA-DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F + ACG D A IH ++K +G LV + KC + A++ ++
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIK--YGCDSFVFVVNSLVALYAKCNDINGARKLFDR 118
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ GV D+ F L + CG + ++H ++ + + N ++ +Y KC
Sbjct: 48 EMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCN 107
Query: 327 SMTDARRVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ AR++FD M R+ + SW+ +I+ Y+ NG+ E L LF +M K G+ N TF A
Sbjct: 108 DINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAAL 167
Query: 386 SACGSADAIEEAF-IHFESMKS 406
AC + I+ IH +KS
Sbjct: 168 QACEDSSFIKLGMQIHAAILKS 189
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 253 LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L Q G EA+E L + +K D ++ G + N K++H Y +++
Sbjct: 233 LTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGF 292
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
++++ N +I+MY KC M+ R FD MA + + SW GYA N + L+L Q
Sbjct: 293 DSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQ 352
Query: 369 MRKLGLQPNEQTFLAVFSAC 388
++ G+ + ++ AC
Sbjct: 353 LQMEGMDVDATMIGSILLAC 372
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 260 GKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G EA+ E++ GV + F + C + + + ++H L+S D+ +
Sbjct: 139 GMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVA 198
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ MY + G M +A +F ++ + + +W+ M+ G+ NGL E L+ F ++ L+
Sbjct: 199 NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLK 258
Query: 376 PNEQTFLAVFSACG 389
P++ + +++ A G
Sbjct: 259 PDQVSIISIIVASG 272
>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
Length = 948
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 207/396 (52%), Gaps = 36/396 (9%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENA-KKVHDYFLQSTIRGDLVLNNKV 318
G V A + G + + + C + E A +KVH + D + V
Sbjct: 557 GAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAV 616
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG---LGDEGLQLFEQMRKLGLQ 375
+ MY K GS+ +A FD + + + +W M+ Y G D L+L M++ G+
Sbjct: 617 MRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVM 676
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ TF+ + +AC ++EA +F+ MK ++G+ P EHY+ LV + + G+L EA+
Sbjct: 677 PDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAED 736
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD----LDPSKADPKKIPTP-P 490
I + +P + W AL + D E+++ LDP ++
Sbjct: 737 LI-RMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTGAHRVAARWE 795
Query: 491 PKKRTAISILD-------GKSRLVEFRNPT---------------LYRDDEKLKALNQMK 528
KR + D GKS ++ +N +Y + +++ AL +K
Sbjct: 796 EAKRVRKLMTDRGIKKEPGKS-MISIKNTVHGFVAGDRSHPHTREIYAEVDRITAL--IK 852
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ Y+PDTRYVLHD+ ++ KE+ L YHSERLA+AYG ++TP PLR+IKNLRVCGDCH
Sbjct: 853 KDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDCHT 912
Query: 589 AIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
A K+ ++++ RE+IVRDN+RFHHF KDG CSCGDYW
Sbjct: 913 ASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 265 AIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
A++L D+ GV D CF T+ + K++H L + D ++ V++
Sbjct: 253 ALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVK 312
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY + GS+ DA R FD + + +W +++ Y G + +Q+ E+M G++PNE T
Sbjct: 313 MYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVT 372
Query: 381 FLAVFSAC 388
F+ + C
Sbjct: 373 FITILDTC 380
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 17/253 (6%)
Query: 222 GHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARL----CQEGKVKEAIELMDK----GV 273
G + + + + C A D++ P VA L C+ G ++++++ GV
Sbjct: 307 GTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGV 366
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFL---QSTIRGDLVLNNKVIEMYGKCGSMTD 330
K + F T+ + C N E+ KK+ Q ++ + VI M+ + SM
Sbjct: 367 KPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR FD ++ +S+ ++ MI GYA+N E L +F++M + + + SAC S
Sbjct: 426 AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+EE +H +M + G+ LV + +CG + +A + P
Sbjct: 486 IPDLEEGKALHCSAM--DLGLHRDDVVRTALVDMYSRCGSMEDASAVFGE--IERPDTVA 541
Query: 450 WEALRNYARIHGD 462
W A+ HGD
Sbjct: 542 WSAMIAALGRHGD 554
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ + V AD C + E K +H + + D V+ +++MY +CG
Sbjct: 463 EMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCG 522
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DA VF + +W MI +G + + +M++ G +P+ T + V +
Sbjct: 523 SMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLA 582
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A IEEA S+ + G E ++ + K G + EA ++ P
Sbjct: 583 ACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDK--IENPD 640
Query: 447 AEFWEA-LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ W L Y R+ G + D A +L + P K+
Sbjct: 641 VKAWTTMLEAYCRL-GKYNASDRALKLARMMQQDGVMPDKV 680
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + + +LC + +VHD+ +S + + + N ++ MY G+ +ARR+F
Sbjct: 62 DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF-LAVFSACGSADAI 394
D + ++ S+ ++ Y G DE L++ R + + +AV +A D
Sbjct: 122 DGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLS 181
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF--WEA 452
F H + + + G + L+G+ CG + A Q ++ P+++ W
Sbjct: 182 LGRFFHDTIRRCGYDLDAGVA--ISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTK 239
Query: 453 LRNYARIH----GDIDLEDHAEE 471
+ H G +DL D E
Sbjct: 240 ILAACNEHRDYIGALDLFDRMRE 262
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 193/355 (54%), Gaps = 34/355 (9%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH-MADRSMDSWHLMINGYADNGL 358
H Y + I D L++ +I MY KCG + A VF++ A RS+D+W+ M+ G+ +G
Sbjct: 231 HAYVCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGC 290
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
+ L+LF +M G PN+ TF + +AC +EE +FE M + I P HY
Sbjct: 291 SERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYG 350
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+V + + G LFE + + Q +P EP A W+AL R + + +L A +++ P
Sbjct: 351 CMVDLFCRAG-LFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAP 409
Query: 479 S----------------------KADPKKIPTPPPKKRTAISI-LDGKSRLVEF----RN 511
+ K + K + SI LDG + EF ++
Sbjct: 410 NDHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGV--IHEFISGDKS 467
Query: 512 PTLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQE-AKEQALLYHSERLAIAYGLIST 568
+ RD ++ + Q+K + Y PDT VL DID E KE +L HSERLA+A+GLIST
Sbjct: 468 HSRKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLIST 527
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP+RI+KNLRVCGDCHNAIK++S+I GR ++VRD RFH F++G CSCGDYW
Sbjct: 528 APGTPIRIVKNLRVCGDCHNAIKLLSKIYGRCIMVRDANRFHRFREGSCSCGDYW 582
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 91/252 (36%), Gaps = 39/252 (15%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ G D + C + Y A ++H + + + N +I Y CG
Sbjct: 66 LLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIHAYSVCGM 125
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYAD-------------------------------N 356
+ DAR+VFDH + M +W+ ++ GYA N
Sbjct: 126 LFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTVIAWCVAN 185
Query: 357 GLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGT 414
G +E + +F +M QP+ T ++V SA A+ + + H + E +
Sbjct: 186 GEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKEIEVDEKL 245
Query: 415 EHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMV 474
L+ + KCG + A E + + W A+ G + A EL
Sbjct: 246 SS--ALINMYSKCGFIEGAVYVFENSCALR-SVDTWNAMLAGFTASG---CSERALELFT 299
Query: 475 DLDPSKADPKKI 486
++ S P KI
Sbjct: 300 RMESSGFVPNKI 311
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 211/399 (52%), Gaps = 35/399 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G + EA+ L K G++ D+ + K++H + ++ +
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGA 602
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY CGSM A +VFD + + W MIN +G G + + +F++M + G
Sbjct: 603 VVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETG 662
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P+ +FLA+ AC + ++E + + M S++ + P EHY +V +LG+ G EA
Sbjct: 663 VSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEA 722
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
+FI + +P EP + W AL RIH + +L A + +++L+P
Sbjct: 723 YKFI-KSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAE 781
Query: 480 -------KADPKKIPTPPPKKRTAISILDGKSRLVEF--RNPTLYRDDE----KLKALNQ 526
K K+ +K A S ++ + + F R+ + +RD + KL + +
Sbjct: 782 MGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHS-HRDSQAIHLKLAEITE 840
Query: 527 M--KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+E YV DT +VLHD+ +E K L HSERLAI++GLIST + TPLRI KNLRVCG
Sbjct: 841 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 900
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH K++S++ RE++VRD RFHHF G CSCGD+W
Sbjct: 901 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+K D ++ E C K K+VH Y +++ + DL+L N++I++YG+CG +
Sbjct: 460 EGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCY 518
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F+ + + + +W M+N +A+NGL E + LF +M G+QP+ + + A
Sbjct: 519 ALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAG 578
Query: 391 ADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL-FEAQQFIEQKLPFEPTAE 448
++ + IH ++ +F + LV + CG + + + F E K
Sbjct: 579 LSSLTKGKEIHGFLIRGKFPVEGAVVS--SLVDMYSGCGSMNYALKVFDEAKC---KDVV 633
Query: 449 FWEALRNYARIHG 461
W A+ N +HG
Sbjct: 634 LWTAMINATGMHG 646
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 246 LPPSVA--DLARLCQEGKVKEAI-ELMDKGVKADA----SCFYTLFELCGNPKWYENAKK 298
LPP+ A L +LC++G ++EA+ +L + + A + + +L + ++
Sbjct: 17 LPPASAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQ 76
Query: 299 VHDYFLQSTIRGD---LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+H + + + GD L K++ MYGKCG + DA R+FD M R++ SW+ +I
Sbjct: 77 LHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLS 136
Query: 356 NGLGDEGLQLFEQMRK----LGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGI 410
+G E + ++ MR G P+ T +V ACG+ D + +H ++KS G+
Sbjct: 137 SGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKS--GL 194
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
T LVG+ KCG L A + E
Sbjct: 195 DRSTLVANALVGMYAKCGLLDSALRVFE 222
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G D ++ + CG +VH ++S + ++ N ++ MY KCG + A
Sbjct: 158 GAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSA 217
Query: 332 RRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
RVF+ M D R + SW+ I+G NG+ E L LF +M+ G N T + V C
Sbjct: 218 LRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVC 275
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ G D +C +L G+ N ++VH Y ++ + DL + N +++MY KC
Sbjct: 355 EMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCY 414
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ + RVFD M + SW +I YA + E + F +K G++ + ++
Sbjct: 415 SVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILE 474
Query: 387 ACGSADAI 394
AC +I
Sbjct: 475 ACSGLKSI 482
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G EA++L + G ++ + ++C + +++H L+ + +
Sbjct: 242 QNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN-I 300
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N ++ MY +CG + A RVF + D+ SW+ M++ Y N L E + F +M + G
Sbjct: 301 QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNG 360
Query: 374 LQPNEQTFLAVFSACG 389
P+ +++ SA G
Sbjct: 361 FNPDHACIVSLLSAVG 376
>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 204/391 (52%), Gaps = 39/391 (9%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G++ L C K++H + L+ G++V++ +I+MY K G
Sbjct: 481 EMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAG 540
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+T A+RVF + +++ + M+ G A +G E LF M + GL+P+ TF A+ +
Sbjct: 541 SLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLT 600
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC S + EA+ + + M++++G++P EH+ +V +L + G+L EA FIE+ P EP
Sbjct: 601 ACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLDEAMTFIERS-PAEPG 659
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------------- 478
A W AL IHG++DL + A + L+P
Sbjct: 660 ASSWGALLTGCAIHGNLDLAESAARHLFKLEPHNSANYLAMMSLYEQHQMFDEAESLKYA 719
Query: 479 -----SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYV 533
A P T + + G S E P +Y DE + ++QM+ YV
Sbjct: 720 MKARGVDARPGWSWTQAGRSIHVFEVDGGSSPHPE--TPEIY--DEMSRLVSQMRMVGYV 775
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRVCGDCHNAIKI 592
PDT + +D+ +E KE LL H+E+LA+ YGLI S +R P+R++KN R+C DCH IK
Sbjct: 776 PDTGCIAYDVPEEEKELLLLCHTEKLAVVYGLIRSDKSRAPVRVVKNTRMCRDCHEVIKH 835
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S + GR++I+RD RFHHF DGKCSC DYW
Sbjct: 836 VSALCGRQIILRDASRFHHFVDGKCSCDDYW 866
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ + G+ +EA+ ++++G+ DA+ +L + N + +VH +FL+ +
Sbjct: 292 LSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGL 351
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D +++MY KCG + A+RVFD + R++ +W+ ++ G+A+ G D L+L E
Sbjct: 352 SPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEA 411
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M++ + PN T+ + + +A + +KS G++P + L+ G C
Sbjct: 412 MKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSA-GVAPNVVSWTSLIS--GSC 467
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA---------DRSMDSWHLMINGY 353
L T +V N VI + G + DA + + MA + ++ +W+ +++G
Sbjct: 236 VLLRTAGAGVVAWNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGC 295
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP 412
A +G E L + +M + G+ P+ T ++ + ++ ++ +H ++ G+SP
Sbjct: 296 ARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLR--HGLSP 353
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIE 438
LV + KCG L AQ+ +
Sbjct: 354 DAYTGTALVDMYAKCGRLDIAQRVFD 379
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 199/355 (56%), Gaps = 38/355 (10%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
K+H +++++ D+ + +I++YGKCG + DA +F + + W+ +I +G
Sbjct: 447 KIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHG 506
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G+E LQLF+ M ++ + TF+++ SAC + ++E F+ M+ E+GI P +HY
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY 566
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +LG+ G+L +A + + + +P +P A W AL + +I+G+ +L A + ++++D
Sbjct: 567 GCMVDLLGRAGYLEKAYELV-RNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVD 625
Query: 478 P--------------------------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRN 511
S A + + P + K+ + N
Sbjct: 626 SENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG---SKAEVFYTGN 682
Query: 512 PT------LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
T +Y++ + L A +MK YVPD +V DI+++ KEQ L HSERLAIA+G+
Sbjct: 683 QTHPKYTEIYKELKVLSA--KMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGI 740
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
ISTP R+P+RI KNLRVCGDCHNA K +SRI RE++VRD+ RFHHFKDG CSC
Sbjct: 741 ISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A ++ CQ G A+ ++++ GVK D ++ +C N +H + L+
Sbjct: 192 AMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKH 251
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D+ ++N +I MY K G + DA+ VFD M R + SW+ +I Y N L+ F
Sbjct: 252 GLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFF 311
Query: 367 EQMRKLGLQPNEQTFLAVFS 386
+ M+ G++P+ T +++ S
Sbjct: 312 KGMQLGGIRPDLLTVVSLTS 331
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D+V+ N ++ MY K G M A VFD + + SW+ ++ GY NGL E + + M
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 371 KL-GLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ PN+ T++++ A A+++ IH + +K+ + L+ + GKCG
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVAT--CLIDLYGKCG 475
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L +A + +P T+ W A+ IHG
Sbjct: 476 RLEDAMSLFYE-IP-RDTSVPWNAIIASLGIHG 506
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Query: 279 CFYTLFELCGN----PKWYE------------NAKKVHDYFLQSTIRGDLVLNNKVIEMY 322
C LF +CG P +Y + KKVH + D+ + ++ +Y
Sbjct: 107 CVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLY 166
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFL 382
+ G + A +VF M + + SW+ MI+G+ NG L + +M+ G++ + T
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 383 AVFSACG-SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
++ C S D I IH +K G+ L+ + K G L +AQ +Q
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKH--GLDSDVFVSNALINMYSKFGRLQDAQMVFDQ 282
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F LF C N KK+H L ++VL+ K+I +Y G ++ +R FD++
Sbjct: 25 FNALFNSCVN---VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 340 DRSMDSWHLMINGYADNGLGDEGL----QLFEQMRKLGLQPNEQTFLAVFSACGS 390
+++ SW+ +I+ Y G E + QLF L+P+ TF + AC S
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS 136
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 211/399 (52%), Gaps = 35/399 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G + EA+ L K G++ D+ + K++H + ++ +
Sbjct: 5 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGA 64
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY CGSM A +VFD + + W MIN +G G + + +F++M + G
Sbjct: 65 VVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETG 124
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P+ +FLA+ AC + ++E + + M S++ + P EHY +V +LG+ G EA
Sbjct: 125 VSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEA 184
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS-------------- 479
+FI + +P EP + W AL RIH + +L A + +++L+P
Sbjct: 185 YKFI-KSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAE 243
Query: 480 -------KADPKKIPTPPPKKRTAISILDGKSRLVEF--RNPTLYRDDE----KLKALNQ 526
K K+ +K A S ++ + + F R+ + +RD + KL + +
Sbjct: 244 MGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHS-HRDSQAIHLKLAEITE 302
Query: 527 M--KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+E YV DT +VLHD+ +E K L HSERLAI++GLIST + TPLRI KNLRVCG
Sbjct: 303 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 362
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH K++S++ RE++VRD RFHHF G CSCGD+W
Sbjct: 363 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 401
>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
Length = 948
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 207/396 (52%), Gaps = 36/396 (9%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENA-KKVHDYFLQSTIRGDLVLNNKV 318
G V A + G + + + C + E A +KVH + D + V
Sbjct: 557 GAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAV 616
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG---LGDEGLQLFEQMRKLGLQ 375
+ MY K GS+ +A FD + + + +W M+ Y G D L+L M++ G+
Sbjct: 617 MRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVM 676
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ TF+ + +AC ++EA +F+ MK ++G+ P EHY+ LV + + G+L EA+
Sbjct: 677 PDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAED 736
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD----LDPSKADPKKIPTP-P 490
I + +P + W AL + D E+++ LDP ++
Sbjct: 737 LI-RMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTGAHRVAARWE 795
Query: 491 PKKRTAISILD-------GKSRLVEFRNPT---------------LYRDDEKLKALNQMK 528
KR + D GKS ++ +N +Y + +++ AL +K
Sbjct: 796 EAKRVRKLMTDRGIKKEPGKS-MISIKNTVHGFVAGDRSHPHTREIYAEVDRITAL--IK 852
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+ Y+PDTRYVLHD+ ++ KE+ L YHSERLA+AYG ++TP PLR+IKNLRVCGDCH
Sbjct: 853 KDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDCHT 912
Query: 589 AIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
A K+ ++++ RE+IVRDN+RFHHF KDG CSCGDYW
Sbjct: 913 ASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 265 AIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIE 320
A++L D+ GV D CF T+ + K++H L + D ++ V++
Sbjct: 253 ALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVK 312
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY + GS+ DA R FD + + +W ++I Y G + +Q+ E+M G++PNE T
Sbjct: 313 MYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVT 372
Query: 381 FLAVFSAC 388
F+ + C
Sbjct: 373 FITILDTC 380
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 17/253 (6%)
Query: 222 GHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARL----CQEGKVKEAIELMDK----GV 273
G + + + + C A D++ P VA L C+ G ++++++ GV
Sbjct: 307 GTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGV 366
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFL---QSTIRGDLVLNNKVIEMYGKCGSMTD 330
K + F T+ + C N E+ KK+ Q ++ + VI M+ + SM
Sbjct: 367 KPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR FD ++ +S+ ++ MI GYA+N E L +F++M + + + SAC S
Sbjct: 426 AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+EE +H +M + G+ LV + +CG + +A + P
Sbjct: 486 IPDLEEGKALHCSAM--DLGLHRDDVVRTALVDMYSRCGSMEDASAVFGE--IERPDTIA 541
Query: 450 WEALRNYARIHGD 462
W A+ HGD
Sbjct: 542 WSAMIAALGRHGD 554
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 4/221 (1%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ + V AD C + E K +H + + D V+ +++MY +CG
Sbjct: 463 EMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCG 522
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
SM DA VF + +W MI +G + + +M++ G +P T + V +
Sbjct: 523 SMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLA 582
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A +EEA S+ + G E ++ + K G + EA ++ P
Sbjct: 583 ACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDK--IENPD 640
Query: 447 AEFWEA-LRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ W L Y R+ G + D A +L + P K+
Sbjct: 641 VKAWTTMLEAYCRL-GKYNASDRALKLARMMQQDGVMPDKV 680
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + + +LC + +VHD+ +S + + + N ++ MY G+ +ARR+F
Sbjct: 62 DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF-LAVFSACGSADAI 394
D + ++ S+ ++ Y G DE L++ R + + +AV +A D
Sbjct: 122 DGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLS 181
Query: 395 EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF--WEA 452
F H + + + G + L+G+ CG + A Q ++ P+++ W
Sbjct: 182 LGRFFHDTIRRCGYDLDAGVA--ISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTK 239
Query: 453 LRNYARIH----GDIDLEDHAEE 471
+ H G +DL D E
Sbjct: 240 ILAACNEHRDYIGALDLFDRMRE 262
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 214/392 (54%), Gaps = 29/392 (7%)
Query: 260 GKVKEAIELMDKGVKAD-ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
G V+ +E+ GV+ D A + + + +++H ++ ++++ N +
Sbjct: 220 GAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNAL 279
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KC + AR VF+ + R + SW M+ G A +G +E L L+++M G +PNE
Sbjct: 280 IDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNE 339
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF+ + AC A +++ FESMK+E+GI+P +HY + +L + GHL EA++ +
Sbjct: 340 VTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELM- 398
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPT---------- 488
+P+EP W AL + + D ++ + +++L P + + +
Sbjct: 399 TTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWD 458
Query: 489 PPPKKRTAISILD-----GKSRL---VEFR------NPTLYRDDEKL---KALNQMKEST 531
K R + L+ G S + EFR P R++ + + + +M++
Sbjct: 459 SVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRG 518
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
YVPDT V+HD+++ KE L HSERLA+A+GLI +P + +R++KNLRVC DCH +K
Sbjct: 519 YVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMK 578
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++S I R+++VRD+ RFHHF+ GKCSC ++W
Sbjct: 579 LISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 610
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H +F+ S GD V+ + +++MY KCGS D R+VFD M+ ++ W +++GYA
Sbjct: 124 GRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 183
Query: 356 NGLGDEGLQLFEQM 369
NG +E LQLF M
Sbjct: 184 NGRSEEALQLFRSM 197
>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 204/391 (52%), Gaps = 39/391 (9%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G++ L C K++H + L+ G++V++ +I+MY K G
Sbjct: 482 EMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAG 541
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+T A+RVF + +++ + M+ G A +G E LF M + GL+P+ TF A+ +
Sbjct: 542 SLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLT 601
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC S + EA+ + + M++++G++P EH+ +V +L + G+L EA FIE+ P EP
Sbjct: 602 ACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLDEAMAFIERS-PAEPG 660
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------------------------- 478
A W AL IHG++DL + A + L+P
Sbjct: 661 ASSWGALLTGCAIHGNLDLAESAARHLFKLEPHNSANYLAMMSLYEQHQMFDEAESLKYA 720
Query: 479 -----SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYV 533
A P T + + G S E P +Y DE + ++QM+ YV
Sbjct: 721 MKARGVDARPGWSWTQAGRSIHVFEVDGGSSPHPE--TPEIY--DEMSRLVSQMRMVGYV 776
Query: 534 PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRVCGDCHNAIKI 592
PDT + +D+ +E KE LL H+E+LA+ YGLI S +R P+R++KN R+C DCH IK
Sbjct: 777 PDTGCIAYDVPEEEKELLLLCHTEKLAVVYGLIRSDKSRAPVRVVKNTRMCRDCHEVIKH 836
Query: 593 MSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S + GR++I+RD RFHHF DGKCSC DYW
Sbjct: 837 VSALCGRQIILRDASRFHHFVDGKCSCDDYW 867
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 253 LARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ + G+ +EA+ ++++G+ DA+ +L + N + +VH +FL+ +
Sbjct: 293 LSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGL 352
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D +++MY KCG + A+RVFD + R++ +W+ ++ G+A+ G D L+L E
Sbjct: 353 SPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEA 412
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M++ + PN T+ + + +A + +KS G++P + L+ G C
Sbjct: 413 MKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSA-GVAPNVVSWTSLIS--GSC 468
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 303 FLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA---------DRSMDSWHLMINGY 353
L T +V N VI + G + DA + + MA + ++ +W+ +++G
Sbjct: 237 VLLRTAGAGVVAWNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGC 296
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISP 412
A +G E L + +M + G+ P+ T ++ + ++ ++ +H ++ G+SP
Sbjct: 297 ARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLR--HGLSP 354
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIE 438
LV + KCG L AQ+ +
Sbjct: 355 DAYTGTALVDMYAKCGRLDIAQRVFD 380
>gi|242078125|ref|XP_002443831.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
gi|241940181|gb|EES13326.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
Length = 688
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 212/402 (52%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDKG----VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA G+ +EA+EL + V D F T+ + E+AK+ H +Q +
Sbjct: 288 LAAYVLHGRSEEALELYQEMCRSRVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGL 347
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+V N ++++Y K G M DAR VF+ M R++ SW+ +I GY +G+GD+ +++FE+
Sbjct: 348 PLDIVGNTALVDLYCKWGRMEDARNVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFER 407
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+ G+ PN TFLAV +AC + +++ F+ M + P HY ++ + G+ G
Sbjct: 408 LIAEGVVPNHVTFLAVLNACRFSGLVDKGKRIFQLMTENLRMKPRAMHYACVIELFGREG 467
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI-- 486
L EA I ++ PF PTA W AL +RIH ++ L A E ++ ++P K + +
Sbjct: 468 LLDEAYSMI-RRAPFTPTANMWGALLTASRIHKNMHLAKLAAEQLLAMEPEKINSYAVLL 526
Query: 487 -------------PTPPPKKRTAISILDGKSRLVE-------FRNPTLYRDDEKL----- 521
KR + I + + + F TL+ ++
Sbjct: 527 NLYVSSGRQDDACKVVETLKRKGLYIHNACTWITVKKTDHKFFFKDTLHPQSAEIYRRLH 586
Query: 522 KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+ ++E+ YV + +L DI + ++ + YHSERLAIA+GL+ST +TPLRI ++ R
Sbjct: 587 TLMKDVREAGYVAEENELLPDIYPDEQKVSSAYHSERLAIAFGLMSTAPQTPLRINQSHR 646
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+C DCH IK ++ + RE++VRD RFHHFK G CSCGDYW
Sbjct: 647 LCRDCHKVIKFVAEVTKREIVVRDGSRFHHFKLGICSCGDYW 688
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 297 KKVHDYFLQSTIRGDLV---LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+++H +++ GD+ L +++MY KCG + +ARRVFD + S+ +W+ M+ Y
Sbjct: 232 QQLHCCVVKAGACGDVADRYLACALLDMYSKCGLIDEARRVFDGLPRASVVAWNSMLAAY 291
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTF---LAVFSACGSADAIEEA 397
+G +E L+L+++M + + ++ TF L VFS G + ++A
Sbjct: 292 VLHGRSEEALELYQEMCRSRVAMDQFTFSTMLGVFSRLGLLEHAKQA 338
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL +N V+ Y +CG + +ARR FD M DR+ +W +M+ G D G L LF +M
Sbjct: 139 DLYTHNHVLRTYLECGMLAEARRAFDGMPDRNGVTWGIMMGGLVDRGQPRAALALFREML 198
Query: 371 KL------GLQPNEQTFLAVF---SACGSADAIEEAFIHFESMKSEFGISPGTEHYL--G 419
G P ++ + +A GSA A ++ +H +K+ + YL
Sbjct: 199 LAEEAGGDGDAPPPRSLVVALRAATASGSARAGQQ--LHCCVVKAG-ACGDVADRYLACA 255
Query: 420 LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + EA++ + LP + W ++ +HG
Sbjct: 256 LLDMYSKCGLIDEARRVFD-GLP-RASVVAWNSMLAAYVLHG 295
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 212/408 (51%), Gaps = 38/408 (9%)
Query: 253 LARLCQEGKVKEAIEL---MD-KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q+G KE+I++ MD +G+ D + F ++ C E K++H ++ +
Sbjct: 315 IATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVL 374
Query: 309 RGDLVLNNKVIE-----MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
L N V+E MYGKCG++ A+ VF M ++ SW+ M+ A G GDE
Sbjct: 375 GRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAA 434
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGV 423
G++ + +F++V AC + +E A+ HF+ M S+F + P E+Y +V +
Sbjct: 435 AFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDL 494
Query: 424 LGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
L + G L +A + + +PF P A W L R+ G ++ A E +L+P P
Sbjct: 495 LARSGRLGDADELM-NSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAP 553
Query: 484 ----KKIPTPPPKKRTAI------------------SILDGKSRLVEF-----RNPTLYR 516
+ + KK + S+++ R+ EF +P + +
Sbjct: 554 YTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDK 613
Query: 517 DDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
+L LN ++K++ +VP T V+HD+ E KE+ L HSE+LA+A+GLIST + PL
Sbjct: 614 ILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLL 673
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
++KNLRVC DCH AIK++S++ R + VRD RFH F+ G CSCGDYW
Sbjct: 674 VLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENA-KKVHDYFLQSTIRGDLVLNNKV 318
+A++L +K GV+ + F + C + E ++ + LQ +R D+ + N +
Sbjct: 225 QALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEKIHARIVETGLQFDVR-DVGVQNAL 283
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+ MY KCGS+ AR +F M R S ++MI +A GLG E +Q+F +M GL ++
Sbjct: 284 LNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDD 343
Query: 379 QTFLAVFSACGSADAIEEA-FIHFESMKSEFG---ISPGTEHYLGLVGVLGKCGHLFEAQ 434
TF +V +AC A+E IH ++ G P LV + GKCG L +A+
Sbjct: 344 TTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAK 403
Query: 435 QFIE 438
+
Sbjct: 404 AVFK 407
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 277 ASCFYTLFELCGNPKWYENAKKVHDYFLQST-IRGDLVLNNKVIEMYGKCGSMTDARRVF 335
A F T C + + +++H S IR ++L+ + MY KCG ++ A+ VF
Sbjct: 139 AMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVF 198
Query: 336 DHMADRSMDSWHLMINGYADNGLG-DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
D + +++ SW+ +I YA +G + L LFE+M + G++P TF+ V AC ++
Sbjct: 199 DRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSL 258
Query: 395 EEAFIHFESMKSEFGI-SPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
E+ +F + G ++ L+ + KCG L A+ +
Sbjct: 259 EKIHARIVETGLQFDVRDVGVQN--ALLNMYAKCGSLEVARDIFRK 302
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++ + LNN ++ M K GS+ +AR +FD + +++ SW+++I+ YA G
Sbjct: 63 IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
L LF +M + P TF SAC S ++ +K+ GI P
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
+ + KCG L A+ + ++P + W AL
Sbjct: 180 AIFSMYAKCGDLSTAKSVFD-RIPAKNVVS-WNAL 212
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 206/408 (50%), Gaps = 43/408 (10%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
QEG+V EA+EL + G +ADA ++ + + E ++VH Y ++S D+
Sbjct: 507 QEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVS 566
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
N +++MY KCG +A R+F + R++ SW MING +GLG E + +FE+MR G
Sbjct: 567 AGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGG 626
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+E T+LA+ SAC A ++E +F ++ + + P EHY +V +LG+ G L EA
Sbjct: 627 VEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREA 686
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK----ADPKKIPTP 489
+ I + +P EPT W+ L + R+H D+ + A ++++ +D +
Sbjct: 687 RDLI-RTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAE 745
Query: 490 PPKKRTAISILD----------GKSRLVEFRNPTLY----RDDEKLKALNQMKESTYVPD 535
R + D G VE + D+E ++ +
Sbjct: 746 AGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVE 805
Query: 536 TR-------------YVLHDIDQEAKEQALLYHSERLAIAYGLISTPA-------RTPLR 575
TR + LHD+D+E++ ++L HSERLA+ L+ R P+R
Sbjct: 806 TRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIR 865
Query: 576 IIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ KNLRVCGDCH K +S +V R L+VRD RFH F+ G CSC DYW
Sbjct: 866 VYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA-DRSMDSWHLMINGYADNG 357
+H +++ V+ + ++ +Y K G + DARRVFD R + +W+ MI+GYA G
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAG 400
Query: 358 LGDEGLQLFEQMRKLGL------QPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGI 410
G + L +F +MR+ QP+E TF ++ ACG A E A +H S F
Sbjct: 401 HGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFST 460
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ LV + KCG L A Q E+
Sbjct: 461 ASNAILAGALVDMYVKCGRLPVAMQVFER 489
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + D +L N +I+MY KCG + A VF M DR++ SW ++ G+ +G
Sbjct: 238 QLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHG 297
Query: 358 LGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
L+L +MR PNE T A AC + + IH +++ + E
Sbjct: 298 DATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGY-----EE 352
Query: 416 HYL---GLVGVLGKCGHLFEAQQFIE 438
HY+ LV + K G + +A++ +
Sbjct: 353 HYVVASSLVLLYSKGGRIGDARRVFD 378
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQS--TIRGDLVLNNKVIEMYGKCGSMTDARR 333
D F +L + CG +VH S + + +L +++MY KCG + A +
Sbjct: 426 DEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQ 485
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF+ + ++ W ++ G+A G E L+LF + + G + + ++
Sbjct: 486 VFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFAL 545
Query: 394 IEEAF-IHFESMKSEFG--ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
+E+ +H +KS G +S G +V + KCG EA++ +++P W
Sbjct: 546 VEQGRQVHCYGVKSPAGTDVSAGNS----IVDMYLKCGLPDEAERMF-REIPARNVVS-W 599
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ N HG L A + ++ +P ++
Sbjct: 600 TTMINGLGKHG---LGREAVAMFEEMRAGGVEPDEV 632
>gi|326532424|dbj|BAK05141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 205/403 (50%), Gaps = 36/403 (8%)
Query: 254 ARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR 309
R Q G A + K V+ D + +L C + ++ K H + +
Sbjct: 14 VRYVQNGMADAAFLVFRKMQVCNVEPDVATMVSLIPACAHLAALQHGKCSHGSVIVRGMA 73
Query: 310 GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+ + N +I+MY KCG + +R++FD M R + SW+ MI GY +GLG E LF M
Sbjct: 74 PETSICNALIDMYAKCGRIAFSRQIFDAMPSRDIVSWNTMIAGYGIHGLGKEATALFLDM 133
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+ +P+ TF+ + SAC + + E F M ++GI+P EHY+ +V +L + G
Sbjct: 134 KNHACEPDGVTFICLISACSHSGLVTEGKHWFHMMAQKYGITPRMEHYISMVDLLARGGF 193
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS---------- 479
L EA QFI Q +P + W AL R+H +IDL ++ L P
Sbjct: 194 LDEAYQFI-QSMPMKADVRVWGALLAACRVHKNIDLGKQVARVIQKLGPEGTGNFVLLSN 252
Query: 480 ----------KADPKKIPTPPP-KKRTAISILDGKSRLVEF--------RNPTLYRDDEK 520
A+ + I KK S ++ L F R+P +Y++
Sbjct: 253 IFSAAGRFDEAAEVRIIQKEKGFKKSPGCSWIEINGSLHAFIGGDRSHPRSPEIYQELHN 312
Query: 521 LKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNL 580
+ L + + Y DT +VL D+++E KE+ALLYHSE+LAIA+G+++ + + KNL
Sbjct: 313 I--LVDINKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGILTLSEDKDIFVTKNL 370
Query: 581 RVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
RVCGDCH IK MS + R++IVRD RFHHFK+G+CSCGD+W
Sbjct: 371 RVCGDCHTVIKYMSLVRRRDIIVRDANRFHHFKNGQCSCGDFW 413
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 214/400 (53%), Gaps = 37/400 (9%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +EA+ ++ +GV + F + GN AK V ++ G++
Sbjct: 182 QLGLNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAAKLVQACLSETGFLGNVE 241
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N ++ GKCGS+ + + F M ++ SW+ I A +G G G++LF+ M+ G
Sbjct: 242 VANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQTMQLEG 301
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ T + V S+C A + + + +F +M ++G+ EHY ++ +L + G L A
Sbjct: 302 IDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGLPAEAEHYSCVIDLLSRAGWLEHA 361
Query: 434 QQFIEQKLPFEPTAEF-WEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
++F+ ++LPF + F W L ++HGD++ A + ++ L+P P
Sbjct: 362 EEFV-KRLPFGDESVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYA 420
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEFR--------NPTLYRDDEKLKA 523
K + PKK +S ++ K R+ EFR + ++R+ E+L
Sbjct: 421 GAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLN- 479
Query: 524 LNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVC 583
++MK + +V DT+ V++D+ + KE L HSE+LAIA+GLIST A PLRI+KNLRVC
Sbjct: 480 -DKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVC 538
Query: 584 GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH+A K +S +VGRE++VRD RFHHF+ G CSC D+W
Sbjct: 539 SDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 578
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 264 EAIEL-----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
EA+EL +D + +C L C + + + ++H + + D V+ +
Sbjct: 86 EALELCRQMRLDGVTPSKGTCVAAL-NACCHSRDFSEGLRIHAFARELGGDADTVVQTAL 144
Query: 319 IE-MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
+ MY + GS+ DAR +FD M R++ SW M+ ++ GL E L++F + G+ PN
Sbjct: 145 VNIMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPN 204
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
+ TF AV +A G+ +I A + ++ SE G E GL+ LGKCG L E +F
Sbjct: 205 DVTFTAVLNASGNLASIRAAKL-VQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKF 262
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
+ + CG+P W + + S + D+++ V+ YGKCG + AR +FD +
Sbjct: 7 YVAILGACGHP-WEVDTIRARVEACGS-LELDVIVATAVMNAYGKCGDLDSARGLFDRIL 64
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFI 399
R W+ MI+ + GDE L+L QMR G+ P++ T +A +AC + E +
Sbjct: 65 VRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHSRDFSEG-L 123
Query: 400 HFESMKSEFGISPGTEHYLGLVGVL-GKCGHLFEAQQFIE 438
+ E G T LV ++ + G L +A++ +
Sbjct: 124 RIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFD 163
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 195/364 (53%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C E + VHDY ++ + LNN +I+M+ KCG + A+R+FD M+ + + SW
Sbjct: 292 CAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISW 351
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ M+NG+A +GLG E L F M+ LQP+E TF+ V +AC A ++E F +++
Sbjct: 352 NSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA 411
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+G+ +EHY +V +L + G L EA++FI + +P +P W ++ R++ +++L
Sbjct: 412 LYGVRLKSEHYGCMVDLLCRAGLLAEAREFI-RVMPLQPDGAIWGSMLGACRVYNNLELG 470
Query: 467 DHAEELMVDLDPSK--------------------------ADPKKIPTPPPKKRTAISIL 500
+ A ++ L+P+ + K I P I +
Sbjct: 471 EEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNI 530
Query: 501 DGKSRLVEFRNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ +P + L+ + + +K + YV DT VL +ID KE+++ HSE+L
Sbjct: 531 AHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKL 590
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+ YGL+ + + I+KNLRVC DCH IK++S+I R++ +RD RFHHFKDG CSC
Sbjct: 591 ALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSC 650
Query: 620 GDYW 623
DYW
Sbjct: 651 RDYW 654
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ G D TL C K K+H + + ++ VL + ++ MY KCG +
Sbjct: 173 EDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLK 232
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSAC 388
AR+VFD ++D+ + +W +I GY N E LQLF ++ ++PNE T LAV SAC
Sbjct: 233 TARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISAC 292
Query: 389 GSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+E ++H +++ G S + L+ + KCG + +A + I + ++
Sbjct: 293 AQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGDI-DAAKRIFDSMSYKDLI 349
Query: 448 EFWEALRNYARIHG 461
W ++ N +HG
Sbjct: 350 S-WNSMVNGFALHG 362
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F +L + C ++ K +H ++ + DL + ++ MY CG + AR +F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ M R+ W MI+GY N +E L L+++M + G P+E T + SAC +
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197
Query: 396 EAF---IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
H M + G+ LV + KCG L A+Q ++ + A W A
Sbjct: 198 VGMKLHSHIREMDMKICAVLGS----ALVNMYAKCGDLKTARQVFDKLSDKDVYA--WSA 251
Query: 453 L 453
L
Sbjct: 252 L 252
>gi|115482642|ref|NP_001064914.1| Os10g0488900 [Oryza sativa Japonica Group]
gi|113639523|dbj|BAF26828.1| Os10g0488900, partial [Oryza sativa Japonica Group]
Length = 366
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 201/364 (55%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C E ++H +++ + D + + +++MYGKCG ++ + ++F+ + R+ +W
Sbjct: 4 CAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAW 63
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ +IN +A +G G E +Q F++M G++PN F+++ +AC A ++E +F SMK
Sbjct: 64 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKE 123
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
GI P EHY ++ G+ G L EA +FI + +P +P A W +L R+ G +L
Sbjct: 124 AHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISE-MPIKPNAYGWCSLLGACRMRGSKELG 182
Query: 467 DHAEELMVDLDPS---------------------KADPKKIPTPPPKKRTAISILDGKSR 505
+ A + ++ L+P KA K + KK S +D +
Sbjct: 183 EVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKK 242
Query: 506 LVEF-----RNPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
F +P EKL+ L ++KE Y+PDT ++ +++ AKE+ L YHSER+
Sbjct: 243 THVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERI 302
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+A+ LIS PA P+ + KNLR+C DCH A K + ++ R++IVRDN RFHHF +G+CSC
Sbjct: 303 AVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSC 362
Query: 620 GDYW 623
GDYW
Sbjct: 363 GDYW 366
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 216/416 (51%), Gaps = 38/416 (9%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKW-YENAK 297
D+ + A LA Q G+ + AI EL G+K + F ++ +C K
Sbjct: 60 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 119
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+ H + ++S + L +++ ++ MY K G++ A VF ++ + SW+ MI+GYA +G
Sbjct: 120 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 179
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
+ L +F++M+K ++ + TF+ VF+AC A +EE +F+ M + I+P EH
Sbjct: 180 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 239
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V + + G L +A + IE +P + W + R+H +L A E ++ +
Sbjct: 240 SCMVDLYSRAGQLEKAMKVIEN-MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 298
Query: 478 PS--------------------KADPKKIPTPP-PKKRTAISILDGKSRLVEFR------ 510
P +A +K+ KK S ++ K++ F
Sbjct: 299 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 358
Query: 511 --NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+Y E L ++K+ Y PDT YVL DID E KE L HSERLAIA+GLI+T
Sbjct: 359 PLKDQIYMKLEDLS--TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 416
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
P +PL IIKNLRVCGDCH IK++++I RE++VRD+ RFHHF DG CSCGD+W
Sbjct: 417 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 54/96 (56%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH +++ + +++ Y K G + +A +VF + D+ + +W M+ GYA G
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ +++F ++ K G++PNE TF ++ + C + +A
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 113
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 211/394 (53%), Gaps = 33/394 (8%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYEN---AKKVHDYFLQSTIRGDLVLNN 316
G V +E+ GV+ D + + L + G +++H + + +++ N
Sbjct: 126 GAVGLFVEMRRDGVRIDDA--FVLATVVGGAAELAALVLGRQLHGFAITLGFLSSMIVGN 183
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
+++MY KC + AR VF + R + SW ++ G A +G +E L L+++M G++P
Sbjct: 184 ALVDMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKP 243
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
NE TF+ + AC A +++ F+SMK E+GI PG +HY + +L + G+L EA++
Sbjct: 244 NEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEEL 303
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------------ 478
I +P+EP W AL + + H D + + +++L P
Sbjct: 304 I-TTMPYEPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCK 362
Query: 479 --SKADPKKIPTP-PPKKRTAISILDG--KSRLVEFRNPTLYRDDEKLKAL----NQMKE 529
S A +KI +K S ++ +SR+ L +E + L ++M++
Sbjct: 363 WDSVAKVRKIMAEMEIRKEPGYSWIEAGRESRMFHAGEVPLDIGEEITRFLEELVSEMRK 422
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
YVPDT V+HD+++ KEQ L HSERLA+A+G++ +P + +R++KNLRVCGDCH
Sbjct: 423 RGYVPDTSSVMHDLEENEKEQHLFLHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTV 482
Query: 590 IKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+K +S I R++IVRD RFHHF+DG CSC ++W
Sbjct: 483 MKFISEIAQRKIIVRDASRFHHFEDGNCSCSEFW 516
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+++H +F+ S D V+ + +I+MY KCG DAR+VFD + ++ W +++GYA
Sbjct: 30 GRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYAS 89
Query: 356 NGLGDEGLQLFEQMRKLGL 374
NG E + LF M + GL
Sbjct: 90 NGCTGEAIDLFRSMPERGL 108
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 204/393 (51%), Gaps = 33/393 (8%)
Query: 261 KVKEAIELMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
K E LM+K V+ D+ T+ CG + K++H+ + + +L+L N ++
Sbjct: 276 KAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALM 335
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY CG + DAR +FD M+ R + SW +I+ Y +G G E + LFE+M GL+P+
Sbjct: 336 DMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSI 395
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+AV +AC A + + +F+SM S + I P EHY +V +LG+ G + EA FI
Sbjct: 396 AFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITT 455
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------AD 482
L EP W AL RIH ++D+ A + + L P + AD
Sbjct: 456 ML-IEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWAD 514
Query: 483 PKKIPTPPP----KKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKES 530
+ + KK SI++ ++ F ++ +Y ++L L +++
Sbjct: 515 VTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDEL--LGKIRGM 572
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAI 590
Y P+ LHD+++E KE L HSE+LAIA+ L++T T +R+ NLR C DCH A
Sbjct: 573 GYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAA 632
Query: 591 KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I RE++++D R HH G CSCGDYW
Sbjct: 633 KLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C K ++H + + ++ + + I MY +CG DA RVFD M R + SW
Sbjct: 133 CSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSW 192
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFSACGSADAIEEAFIH--FES 403
+ MI G+A GL D +++F+Q L G P+ T + A G+A + F+ F++
Sbjct: 193 NAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDN 252
Query: 404 MKSEFGIS 411
M+ + IS
Sbjct: 253 MQFKELIS 260
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
RRVFD+M + + SW+ M+ YA+N + ++LF M K ++P+ T V CG
Sbjct: 246 VRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGE 305
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
A E +K + + P L+ + CG L +A++ +
Sbjct: 306 LSAFSVGKRIHEIIKRK-NMCPNLLLENALMDMYASCGCLKDAREIFD 352
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 189/338 (55%), Gaps = 28/338 (8%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
VL +I+ Y KCGS+ A+ VF M + ++ +I+G A G +F QM K+
Sbjct: 340 VLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKV 399
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+QP+ TF+ + C A +++ +F M S F ++P EHY +V + + G L E
Sbjct: 400 GMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVE 459
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
AQ I + +P E + W AL R+H D L +H + +++L+P +
Sbjct: 460 AQDLI-RSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYS 518
Query: 482 ------DPKKIPTPPPKKRT----AISILDGKSRLVEF-----RNPTLYRDDEKLKAL-N 525
+ +KI + +K S ++ + EF +P ++ EKL++L
Sbjct: 519 ASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFK 578
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++E+ Y P T +VL D+++E KE L HSE+LA+A+ LIST A+ +R++KNLRVCGD
Sbjct: 579 DLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGD 638
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH AIK++S++ GRE+IVRDN RFHHF +G CSC DYW
Sbjct: 639 CHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L++ G++ D+ + C + + + Y +S G++ + +++MY KCGS
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M +ARRVFD M ++ + W +I GYA NG+ E L +F +M++ ++P+ + VFSA
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313
Query: 388 CGSADAIE 395
C A+E
Sbjct: 314 CSRLGALE 321
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 290 PKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLM 349
P ++ +H +++ D+ + ++ +Y K G +TDAR+VFD + ++++ SW +
Sbjct: 115 PHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAI 174
Query: 350 INGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFG 409
I GY ++G E L LF + ++GL+P+ T + + AC + + E G
Sbjct: 175 ICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASG-RWIDGYMRESG 233
Query: 410 ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
LV + KCG + EA++ + + E W AL
Sbjct: 234 SVGNVFVATSLVDMYAKCGSMEEARRVFDGMV--EKDVVCWSAL 275
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 206/397 (51%), Gaps = 32/397 (8%)
Query: 258 QEGKVKEAIEL--MDKGVKA--DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G + A+E M +GV+ D F + C + ++VH +++ + +
Sbjct: 252 QNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVP 311
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++ MY +CG + D+ RV+D + MI+ +G G + ++LF+QM G
Sbjct: 312 VITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGG 371
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PNE TFLA+ AC + +E FE M +G P +HY +V +LG+ G L EA
Sbjct: 372 AEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEA 431
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
+ I +P W+ L + + + D+ + E +++ DP + P
Sbjct: 432 EALI-LSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRAT 490
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK-ALNQ 526
K + +K +S ++ K ++ +F +P DE LK + +
Sbjct: 491 SKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGK 550
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+++ Y PD V HD++ E KE +L +HSE+LAIA+ ++ P P+R++KNLRVC DC
Sbjct: 551 IRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDC 610
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H AIK++S++ GRE++VRD RFHHF+DG+CSCGDYW
Sbjct: 611 HVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+G+ D ++F C + ++VH Y ++S + D+ + N + MY +CG + +
Sbjct: 168 EGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAE 227
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
V + ++ S++ I G NG + L+ F MR + + P+ TF++ S C
Sbjct: 228 GEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSD 287
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
A+ + +H + +K+ G+ LV + +CG L ++++
Sbjct: 288 LAALAQGQQVHAQVIKA--GVDKVVPVITSLVHMYSRCGCLGDSER 331
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 49/236 (20%)
Query: 252 DLARLCQEGKVKEAIELMDKGVK-ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG 310
+ RLC G++K+A+ +GV +DAS F +F C + +++H + S
Sbjct: 19 EFIRLCSSGRLKDALHHPFRGVLWSDASLFSHIFRAC---RAIPLLRQLHAFAATSGAAA 75
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN-------------- 356
D N ++ Y G + AR +F+ ++ R++ SW+++I G N
Sbjct: 76 DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMP 135
Query: 357 -----------------GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC-GSADAIE--- 395
GL ++ LQ F MR+ G+ P+E +VF C G D +
Sbjct: 136 TRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQ 195
Query: 396 -EAFIHFESMKSEFGISPGTEH-YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A++ M S+ + H Y+ +CG L E + + + LP F
Sbjct: 196 VHAYVVRSGMDSDMCVGNSLAHMYM-------RCGCLAEGEAVL-RALPSLTIVSF 243
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 209/398 (52%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q GK ++A+ E++ + + D ++ C + + VH + DL+
Sbjct: 299 QNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLL 358
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+++ +++MY KCG DA +F M R++ SW+ MI GYA NG E L L+E M +
Sbjct: 359 VSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEEN 418
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
L+P+ TF+ V SAC A +EE +F SM + G+ P +HY +V + G+ GH+ +A
Sbjct: 419 LKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKA 478
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP---------- 483
I + EP + W + + + GDI + A +++L+P A P
Sbjct: 479 VDLISS-MSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAA 537
Query: 484 -----------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKL------KALNQ 526
+ + KK +A S ++ + + +F D K+ + + +
Sbjct: 538 RGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRK 597
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP-ARTPLRIIKNLRVCGD 585
++E+ + P+T VLHD ++ K +++ YHSE+LA+AYGLI P TP+RIIKN+R C D
Sbjct: 598 LQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCAD 657
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH +K +S I R +I+RD+ RFHHF +GKCSC DYW
Sbjct: 658 CHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ + +G+K ++ C K++H + + G++ + N + ++Y +C
Sbjct: 144 LRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARC 203
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + ARR+FD M R++ +W+LMI+GY N ++ + LF +M+ L+P++ T +V
Sbjct: 204 GEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVL 263
Query: 386 SACGSADAIEEA 397
A A I+EA
Sbjct: 264 GAYIQAGYIDEA 275
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ +Y K G + D R +FD+M R S++ +I+G+A NG G L +F +M+K GL+
Sbjct: 93 NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152
Query: 376 PNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
P E T ++V +AC D IH + G + + L + +CG + +A+
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCN--ALTDLYARCGEIDQAR 210
Query: 435 QFIEQKLPFEPTAEFWEALRNYARIHGDID--LEDHAEELMVDLDPSKADPKKIPTPPPK 492
+ ++ + +RN + I L++ E +DL ++ P
Sbjct: 211 RLFDRMV-----------IRNVVTWNLMISGYLKNRQPEKCIDL----FHEMQVSNLKPD 255
Query: 493 KRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQAL 552
+ TA S+L + DE K +++E V T ++ +E AL
Sbjct: 256 QVTASSVLGAYIQAGYI--------DEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDAL 307
Query: 553 LYHSERL 559
L SE L
Sbjct: 308 LLFSEML 314
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 241 AGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVH 300
G+ + ++ DL C G++ +A L D+ V + + + + E +
Sbjct: 187 GGNVFVCNALTDLYARC--GEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLF 244
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
S ++ D V + V+ Y + G + +AR+VF + ++ W +MI G A NG +
Sbjct: 245 HEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEE 304
Query: 361 EGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG 419
+ L LF +M +P+ T +V S+C ++ +H ++ G++
Sbjct: 305 DALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFL--MGVNDDLLVSSA 362
Query: 420 LVGVLGKCG 428
LV + KCG
Sbjct: 363 LVDMYCKCG 371
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 216/416 (51%), Gaps = 38/416 (9%)
Query: 243 DQVLPPSVADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKW-YENAK 297
D+ + A LA Q G+ + AI EL G+K + F ++ +C K
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+ H + ++S + L +++ ++ MY K G++ A VF ++ + SW+ MI+GYA +G
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
+ L +F++M+K ++ + TF+ VF+AC A +EE +F+ M + I+P EH
Sbjct: 576 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 635
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V + + G L +A + IE +P + W + R+H +L A E ++ +
Sbjct: 636 SCMVDLYSRAGQLEKAMKVIEN-MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 694
Query: 478 PS--------------------KADPKKIPTPP-PKKRTAISILDGKSRLVEFR------ 510
P +A +K+ KK S ++ K++ F
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Query: 511 --NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+Y E L ++K+ Y PDT YVL DID E KE L HSERLAIA+GLI+T
Sbjct: 755 PLKDQIYMKLEDLS--TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 812
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
P +PL IIKNLRVCGDCH IK++++I RE++VRD+ RFHHF DG CSCGD+W
Sbjct: 813 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 222 GHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELM----DKGVKADA 277
G ++L N N ++ P D+ ++ L ++G+ +EA L G++ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDR--ESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC 93
Query: 278 SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH 337
S F ++ ++ +++H ++ D+ + +++ Y K + D R+VFD
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M +R++ +W +I+GYA N + DE L LF +M+ G QPN TF A
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH +++ + + ++N +I +Y KCG++ AR +FD +S+ +W+ MI+GYA NG
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
L E L +F MR ++ +E +F +V C
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ S F ++ +LC N K +++H ++ D + ++ Y KC +M DA
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 333 RVFDHMA-DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
R+F + ++ SW MI+G+ N +E + LF +M++ G++PNE T+ + +A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 54/96 (56%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH +++ + +++ Y K G + +A +VF + D+ + +W M+ GYA G
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ +++F ++ K G++PNE TF ++ + C + +A
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
Length = 866
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 206/377 (54%), Gaps = 43/377 (11%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
L C + K++H + L+ D+V+ +I+MY K G++ A+R+F+ + +
Sbjct: 498 VLLRACAGLALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLASAQRIFERIQEN 557
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
++ S + M+ G A +G G E + LF M GL+P+ TF A+ +AC S D + E + +F
Sbjct: 558 NLVSSNAMLTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGWEYF 617
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
++M+S +G++P E+Y +V +L +CG+L EA FI K PF+ + W AL +HG
Sbjct: 618 DTMESRYGVTPTVENYACMVDLLARCGYLDEAMDFI-NKSPFKSVSSLWGALLTGCTLHG 676
Query: 462 DIDLEDHAEELMVDLDP----------SKADPKKIPTPPPKKRTAISILDGKSRLVEFR- 510
++ L + A + L+P S + +++ + A+ K+R ++ R
Sbjct: 677 NLALAEAAARKLFKLEPYNSANYLQMVSLYEHEQMFDEAESLKYAM-----KARALDTRP 731
Query: 511 -----------------------NPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEA 547
+Y +E ++ + Q+++S YVPDT +++++ +E
Sbjct: 732 GWSWIQIEQSIHVFEVEGKPHPDTAEIY--EELIRLVFQIRKSGYVPDTSCIVYNVPEEE 789
Query: 548 KEQALLYHSERLAIAYGLI-STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN 606
KE+ LL H+E+LAI YGLI S +R P+R+IKN R+C DCH K +S + R++I+RD
Sbjct: 790 KEKLLLSHTEKLAITYGLIHSDASRVPIRVIKNTRMCNDCHELAKHISALCARQIILRDA 849
Query: 607 KRFHHFKDGKCSCGDYW 623
RFH+F DGKCSC + W
Sbjct: 850 DRFHYFTDGKCSCNNCW 866
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 241 AGDQVLPPSVAD----LARLCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKW 292
+G L PS+A L+ + G+ +EA ++D+G++ D+S +L + +
Sbjct: 278 SGRLELEPSLATWNAVLSGCARNGRDREAFGVVRIMLDQGLQPDSSSMSSLLKSVASLGL 337
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+ + H +FL++ + D+ ++MY KCG + A++VFD + R++ +W+ ++ G
Sbjct: 338 LAHGMEAHGFFLRNQLEPDVYTGTAFVDMYAKCGHLEYAQKVFDTLELRNITTWNSLVAG 397
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP 412
YA+ G D L L E+M++ L P+ T+ + + +A + +K+ G++P
Sbjct: 398 YANAGQFDHALDLVEEMKRNRLDPDVTTWNGLINGYSVNGKSSQAVLLLRQIKA-IGLTP 456
Query: 413 GTEHYLGLVGVLGKC 427
+ L+ G C
Sbjct: 457 NVVSWTSLIS--GSC 469
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 10/196 (5%)
Query: 250 VADLARLCQEGKVKEAI-ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST- 307
VA LA + G A E+ +GV D CG + VH + ++
Sbjct: 155 VAMLAEAEEWGDAIAAFGEMRARGVAPDGYACARALHACGRAGAPREGQAVHAHAAKAGH 214
Query: 308 IRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFE 367
+ ++ + MY + + ARRV + D +W++++ A GL D+ L L E
Sbjct: 215 VAAHPLVPGFLAGMYAESADVGAARRVLE-TEDAPPVAWNVVVACCARLGLVDDALDLAE 273
Query: 368 QMRKLG---LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISP---GTEHYLGLV 421
+M + G L+P+ T+ AV S C EAF M + G+ P L V
Sbjct: 274 RMARSGRLELEPSLATWNAVLSGCARNGRDREAFGVVRIMLDQ-GLQPDSSSMSSLLKSV 332
Query: 422 GVLGKCGHLFEAQQFI 437
LG H EA F
Sbjct: 333 ASLGLLAHGMEAHGFF 348
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 187/346 (54%), Gaps = 44/346 (12%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
L++ +I MY KC + A VF+++ A ++D+W+ M+ G+ NG ++ L+LF +M
Sbjct: 226 LSSALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALELFARMEIT 285
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL PN+ TF V +AC +EE FE M +GI P HY +V + + G LF+
Sbjct: 286 GLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAG-LFD 344
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPK 492
+ + Q +P +P A W+AL + H + +L A ++++ P+ + +
Sbjct: 345 KAEKMIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPNDHAGYVLLSN--- 401
Query: 493 KRTAISILDGKSRLV-EFRNPTLYRDDEKL------------------------------ 521
I LDG V + R L R +K+
Sbjct: 402 ----IYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYE 457
Query: 522 ---KALNQMKESTYVPDTRYVLHDIDQE-AKEQALLYHSERLAIAYGLISTPARTPLRII 577
+ Q+K + YVPDT +VL DID E KE +L HSE+LAIA+GLIST TP+RI
Sbjct: 458 MLSEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRIA 517
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLRVCGDCHNA+K++S+I GR +IVRD RFHHF++G CSCGD+W
Sbjct: 518 KNLRVCGDCHNAVKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 87/233 (37%), Gaps = 23/233 (9%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L+ G D + C + + A ++H + + + N +I Y CGS
Sbjct: 69 LLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRRVCNGLIHAYAVCGS 128
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ-TFLAVFS 386
+ DAR+VFD + +W+ ++ GYA G + + F +G+Q + ++ + +
Sbjct: 129 LLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFF-----VGMQARDTVSWNTIIA 183
Query: 387 ACGSADAIEEAFIHFESMKSEF-------------GISPGTEHYLGLVGVLGKCGHLFEA 433
C EEA F M + GI L+ + KC E
Sbjct: 184 WCVENGEYEEAIAVFREMLASMECLPDRVTLFPGKGIEVEERLSSALINMYSKCA-CIEG 242
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKI 486
+ + L + + W A+ +G + A EL ++ + P KI
Sbjct: 243 AVHVFENLGAQMNVDTWNAMLAGFTANG---CSEKALELFARMEITGLVPNKI 292
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 194/376 (51%), Gaps = 68/376 (18%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++NN +++MY K G A VF+ M D+ + SW ++ G NG +E L+LF +MR +
Sbjct: 347 LVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 406
Query: 373 GLQPNEQTFLAVFSA-----------CGSADAIEEAFI---------------------- 399
G+ P++ AV SA CG + + F
Sbjct: 407 GIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGR 466
Query: 400 ---HFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNY 456
+F+SM+ +GI PG EHY ++ +LG+ G L EA++ + Q + +P A W+AL
Sbjct: 467 GRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQ-MAVQPDATVWKALLAA 525
Query: 457 ARIHGDIDLEDHAEELMVDLDPSKADP---------------------KKIPTPPPKKRT 495
R+HG+++L + A + +L+P A P + + K
Sbjct: 526 CRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEP 585
Query: 496 AISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEA 547
S ++ S++ F R +Y +++ L +KE+ YVPD + LHD+D+E
Sbjct: 586 GCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMIL--IKEAGYVPDMNFALHDMDEEG 643
Query: 548 KEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNK 607
KE L YHSE+LA+A+GL++ P P+RI KNLR+CGDCH A+K +S + R +I+RD+
Sbjct: 644 KELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 703
Query: 608 RFHHFKDGKCSCGDYW 623
FHHF++G CSC DYW
Sbjct: 704 CFHHFREGACSCSDYW 719
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 257 CQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
C+ G EA+EL +G + + + ++ +C E K++H + +++ +
Sbjct: 114 CRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNA 173
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMAD-RSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ +++MY KC + +A +F+ D R+ W M+ GY+ NG G + ++ F MR
Sbjct: 174 FVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRG 233
Query: 372 LGLQPNEQTFLAVFSACGSADAIE-EAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCG 428
G++ N+ TF ++ +ACGS A A +H ++S FG + ++G LV + KCG
Sbjct: 234 EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANV----FVGSALVDMYSKCG 289
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEAL 453
L A++ +E +P + W ++
Sbjct: 290 DLSNARRMLETMEVDDPVS--WNSM 312
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 258 QEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G +AIE + +G++ + F ++ CG+ +VH ++S ++
Sbjct: 217 QNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVF 276
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ + +++MY KCG +++ARR+ + M SW+ MI G GLG+E L LF M
Sbjct: 277 VGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRH 336
Query: 374 LQPNEQTF 381
++ +E T+
Sbjct: 337 MKIDEFTY 344
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I Y G + +AR++F RS +W +I+GY G E L+LF +M+ G +
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PN+ T+ +V C +E+ IH ++K++F + GLV + KC + EA+
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV--VTGLVDMYAKCKCILEAE 193
Query: 435 QFIEQKLPFEPTAEFWEAL 453
E P + W A+
Sbjct: 194 YLFELA-PDKRNHVLWTAM 211
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 210/396 (53%), Gaps = 34/396 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +A+EL + G D ++ C V Y ++ ++V+
Sbjct: 308 GDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVG 367
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I MY CGS+ A RVFD M ++++ + +M+ G+ +G G E + +F +M G+
Sbjct: 368 TALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVT 427
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+E F AV SAC + ++E F M ++ + P HY LV +LG+ G+L EA
Sbjct: 428 PDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYA 487
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
IE + +P + W AL + R+H ++ L + + + +L+P
Sbjct: 488 VIEN-MKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAER 546
Query: 482 ---DPKKIPTPPPKKRT----AISILDGKSRLVE--FRNPTLYR--DD--EKLKALN-QM 527
D + + K+R + S ++ +++V F T + DD KLK LN Q+
Sbjct: 547 RWEDVENVRALVAKRRLRKPPSYSFVE-LNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQL 605
Query: 528 KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 587
K++ Y PDT VL+D+++E KE+ L HSERLA+A+ LI+T T +RI KNLRVCGDCH
Sbjct: 606 KKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCH 665
Query: 588 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IK++S++ RE+I+RD RFHHF+DG CSCG YW
Sbjct: 666 TVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++++ G K D + + + CG+ E +KVH + + D+ + N ++ MY K
Sbjct: 113 LKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKF 172
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + AR VFD M R + SW+ M++G+ NG ++F MR+ G + T LA+
Sbjct: 173 GDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALL 232
Query: 386 SACG 389
SACG
Sbjct: 233 SACG 236
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G+ + A E+ G D + L CG+ + K++H Y +++ G +
Sbjct: 202 KNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVC 261
Query: 314 ---LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
L N +I+MY C S++ AR++F+ + + + SW+ +I+GY G + L+LF +M
Sbjct: 262 NGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMV 321
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+G P+E T ++V +AC A+ +S + G L+G+ CG L
Sbjct: 322 VVGAVPDEVTVISVLAACNQISALRLG-ATVQSYVVKRGYVVNVVVGTALIGMYANCGSL 380
Query: 431 FEAQQFIEQ 439
A + ++
Sbjct: 381 VCACRVFDE 389
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQS-TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMAD 340
TL + N K A ++H + T+R + L K+ Y CG M A+ +FD +
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 341 RSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
++ W+ MI GYA N L L+ +M G +P+ T+ V ACG
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACG 135
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 222/442 (50%), Gaps = 38/442 (8%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDK--- 271
S+ + G Q++ + ++ P D V ++ D + +EA+E+ +
Sbjct: 191 SWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMID--GYVWAARFREALEMFREMQY 248
Query: 272 -GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
V AD ++ C E + V Y + I+ D + N +I+MY KCGS+
Sbjct: 249 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 308
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF M R +W +I G A NG +E +++F +M ++ P+E TF+ V +AC
Sbjct: 309 ALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTH 368
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A +++ F SM + I+P HY ++ +LG+ G + EA I+Q +P P + W
Sbjct: 369 AGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQ-MPMTPNSTIW 427
Query: 451 EALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKK----IPTP 489
L R+HG+ ++ + E +++LDP + D ++ I
Sbjct: 428 GTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEK 487
Query: 490 PPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLH 541
KK S+++ + EF + +Y E + ++ + Y PD V
Sbjct: 488 GIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESI--ISDLNNVGYFPDVTEVFV 545
Query: 542 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGREL 601
++ ++ K++ L +HSE+LAIA+ L+S+ T +RI+KNLR+C DCHNAIK++SR+ GRE+
Sbjct: 546 EVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREV 605
Query: 602 IVRDNKRFHHFKDGKCSCGDYW 623
+VRD RFHHF+ G CSC DYW
Sbjct: 606 VVRDRTRFHHFRHGFCSCKDYW 627
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH + S + DL + N +++MY +C M A +VFD M RS+ SW +++G A G
Sbjct: 144 QVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLG 203
Query: 358 LGDEGLQLFEQM 369
DE LF++M
Sbjct: 204 QVDEARDLFDRM 215
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 191/352 (54%), Gaps = 28/352 (7%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H L+S R +++ N ++ MY K GS+ DAR+ F M R + +W+ MI G++ +GL
Sbjct: 360 LHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGL 419
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL 418
G EGL+ F++M G PN TF+ V AC +E+ +F + +F + P +HY
Sbjct: 420 GREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYT 479
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP 478
+VG+L K G +A+ F+ P E W AL N + + L E + P
Sbjct: 480 CIVGLLSKAGMFKDAEDFMRTA-PIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYP 538
Query: 479 SKADPKKIPT-PPPKKRTAISILDGKSRL-------------VEFRNPT-LYRDDE---- 519
+ + + + K R + + +S + + RN T ++ +E
Sbjct: 539 NDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHP 598
Query: 520 -------KLK-ALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPAR 571
K+K L++++ Y PD V HD+D+E +E L YHSE+LA+AYGL+ TP
Sbjct: 599 EITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPEN 658
Query: 572 TPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+PL + KN+R+C DCH+AIK++S+I R +++RD+ RFHHF+DG+CSC DYW
Sbjct: 659 SPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 283 LFELCGNPKWYENAKKVHDYFL---QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
L ++C N + + +H + + QS+ D+ N +I +Y KCG AR+VFD M
Sbjct: 37 LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSACGSADAIEE-- 396
+R++ SW M+ GY ++G E L+LF+ M +PNE VF +C S+ IEE
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156
Query: 397 ----AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
F+ M EF + LV + C EA + ++ LP+ + F A
Sbjct: 157 QFHGCFLKSGLMSHEFVRNT-------LVYMYSLCSGNGEAIRVLDD-LPYCDLSVFSSA 208
Query: 453 LRNY 456
L Y
Sbjct: 209 LSGY 212
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
+F+ C + E K+ H FL+S + + N ++ MY C +A RV D +
Sbjct: 141 VVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC 200
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IH 400
+ + ++GY + G EG ++ +M K L + T+L+ C + + A IH
Sbjct: 201 DLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIH 260
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE----QKLPFEPTAEFWEALRNY 456
S G + E ++ + GKCG + AQ+ + Q + T
Sbjct: 261 --SRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIM-------- 310
Query: 457 ARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISI 499
D +D + E ++L SK D K++ PP + AIS+
Sbjct: 311 -----DAYFQDKSFEEALNL-FSKMDTKEV--PPNEYTFAISL 345
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 260 GKVKEAIELMDKGVKADASC----FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G KE E++ + K D + + LC N + A+++H ++ ++ +
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEAS 275
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I MYGKCG + A+RVFD+ +++ +++ Y + +E L LF +M +
Sbjct: 276 GAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 376 PNEQTF 381
PNE TF
Sbjct: 336 PNEYTF 341
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 183/335 (54%), Gaps = 35/335 (10%)
Query: 321 MYGKCGSMTDARRVFDHMA---DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
MY KCGS+ +A VF + DR + +W+ MINGYA +G E L+ F Q+R GL P
Sbjct: 1 MYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPT 60
Query: 378 EQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+ TF+ V +AC + ++E +M+ E+GI P EHY +V +LG+ G + EA +
Sbjct: 61 DITFIGVLNACSHSGLVDEGRALLAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLV 120
Query: 438 EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD-----------LDPSKADPKK- 485
+ + +P A W +L R+H ++ L + +V L A K
Sbjct: 121 -RSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVANGLANSGTYVLLSNMYAAAGKW 179
Query: 486 ---------IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMK 528
+ +K S ++ R+VEF R+ +Y E++ ++ + +
Sbjct: 180 REVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARAR 239
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
+VP T VLHD+D AKE+AL HSE+LA+A+GLISTP RT ++I+KNLR C DCH
Sbjct: 240 --GHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHA 297
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+K++S GR+++ RD RFHHF DG CSCGDYW
Sbjct: 298 VLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 332
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 208/386 (53%), Gaps = 29/386 (7%)
Query: 266 IELMDKGVK-ADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
IE+ +GV D ++ C N K++H + S L ++N +++MY K
Sbjct: 225 IEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAK 284
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
C + AR VF+ M R + SW +I G A +G E L L++QM ++PNE TF+ +
Sbjct: 285 CSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGL 344
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC A + + F++M ++ ISP + + + +L + GHL EA+ I + +P +
Sbjct: 345 IYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLI-KTMPHK 403
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDL---DPSK-----------------ADPK 484
P W AL + + HG+ ++ + ++ L +PS + +
Sbjct: 404 PDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVR 463
Query: 485 KIPTPPPKKRT-AISILD-GKSRLVEFRNPTLY-RDDE---KLKALN-QMKESTYVPDTR 537
K+ T KR S +D GK V T + DE LK L+ +M++ Y+PDT
Sbjct: 464 KLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTS 523
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
YVLHD++++ KE+ L +HSER A+AYGL+ T +RI+KNLR+CGDCH +K+ S IV
Sbjct: 524 YVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIV 583
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
+E+IVRD R+HHFKDG+CSC D+W
Sbjct: 584 HKEIIVRDATRYHHFKDGRCSCNDFW 609
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D + TL + C + K+VH F+ S D V+ + +++MY KCG + AR VF
Sbjct: 103 DHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVF 162
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + ++ SW M++GYA +GL DE ++LF
Sbjct: 163 DSILVKTSVSWTAMLSGYARSGLKDEAMELF 193
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 284 FELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSM 343
+LC + NAKK+H ++S + L N +++ YGKC + DA +FD M R
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 344 DSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFE 402
SW ++ Y L ++ L +F M LQP+ + + AC S ++ +
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLG----K 124
Query: 403 SMKSEFGISPGTEHYL---GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA-LRNYAR 458
+ + F +SP + + LV + KCG A+ + L T+ W A L YAR
Sbjct: 125 QVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILV--KTSVSWTAMLSGYAR 182
Query: 459 IHGDIDLEDHAEELMV 474
L+D A EL +
Sbjct: 183 ----SGLKDEAMELFL 194
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 209/386 (54%), Gaps = 39/386 (10%)
Query: 258 QEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ GK +EA+ E+ KG+K D +L C K+VH Y ++ + +L
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL- 372
+N ++++Y +CG + +A+ +FD M D++ SW +I G A NG G E ++LF+ M
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
GL P E TF+ + AC ++E F +F M+ E+ I P EH+ +V +L + G + +
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA----------- 481
A ++I + +P +P W L +HGD DL + A ++ L+P+ +
Sbjct: 379 AYEYI-KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 482 ------DPKKIPT----PPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKA 523
D +KI KK S+++ +R+ EF ++ +Y KLK
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY---AKLKE 494
Query: 524 LN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
+ +++ YVP V D+++E KE A++YHSE++AIA+ LISTP R+P+ ++KNLRV
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 554
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKR 608
C DCH AIK++S++ RE++VRD R
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H ++S + + N ++ +Y CG + A +VFD M ++ + +W+ +ING+A+NG
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHY 417
+E L L+ +M G++P+ T +++ SAC A+ +H +K G++
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNLHSS 260
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
L+ + +CG + EA+ ++ + + + W +L
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMV--DKNSVSWTSL 294
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 190/347 (54%), Gaps = 30/347 (8%)
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+S ++G++++ N +I MY K G + A+ VF +M ++ +W+ +I G++ +GLG E L
Sbjct: 46 KSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALS 105
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+F+ M G +PN TF+ V AC ++E F +F + +F I PG EHY +VG+L
Sbjct: 106 MFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLL 165
Query: 425 GKCGHLFEAQQFI-EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
+ G L EA+ F+ ++ ++ + W L N +H D E ++ L+P
Sbjct: 166 SRSGRLDEAENFMRSHQINWDVVS--WRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGT 223
Query: 484 ---------------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKL- 521
K + KK +S L+ ++ F + + + L
Sbjct: 224 YILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLI 283
Query: 522 -----KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
L++++ YVPD VLHDI+ E K L YHSE+LA+AYGL+ TP+ P+R+
Sbjct: 284 YENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIRV 343
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLR+C DCH AIK++S++ R ++VRD RFHHF++G CSCGDYW
Sbjct: 344 IKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGYCSCGDYW 390
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 234/441 (53%), Gaps = 64/441 (14%)
Query: 245 VLPPSVADLARLCQEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVH 300
V+P S +AR Q + KEA+E+ + +A + F ++ + C + ++H
Sbjct: 306 VIPWSFM-IARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIH 364
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGD 360
+ ++ + D+ ++N ++++Y KCG M ++ +F R+ +W+ +I G+ G G+
Sbjct: 365 CHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGE 424
Query: 361 EGLQLFE-------------------------------QMRKLGLQPNEQTFLAVFSACG 389
+ L+LF Q+ L ++P++ TF+ V SAC
Sbjct: 425 KALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACA 484
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+A +++ +F SM + GI P EHY +V +LG+ GHL +A + I++ +PF+P+
Sbjct: 485 NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDE-IPFQPSVMV 543
Query: 450 WEALRNYARIHGDIDLEDHAEELMVDLDP---------------------SKADPKKIPT 488
W AL IH DI+L + + +++++P + K +
Sbjct: 544 WRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKR 603
Query: 489 PPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHD 542
KK +S ++ + + F +P + + L+ L+ + K++ Y+P+ VL D
Sbjct: 604 KGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLD 663
Query: 543 IDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELI 602
++ E KE+ L HSERLA+++G+I TP+ +P+RI+KNLR+C DCH AIK +S++V RE++
Sbjct: 664 VEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIV 723
Query: 603 VRDNKRFHHFKDGKCSCGDYW 623
VRD RFHHF++G CSCGDYW
Sbjct: 724 VRDINRFHHFQEGLCSCGDYW 744
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L + G K + F ++F+ C + ++ K VH L+S DL + +
Sbjct: 222 KEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVAL 281
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+++Y K G + DARR F+ + + + W MI YA + E +++F QMR+ + PN+
Sbjct: 282 LDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQ 341
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
TF +V AC + + + IH +K G+ L+ V KCG +
Sbjct: 342 FTFASVLQACATMEGLNLGNQIHCHVIK--IGLHSDVFVSNALMDVYAKCGRM 392
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 21/188 (11%)
Query: 264 EAIELMDK----GVKADASCFYTLFEL-----CGNPKWYENAKKVHDYFLQSTIRGDLVL 314
EAIEL + G + + F T+ +L CG W +H + + +
Sbjct: 122 EAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGW-----GIHACIFKLGHESNAFV 176
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+I+ Y CG + AR VFD + + M SW M+ +A+N E L+LF QMR +G
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLF 431
+PN TF +VF AC +A + +H ++KS + + + Y+G L+ + K G +
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL----DLYVGVALLDLYTKSGDID 292
Query: 432 EAQQFIEQ 439
+A++ E+
Sbjct: 293 DARRAFEE 300
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ MY K + DA ++FD M +R+ S+ +I GYA++ E ++LF ++
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 371 KLGLQPNEQTFLAVFSACGSADAIE 395
+ G + N F + S D E
Sbjct: 132 REGHELNPFVFTTILKLLVSTDCGE 156
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 195/354 (55%), Gaps = 28/354 (7%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H Y S + + +++MY KCG + +A R F+ M +++ +W+ +I+ YA
Sbjct: 139 RQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQY 198
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G +++F+ M G P+ TFL+V +AC EE +F+ M+ +SP EH
Sbjct: 199 GQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNSMSPWKEH 258
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y ++ LG+ G F+ Q + ++PFE W ++ + RI+G+ DL A E + +
Sbjct: 259 YSCVIDALGRAG-CFDKIQKVLDEMPFEADPVIWSSILHSCRIYGNQDLATVAAENLFTM 317
Query: 477 DPSKADP--------------------KKIPTP-PPKKRTAISILDGKSRLVEFR----- 510
P+ A KKI +K + S ++ K ++ F
Sbjct: 318 VPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHT 377
Query: 511 NPTLYRDDEKLKAL-NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
NP + E+L+ L +M + Y PDT LH +D + K ++L YHSERLAIA+ LI+TP
Sbjct: 378 NPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESLKYHSERLAIAFALINTP 437
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
TP+ ++KNL C DCH AIK++S+IV R++IVRD++RFHHFKDG CSCGDYW
Sbjct: 438 PGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHHFKDGFCSCGDYW 491
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F +L + G + +++H + + + + N +I+MY KCG + A+ +F + +
Sbjct: 21 FASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALIDMYSKCGMLDAAKTIFANKS 80
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
D++ SW +I G NG +E LQLF MR+ GL P+ T
Sbjct: 81 DKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 220/402 (54%), Gaps = 32/402 (7%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
++ Q G +EA+++ K G K + F + N + K++H +++
Sbjct: 519 ISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGY 578
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ ++N +I +YGKCGS+ DA+ F M R+ SW+ +I + +G G E L LF+Q
Sbjct: 579 TSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQ 638
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M++ GL+P++ TF+ V +AC +EE +F+SM +E GI P +HY +V +LG+ G
Sbjct: 639 MKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAG 698
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP---------- 478
L A++F+E+ +P + W L + ++H ++++ + A + +++L+P
Sbjct: 699 QLDRAKRFVEE-MPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLS 757
Query: 479 ----------SKADPKKIPTP-PPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLK 522
S+ +KI +K S ++ K+ + F +P + L
Sbjct: 758 NAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLS 817
Query: 523 ALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
LN ++ + Y + ++ H+ ++E K+ HSE+LA+A+GL+S P+ PLR+IKNLR
Sbjct: 818 HLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLR 877
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH +K S ++GRE+++RD RFHHF +G CSCGDYW
Sbjct: 878 VCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + + G ++ N +I++Y K G + ARRVF+ ++ R SW +++GYA NG
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEF 408
LG+E ++L+ +M + G+ P ++ SAC + + IH + K F
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGF 174
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++ GV+ + + + C + +++H +++ + D+ ++ +I+MY K G
Sbjct: 336 MLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGW 395
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A+R+ D + ++ + SW MI GY + E L+ F++M+ G+ P+ + SA
Sbjct: 396 LDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISA 455
Query: 388 CGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCG---HLFEAQQFIEQK 440
C A+ + IH S G S + GLV + +CG F + + IE K
Sbjct: 456 CAGIKAVHQGSQIHARVYVS--GYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHK 510
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+A Q KEA+E + G+ D + C K ++H S
Sbjct: 418 IAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGY 477
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D+ + N ++ +Y +CG +A F+ + + +W+ +I+G+A +GL +E L++F +
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMK 537
Query: 369 MRKLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M + G + N TF++ SA + AD + IH +K+ G + TE L+ + GKC
Sbjct: 538 MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT--GYTSETEISNALISLYGKC 595
Query: 428 GHLFEAQQ-FIEQ 439
G + +A+ F E
Sbjct: 596 GSIEDAKMDFFEM 608
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 250 VADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
VA L+ Q G +EA+ E+ GV ++ C + ++ + +H +
Sbjct: 112 VAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYK 171
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
+ + N +I +Y +C S A RVF M +++ +I+G+A G GD L +
Sbjct: 172 QGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGI 231
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSA 391
F++M+ GL P+ T ++ +AC +
Sbjct: 232 FDEMQLSGLSPDSVTIASLLAACSAV 257
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFELCG 288
N + + QC GD+ L + D E+ G+ D+ +L C
Sbjct: 212 FNTLISGHAQCGHGDRAL--GIFD--------------EMQLSGLSPDSVTIASLLAACS 255
Query: 289 NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHL 348
K++H Y L++ + D ++ ++++Y K G + +A ++FD ++ W+L
Sbjct: 256 AVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNL 315
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
M+ Y + +F +M G++PN+ T+ + C
Sbjct: 316 MLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTC 355
>gi|388507702|gb|AFK41917.1| unknown [Medicago truncatula]
Length = 206
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 143/189 (75%), Gaps = 5/189 (2%)
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+ FESMK E+GI PG EHYLG+V + G G L EA +FIE +P E E WE LRN+AR
Sbjct: 1 MQFESMK-EYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIEN-MPIEAGVELWETLRNFAR 58
Query: 459 IHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRD- 517
IHGD++ ED A+EL+ LDPSKA K+P P KK++AI++L+ K+R+ E+R Y++
Sbjct: 59 IHGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEE 118
Query: 518 -DEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 575
D KL+ L QM+E+ YVPDTRYVLHDID+E KE+AL YHSERLAIAYGLISTP RT LR
Sbjct: 119 GDVKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 178
Query: 576 IIKNLRVCG 584
IIKNLR+CG
Sbjct: 179 IIKNLRICG 187
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 210/392 (53%), Gaps = 56/392 (14%)
Query: 259 EGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
E ++ + +++ V+A + + C + E ++H +++T D+V+ N +
Sbjct: 425 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNAL 484
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I+MY KCGS+ DAR VFD M + SW+ MI+GY+ +GL
Sbjct: 485 IDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL-------------------- 524
Query: 379 QTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
AC +A +++ +F SM + GI P EHY +V +LG+ GHL +A + I+
Sbjct: 525 --------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID 576
Query: 439 QKLPFEPTAEFWEALRNYARIHGDIDL-------------EDHAEELMVD--------LD 477
+ +PF+P+ W AL IH DI+L +D A +++ D
Sbjct: 577 E-IPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWD 635
Query: 478 PSKADPKKIPTPPPKKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKEST 531
+ K + KK +S ++ + + F +P + + L+ L+ + K++
Sbjct: 636 NVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAG 695
Query: 532 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK 591
Y+P+ VL D++ E KE+ L HSERLA+++G+I TP+ +P+RI+KNLR+C DCH AIK
Sbjct: 696 YIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIK 755
Query: 592 IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+S++V RE++VRD RFHHF++G CSCGDYW
Sbjct: 756 CISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Query: 264 EAIELMDK----GVKADASCFYTLFEL-----CGNPKWYENAKKVHDYFLQSTIRGDLVL 314
EAIEL + G + + F T+ +L CG W +H + + +
Sbjct: 122 EAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGW-----GIHACIFKLGHESNAFV 176
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
+I+ Y CG + AR VFD + + M SW M+ +A+N E L+LF QMR +G
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236
Query: 375 QPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLF 431
+PN TF +VF AC +A + +H ++KS + + + Y+G L+ + K G +
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL----DLYVGVALLDLYTKSGDID 292
Query: 432 EAQQFIEQ 439
+A+ E+
Sbjct: 293 DARXAFEE 300
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 263 KEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L + G K + F ++F+ C + ++ K VH L+S DL + +
Sbjct: 222 KEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVAL 281
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
+++Y K G + DAR F+ + + + W MI YA + E +++F QMR+ + PN+
Sbjct: 282 LDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQ 341
Query: 379 QTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
TF +V AC + + + IH +K G+ L+ V KCG +
Sbjct: 342 FTFASVLQACATMEGLNLGNQIHCHVIK--IGLHSDVFVSNALMDVYAKCGRM 392
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 245 VLPPSVADLARLCQEGKVKEAIELMDKGVKA----DASCFYTLFELCGNPKWYENAKKVH 300
V+P S +AR Q + KEA+E+ + +A + F ++ + C + ++H
Sbjct: 306 VIPWSFM-IARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIH 364
Query: 301 DYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYADNGLG 359
+ ++ + D+ ++N ++++Y KCG M ++ +F R+ + W+ +I G+ G G
Sbjct: 365 CHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDG 424
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYL 418
++ L+LF M + +Q E T+ + AC S A+E IH ++K+ F +
Sbjct: 425 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN-- 482
Query: 419 GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + +A+ + + + W A+ + +HG
Sbjct: 483 ALIDMYAKCGSIKDARLVFDLMNKQDEVS--WNAMISGYSMHG 523
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DL N ++ MY K + DA ++FD M +R+ S+ +I GYA++ E ++LF ++
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKC 427
+ G + N F + S D E + IH F + + ++G L+ C
Sbjct: 132 REGHELNPFVFTTILKLLVSMDCGELGWGIH----ACIFKLGHESNAFVGTALIDAYSVC 187
Query: 428 GHLFEAQQFIEQKL 441
G + A++ + L
Sbjct: 188 GRVDVAREVFDGIL 201
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 35/364 (9%)
Query: 288 GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH 347
G +W VH Y ++S + D VL +IEMY KCGS+ A RVF + + + W
Sbjct: 325 GTGRW------VHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWT 378
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE 407
+I G +GL ++ L+LF++M + GL+P+ TF+ V +AC A E+A +F+ M +
Sbjct: 379 SVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYD 438
Query: 408 FGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLED 467
+GI P EHY L+ VL + GHL EA+ IE ++P + W +L + +R HG+I + +
Sbjct: 439 YGIKPSIEHYGCLIDVLCRAGHLEEAKDTIE-RMPIKANKVIWTSLLSGSRKHGNIRMGE 497
Query: 468 HAEELMVDLDPSKADPKKIPTPP-------PKKRTA--------------ISILDGKSRL 506
+A + ++DL P I + K R S ++ + +
Sbjct: 498 YAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSI 557
Query: 507 VEF--RNPTLYRDDEKLKALNQMKE----STYVPDTRYVLHDIDQE-AKEQALLYHSERL 559
EF + + + +E L +MK+ + ++PDT VL ++++ KE L HSERL
Sbjct: 558 HEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERL 617
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
AIA+GL++ +P+RIIKNLR+C DCH K++S I RE+I+RD RFHHFK G CSC
Sbjct: 618 AIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSC 677
Query: 620 GDYW 623
D+W
Sbjct: 678 KDFW 681
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 260 GKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
G+++ A+E+ ++ + D+ + L + E A+ V D + IR V N +I
Sbjct: 194 GEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFD---RMPIRNS-VSWNAMI 249
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
Y K G A+ +FD M +RS+ +W+ MI GY N + L+LFE M + + PN
Sbjct: 250 NGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYT 309
Query: 380 TFL-AVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQF 436
T L AV +A G ++H +KS F T+ LG L+ + KCG + A +
Sbjct: 310 TILGAVSAASGMVSLGTGRWVHSYIVKSGF----KTDGVLGTLLIEMYSKCGSVKSALR- 364
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDID 464
+ + +P + W ++ +HG ++
Sbjct: 365 VFRSIPKKKLGH-WTSVIVGLGMHGLVE 391
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + K++H L+ D + + ++ MY KCG + R+VFD M D+ + SW
Sbjct: 124 CARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSW 183
Query: 347 HLMINGYADNGLGDEGLQLFEQM 369
+ +I+GYA G + L++FE+M
Sbjct: 184 NSLIDGYARCGEIELALEMFEEM 206
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 246 LPPSVADLARL--CQEGKVKEAIEL-MDKGV-KADASCFYTLFELCGNPKWYENAKKVHD 301
LP + ARL QEGK + L + GV K S +++ CG E +KV D
Sbjct: 117 LPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGE---IELCRKVFD 173
Query: 302 YFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE 361
D+V N +I+ Y +CG + A +F+ M ++ SW ++I+G + +G +
Sbjct: 174 RMEDK----DVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEA 229
Query: 362 GLQLFEQM 369
+F++M
Sbjct: 230 ARDVFDRM 237
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYG--KCGSMTDARRVFDHMADRSMD 344
CG + A ++H +++ ++++++ +Y + ++ A +FD + + ++
Sbjct: 25 CGTER---EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81
Query: 345 SWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFES 403
SW+L+I Y +N ++ + LF ++ P+ T V C A++E IH
Sbjct: 82 SWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIHGLV 140
Query: 404 MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDI 463
+K FG+ LV + KCG + E + + ++ + + + YAR G+I
Sbjct: 141 LKIGFGVDKFVLS--SLVSMYSKCGEI-ELCRKVFDRMEDKDVVSWNSLIDGYARC-GEI 196
Query: 464 DL 465
+L
Sbjct: 197 EL 198
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 195/357 (54%), Gaps = 33/357 (9%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K +HD ++ + ++ + N V+ MY K GS+ AR++F M + SW+ MI+ +A +
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQH 585
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF-GISPGTE 415
G D+ L+ F +M G PN+ TF++V SAC +++ F S+ +F ISP E
Sbjct: 586 GHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAE 645
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V ++ + G L A++FI P +P + +++H D++ + E +++
Sbjct: 646 HYYCMVDLIARAGKLDAAEKFIAAA-PLKPDRVIHSTMLGASKVHKDVERARKSAEHLME 704
Query: 476 LDPSKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF----- 509
L P ++ + + +K A S + K R+ EF
Sbjct: 705 LTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDT 764
Query: 510 ---RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
R P + E + +M ++ Y PDT +LHD+ E K++ L YHSE+LAIA+GLI
Sbjct: 765 TNARTPEILE--ELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLI 822
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
ST T LRIIKNLRVCGDCH A K +S+I GRE++VRD+ RFHHF +G CSCGDYW
Sbjct: 823 STAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVKAD F LC + + +H + ++S I+ D++L+N +++MYG C S DA
Sbjct: 399 GVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDA 458
Query: 332 RRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
RVF M R SW+ MI YA L E L LF+QM+ G P+ +F+A SAC +
Sbjct: 459 SRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAA 518
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++ E + + ++ E G+ ++ + K G L A++ K+P P W
Sbjct: 519 QASLAEGKLLHDRIR-ETGLESNMTVANAVLNMYAKSGSLVLARKMF-GKMPL-PDVISW 575
Query: 451 EALRNYARIHGDID 464
+ + HG D
Sbjct: 576 NGMISAFAQHGHAD 589
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 280 FYTLFELC-GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
F + C +P+ E +++H + + D ++ ++ MYGKC S+ DAR+VFD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA- 397
+ + W+ MI YA ++ +Q+F M G++ TF+ V AC +E A
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ + E + LV G CG L +A
Sbjct: 222 LVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQA 257
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 246 LPPSVADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHD 301
L + A + + Q + EA+EL + +GVK D + C P+ E + +H
Sbjct: 268 LILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHG 327
Query: 302 YFLQSTIRGDLVLN--NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
+ + IR D +N N +I MYGKCGS+ +A VF M R + SW+ +I + +
Sbjct: 328 FMRE--IRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQH 385
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL 418
E L L M+ G++ ++ +F+ C +++A+ + IH S E GI
Sbjct: 386 PEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIH--SWIVESGIKADVMLDN 443
Query: 419 GLVGVLGKC 427
++ + G C
Sbjct: 444 AILDMYGSC 452
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 29/242 (11%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L ++ + + + K+VH +S + + + ++ MY CGS+ DA+ FD M +
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD--AIEEAFIH 400
+W +I + G ++ L LF M+ G+ P + F+AV AC SAD +EE
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGAC-SADPELLEEG--- 119
Query: 401 FESMKSEFGISPGT----EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
+ G+ GT +HY+ L+ + GKC + +A++ + + + E+ +
Sbjct: 120 ----RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFD-GIRHKRVVEWNAMIT 174
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTL 514
YA+ +DH E+ + + K ++ T I +LD S+L + L
Sbjct: 175 AYAQ-------QDHHEQAIQVFYAMLLEGVK-----AERITFIGVLDACSKLKDLEVAKL 222
Query: 515 YR 516
+
Sbjct: 223 VK 224
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKV--------HDYFLQSTIRGDLVLNNKVI 319
++ +GVKA+ F + + C K E AK V HD+ S+ LV
Sbjct: 192 MLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALV------ 245
Query: 320 EMYGKCGSMTDARRVFD-HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
YG CG + A R F H + + + MI Y DE L+LF+ M G++ +
Sbjct: 246 NFYGSCGDLEQAFRAFSRHRLELILAT--AMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 379 QTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+AV +AC +EE IH ++ + ++ G L+ + GKCG L EA +
Sbjct: 304 IACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGN----ALINMYGKCGSLEEAVE 359
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 194/366 (53%), Gaps = 31/366 (8%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + K VH + + ++ + +I+MY KCGS+ +AR +FD M ++++ SW
Sbjct: 424 CAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSW 483
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI+GY +G G E L+L++ M + P TFL+V AC ++E F M +
Sbjct: 484 NAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTN 543
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
E+ I+PG EH +V +LG+ G L EA + I + W AL +H + DL
Sbjct: 544 EYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLA 603
Query: 467 DHAEELMVDLDPSKADPKKIPTP--PPKK---RTAISILDGKSR---------LVEF--- 509
A + + +LD A + + KK A+ + K+R L+E
Sbjct: 604 KLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDR 663
Query: 510 ------------RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
++ +Y E+L A +M E+ Y P T L+D+++E KE + HSE
Sbjct: 664 PHVFMAGDHLHPQSEAIYSYLERLTA--KMIEAGYQPVTEAALYDVEEEEKEHMVKVHSE 721
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LAIA+GL+ST T +RIIKNLRVC DCHNA K +S++ R ++VRD RFHHF+DG C
Sbjct: 722 KLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVC 781
Query: 618 SCGDYW 623
SCGDYW
Sbjct: 782 SCGDYW 787
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ +H + +++ + D +++ + +Y + M AR +FD M +++M+SW+ MI+GYA
Sbjct: 332 ARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQ 391
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISP 412
NGL + + LF+ M++L +QPN T + SAC A+ ++H K E +
Sbjct: 392 NGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYV 451
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
T L+ + KCG + EA+ ++
Sbjct: 452 MT----ALIDMYAKCGSIAEARSIFDR 474
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 237 NQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKG-VKADASCFYTLFELCGNPKWYEN 295
+ P+ D +L ++ LA L ++ + ++D G V+ D++ +
Sbjct: 173 DTVPSPDTILWNTL--LAGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAM 230
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
+ VH Y ++ + + ++ +Y KCG M A+ +FD M + + +++ +I+GY+
Sbjct: 231 GRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSV 290
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
NG+ + ++LF+++ G +PN T +AV
Sbjct: 291 NGMVESSVELFKELTASGWRPNSSTLVAVI 320
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
A+ +H + + D + + + ++Y K DAR+VFD + W+ ++ G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP- 191
Query: 356 NGLGDEGLQLFEQMRKLG-LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGT 414
G E L+ F +M G ++P+ T + A A E + + +G+ G
Sbjct: 192 ---GSEALEAFVRMVDAGRVRPDSTTLASSLRA-----AAEASHMAMGRCVHGYGVKCGL 243
Query: 415 ---EHYL-GLVGVLGKCGHLFEAQQFIEQ 439
EH + GL+ + KCG + AQ ++
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDR 272
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 197/364 (54%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C N K++H +S ++ + + ++MY KCGS+ ++ +F + +++++ W
Sbjct: 273 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELW 332
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ +I+G+A + E + LFE+M++ G+ PNE TF ++ S CG +EE F+ M++
Sbjct: 333 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 392
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+G+SP HY +V +LG+ G L EA + I + +PF+PTA W +L R++ +++L
Sbjct: 393 TYGLSPNVVHYSCMVDILGRAGLLSEAYELI-KSIPFDPTASIWGSLLASCRVYKNLELA 451
Query: 467 DHAEELMVDLDPSKA---------------------DPKKIPTPPPKKRTAISILDGKSR 505
+ A E + +L+P A K + KK S +D K +
Sbjct: 452 EVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Query: 506 LVEFR-----NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ F +P + L L + ++ Y P + LHD++ KE+ L+ HSE+L
Sbjct: 512 VHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKL 571
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+ +GL+ P +P+RI+KNLR+C DCH +K S R +IVRD RFHHF DG CSC
Sbjct: 572 ALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSC 631
Query: 620 GDYW 623
GD+W
Sbjct: 632 GDFW 635
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
+ +LC AK H ++ + GD+ L N +I Y KCG + AR+VFD M +RS
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG-SADAIEEAFIHF 401
+ SW+ MI Y N + E L +F +MR G + +E T +V SACG + DA+E +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 402 ESMKS--EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
S+K+ + + GT L+ + KCG + +A Q E
Sbjct: 187 LSVKTCIDLNLYVGT----ALLDLYAKCGMIKDAVQVFE 221
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+E+ ++G K ++ CG KK+H +++ I +L + ++++Y KC
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + DA +VF+ M D+S +W M+ GY N +E L L+ + +++ L+ N+ T +V
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 386 SACGS-ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC + A IE +H KS FG + V + KCG L E+ + E
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVAS--SAVDMYAKCGSLRESYIIFSE--VQE 326
Query: 445 PTAEFWEAL 453
E W +
Sbjct: 327 KNLELWNTI 335
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 209/402 (51%), Gaps = 39/402 (9%)
Query: 259 EGKVKEAIELMDKGVKAD-----ASCFYTLFELCGNPKWYENAKKVHDY---FLQSTIRG 310
+G ++A +L+D+ K D +L C E K +H Y + I
Sbjct: 190 KGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINC 249
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
DLVL +++MY KCGS+ A +VF M R++ +W+ +I G A +G G++ + LF+QM
Sbjct: 250 DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQME 309
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
L P++ TF+A+ AC A ++E F++MK++F I P EHY +V +L + +
Sbjct: 310 HDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKV 369
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------- 483
+A FIE +P + + W L R G DL + +++L+P
Sbjct: 370 DDALAFIEN-MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNL 428
Query: 484 --------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKL 521
K++ +K S ++ + +F + +Y E++
Sbjct: 429 YAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEM 488
Query: 522 KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+ + +VP T VL DI++E KE +L HSE+LAIA GLISTP+ +P+RI+KNLR
Sbjct: 489 TRRVNL-DGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLR 547
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH+ +K+ S++ RE++ RD RFHHFK+G CSC D+W
Sbjct: 548 VCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
++++GV D + + C + ++ H L++ DL + N +I+ Y CGS
Sbjct: 102 MVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGS 161
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL-GLQPNEQTFLAVFS 386
A VFD R + +W++MIN + + GL ++ L ++M KL L+P+E T +++
Sbjct: 162 FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVP 221
Query: 387 ACGSADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGHL-FEAQQFIEQKLPF 443
AC +E F+H + +F I+ LV + KCG + Q F ++
Sbjct: 222 ACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 281
Query: 444 EPTAEFWEALRNYARIHG 461
T W AL +HG
Sbjct: 282 VFT---WNALIGGLAMHG 296
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 194/362 (53%), Gaps = 30/362 (8%)
Query: 288 GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH 347
G W K++H ++ + D + N ++ MY G++ DA VF + +S+ SW+
Sbjct: 340 GTLDW---GKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE 407
+I G A +G G +F QM +L +P+E TF + SAC +E+ F M S
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 408 FG-ISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
I +HY +V +LG+CG L EA++ IE ++ +P W AL + R+H D+D
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIE-RMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 467 DHAEELMVDLDPSKADPKKIPT---------------PPPKKRTAISILDGKSRLV---- 507
+ A + +LD + + + K+ I G S +V
Sbjct: 516 EKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGK 575
Query: 508 --EFRN---PTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAI 561
EF + P R EKL+ L + +KE Y PD R LHD++ E KE+ L YHSERLAI
Sbjct: 576 KHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAI 635
Query: 562 AYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGD 621
A+GLI+T + + ++KNLRVC DCH IK++S +VGRE+++RD RFHHFK+G CSCGD
Sbjct: 636 AFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGD 695
Query: 622 YW 623
YW
Sbjct: 696 YW 697
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 9/238 (3%)
Query: 216 YQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKA 275
Y ++ G+ N+L + N ++ P D V S+ C G + A++L D+ +
Sbjct: 69 YTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC--GDMNTAVKLFDEMPER 126
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
+ + C + A+++ F Q ++ D N ++ Y + G + DA ++F
Sbjct: 127 SVVSWTAMVNGCFRSGKVDQAERL---FYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLF 182
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
M +++ SW MI G N E L LF+ M + ++ + F V +AC +A A
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFH 242
Query: 396 EAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
I + + G L+ C + ++++ ++K+ W AL
Sbjct: 243 MG-IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV--HEQVAVWTAL 297
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K+ + F + C N + +VH ++ + ++ +I Y C + D+R
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+VFD + W +++GY+ N ++ L +F M + + PN+ TF + ++C +
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 393 AIE 395
++
Sbjct: 341 TLD 343
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
L K+I Y + + DA +FD M R + SW+ MI+G + G + ++LF++M
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 212/407 (52%), Gaps = 45/407 (11%)
Query: 260 GKVKEAIELMDK-----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVL 314
G+ E I+L+D+ G++ + T CG ++K+VH+ + + + +
Sbjct: 405 GRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCV 464
Query: 315 NNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
N +++MYGK G + AR +FD R++ +W+ M Y G+ L L M++ G
Sbjct: 465 ANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGY 524
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
+P+ TF+++ S CG + +EEA +F +M+ EFGI P +HY ++ +L + G L +A+
Sbjct: 525 RPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAE 584
Query: 435 QFIEQKLPFEPTAE-FWEALRNYARIHGD------------IDLE----------DHAEE 471
FI + P + W AL R GD +D+E A
Sbjct: 585 DFIARISVSSPASSPMWMALLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHV 644
Query: 472 LMVDL-------DPSKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYR 516
+ ++ D + + K + +K S++ K+RL EF R +Y
Sbjct: 645 ALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYA 704
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
+ +L+ M + YV DT V H++ + K L HSE+LA+A+G++STP + LRI
Sbjct: 705 ELRRLE--RAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRI 762
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLR CGDCH AIK++S I GRE++VRD+ RFHHF++G CSCGDYW
Sbjct: 763 IKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 809
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 13/216 (6%)
Query: 244 QVLPPSVADLARLCQEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKV 299
QV+ A + G KEA+ L+D +GVK + F + C + ++ + +
Sbjct: 291 QVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRAL 347
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
H +S ++ + N ++ MYG+CGS+ D+ ++F MA++ + SW+ I +A +G
Sbjct: 348 HLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRS 407
Query: 360 DEGLQLFEQMR-KLGLQPNEQTFLAVFSACGS-ADAIEEAFIHFESMKSEFGISPGTEHY 417
DE ++L +QMR + GL+P+ T + SACG AD +H + E G+ T
Sbjct: 408 DECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERA--RELGLESETCVA 465
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
GLV + GK G + A+ ++ L T W A+
Sbjct: 466 NGLVDMYGKAGDVDTARYIFDRALRRNVTT--WNAM 499
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++ GV+ D F +CG K E+ +H + DL + N ++ MYGKCG
Sbjct: 112 QMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCG 171
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A+++FD + +++ SW ++++ +A+NG E L M G++P++ L + +
Sbjct: 172 RLDLAKQLFDCLEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLN 231
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEH----YLGLVGVLGKCGHLFEAQQFIEQKLP 442
C S ++E M ++ + G + L+ + +CG + +A++ E+
Sbjct: 232 VCSSRGVLDED----SWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVAD 287
Query: 443 FEP-TAEFWEAL 453
E W A+
Sbjct: 288 HSAQVIECWNAM 299
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 18/179 (10%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI-------RGDLVLNNKVIEMYGK 324
GV + L + CG + K++H +S + G L N +++MYGK
Sbjct: 9 GVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGK 68
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
CG +A+R FD +A +++ SW ++ Y GL + L+ F QM K G++P+ FLA
Sbjct: 69 CGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAA 128
Query: 385 FSACGSADAIEE-AFIHFES----MKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ CG +E+ A IH + + S+ I LV + GKCG L A+Q +
Sbjct: 129 LNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGN------ALVSMYGKCGRLDLAKQLFD 181
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 212/408 (51%), Gaps = 38/408 (9%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCG-NPKWYENAKKVHDYFLQ 305
A LA Q G+ + AI EL GVK + F ++ +C K+ H + ++
Sbjct: 468 AMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIK 527
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
S + L +++ ++ MY K G + A VF ++ + SW+ MI+GYA +G + L +
Sbjct: 528 SRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 587
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
F++M+K ++ + TF+ VF+AC A +EE +F+ M + I+P EH +V +
Sbjct: 588 FKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 647
Query: 426 KCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS------ 479
+ G L +A + I+ +P + W + R+H +L A E ++ + P
Sbjct: 648 RAGQLEKAMKVIDN-MPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYV 706
Query: 480 --------------KADPKKIPTPP-PKKRTAISILDGKSRLVEFR--------NPTLYR 516
+A +K+ KK S ++ K++ F +Y
Sbjct: 707 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYM 766
Query: 517 DDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
E L ++K+ Y PDT YVL DID E KE L HSERLAIA+GLI+TP +PL I
Sbjct: 767 KLEDLS--TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLI 824
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHF-KDGKCSCGDYW 623
IKNLRVCGDCH IK++++I RE++VRD+ RFHHF DG CSCGD+W
Sbjct: 825 IKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
++G+ +EA L G++ D S F ++ ++ +++H ++ D+
Sbjct: 74 RDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS 133
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ +++ Y K + D R VFD M +R++ +W +I+GYA N L +E L LF +M+ G
Sbjct: 134 VGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEG 193
Query: 374 LQPNEQTFLAVF 385
QPN TF A
Sbjct: 194 TQPNSFTFAAAL 205
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH +++ + + ++N +I +Y KCG++ AR +FD +S+ +W+ MI+GYA NG
Sbjct: 219 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 278
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
L E L +F MR ++ +E +F ++ C
Sbjct: 279 LDLEALGMFYSMRLNHVRLSESSFASIIKLCA 310
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ S F ++ +LC N K +++H ++ D + ++ Y KC +M DA
Sbjct: 295 VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDAL 354
Query: 333 RVFDHMADRS-MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
R+F + SW MI+G+ N +E + LF +M++ G++PNE T+ + +A
Sbjct: 355 RLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
+VH +++ + +++ Y K G + +A +VF + ++ + +W M+ GYA G
Sbjct: 418 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAG 477
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+ +++F ++ K G++PNE TF ++ + C + A
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTA 513
>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 206/385 (53%), Gaps = 31/385 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
+++ G++ D+ + K++H + ++ + + + +++MY CGS
Sbjct: 1 MLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGS 60
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
M A +VFD + + W MIN +G G + + +F++M + G+ P+ +FLA+ A
Sbjct: 61 MNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYA 120
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
C + ++E + + M S++ + P EHY +V +LG+ G EA +FI + +P EP +
Sbjct: 121 CSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFI-KSMPLEPKS 179
Query: 448 EFWEALRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKI 486
W AL RIH + +L A + +++L+P K K+
Sbjct: 180 VVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKM 239
Query: 487 PTPPPKKRTAISILDGKSRLVEF--RNPTLYRDDE----KLKALNQM--KESTYVPDTRY 538
+K A S ++ + + F R+ + +RD + KL + + +E YV DT +
Sbjct: 240 TEQGLRKDPACSWIEIGNTVHTFTARDHS-HRDSQAIHLKLAEITEKLRREGQYVEDTSF 298
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VLHD+ +E K L HSERLAI++GLIST + TPLRI KNLRVCGDCH K++S++
Sbjct: 299 VLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFE 358
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD RFHHF G CSCGD+W
Sbjct: 359 REIVVRDANRFHHFSGGTCSCGDFW 383
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 209/398 (52%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDL 312
Q G + A L +K G+K + ++ + C P + ++ H ++ +
Sbjct: 478 QAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAI 537
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+++ ++ MY + G++ A+ VF+ DR + SW+ MI+GYA +G + ++ F QM
Sbjct: 538 CVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEAS 597
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+Q + TFLAV C + E +F+SM + I+P EHY +V + + G L E
Sbjct: 598 GIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDE 657
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
I + +PF A W L R+H +++L + + ++ L+P +
Sbjct: 658 TMSLI-RDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYA 716
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-N 525
K + KK S + K+++ F +P + +KLK +
Sbjct: 717 AAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIIT 776
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K+ Y P+T +VLHDI ++ KE L+ HSERLA+A+GLI+TP TPL+I+KNLRVCGD
Sbjct: 777 RLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGD 836
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH +K++S I RE+I+RD RFHHF G CSCGD+W
Sbjct: 837 CHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
RG++ +++MY KCGS+ + VF+ M +++ +W ++ G A + E + LF +
Sbjct: 132 RGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFR 191
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR G+ PN TF +V SA S A++ +H +S+K FG L+ + KC
Sbjct: 192 MRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK--FGCRSSVFVCNSLMNMYAKC 249
Query: 428 GHLFEAQ 434
G + +A+
Sbjct: 250 GLVEDAK 256
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 4/187 (2%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMA 339
F ++ + + ++VH ++ R + + N ++ MY KCG + DA+ VF+ M
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWME 263
Query: 340 DRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF- 398
R M SW+ ++ G N E LQLF + R + + T+ V C + + A
Sbjct: 264 TRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ 323
Query: 399 IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYAR 458
+H +K F ++ L KCG L +A W A+ +
Sbjct: 324 LHSCVLKHGFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVS-WTAIISGCI 380
Query: 459 IHGDIDL 465
+GDI L
Sbjct: 381 QNGDIPL 387
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K S + T+ +LC N K A+++H L+ + + + Y KCG + DA
Sbjct: 299 KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALN 358
Query: 334 VFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+F R++ SW +I+G NG + LF +MR+ + PNE T+ A+ A
Sbjct: 359 IFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++ Y K GS DA +F + + + +W M++ +A G + LF +M G
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PNE T +V AC A + F ++ ++ LV + + G++ A
Sbjct: 497 IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Query: 434 QQFIEQK 440
Q E++
Sbjct: 557 QIVFERQ 563
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 214/402 (53%), Gaps = 39/402 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG--- 310
+ G+ EA+ + D+ G + DA ++ + C + E + VH FL++ G
Sbjct: 227 RAGEFSEALRMFDQMMGNGFRPDAVVLSSVLKACAHLGALERGRWVHR-FLKAEGLGRSP 285
Query: 311 -DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
+++L +++MY KCG M +A VFD + + + W+ MI G A NG G L+LF +M
Sbjct: 286 DNVMLETALVDMYCKCGCMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRM 345
Query: 370 RKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGH 429
+G PNE TF+ V AC ++E F SM + GI P EHY L +LG+ G
Sbjct: 346 LDMGFVPNESTFVVVLCACTHTGRVDEGKEIFRSM-CDHGIEPRREHYGCLADLLGRAGL 404
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------- 478
L EA+ + +P EP A W AL + +H ++ + + + +++L+P
Sbjct: 405 LEEAEAVL-LDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFN 463
Query: 479 ----------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRN-PTLYRDDEKLKAL--- 524
+KA K + KK T +S ++ + EFR+ T + ++ AL
Sbjct: 464 LYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRQIYALLED 523
Query: 525 --NQMKESTYVPDTRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
+++ YV DT VL D+D +E K L YHSERLA+A+G+++TP P+RI+KNLR
Sbjct: 524 MEQRLQLIGYVKDTSQVLMDMDDEEDKGNTLSYHSERLALAFGILNTPRHMPIRIVKNLR 583
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VC DCH K++S++ RE+I+RD RFH F+ G CSC D+W
Sbjct: 584 VCRDCHVYAKLVSKLYQREIIMRDRHRFHLFRGGVCSCNDFW 625
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A++V D +++ D N ++ YGKCG + AR VF M +R + SW MI+
Sbjct: 169 DARRVFDTSGATSL--DAFSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACI 226
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE-FGISPG 413
G E L++F+QM G +P+ +V AC A+E +K+E G SP
Sbjct: 227 RAGEFSEALRMFDQMMGNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPD 286
Query: 414 TEHY-LGLVGVLGKCGHLFEA 433
LV + KCG + EA
Sbjct: 287 NVMLETALVDMYCKCGCMDEA 307
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQLFEQMR 370
V+ N ++++Y G ++DARRVFD S+D SW+ M++GY G + ++F +M
Sbjct: 152 VVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCGDLEAAREVFVRMP 211
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ GL ++ A+ AC A EA F+ M G P + L VL C HL
Sbjct: 212 ERGL----VSWSAMIDACIRAGEFSEALRMFDQMMGN-GFRPDA---VVLSSVLKACAHL 263
Query: 431 --FEAQQFIEQKLPFE 444
E +++ + L E
Sbjct: 264 GALERGRWVHRFLKAE 279
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 201/395 (50%), Gaps = 41/395 (10%)
Query: 264 EAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA+EL + G + DA ++ CG+ KK+H Y + + +L+L N +I
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY KCG + AR VF++M R + SW MI+ Y +G G + + LF +++ GL P+
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 380 TFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
F+ +AC A +EE F+ M + I+P EH +V +LG+ G + EA +FI Q
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI-Q 470
Query: 440 KLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA------------------ 481
+ EP W AL R+H D D+ A + + L P ++
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Query: 482 --------DPKKIPTPPPKKRTAISILDGKSRLVEFRNP---TLYRDDEKLKALNQMKES 530
K + P ++ + + + +P +YR+ + L + +MKE
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL--VKKMKEL 588
Query: 531 TYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP-----ARTPLRIIKNLRVCGD 585
YVPD+ LHD+++E KE L HSE+LAI + L++T + +RI KNLR+CGD
Sbjct: 589 GYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGD 648
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCG 620
CH A K++S+I RE+I+RD RFH F+ G CSC
Sbjct: 649 CHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+ VH + +R + L K++ Y + AR+VFD + +R++ ++MI Y +N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
G EG+++F M ++P+ TF V AC + I IH + K G+S
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK--VGLSSTLF 176
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQ 439
GLV + GKCG L EA+ +++
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDE 200
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
V+ D F + + C +K+H + + L + N ++ MYGKCG +++AR
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
V D M+ R + SW+ ++ GYA N D+ L++ +M + + + T ++ A
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 215/399 (53%), Gaps = 36/399 (9%)
Query: 258 QEGKVKEAIELMDKGVKAD----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ KEA+ L + D ++ ++ C ++ VH Y + +R D +
Sbjct: 201 QNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSI 260
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L+ +I+MY KCGS+ A + F R + ++ I+G A NG +E LQLFEQM+ G
Sbjct: 261 LSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEG 320
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ P+ +++AV AC A +E+ F +F SM GI P +HY +V +LG+ G L EA
Sbjct: 321 ISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEA 380
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
++F+ +P +P W AL R++G+ ++ L+V+ D +
Sbjct: 381 EKFV-ASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAE 439
Query: 481 ----ADPKKIPTPPPKKRT----AISILDGKSRLVEF--------RNPTLYRDDEKLKAL 524
D +++ +++ S+++ + EF + +Y E++ +
Sbjct: 440 SMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEI--V 497
Query: 525 NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
++K+ Y +TR V+ D+++E KE + +HSE+LA+A+G + T + + LRI+KN+R+C
Sbjct: 498 KEIKKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVAFGFLYTKSGSTLRIVKNIRICS 557
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH AIK++S++ R++ +RD K FHHF++G CSC DYW
Sbjct: 558 DCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDYW 596
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 280 FYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDH-- 337
F LF+ C N ++ ++ H ++++ D+ + N +I Y CG + DAR VFD
Sbjct: 95 FTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESS 154
Query: 338 -----------------------------MADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
M +R+ SW++MI+GYA NG E L LF +
Sbjct: 155 ELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFRE 214
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEE-AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
M+ L +PN ++V SAC A++ ++H K + L+ + KC
Sbjct: 215 MQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSA--ALIDMYAKC 272
Query: 428 GHLFEAQQ 435
G + A Q
Sbjct: 273 GSIDLAMQ 280
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 209/398 (52%), Gaps = 33/398 (8%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKW-YENAKKVHDYFLQSTIRGDL 312
Q G + A L +K G+K + ++ + C P + ++ H ++ +
Sbjct: 478 QAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAI 537
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+++ ++ MY + G++ A+ VF+ DR + SW+ MI+GYA +G + ++ F QM
Sbjct: 538 CVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEAS 597
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+Q + TFLAV C + E +F+SM + I+P EHY +V + + G L E
Sbjct: 598 GIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDE 657
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--------- 483
I + +PF A W L R+H +++L + + ++ L+P +
Sbjct: 658 TMSLI-RDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYA 716
Query: 484 ------------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-N 525
K + KK S + K+++ F +P + +KLK +
Sbjct: 717 AAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIIT 776
Query: 526 QMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGD 585
++K+ Y P+T +VLHDI ++ KE L+ HSERLA+A+GLI+TP TPL+I+KNLRVCGD
Sbjct: 777 RLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGD 836
Query: 586 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
CH +K++S I RE+I+RD RFHHF G CSCGD+W
Sbjct: 837 CHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
RG++ +++MY KCGS+ + VF+ M +++ +W ++ G A + E + LF +
Sbjct: 132 RGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFR 191
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
MR G+ PN TF +V SA S A++ +H +S+K FG L+ + KC
Sbjct: 192 MRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK--FGCRSSVFVCNSLMNMYAKC 249
Query: 428 GHLFEAQ 434
G + +A+
Sbjct: 250 GLVEDAK 256
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
++VH ++ R + + N ++ MY KCG + DA+ VF+ M R M SW+ ++ G N
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
E LQLF + R + + T+ V C + + A +H +K F ++
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNV- 339
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
L KCG L +A W A+ + +GDI L
Sbjct: 340 -MTALADAYSKCGELADALNIFSMTTGSRNVVS-WTAIISGCIQNGDIPL 387
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
K S + T+ +LC N K A+++H L+ + + + Y KCG + DA
Sbjct: 299 KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALN 358
Query: 334 VFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+F R++ SW +I+G NG + LF +MR+ + PNE T+ A+ A
Sbjct: 359 IFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ ++ Y K GS DA +F + + + +W M++ +A G + LF +M G
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++PNE T +V AC A + F ++ ++ LV + + G++ A
Sbjct: 497 IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Query: 434 QQFIEQK 440
Q E++
Sbjct: 557 QIVFERQ 563
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 212/390 (54%), Gaps = 32/390 (8%)
Query: 258 QEGKVKEAIELMD----KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G+ +EA+ L +GVK + ++ C + + H Y ++ I+ +
Sbjct: 225 QVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVR 284
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L ++++Y KCG M A VF M ++++ +W +NG A NG G++ L+LF M++ G
Sbjct: 285 LGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDG 344
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ PN TF++V C ++E HF+SM++EFGI P +HY LV + + G L +A
Sbjct: 345 VTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDA 404
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------AD 482
I+Q +P + A W +L + +R++ +++L A + M++L+ S AD
Sbjct: 405 VSIIQQ-MPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYAD 463
Query: 483 P----------KKIPTPPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALNQ- 526
+ + + +K+ S+++ + EF +P D K +++
Sbjct: 464 SDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRR 523
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
++ + Y DT V+ DID+E KE AL HSE+ AIA+G++S A P+RI+KNLRVCGDC
Sbjct: 524 LRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGDC 583
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGK 616
H ++S+I RE+IVRD RFHHFKDG+
Sbjct: 584 HQVSMMISKIFNREIIVRDRNRFHHFKDGR 613
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 195/380 (51%), Gaps = 29/380 (7%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
G+K D + F + +C + ++ +H + + + ++++Y K G + D+
Sbjct: 733 GLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDS 792
Query: 332 RRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSA 391
VF + +W M+ YA +G G + ++ FE M GL P+ TF + +AC +
Sbjct: 793 STVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHS 852
Query: 392 DAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWE 451
+EE +FE+M + I P +HY +V ++G+ G L +A I++ +P EP++ W
Sbjct: 853 GLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKE-MPMEPSSGVWG 911
Query: 452 ALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIPTPPPKK- 493
AL R++ D L A + + +L+P D +I +K
Sbjct: 912 ALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKG 971
Query: 494 ---RTAISILDGKSRLVEF-----RNPTLYRDDEKLKAL-NQMK-ESTYVPDTRYVLHDI 543
+ S ++ +++ +F +P + +KLK + +MK E + T +VLHD+
Sbjct: 972 LVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDV 1031
Query: 544 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIV 603
D++ KE+ + HSE++A+A+GL+ P+ I KNLR+CGDCH K +S I R +I+
Sbjct: 1032 DEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIII 1091
Query: 604 RDNKRFHHFKDGKCSCGDYW 623
RD+KRFHHF +G CSC DYW
Sbjct: 1092 RDSKRFHHFLEGSCSCRDYW 1111
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 260 GKVKEAIELM---DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
GK E + M + G + + F ++ C + E +H ++S + ++ + N
Sbjct: 617 GKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVN 676
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +YGK G + + ++F+ ++ +++ SW+ MI + NGL +EGL F R +GL+P
Sbjct: 677 ALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKP 736
Query: 377 NEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
++ TFLAV C + + IH M G + T L+ + K G L ++
Sbjct: 737 DQATFLAVLRVCEDIGVVRLSQGIHGLIMFC--GFNANTCITTALLDLYAKLGRLEDSST 794
Query: 436 -FIEQKLPFEPTAEFWEALRNYARIHG 461
F+E P + W A+ HG
Sbjct: 795 VFLEIT---SPDSMAWTAMLAAYATHG 818
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D V ++ +CG + AR++F+ M ++ +W+ MI+GYA G E L LF M+
Sbjct: 181 DFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQ 240
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEE---AFIHFESMKSEFGISPGTEHYLGLVGVLGKC 427
G++ N + ++V SAC A+++ A + E K + + GT LV + KC
Sbjct: 241 LEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTT----LVDLYAKC 296
Query: 428 GHLFEAQQ 435
G + +A +
Sbjct: 297 GDMDKAME 304
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 196/355 (55%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K+VH ++ + + N +I MY KCGS++DA + F ++ ++ SW+ +IN Y+
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G E L F+QM ++PN T + V SAC +++ +FESM SE+G+SP E
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY+ +V +L + G L A++FI Q++P +P A W L + +H ++++ + A +++
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFI-QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 476 LDP----------------SKADPK-----KIPTPPPKKRTAISILDGKSRLVEF----- 509
L+P K D + K+ KK S ++ K+ + F
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 510 RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P E + L + E YV D +L+++ E K+ + HSE+LAI++GL+S
Sbjct: 950 NHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSL 1009
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
PA P+ ++KNLRVC DCH IK +S++ RE+IVRD RFHHF+ G CSC DYW
Sbjct: 1010 PATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 266 IELMDKGVKADASCFYTLFELC-GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
+ ++ + V + F + E C G ++ +++H L +R V+ N +I++Y +
Sbjct: 175 VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR 234
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
G + ARRVFD + + SW MI+G + N E ++LF M LG+ P F +V
Sbjct: 235 NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSV 294
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
SAC +++E + + G S T LV + G+L A+
Sbjct: 295 LSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++D+G+++D C + + +++H S DL N ++ +Y +CG
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF-LAVF 385
+ ++ F+ +W+ +++G+ +G +E L++F +M + G+ N TF AV
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ-QFIEQKLPFE 444
+A +A+ + +H ++ ++ G TE L+ + KCG + +A+ QF+E E
Sbjct: 701 AASETANMKQGKQVH--AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 445 PTAEFWEALRNYARIHG 461
+ W A+ N HG
Sbjct: 759 VS---WNAIINAYSKHG 772
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C+ ++ ++ G+ F ++ C + E +++H L+ D + N
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +Y G++ A +F +M+ R +++ +ING + G G++ ++LF++M GL+P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ- 435
+ T ++ AC SAD + ++ G + + L+ + KC + A
Sbjct: 388 DSNTLASLVVAC-SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 436 FIEQKLPFEPTAEFWEA----------LRNYARIHGDIDLED 467
F+E ++ W LRN RI + +E+
Sbjct: 447 FLETEV---ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E +++H +++ + + + + +I+MY K G + A + A + + SW MI GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISP 412
D+ L F QM G++ +E SAC A++E IH ++ S G S
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS--GFSS 624
Query: 413 GTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
LV + +CG + E+ EQ + A W AL
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA--WNAL 663
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ +K+H L+ + + L+ K+ + Y G + A +VFD M +R++ +W+ MI
Sbjct: 102 DEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC--GSA--DAIEE 396
A L E LF +M + PNE TF V AC GS D +E+
Sbjct: 162 ASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ 208
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G ++A+EL + G++ D++ +L C +++H Y T +
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY----TTKLG 419
Query: 312 LVLNNKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE---GLQ 364
NNK+ + +Y KC + A F ++ W++M+ Y GL D+ +
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFR 476
Query: 365 LFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEF 408
+F QM+ + PN+ T+ ++ C G + E+ IH + +K+ F
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ--IHSQIIKTNF 521
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 202/395 (51%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +E I+ +K G++ D L + C + + A+ +H + + +
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++ Y K G ++ + VF + +W M+ GYA +GLG E ++LFE M GL+
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF + SAC + + E +F M +GI P +HY +V +LG+CG L +A +
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------- 478
I Q +P EP A W AL R+HG+I+L E +++++P
Sbjct: 397 VI-QNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASR 455
Query: 479 SKADPKKIPTPPPK---KRT--AISILDGKSRLVEFRNPTLYRDDEKL-----KALNQMK 528
S D K+ + KRT SI G F + + EK+ + L +++
Sbjct: 456 SWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIR 515
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
++ Y T YVL D+++E KE + HSE+LAIA+GL+ + L I KNLR+CGDCH+
Sbjct: 516 KAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHS 575
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I R +I+RD KRFHHF DG CSC DYW
Sbjct: 576 TAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ K +H + ++ ++ + N +I MYGK G +T A R+F+ + D + SW+ +I
Sbjct: 154 DAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQ 213
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG EG+ F +MR+LG++ +E T LA+ AC
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDEGTILALLQAC 248
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
N +++H +S + D + ++++ Y K G DA ++FD M + + SW+ +I+G++
Sbjct: 57 NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS 116
Query: 355 DNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISP 412
L F M+ ++ ++PNE T L++ SAC G+ DA +IH FGI
Sbjct: 117 R--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDA--GKYIH------GFGIKV 166
Query: 413 GTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G + L+ + GK G L A + E +P +P W ++
Sbjct: 167 GGTLEVKVANSLINMYGKSGDLTSACRLFEA-IP-DPNTVSWNSI 209
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 213/399 (53%), Gaps = 40/399 (10%)
Query: 260 GKVKEAIEL---MDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G K+A+E+ M KG ++ + ++ E + +H Y S IR D VL
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+ +I+MY KCG + A VF+ + ++ +W MING+A +G + + F +MR+ G++
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ ++ + +AC +EE +F M S G+ P EHY +V +LG+ G L EA++
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP------------ 483
FI +P +P W+AL R+ G++++ +++D+ P +
Sbjct: 433 FI-LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
Query: 484 ---------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDE--KLKALNQM----- 527
++ +K S++D L EF + DD K K +N M
Sbjct: 492 NWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEF----VVEDDSHPKAKEINSMLVEIS 547
Query: 528 ---KESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
+ + Y P T VL ++++E KE L YHSE++A A+GLIST P+RI+KNLR+C
Sbjct: 548 DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 607
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH++IK++S++ R++ VRD KRFHHF+DG CSC DYW
Sbjct: 608 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 23/230 (10%)
Query: 248 PSVADLARLCQEGKVKEAIEL----MDKGVKAD---ASCFYTLFELCGNPK-----WYEN 295
PSV L + GK++E ++ + G D S ++ +CG K +Y+N
Sbjct: 132 PSV--LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 296 AKKVHDYFLQSTIR---GDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
+ D + + R G++VL N +I+ Y + G AR +FD M RS+ SW+ MI+G
Sbjct: 190 IIE-KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 248
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGIS 411
Y+ NG + +++F +M+K ++PN T ++V A ++E ++H + S GI
Sbjct: 249 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS--GIR 306
Query: 412 PGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L+ + KCG + E + ++LP E W A+ N IHG
Sbjct: 307 IDDVLGSALIDMYSKCG-IIEKAIHVFERLPRENVIT-WSAMINGFAIHG 354
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS-------MTDARRVF 335
LF N + + ++H F++S D + +++ C + + A ++F
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRF---CATSDLHHRDLDYAHKIF 82
Query: 336 DHMADRSMDSWHLMINGYADNGLGDE-----GLQLF-EQMRKLGLQPNEQTFLAVFSACG 389
+ M R+ SW+ +I G++++ DE + LF E M ++PN TF +V AC
Sbjct: 83 NQMPQRNCFSWNTIIRGFSES---DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 139
Query: 390 SADAIEEAF-IHFESMKSEFGISPGTEHYLG-LVGVLGKCGHLFEAQ 434
I+E IH ++K FG G E + LV + CG + +A+
Sbjct: 140 KTGKIQEGKQIHGLALKYGFG---GDEFVMSNLVRMYVMCGFMKDAR 183
>gi|115453917|ref|NP_001050559.1| Os03g0582100 [Oryza sativa Japonica Group]
gi|113549030|dbj|BAF12473.1| Os03g0582100 [Oryza sativa Japonica Group]
Length = 629
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 219/426 (51%), Gaps = 34/426 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQE--GKVKEAIELMDKGVKADASCFYTLFEL 286
L + +Q + D ++ S+ C+E G + ++ + +K + T+F +
Sbjct: 207 LEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSV 266
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG E K+VH + L+S D + N ++ MY CG + DA++VF ++ S+
Sbjct: 267 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 326
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI+ +G E L+ F QM+ GL P+E T L + S+ A + E F SM
Sbjct: 327 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 386
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
GI P +HY +V +L + G + +A + I + +PFE A W + H DI+
Sbjct: 387 IEGIKPMYQHYACVVDMLARSGEIGKAMKTINE-MPFEAEAPLWRIVLGACSKHRDIETG 445
Query: 467 DHAEELMVDLDPSKA-----------------DPKKIPTPPPK----KRTAISILDGKSR 505
E++ +++P +A + +K+ + + K A S ++ R
Sbjct: 446 KRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQR 505
Query: 506 LVEF-----RNPT---LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
F +P +YR+ ++L ++ +K + YVPD + H+I ++ KE++L YH E
Sbjct: 506 TYRFGVDDRSHPISREIYRNLDRL--ISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCE 563
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LA A+G ++ P+ LRI+KNLRVCGDCH A K S + GRE+I+RDN+RFHHF G C
Sbjct: 564 KLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFC 623
Query: 618 SCGDYW 623
SCGDYW
Sbjct: 624 SCGDYW 629
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 305 QSTIRGDL------VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
Q+ +RG L +L V+ Y C AR+VFD M R+ +W+ +I GYA G
Sbjct: 96 QAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGR 155
Query: 359 GDEGLQLFEQMRKLG--LQPNEQTFLAVFSACG 389
+E + LF M++ G + P+ TF A+ S G
Sbjct: 156 REEAILLFRDMKREGSHVAPDRYTFPALLSGIG 188
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPN 377
++ +Y ++ DA+ FD + W MI+ Y + + L +F M ++P
Sbjct: 197 LVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPT 256
Query: 378 EQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ + VFS CG +E +H S+KS + L+ + CG + +AQ+
Sbjct: 257 QFVYSTVFSVCGRMGILEMGKQVHAHSLKSN--TEKDAAMFNALLTMYSDCGCINDAQK 313
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 206/406 (50%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A LA G +E ++L+ K GV D F E +++H ++
Sbjct: 625 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 684
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + N +MY KCG + + ++ +RS+ SW+++I+ +G +E F
Sbjct: 685 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 744
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M ++G++P TF+++ +AC +++ +++ + +FG+ P EH + ++ +LG+
Sbjct: 745 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 804
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--- 483
G L EA+ FI K+P +P W +L +IHG++D A E + L+P
Sbjct: 805 SGRLAEAETFI-SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 863
Query: 484 ------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRD 517
K++ KK+ A S + K ++ F + +Y
Sbjct: 864 SSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAK 923
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
E +K L +KES YV DT L D D+E KE L HSERLA+AY L+STP + +RI
Sbjct: 924 LEDIKKL--IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 981
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH+ K +SR++GR +++RD RFHHF+ G CSC DYW
Sbjct: 982 KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFE----LCGNPKWY 293
Q P D + S+ +A +G+ +A+ L+ + + S Y F C P ++
Sbjct: 411 QMPTKDLISWNSL--MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 468
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E + +H + S + + ++ N ++ MYGK G M+++RRV M R + +W+ +I GY
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 528
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A++ D+ L F+ MR G+ N T ++V SAC
Sbjct: 529 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ VH ++ +R ++ N +I MY K G + AR +FD M R+ SW+ M++G
Sbjct: 90 TGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV 149
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI------EEAFIHFESMKSEF 408
GL EG++ F +M LG++P+ ++ +ACG + ++ F+ + S+
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209
Query: 409 GISPGTEHYLGLVGVLGKCGHLFE 432
+S H G+ G++ +FE
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFE 233
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 271 KGVKADASCFYTLFELCGNP-KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+GV ++ ++ C P E K +H Y + + D + N +I MY KCG ++
Sbjct: 547 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 606
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
++ +F+ + +R++ +W+ M+ A +G G+E L+L +MR G+ ++ +F SA
Sbjct: 607 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 666
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+EE + + G + + + KCG + E + +
Sbjct: 667 KLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 713
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 267 ELMDKGVKADASCFYTLFELCG-NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++ D G+K + +L CG + + +VH + +S + D+ ++ ++ +YG
Sbjct: 163 KMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVY 222
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE----------GLQLFEQMRKLGLQ 375
G ++ +R+VF+ M DR++ SW ++ GY+D G +E G Q+ Q+ K GL+
Sbjct: 223 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLE 282
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGIS 411
++ S GS ++ A F+ M IS
Sbjct: 283 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++S + L + N +I M G G++ A +FD M++R SW+ + YA NG +E
Sbjct: 277 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 336
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
++F MR+ + N T + S G D
Sbjct: 337 RIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+ +++ TL + G+ + + +H ++ + + N ++ MY G +A
Sbjct: 348 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF M + + SW+ ++ + ++G + L L M G N TF + +AC + D
Sbjct: 408 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
E+ I + G+ LV + GK G + E+++ + Q + A W AL
Sbjct: 468 FEKGRI-LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA--WNAL 524
>gi|115468046|ref|NP_001057622.1| Os06g0472300 [Oryza sativa Japonica Group]
gi|113595662|dbj|BAF19536.1| Os06g0472300, partial [Oryza sativa Japonica Group]
Length = 397
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 210/397 (52%), Gaps = 34/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q G AIEL + G ++ ++ C E ++VH + L+ DL+
Sbjct: 4 QSGDGVGAIELFMRMKEAGFLSNQGTLTSVLRACTGLVTLEVGRQVHAHVLKYD--KDLI 61
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L+N +++MY KCGS+ DA +F M R + SW MI+G A NG E L++F+ M+ G
Sbjct: 62 LHNALLDMYCKCGSLQDADALFGRMPQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEG 121
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+PN T + V AC A +E+ + +F SM+ FGI P EH +V +LG+ G L +A
Sbjct: 122 PRPNHITMVGVLFACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNCMVDLLGRAGKLDDA 181
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------------- 480
+FI + + F+P + W L R+H + DL +A + ++ L+P
Sbjct: 182 VKFIHE-MNFQPDSVIWRTLLGACRMHKNADLAAYAAKEILRLEPDDQGARILLSNTYAD 240
Query: 481 ----ADPKK----IPTPPPKKRTAISILD-GKSRLV----EFRNPTLYRDDEKLKAL-NQ 526
AD +K + KK S ++ GK V + +P ++L L ++
Sbjct: 241 LRQWADAEKSWKMMRDRGVKKDPGRSWIELGKQVHVFIAGDLSHPCSESIIQELSRLFSR 300
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+ Y P T +VL D+ E KE L YHSE+LAIA+G ++ P+RI+KNLR+CGDC
Sbjct: 301 VTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLRICGDC 360
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H K++S+ G+ +I+RD RFHHF+DG CSC DYW
Sbjct: 361 HAFAKLVSKSEGKVIIIRDPVRFHHFQDGVCSCNDYW 397
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 216/397 (54%), Gaps = 40/397 (10%)
Query: 263 KEAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYF---LQSTIRGDLVLN 315
KEA+ L + +++ S ++ C + + + +H Y L+ G L
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGS-ALR 357
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + A +VF+ M +S+ SW+ MI G+A +G + LF +MRK G++
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIE 417
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ T + + SAC + ++ F+S+ ++ I+P EHY ++ +LG G EA++
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEE 477
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
I +P EP W +L ++HG+++L + + +++++P +
Sbjct: 478 IIHM-MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAG 536
Query: 482 ---DPKKIPT----PPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ 526
D +I KK S ++ S + EF ++ +YR E++ L
Sbjct: 537 RWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVL-- 594
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
++E+ +VPDT VL ++++E KE AL +HSE+LAIA+GLIST T L ++KNLRVC +C
Sbjct: 595 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNC 654
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K++S+I RE++ RD RFHHF+DG CSC DYW
Sbjct: 655 HEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 217 QQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKAD 276
+ VS GH +PN P + C ++ +EG+ A ++M G + D
Sbjct: 73 RMVSXGH-VPNAYT-FPFLLKSCAK------------SKTFEEGRQIHA-QVMKLGCELD 117
Query: 277 ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFD 336
+L + E+A+KV D Q D+V +I Y G + AR+VFD
Sbjct: 118 RYAHTSLISMYARNGRLEDARKVFDXSSQR----DVVSCTALITGYASRGDVRSARKVFD 173
Query: 337 HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEE 396
+ +R + SW+ MI GY +N +E L+LF++M + ++P+E T ++V SAC + +IE
Sbjct: 174 XITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIEL 233
Query: 397 AFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
+ G + +G+ KCG + A E
Sbjct: 234 GREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD-LVLNNKVIEMYGKC 325
E+M V+ D ++ C E +++H G L + N I +Y KC
Sbjct: 205 EMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC 264
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G + A +F+ ++ + + SW+ +I GY L E L LF++M + G PN+ T L+V
Sbjct: 265 GDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVL 324
Query: 386 SACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
AC AI+ +IH K G++ G+ L+ + KCG + A Q +
Sbjct: 325 PACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMM--H 382
Query: 445 PTAEFWEALRNYARIHG 461
+ W A+ +HG
Sbjct: 383 KSLSSWNAMIFGFAMHG 399
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 210/397 (52%), Gaps = 36/397 (9%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +A+EL + GV+AD + + E A+ V + + I + L
Sbjct: 209 GLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLC 268
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N +I+ KCG + A VF+ M RS+ SW +I+ A G G E +++FE+M+ G+
Sbjct: 269 NALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVP 328
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ F+ V +AC A ++E +F++MK E+GI P EHY +V + G+ G + A +
Sbjct: 329 PDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAME 388
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPS---------------- 479
F+ + +P +P W +L + R HG ++L + ++ P+
Sbjct: 389 FV-RTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQ 447
Query: 480 ----KADPKK-IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ 526
K++ ++ + KK SI++ + EF + +YR E++ +
Sbjct: 448 RWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMA--RE 505
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
++ ++ T VL D+D+E KE AL +HSE+LAIA+ L+ TP T +R++KNLRVC DC
Sbjct: 506 LRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDC 565
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H AIK +S++ RE++VRD RFH FKDG CSC D+W
Sbjct: 566 HAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGS--MTDARRVFDHMADRSMDSWHLMINGYAD 355
+ H L+ D ++N +I MY G + DAR VFD M S +W MI GY
Sbjct: 148 QAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVR 207
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
GL + ++LF +M+ G+Q +E T + V +A A+E A ++ E GI
Sbjct: 208 GGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVERE-GIGKSVT 266
Query: 416 HYLGLVGVLGKCGHLFEAQQFIE 438
L+ L KCG + A E
Sbjct: 267 LCNALIDTLAKCGDVDGAVAVFE 289
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 215/412 (52%), Gaps = 46/412 (11%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A LA Q G A+E +K V+ D+ ++ CG E ++++D +
Sbjct: 180 AFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
I ++++ N ++M+ KCG+ AR +F+ M R++ SW MI GYA NG E L LF
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF 299
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESM--KSEFGISPGTEHYLGLVGVL 424
M+ GL+PN TFL V SAC A + E +F M ++ + P EHY +V +L
Sbjct: 300 TTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL 359
Query: 425 GKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD--------- 475
G+ G L EA +FI +K+P EP W AL +H D+ L +++V+
Sbjct: 360 GRSGLLEEAYEFI-KKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYH 418
Query: 476 ---------------LDPSKADPKKIPTPPPKKRTAISILDGKSRLVEF--------RNP 512
+D ++ +K+ T KK A S ++ + ++ F ++
Sbjct: 419 VLLSNIYAAAGKWDCVDKVRSKMRKLGT---KKVAAYSSVEFEGKIHFFNRGDKSHPQSK 475
Query: 513 TLY-RDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPAR 571
+Y + DE LK + +M YVPDT V HD++ E KE +L +HSE+LAIA+GLI
Sbjct: 476 AIYEKLDEILKKIRKM---GYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPG 532
Query: 572 TPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
P+R++KNLR C DCH K +S + E+I+RD RFHHF++G CSC ++W
Sbjct: 533 HPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
KK+H L++ L +++E G M AR+VFD M + W+ + GY N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTE 415
L E L L+++MR LG++P+E T+ V A F +H +K FG
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 416 HYLGLV----GVLGKCGHLFEAQQ 435
L ++ G L LFE+ Q
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQ 171
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 202/395 (51%), Gaps = 32/395 (8%)
Query: 260 GKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
G +E I+ +K G++ D L + C + + A+ +H + + +
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++ Y K G ++ + VF + +W M+ GYA +GLG E ++LFE M GL+
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P+ TF + SAC + + E +F M +GI P +HY +V +LG+CG L +A +
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP----------------- 478
I Q +P EP A W AL R+HG+I+L E +++++P
Sbjct: 397 VI-QNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASR 455
Query: 479 SKADPKKIPTPPPK---KRT--AISILDGKSRLVEFRNPTLYRDDEKL-----KALNQMK 528
S D K+ + KRT SI G F + + EK+ + L +++
Sbjct: 456 SWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIR 515
Query: 529 ESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHN 588
++ Y T YVL D+++E KE + HSE+LAIA+GL+ + L I KNLR+CGDCH+
Sbjct: 516 KAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHS 575
Query: 589 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
K++S I R +I+RD KRFHHF DG CSC DYW
Sbjct: 576 TAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ K +H + ++ ++ + N +I MYGK G +T A R+F+ + D + SW+ +I
Sbjct: 154 DAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQ 213
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
NG EG+ F +MR+LG++ +E T LA+ AC
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDEGTILALLQAC 248
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
N +++H +S + D + ++++ Y K G DA ++FD M + + SW+ +I+G++
Sbjct: 57 NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS 116
Query: 355 DNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSAC-GSADAIEEAFIHFESMKSEFGISP 412
L F M+ ++ ++PNE T L++ SAC G+ DA +IH FGI
Sbjct: 117 R--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDA--GKYIH------GFGIKV 166
Query: 413 GTEHYL----GLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
G + L+ + GK G L A + E +P +P W ++
Sbjct: 167 GGTLEVKVANSLINMYGKSGDLTSACRLFEA-IP-DPNTVSWNSI 209
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 196/355 (55%), Gaps = 28/355 (7%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K+VH ++ + + N +I MY KCGS++DA + F ++ ++ SW+ +IN Y+
Sbjct: 671 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 730
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G E L F+QM ++PN T + V SAC +++ +FESM SE+G+SP E
Sbjct: 731 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 790
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY+ +V +L + G L A++FI Q++P +P A W L + +H ++++ + A +++
Sbjct: 791 HYVCVVDMLTRAGLLSRAKEFI-QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 849
Query: 476 LDP----------------SKADPK-----KIPTPPPKKRTAISILDGKSRLVEF----- 509
L+P K D + K+ KK S ++ K+ + F
Sbjct: 850 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 909
Query: 510 RNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 568
+P E + L + E YV D +L+++ E K+ + HSE+LAI++GL+S
Sbjct: 910 NHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSL 969
Query: 569 PARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
PA P+ ++KNLRVC DCH IK +S++ RE+IVRD RFHHF+ G CSC DYW
Sbjct: 970 PATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 266 IELMDKGVKADASCFYTLFELC-GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGK 324
+ ++ + V + F + E C G ++ +++H L +R V+ N +I++Y +
Sbjct: 135 VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR 194
Query: 325 CGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAV 384
G + ARRVFD + + SW MI+G + N E ++LF M LG+ P F +V
Sbjct: 195 NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSV 254
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
SAC +++E + + G S T LV + G+L A+
Sbjct: 255 LSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 306
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
+++D+G+++D C + + +++H S DL N ++ +Y +CG
Sbjct: 541 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 600
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF-LAVF 385
+ ++ F+ +W+ +++G+ +G +E L++F +M + G+ N TF AV
Sbjct: 601 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 660
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ-QFIEQKLPFE 444
+A +A+ + +H ++ ++ G TE L+ + KCG + +A+ QF+E E
Sbjct: 661 AASETANMKQGKQVH--AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 718
Query: 445 PTAEFWEALRNYARIHG 461
+ W A+ N HG
Sbjct: 719 VS---WNAIINAYSKHG 732
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C+ ++ ++ G+ F ++ C + E +++H L+ D + N
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ +Y G++ A +F +M+ R +++ +ING + G G++ ++LF++M GL+P
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 347
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ- 435
+ T ++ AC SAD + ++ G + + L+ + KC + A
Sbjct: 348 DSNTLASLVVAC-SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406
Query: 436 FIEQKLPFEPTAEFWEA----------LRNYARIHGDIDLED 467
F+E ++ W LRN RI + +E+
Sbjct: 407 FLETEV---ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 445
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ + C E +++H +++ + + + + +I+MY K G + A + A +
Sbjct: 455 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 514
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIH 400
+ SW MI GY D+ L F QM G++ +E SAC A++E IH
Sbjct: 515 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 574
Query: 401 FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
++ S G S LV + +CG + E+ EQ + A W AL
Sbjct: 575 AQACVS--GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA--WNAL 623
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ +K+H L+ + + L+ K+ + Y G + A +VFD M +R++ +W+ MI
Sbjct: 62 DEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 121
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC--GSA--DAIEE 396
A L E LF +M + PNE TF V AC GS D +E+
Sbjct: 122 ASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ 168
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 256 LCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q G ++A+EL + G++ D++ +L C +++H Y T +
Sbjct: 324 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY----TTKLG 379
Query: 312 LVLNNKV----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDE---GLQ 364
NNK+ + +Y KC + A F ++ W++M+ Y GL D+ +
Sbjct: 380 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFR 436
Query: 365 LFEQMRKLGLQPNEQTFLAVFSAC---GSADAIEEAFIHFESMKSEF 408
+F QM+ + PN+ T+ ++ C G + E+ IH + +K+ F
Sbjct: 437 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ--IHSQIIKTNF 481
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 195/357 (54%), Gaps = 33/357 (9%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K +HD ++ + ++ + N V+ MY K G++ AR++F M + SW+ MI+ +A +
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQH 585
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEF-GISPGTE 415
G D+ L+ F +M G PN+ TF++V SAC +++ F S+ +F ISP E
Sbjct: 586 GHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAE 645
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V ++ + G L A++FI P +P + +++H D++ + E +++
Sbjct: 646 HYYCMVDLIARAGKLDAAEKFIAAA-PLKPDRVIHSTMLGASKVHKDVERARKSAEHLME 704
Query: 476 LDPSKADPKKIPT---------------------PPPKKRTAISILDGKSRLVEF----- 509
L P ++ + + +K A S + K R+ EF
Sbjct: 705 LTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDT 764
Query: 510 ---RNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 566
R P + E + +M ++ Y PDT +LHD+ E K++ L YHSE+LAIA+GLI
Sbjct: 765 TNARTPEILE--ELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLI 822
Query: 567 STPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
ST T LRIIKNLRVCGDCH A K +S+I GRE++VRD+ RFHHF +G CSCGDYW
Sbjct: 823 STAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDA 331
GVKAD F LC + + +H + ++S I+ D++L+N +++MYG C S DA
Sbjct: 399 GVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDA 458
Query: 332 RRVFDHMADRSMDSWHLMINGYADN-GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
RVF M R SW+ MI YA L E L LF+QM+ G P+ +F+A SAC +
Sbjct: 459 SRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAA 518
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
++ E + + ++ E G+ ++ + K G L A++ K+P P W
Sbjct: 519 QASLAEGKLLHDRIR-ETGLESNMTVANAVLNMYAKSGTLVLARKMF-GKMPL-PDVISW 575
Query: 451 EALRNYARIHGDID 464
+ + HG D
Sbjct: 576 NGMISAFAQHGHAD 589
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 280 FYTLFELC-GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHM 338
F + C +P+ E +++H + + D ++ ++ MYGKC S+ DAR+VFD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
Query: 339 ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA- 397
+ + W+ MI YA ++ +Q+F M G++ TF+ V AC +E A
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 398 FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
+ + E + LV G CG L +A
Sbjct: 222 LVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQA 257
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 246 LPPSVADLARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHD 301
L + A + + Q + EA+EL + +GVK D + C P+ E + +H
Sbjct: 268 LILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHG 327
Query: 302 YFLQSTIRGDLVLN--NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLG 359
+ + IR D +N N +I MYGKCGS+ +A VF M R + SW+ +I + +
Sbjct: 328 FMRE--IRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQH 385
Query: 360 DEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYL 418
E L L M+ G++ ++ +F+ C +++A+ + IH S E GI
Sbjct: 386 PEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIH--SWIVESGIKADVMLDN 443
Query: 419 GLVGVLGKC 427
++ + G C
Sbjct: 444 AILDMYGSC 452
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 29/242 (11%)
Query: 283 LFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS 342
L ++ + + + K+VH +S + + + ++ MY CGS+ DA+ FD M +
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 343 MDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD--AIEEAFIH 400
+W +I + G ++ L LF M+ G+ P + F+AV AC SAD +EE
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGAC-SADPELLEEG--- 119
Query: 401 FESMKSEFGISPGT----EHYLG--LVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALR 454
+ G+ GT +HY+ L+ + GKC + +A++ + + + E+ +
Sbjct: 120 ----RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFD-GIRHKRVVEWNAMIT 174
Query: 455 NYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTL 514
YA+ +DH E+ + + K ++ T I +LD S+L + L
Sbjct: 175 AYAQ-------QDHHEQAIQVFYAMLLEGVK-----AERITFIGVLDACSKLKDLEVAKL 222
Query: 515 YR 516
+
Sbjct: 223 VK 224
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKV--------HDYFLQSTIRGDLVLNNKVI 319
++ +GVKA+ F + + C K E AK V HD+ S+ LV
Sbjct: 192 MLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALV------ 245
Query: 320 EMYGKCGSMTDARRVFD-HMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
YG CG + A R F H + + + MI Y DE L+LF+ M G++ +
Sbjct: 246 NFYGSCGDLEQAFRAFSRHRLELILAT--AMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 379 QTFLAVFSACGSADAIEEA-FIH--FESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+AV +AC +EE IH ++ + ++ G L+ + GKCG L EA +
Sbjct: 304 IACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGN----ALINMYGKCGSLEEAVE 359
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 208/404 (51%), Gaps = 32/404 (7%)
Query: 251 ADLARLCQEGKVKEAIEL-MDK---GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A +A + G+ +EAI+L MD G K D C N E ++H +++
Sbjct: 521 AIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN 580
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ D + N ++MYGKCG M + A R W+ +I+GYA G E F
Sbjct: 581 GLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTF 640
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+ M +G +P+ TF+A+ SAC A I++ ++ SM FG+SPG +H + +V +LG+
Sbjct: 641 KHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGR 700
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK------ 480
G EA++FI++ +P P W +L + +R H ++D+ A + +++LDP
Sbjct: 701 LGKFAEAEKFIDE-MPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVL 759
Query: 481 -----------ADPKKI----PTPPPKKRTAISILDGKSRLVEFR-NPTLYRDDEKL--- 521
D K+ T KR A S L K+ + F + EK+
Sbjct: 760 LSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVK 819
Query: 522 --KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKN 579
+ L +++E YV DT LHD D+E KE L HSE+LA+AYGL+ P + +RI KN
Sbjct: 820 LDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKN 879
Query: 580 LRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LRVC DCH K++S + RE+++RD RFH FK G CSC D+W
Sbjct: 880 LRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 258 QEGKVKEAIELMDKGVKAD-----ASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q EA+E + + ++ D + F + C +P+ N + +H LQ +++ L
Sbjct: 324 QSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVL 383
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
++ N ++ MY KC SM D RVF+ M + S +++ GYA +++F MR
Sbjct: 384 LIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT 443
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYL--GLVGVLGKCGHL 430
G++PN T + + C S + + + ++ G+ ++ Y+ L+ + CG L
Sbjct: 444 GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL--SDEYITNSLITMYATCGDL 501
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 251 ADLARLCQEGKVKEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A + L G ++EA+ + +GV +A+ T+ LCG + +V + + S
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVS 174
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
+ + + N +I M+G + DA R+FD M +R SW+ MI+ Y+ + + +
Sbjct: 175 GLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVL 234
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAI 394
MR ++P+ T ++ S C S+D +
Sbjct: 235 SDMRHGEVKPDVTTLCSLVSVCASSDLV 262
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 248 PSVADLARLCQEGKVKEAIELM-DKGVKADASCFYTLFELCGNPKWYENAK---KVHDYF 303
+V+ AR E + +M ++ V +L C + W E A +H
Sbjct: 11 TAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALT 70
Query: 304 LQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGL 363
++ + G++ + ++ +YG G + +A+R+F M R++ SW ++ + NG +E L
Sbjct: 71 HRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEAL 130
Query: 364 QLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
+ +MRK G+ N V S CG+ +
Sbjct: 131 VAYRRMRKEGVMCNANALATVVSLCGALE 159
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
VK D + +L +C + +H + S + + L N ++ MY G + +A
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAE 301
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ-----PNEQTFLAVFSA 387
+F +M+ R + SW+ MI+ Y + E L+ Q+ LQ PN TF + A
Sbjct: 302 SLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL----LQTDEGPPNSMTFSSALGA 357
Query: 388 CGSADAI 394
C S +A+
Sbjct: 358 CSSPEAL 364
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 299 VHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
+H Y Q+ + D + N +I MY CG + + +F + ++S+ SW+ +I +G
Sbjct: 472 LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGR 531
Query: 359 GDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHY 417
G+E ++LF + G + + S+ + ++EE +H S+K+ G+ +
Sbjct: 532 GEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN--GLDCDSHVV 589
Query: 418 LGLVGVLGKCGHL 430
+ + GKCG +
Sbjct: 590 NATMDMYGKCGKM 602
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 198/369 (53%), Gaps = 45/369 (12%)
Query: 282 TLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADR 341
++ C E + +H + +++ + + + + +++MYGKCG + D+ + FD M ++
Sbjct: 237 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 296
Query: 342 SMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHF 401
++ + + +I GYA G D L LFE+M G CG A+E F
Sbjct: 297 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRG--------------CG---AVENGMKIF 339
Query: 402 ESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
+SM+S +GI PG EHY +V +LG+ G + A +FI +K+P +PT W AL+N R+HG
Sbjct: 340 DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI-KKMPIQPTISVWGALQNACRMHG 398
Query: 462 DIDLEDHAEELMVDLDPSKAD---------------------PKKIPTPPPKKRTAISIL 500
L A E + LDP + +++ KK S +
Sbjct: 399 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 458
Query: 501 DGKSRLVEF----RNPTLYRDDEKL--KALNQMKESTYVPDTRYVLHDIDQEAKEQALLY 554
K+++ F R+ L ++ + K N+M+ + Y PD + L+D+++E K + +
Sbjct: 459 TVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 518
Query: 555 HSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKD 614
HSE+LA+A+GL+S P P+RI KNLR+CGDCH+ K +S V RE+IVRDN RFH FKD
Sbjct: 519 HSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 578
Query: 615 GKCSCGDYW 623
G CSC DYW
Sbjct: 579 GICSCKDYW 587
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
K++H ++ D+ + +MY K DAR++FD + +R++++W+ I+
Sbjct: 62 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 121
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
+G E ++ F + R++ PN TF A +AC
Sbjct: 122 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 155
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 200/359 (55%), Gaps = 38/359 (10%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRS-MDSWHLMINGYAD 355
K +H Y L+ + + N ++ MY KCG + R +FD + R + SW+ +I+GY
Sbjct: 308 KLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGM 367
Query: 356 NGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTE 415
+G G E +Q+FE M ++G+ PN TF++V AC A ++E FESM ++ ++P E
Sbjct: 368 HGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESM-VDYNVTPRAE 426
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVD 475
HY +V +LG+ GHL EA + I Q + P+ + W +L RIH ++ + A + D
Sbjct: 427 HYACMVDLLGRAGHLDEAVELI-QGMHIRPSPQVWGSLLGACRIHRHVEYAEMACSQLFD 485
Query: 476 LDPSKAD---------------------PKKIPTPPPKKRTAISILDGKSRL-----VEF 509
L+P A + +K S ++ K RL V+
Sbjct: 486 LEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMFVSVDN 545
Query: 510 RNPTLYRDDEKLKAL-----NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 564
+NP + E+L+AL QMK YVPDT VL+DI++E KE+ LL HSE+LA+A+G
Sbjct: 546 KNPQI----EELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAFG 601
Query: 565 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
LI+T +RI KNLR+C DCH+ K +S+ RE+IVRD RFHHF+DG CSCGDYW
Sbjct: 602 LINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW 660
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL- 372
+ +I+ Y K G ++ A VF M +R++ SW MI YA N + + LF++M
Sbjct: 222 VATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASD 281
Query: 373 -GLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
L PN T + + A +A+ + +H ++ F + L+ + KCG L
Sbjct: 282 EDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLN--ALMAMYMKCGCL 339
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
EA + I + W L + +HG
Sbjct: 340 -EAGRHIFDLIGHRKDVVSWNTLISGYGMHG 369
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 194/364 (53%), Gaps = 28/364 (7%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C E + VHDY ++ + LNN +I+M+ KCG + A+R+FD M+ + + SW
Sbjct: 292 CAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISW 351
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ M+NG A +GLG E L F M+ LQP+E TF+ V +AC A ++E F +++
Sbjct: 352 NSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA 411
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+G+ +EHY +V +L + G L EA++FI + +P +P W ++ R++ +++L
Sbjct: 412 LYGVRLKSEHYGCMVDLLCRAGLLAEAREFI-RVMPLQPDGAIWGSMLGACRVYNNLELG 470
Query: 467 DHAEELMVDLDPSK--------------------------ADPKKIPTPPPKKRTAISIL 500
+ A +++L+P+ + K I P I +
Sbjct: 471 EEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNI 530
Query: 501 DGKSRLVEFRNPTLYRDDEKLKALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERL 559
+ +P + L+ + + +K YV DT VL +ID KE+++ HSE+L
Sbjct: 531 AHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKL 590
Query: 560 AIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 619
A+ YGL+ + + I+KNLRVC DCH IK++S+I R++ +RD RFHHFKDG CSC
Sbjct: 591 ALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSC 650
Query: 620 GDYW 623
DYW
Sbjct: 651 RDYW 654
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 270 DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+ G D TL C K K+H + + ++ VL + ++ MY KCG +
Sbjct: 173 EDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLK 232
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR-KLGLQPNEQTFLAVFSAC 388
AR+VFD ++D+ + +W +I GY N E LQLF ++ ++PNE T LAV SAC
Sbjct: 233 TARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISAC 292
Query: 389 GSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTA 447
+E ++H +++ G S + L+ + KCG + +A + I + ++
Sbjct: 293 AQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGDI-DAAKRIFDSMSYKDLI 349
Query: 448 EFWEALRNYARIHG 461
W ++ N +HG
Sbjct: 350 S-WNSMVNGLALHG 362
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVF 335
D F +L + C ++ K +H ++ + DL + ++ MY CG + AR +F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 336 DHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIE 395
+ M R+ W MI+GY N +E L L+++M + G P+E T + SAC +
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197
Query: 396 EAF---IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
H M + G+ LV + KCG L A+Q +Q + A W A
Sbjct: 198 VGMKLHSHIREMDMKICAVLGS----ALVNMYAKCGDLKTARQVFDQLSDKDVYA--WSA 251
Query: 453 L 453
L
Sbjct: 252 L 252
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 214/402 (53%), Gaps = 41/402 (10%)
Query: 258 QEGKVKEAIE----LMDKG-VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
Q G KEAIE +M G V + ++ E K VH Y ++ IR D
Sbjct: 242 QNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDD 301
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
VL + +++MY KCGS+ A +VF+ + ++ +W+ +I G A +G ++ +M K
Sbjct: 302 VLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKC 361
Query: 373 GLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
G+ P++ T++A+ SAC A ++E F M + G+ P EHY +V +LG+ G+L E
Sbjct: 362 GISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEE 421
Query: 433 AQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP-------------- 478
A++ I +P +P W+AL +++H +I + A E+++ + P
Sbjct: 422 AEELI-LNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYA 480
Query: 479 -------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL------- 524
A + +K S ++ + EF L DD +A
Sbjct: 481 SSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEF----LVEDDSHSRAKDIHSMLE 536
Query: 525 ---NQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
N++ ++PDT VL +D++ KE L YHSE++A+A+GLISTP +TPL I+KNLR
Sbjct: 537 EISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLR 596
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+C DCH+++K++S++ R++++RD KRFHHF+ G CSC DYW
Sbjct: 597 ICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 40/263 (15%)
Query: 217 QQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKAD 276
Q +S PNQ P+ + C A +ARL EGK + L+ G+ D
Sbjct: 106 QMLSEATVEPNQFT-FPSVLKAC-----------AVMARL-AEGKQVHGL-LLKFGLVDD 151
Query: 277 ---ASCFYTLFELCG-----NPKWYENAKKVHDYFLQSTIRGD------LVLNNKVIEMY 322
+ ++ +CG N +Y N + V D +++ +R + +VL N +++ Y
Sbjct: 152 EFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDD--VRNLVRDERGREFNVVLCNVMVDGY 209
Query: 323 GKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG-LQPNEQTF 381
+ G++ AR +FD MA RS+ SW++MI+GYA NG E +++F +M ++G + PN T
Sbjct: 210 ARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTL 269
Query: 382 LAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFEAQQFIE 438
++V A +E ++H + K++ I + LG LV + KCG + +A Q E
Sbjct: 270 VSVLPAISRLGVLELGKWVHLYAEKNKIRI----DDVLGSALVDMYAKCGSIEKAIQVFE 325
Query: 439 QKLPFEPTAEFWEALRNYARIHG 461
+LP + W A+ +HG
Sbjct: 326 -RLP-QNNVITWNAVIGGLAMHG 346
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 207/399 (51%), Gaps = 32/399 (8%)
Query: 256 LCQEGKVKEAIELMDKGVKADA----SCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L + G+ A+E+ + D + C + + V Y + I +
Sbjct: 224 LVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELN 283
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ +I MY +CG + +A+RVF+ M ++++ +++ MI G+A +G E ++LF + K
Sbjct: 284 HFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIK 343
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLF 431
G P+ TF+ V +AC E F F SM ++GI P EHY +V +LG+ G L
Sbjct: 344 QGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLE 403
Query: 432 EAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA---------- 481
EA FI + + P AL + +IHG+++L + + +V + +
Sbjct: 404 EAYSFI-RMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAY 462
Query: 482 -------DPKKIPT----PPPKKRTAISILDGKSRLVEF-----RNPTLYRDDEKLKALN 525
+ ++ T +K S ++ + + EF R+P + +KL+ LN
Sbjct: 463 SSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELN 522
Query: 526 Q-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCG 584
Q ++ Y P T VLHDI++ KE AL HSERLAI YGLIST T LR++KNLRVC
Sbjct: 523 QILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCN 582
Query: 585 DCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
DCH IK++S I R+++VRD RFHHF++G CSCGDYW
Sbjct: 583 DCHLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 25/194 (12%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++++ + D+ ++ + CG + ++VH L+ + + + K+IE+YGKCG
Sbjct: 120 QMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCG 179
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGD------------------EGLQLFEQ 368
+ DARRVFD M +R + + +MIN Y D+G+ D L++F
Sbjct: 180 AFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRN 239
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTEHYLG--LVGVLG 425
M++ + PNE T + V SAC A++ ++ K ++ H++G L+ +
Sbjct: 240 MQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELN----HFVGGALINMYS 295
Query: 426 KCGHLFEAQQFIEQ 439
+CG + EAQ+ EQ
Sbjct: 296 RCGDIDEAQRVFEQ 309
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 318 VIEMYGKCGSMTD---ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
V E+ C ++ A ++F H + ++ + +I+G + +G+ L+ QM L
Sbjct: 67 VFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSL 126
Query: 375 QPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
P+ +V ACG A++E +H + +K G+S + L+ + GKCG +A
Sbjct: 127 VPDSYAVTSVLKACGCHLALKEGREVHSQVLK--LGLSSNRSIRIKLIELYGKCGAFEDA 184
Query: 434 QQFIEQ 439
++ ++
Sbjct: 185 RRVFDE 190
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 210/402 (52%), Gaps = 52/402 (12%)
Query: 263 KEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
KEA++L +++G+K D C+ + LC + A ++ D+ + I G+ L+N V
Sbjct: 292 KEALDLFFKMLNEGLKPD--CYAMVGVLCSCARL--GALELGDW-ASNLINGNEFLDNSV 346
Query: 319 -----IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
I+MY KCG M A VF M + W+ I+G A +G + L LF QM K G
Sbjct: 347 LGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSG 406
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ TF+ + AC A +EE +F SM+ F ++P EHY +V +LG+ G L EA
Sbjct: 407 IKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEA 466
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP--------------- 478
Q I + +P E A W AL R+H D L + + ++ L+P
Sbjct: 467 HQLI-KSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAA 525
Query: 479 --------------SKADPKKIPTPPPKKRTAIS--ILDGKSRLVEFRNPTLYRDDEKLK 522
S+ KKIP + + L G + +P + KL
Sbjct: 526 SHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTS-----HPLSEKIYAKLG 580
Query: 523 ALNQ-MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR 581
L + +K + YVP T +VL DI++E KE + HSE+LA+A+GLIST + ++KNLR
Sbjct: 581 ELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLR 640
Query: 582 VCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
VCGDCH AIK +SRI GRE+IVRDN RFH F DG CSC DYW
Sbjct: 641 VCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 260 GKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLN 315
GK +EAI+ L++ G++ D+ + C + + + +Y ++ + ++ +
Sbjct: 188 GKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVA 247
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+++ YGKCG+M AR VFD M ++++ SW MI GYA NGL E L LF +M GL+
Sbjct: 248 TALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLK 307
Query: 376 PNEQTFLAVFSACGSADAIE 395
P+ + V +C A+E
Sbjct: 308 PDCYAMVGVLCSCARLGALE 327
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 263 KEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKV 318
+E+IE+ +G+ D+ F + + C E K+H +++ D + +
Sbjct: 90 QESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISL 149
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
I +Y KCG + +A +VFD + D++ SW I+GY G E + +F ++ ++GL+P+
Sbjct: 150 INLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDS 209
Query: 379 QTFLAVFSACG------SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
+ + V SAC S + I+E +E G+ LV GKCG++
Sbjct: 210 FSLVEVLSACKRTGDLRSGEWIDEYI-------TENGMVRNVFVATALVDFYGKCGNMER 262
Query: 433 AQQFIEQKL 441
A+ + L
Sbjct: 263 ARSVFDGML 271
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
K +H L+ + D L NKV+ G+ + R+ D + ++ ++ MI G N
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
E ++++ MRK GL P+ TF V AC E + S+ + G
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV-LDSELGVKMHSLVVKAGCEADAFV 145
Query: 417 YLGLVGVLGKCGHL 430
+ L+ + KCG +
Sbjct: 146 KISLINLYTKCGFI 159
>gi|5262157|emb|CAB45786.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7267600|emb|CAB80912.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 500
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 209/389 (53%), Gaps = 28/389 (7%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K I++ ++GV +A+ TL ++ G + K+VH + L+ + D + +++M
Sbjct: 113 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 172
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
YGK G + A +F + ++S+ SW+ M+ GYA G G+EG+ F M + G++P+ TF
Sbjct: 173 YGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 232
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+V S C ++ ++E + +F+ M+S +GI P EH +V +LG+ G+L EA FI Q +
Sbjct: 233 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI-QTM 291
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPK 484
+P A W A + +IH D++L + A + + L+P + D +
Sbjct: 292 SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVE 351
Query: 485 KIPTPPPKKRTAISILDGKSRL-----VEFRNPTLYRDD-----EKLKALNQMKESTYVP 534
+I R + L ++ + + + D+ E K +++MK+S YVP
Sbjct: 352 RIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVP 411
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
DT + DI KE+ L+ H+E+LA+ YGLI P+R++KN +C D H K MS
Sbjct: 412 DTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMS 471
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ RE+++++ R HHF+DGKCSC D W
Sbjct: 472 VLRNREIVLQEGARVHHFRDGKCSCNDSW 500
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 36/140 (25%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWH-----------------LMI------------- 350
MY K G + AR VFD M +++ +W+ LMI
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 351 -----NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMK 405
+GYA G ++ L + +M++ G+ PN ++ A+FS C A F M+
Sbjct: 61 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 120
Query: 406 SEFGISPGTEHYLGLVGVLG 425
E G+ P L+ +LG
Sbjct: 121 EE-GVGPNAATMSTLLKILG 139
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 206/406 (50%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A LA G +E ++L+ K GV D F E +++H ++
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 594
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + N +MY KCG + + ++ +RS+ SW+++I+ +G +E F
Sbjct: 595 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 654
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M ++G++P TF+++ +AC +++ +++ + +FG+ P EH + ++ +LG+
Sbjct: 655 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 714
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--- 483
G L EA+ FI K+P +P W +L +IHG++D A E + L+P
Sbjct: 715 SGRLAEAETFI-SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 773
Query: 484 ------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRD 517
K++ KK+ A S + K ++ F + +Y
Sbjct: 774 SSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAK 833
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
E +K L +KES YV DT L D D+E KE L HSERLA+AY L+STP + +RI
Sbjct: 834 LEDIKKL--IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 891
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH+ K +SR++GR +++RD RFHHF+ G CSC DYW
Sbjct: 892 KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFE----LCGNPKWY 293
Q P D + S+ +A +G+ +A+ L+ + + S Y F C P ++
Sbjct: 321 QMPTKDLISWNSL--MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
E + +H + S + + ++ N ++ MYGK G M+++RRV M R + +W+ +I GY
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A++ D+ L F+ MR G+ N T ++V SAC
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCG-NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++ D G+K + +L CG + + +VH + +S + D+ ++ ++ +YG
Sbjct: 48 KMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVY 107
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G ++ +R+VF+ M DR++ SW ++ GY+D G +E + +++ MR G+ NE + V
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 386 SACG 389
S+CG
Sbjct: 168 SSCG 171
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 271 KGVKADASCFYTLFELCGNP-KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+GV ++ ++ C P E K +H Y + + D + N +I MY KCG ++
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
++ +F+ + +R++ +W+ M+ A +G G+E L+L +MR G+ ++ +F SA
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 390 SADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
+EE + + G + + + KCG + E + +
Sbjct: 577 KLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 321 MYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQT 380
MY K G + AR +FD M R+ SW+ M++G GL EG++ F +M LG++P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 381 FLAVFSACGSADAI------EEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFE 432
++ +ACG + ++ F+ + S+ +S H G+ G++ +FE
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV + + + CG K +++ ++S + L + N +I M G G++
Sbjct: 154 EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 213
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +FD M++R SW+ + YA NG +E ++F MR+ + N T + S G
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 391 AD 392
D
Sbjct: 274 VD 275
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+ +++ TL + G+ + + +H ++ + + N ++ MY G +A
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF M + + SW+ ++ + ++G + L L M G N TF + +AC + D
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEAL 453
E+ I + G+ LV + GK G + E+++ + Q + A W AL
Sbjct: 378 FEKGRI-LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA--WNAL 434
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 30/347 (8%)
Query: 305 QSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQ 364
+S ++G++++ N +I MY K G + A+ VF +M ++ +W+ +I G++ +GLG E L
Sbjct: 353 KSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALS 412
Query: 365 LFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVL 424
+F+ M G +PN TF+ V AC ++E F +F + +F I PG EHY +VG+L
Sbjct: 413 MFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLL 472
Query: 425 GKCGHLFEAQQFI-EQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP 483
+ G L EA+ F+ ++ ++ + W L N +H D E ++ L+P
Sbjct: 473 SRSGRLDEAENFMRSHQINWDVVS--WRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGT 530
Query: 484 ---------------------KKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKL- 521
K + KK +S L+ ++ F + + + L
Sbjct: 531 YILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLI 590
Query: 522 -----KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 576
L++++ YVPD VLHDI+ E K L YHSE+LA+AYGL+ TP+ P+ +
Sbjct: 591 YENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITV 650
Query: 577 IKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
IKNLR+C DCH AIK++S++ R ++VRD RFHHF++G CSCGDYW
Sbjct: 651 IKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 256 LCQEGKVKEAIE----LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGD 311
L Q + EA++ ++ +G++ + + + T+F LC + K K+VH L+S I D
Sbjct: 199 LLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCD 258
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+ + + +I+MYGKCG++ R FD + R++ SW +I Y N +E L LF +M
Sbjct: 259 VYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEI 318
Query: 372 LGLQPNEQTFLAVFSACGSADAI 394
+ PNE T +F++ A+
Sbjct: 319 DCIPPNEYTMAVLFNSAAGLSAL 341
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 251 ADLARLCQEGKVKEAIELMDKGVKAD-----ASCFYTLFELCGNPKWYENAKKVHDYFLQ 305
A +A Q G E EL K V D T C + + Y K+ H Y L+
Sbjct: 93 ALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGKQCHGYALK 151
Query: 306 STIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQL 365
S + + N +I++Y KC + A ++ + + ++L++NG + E + +
Sbjct: 152 SGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDV 211
Query: 366 FEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVG 422
+ + G++ N T++ +F C S I +H + +KS+ + Y+G ++
Sbjct: 212 LKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDI----DCDVYIGSSIID 267
Query: 423 VLGKCGHLFEAQQFIEQ 439
+ GKCG++ + F ++
Sbjct: 268 MYGKCGNVLSGRTFFDR 284
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM-RKLGL 374
N +I +Y KC ++ AR++FD M R++ SW ++ GY NG E +LF++M K +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 375 QPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQ 434
PNE S+C S +E H ++KS ++ L+ + KC + A
Sbjct: 121 FPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKN--ALIQLYSKCSDVGAAI 178
Query: 435 QFI 437
Q +
Sbjct: 179 QIL 181
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 206/406 (50%), Gaps = 36/406 (8%)
Query: 251 ADLARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQS 306
A LA G +E ++L+ K G+ D F E +++H ++
Sbjct: 636 AILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 695
Query: 307 TIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLF 366
D + N +MY KCG + + ++ +RS+ SW+++I+ +G +E + F
Sbjct: 696 GFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETF 755
Query: 367 EQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGK 426
+M ++G++P TF+++ +AC +++ +++ + +FG+ P EH + ++ +LG+
Sbjct: 756 HEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGR 815
Query: 427 CGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADP--- 483
G L EA+ FI K+P +P W +L +IH D+D A E + L+P
Sbjct: 816 SGRLAEAETFI-SKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVL 874
Query: 484 ------------------KKIPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRD 517
K++ KK+ A S + K ++ F + +Y
Sbjct: 875 SSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAK 934
Query: 518 DEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 577
E +K L +KES YV DT L D D+E KE L HSERLA+AY L+STP + +RI
Sbjct: 935 LEDIKKL--IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 992
Query: 578 KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
KNLR+C DCH+ K +SR++GR +++RD RFHHF+ G CSC DYW
Sbjct: 993 KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 238 QCPAGDQVLPPSVADLARLCQEGKVKEAIELMDKGVKADASCFYTLFE----LCGNPKWY 293
Q P D + S+ +A +G+ +A+ ++ ++ S Y F C +P+++
Sbjct: 422 QMPTKDLISWNSL--MASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFF 479
Query: 294 ENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGY 353
+ + +H + S + + ++ N ++ MYGK G M+ +RRV M R + +W+ +I GY
Sbjct: 480 DKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGY 539
Query: 354 ADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSAC 388
A+N D+ L F+ +R G+ N T ++V SAC
Sbjct: 540 AENEDPDKALAAFQTLRVEGVSANYITVVSVLSAC 574
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Query: 267 ELMDKGVKADASCFYTLFELCG-NPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
++ D G+K + +L CG + + +VH + +S + D+ ++ ++ +YG
Sbjct: 149 KMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVY 208
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
G ++ +R+VF+ M DR++ SW ++ GY+D G +E + +++ MR G++ NE + V
Sbjct: 209 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVI 268
Query: 386 SACG 389
S+CG
Sbjct: 269 SSCG 272
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+ +H ++ +R ++ N +I MY K G + AR +FD M R+ SW+ M++G
Sbjct: 76 TGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI------EEAFIHFESMKSEF 408
GL EG++ F++M LG++P+ ++ +ACG + ++ F+ + S+
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195
Query: 409 GISPGTEHYLGLVGVLGKCGHLFE 432
+S H G+ G++ +FE
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFE 219
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 271 KGVKADASCFYTLFELCGNP-KWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT 329
+GV A+ ++ C P E K +H Y + + D + N +I MY KCG ++
Sbjct: 558 EGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 617
Query: 330 DARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
++ +F+ + +RS+ +W+ ++ A +G G+E L+L +MR GL ++ +F SA
Sbjct: 618 SSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAA 677
Query: 390 SADAIEEA 397
+EE
Sbjct: 678 KLAVLEEG 685
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
+GV+ + + + CG K +++ ++S + L + N +I M+G G++
Sbjct: 255 EGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDY 314
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F+ +++R SW+ ++ YA NG +E ++F MR+ + N T + S G
Sbjct: 315 ANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGD 374
Query: 391 AD 392
D
Sbjct: 375 VD 376
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 57/126 (45%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
+ +++ TL + G+ + + +H ++ + + N ++ MY G +A
Sbjct: 359 EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADL 418
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VF M + + SW+ ++ + ++G + L + M + G N TF + +AC S +
Sbjct: 419 VFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF 478
Query: 394 IEEAFI 399
++ I
Sbjct: 479 FDKGRI 484
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 209/389 (53%), Gaps = 28/389 (7%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K I++ ++GV +A+ TL ++ G + K+VH + L+ + D + +++M
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 440
Query: 322 YGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTF 381
YGK G + A +F + ++S+ SW+ M+ GYA G G+EG+ F M + G++P+ TF
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 500
Query: 382 LAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+V S C ++ ++E + +F+ M+S +GI P EH +V +LG+ G+L EA FI Q +
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI-QTM 559
Query: 442 PFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPK 484
+P A W A + +IH D++L + A + + L+P + D +
Sbjct: 560 SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVE 619
Query: 485 KIPTPPPKKRTAISILDGKSRL-----VEFRNPTLYRDD-----EKLKALNQMKESTYVP 534
+I R + L ++ + + + D+ E K +++MK+S YVP
Sbjct: 620 RIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVP 679
Query: 535 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 594
DT + DI KE+ L+ H+E+LA+ YGLI P+R++KN +C D H K MS
Sbjct: 680 DTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMS 739
Query: 595 RIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ RE+++++ R HHF+DGKCSC D W
Sbjct: 740 VLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
+ G ++A+EL + G KA S L ++C N + + +++H Y L+ + ++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
+ N +I MY + G + +R+VF+ M DR++ SW+ +++ Y G D+ + L ++M G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
L+P+ T+ ++ S S ++A + M+ G+ P T L+ + + GHL
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 253 LARLCQEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
L+ +G K+AI ++ + G+K S +L + P + K +H Y L++ +
Sbjct: 197 LSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL 256
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH-----------------LMI- 350
D+ + +I+MY K G + AR VFD M +++ +W+ LMI
Sbjct: 257 WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIR 316
Query: 351 -----------------NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
+GYA G ++ L + +M++ G+ PN ++ A+FS C
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 394 IEEAFIHFESMKSEFGISPGTEHYLGLVGVLG 425
A F M+ E G+ P L+ +LG
Sbjct: 377 FRNALKVFIKMQEE-GVGPNAATMSTLLKILG 407
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 303 FLQSTIRGDLV---LNN---KVIE----MYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
FL TI G L+ L+N +V+ YG+C S+ A ++FD M R +W+ ++
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+G ++ ++LF +M+ G + + T + + C + + E
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG 108
>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 654
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 219/426 (51%), Gaps = 34/426 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQE--GKVKEAIELMDKGVKADASCFYTLFEL 286
L + +Q + D ++ S+ C+E G + ++ + +K + T+F +
Sbjct: 232 LEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSV 291
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG E K+VH + L+S D + N ++ MY CG + DA++VF ++ S+
Sbjct: 292 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 351
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI+ +G E L+ F QM+ GL P+E T L + S+ A + E F SM
Sbjct: 352 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 411
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
GI P +HY +V +L + G + +A + I + +PFE A W + H DI+
Sbjct: 412 IEGIKPMYQHYACVVDMLARSGEIGKAMKTINE-MPFEAEAPLWRIVLGACSKHRDIETG 470
Query: 467 DHAEELMVDLDPSKA-----------------DPKKIPTPPPK----KRTAISILDGKSR 505
E++ +++P +A + +K+ + + K A S ++ R
Sbjct: 471 KRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQR 530
Query: 506 LVEF-----RNPT---LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
F +P +YR+ ++L ++ +K + YVPD + H+I ++ KE++L YH E
Sbjct: 531 TYRFGVDDRSHPISREIYRNLDRL--ISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCE 588
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LA A+G ++ P+ LRI+KNLRVCGDCH A K S + GRE+I+RDN+RFHHF G C
Sbjct: 589 KLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFC 648
Query: 618 SCGDYW 623
SCGDYW
Sbjct: 649 SCGDYW 654
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 305 QSTIRGDL------VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
Q+ +RG L +L V+ Y C AR+VFD M R+ +W+ +I GYA G
Sbjct: 96 QAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGR 155
Query: 359 GDEGLQLFEQMRKLG--LQPNEQTFLAVFSACG 389
+E + LF M++ G + P+ TF A+ S G
Sbjct: 156 REEAILLFRDMKREGSHVAPDRYTFPALLSGIG 188
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 288 GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH 347
G+ + E +H + +++ + D + ++ +Y ++ DA+ FD + W
Sbjct: 192 GSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWS 251
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
MI+ Y + + L +F M ++P + + VFS CG +E +H S+KS
Sbjct: 252 SMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKS 311
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ L+ + CG + +AQ+
Sbjct: 312 N--TEKDAAMFNALLTMYSDCGCINDAQK 338
>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
Length = 653
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 219/426 (51%), Gaps = 34/426 (7%)
Query: 229 LNNVPNNMNQCPAGDQVLPPSVADLARLCQE--GKVKEAIELMDKGVKADASCFYTLFEL 286
L + +Q + D ++ S+ C+E G + ++ + +K + T+F +
Sbjct: 231 LEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSV 290
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
CG E K+VH + L+S D + N ++ MY CG + DA++VF ++ S+
Sbjct: 291 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 350
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
+ MI+ +G E L+ F QM+ GL P+E T L + S+ A + E F SM
Sbjct: 351 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 410
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
GI P +HY +V +L + G + +A + I + +PFE A W + H DI+
Sbjct: 411 IEGIKPMYQHYACVVDMLARSGEIGKAMKTINE-MPFEAEAPLWRIVLGACSKHRDIETG 469
Query: 467 DHAEELMVDLDPSKA-----------------DPKKIPTPPPK----KRTAISILDGKSR 505
E++ +++P +A + +K+ + + K A S ++ R
Sbjct: 470 KRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQR 529
Query: 506 LVEF-----RNPT---LYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSE 557
F +P +YR+ ++L ++ +K + YVPD + H+I ++ KE++L YH E
Sbjct: 530 TYRFGVDDRSHPISREIYRNLDRL--ISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCE 587
Query: 558 RLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 617
+LA A+G ++ P+ LRI+KNLRVCGDCH A K S + GRE+I+RDN+RFHHF G C
Sbjct: 588 KLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFC 647
Query: 618 SCGDYW 623
SCGDYW
Sbjct: 648 SCGDYW 653
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 305 QSTIRGDL------VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGL 358
Q+ +RG L +L V+ Y C AR+VFD M R+ +W+ +I GYA G
Sbjct: 95 QAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGR 154
Query: 359 GDEGLQLFEQMRKLG--LQPNEQTFLAVFSACG 389
+E + LF M++ G + P+ TF A+ S G
Sbjct: 155 REEAILLFRDMKREGSHVAPDRYTFPALLSGIG 187
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 288 GNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWH 347
G+ + E +H + +++ + D + ++ +Y ++ DA+ FD + W
Sbjct: 191 GSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWS 250
Query: 348 LMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAF-IHFESMKS 406
MI+ Y + + L +F M ++P + + VFS CG +E +H S+KS
Sbjct: 251 SMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKS 310
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
+ L+ + CG + +AQ+
Sbjct: 311 N--TEKDAAMFNALLTMYSDCGCINDAQK 337
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 207/401 (51%), Gaps = 37/401 (9%)
Query: 258 QEGKVKEAIELMDK----GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG--- 310
+ G+ EA+ + D+ G K DA ++ + C + E + VH + + G
Sbjct: 192 RTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFLKAERLGGRPG 251
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
+++L +++MY KCG M +A VFD + + W+ MI G A NG G L+LF +M
Sbjct: 252 NVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRML 311
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
G PNE TF+ AC ++E F SM+ + GI P EHY L +LG+ G L
Sbjct: 312 DKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMR-DHGIEPRREHYGCLADLLGRAGLL 370
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDP------------ 478
EA+ + +P EP A W AL + +H ++ + + + +++L+P
Sbjct: 371 EEAEGVL-LDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVALFNL 429
Query: 479 ---------SKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKL--KALNQM 527
+KA K + KK T +S ++ + EFR+ +L L M
Sbjct: 430 YAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRLIYALLEDM 489
Query: 528 KEST----YVPDTRYVLHDID-QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRV 582
++ YV DT VL D+D +E K L YHSERLA+A+G+++ P P+RI+KNLRV
Sbjct: 490 EQRLQLIGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALAFGILNIPHDMPIRIVKNLRV 549
Query: 583 CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
C DCH K++S++ RE+IVRD RFH F+DG CSC D+W
Sbjct: 550 CRDCHVHAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDFW 590
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 295 NAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYA 354
+A++V D + + D+V N ++ YGKCG + AR VF M +R + SW MI+
Sbjct: 134 DARRVFDTSGATAL--DVVSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACV 191
Query: 355 DNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSE-FGISPG 413
G E L++F+QM G +P+ ++V C A+E +K+E G PG
Sbjct: 192 RTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFLKAERLGGRPG 251
Query: 414 TEHY-LGLVGVLGKCGHLFEA 433
LV + KCG + EA
Sbjct: 252 NVMLETALVDMYCKCGCMNEA 272
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMD--SWHLMINGYADNGLGDEGLQLFEQMR 370
V+ N ++++Y G + DARRVFD ++D SW+ M++GY G + ++F +M
Sbjct: 117 VVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAAREVFVRMP 176
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ GL ++ A+ AC EA F+ M G P + LV VL C HL
Sbjct: 177 ERGL----VSWSAMIDACVRTGEFSEALRVFDQMTGN-GFKPDA---VVLVSVLKTCAHL 228
Query: 431 --FEAQQFIEQKLPFE 444
E +++ + L E
Sbjct: 229 GALERGRWVHRFLKAE 244
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 205/386 (53%), Gaps = 32/386 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ GV+AD + + E A+ V + + I + L N +I+ KCG
Sbjct: 220 EMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCG 279
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A VF+ M RS+ SW +I+ A G G E +++FE+M+ G+ P++ F+ V +
Sbjct: 280 DVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLT 339
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
AC A ++E +F++MK E+GI P EHY +V + G+ G + A +F+ + +P +P
Sbjct: 340 ACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFV-RTMPIQPN 398
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPS--------------------KADPKK- 485
W +L + R HG ++L + ++ P+ K++ ++
Sbjct: 399 PVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRRE 458
Query: 486 IPTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQMKESTYVPDTR 537
+ KK SI++ + EF + +YR E++ +++ ++ T
Sbjct: 459 MSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMA--RELRRVGHIAATS 516
Query: 538 YVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIV 597
VL D+D+E KE AL +HSE+LAIA+ L+ TP T +R++KNLRVC DCH AIK +S++
Sbjct: 517 EVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 576
Query: 598 GRELIVRDNKRFHHFKDGKCSCGDYW 623
RE++VRD RFH FKDG CSC D+W
Sbjct: 577 RREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 300 HDYFLQSTIRGDLVLNNKVIEMYGKCGS--MTDARRVFDHMADRSMDSWHLMINGYADNG 357
H L+ D ++N +I MY G + DAR VFD M S +W MI GY G
Sbjct: 150 HAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGG 209
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
L + + LF +M+ G+Q +E T + V +A A+E A ++ E GI
Sbjct: 210 LSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVERE-GIGKSVTLC 268
Query: 418 LGLVGVLGKCGHLFEAQQFIE 438
L+ L KCG + A E
Sbjct: 269 NALIDTLAKCGDVDGAVAVFE 289
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 212/405 (52%), Gaps = 39/405 (9%)
Query: 258 QEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQST---IRG 310
Q G+ EA+ L + GV+ D E+ + +H + S+ +R
Sbjct: 236 QHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRL 295
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMA--DRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
+ + +I+MY KCGS+ DA VF + DR + +W+ M+NGYA +G E L F Q
Sbjct: 296 NARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQ 355
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
+R GL P + TF+ V +AC + ++E F SM E+GI P EHY +V +LG+ G
Sbjct: 356 LRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAG 415
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL----EDHAEE----------LMV 474
+ EA + ++ +P A W +L R+H +++L DH L+
Sbjct: 416 RVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLS 475
Query: 475 DLDPSKADPKKIPTPPPKKRTA-------ISILDGKSRLVEF-----RNPTLYRDDEKLK 522
++ + + +++ R + S ++ R+VEF +P KL+
Sbjct: 476 NMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLE 535
Query: 523 ALNQMKES-TYVPDTRYVLHDID---QEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+N M + +VP T VLHD+D AKEQAL HSE+LA+A+GLISTP T ++I+K
Sbjct: 536 EVNGMARARGHVPRTELVLHDLDDDDTAAKEQALAVHSEKLALAFGLISTPPGTAIKIVK 595
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLR C DCH +K++S + GR+++ RD RFHHF DG C+CGDYW
Sbjct: 596 NLRACADCHAVLKLVSEVTGRKIVFRDRNRFHHFVDGSCTCGDYW 640
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 312 LVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRK 371
+V ++ Y K G + DAR +FD + + + W+ M++GY +G E L+LF +M +
Sbjct: 193 VVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLR 252
Query: 372 LGLQPNEQTFLAVFSACGSADAIEEA-FIH-FESMKSEFGISPGTEHYLGLVGVLGKCGH 429
G++P+E + + SA E ++H F + S + L+ + KCG
Sbjct: 253 SGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGS 312
Query: 430 LFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
L +A + W A+ N +HG
Sbjct: 313 LEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHG 344
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 216/418 (51%), Gaps = 46/418 (11%)
Query: 246 LPPSV----ADLARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAK 297
L P+V A ++ CQ +A++ ++ VK +++ TL C P + +
Sbjct: 500 LTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGE 559
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + ++ D+ + +I+MY K G + A VF ++ ++++ W+ M+ GYA G
Sbjct: 560 EIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYG 619
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHY 417
G+E LF+ M K G++P+ TF A+ S C ++ + + + +F+SMK+++ I+P EHY
Sbjct: 620 HGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHY 679
Query: 418 LGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLD 477
+V +LGK G L EA FI +P + A W A+ R+H DI + + A + L+
Sbjct: 680 SCMVDLLGKAGFLDEALDFI-HAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLE 738
Query: 478 P----------------------------SKADPKKIPTPPP--KKRTAISIL--DGKSR 505
P A KIP + R I + +GKS
Sbjct: 739 PYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSH 798
Query: 506 LVEFRNPTLYRDDEKLKALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 565
E +Y D +L ++++K+ YVPDT V +ID KE+ LL H+E+LA+ YGL
Sbjct: 799 PEE---GEIYFDLYQL--ISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGL 853
Query: 566 ISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ TP+R++KN R+C DCH A K +S RE+ +RD RFHHF +G+CSC D W
Sbjct: 854 MKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L G K D+ + + ++ K++H Y ++S + D+ + +++MY K
Sbjct: 359 LQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDC 418
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSA 387
+ A VF H ++++ +W+ +I+GY GL D +L QM++ G++ + T+ ++ S
Sbjct: 419 LEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSG 478
Query: 388 CGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQ 439
+ EEA +KS G++P + ++ + + +A QF Q
Sbjct: 479 YSMSGCSEEALAVINRIKS-LGLTPNVVSWTAMISGCCQNENYTDALQFFSQ 529
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 274 KADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARR 333
KA L + CG + K++H Y ++ + + N ++ MY + + AR
Sbjct: 229 KATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARA 288
Query: 334 VFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADA 393
VFD D ++ SW+ +I+ YA NG + LF +M ++P+ T+ ++ S +
Sbjct: 289 VFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGS 348
Query: 394 IEEAFIHFESMKSEFGISP 412
E + S++S G P
Sbjct: 349 YENVLTNIRSLQSA-GFKP 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
EL DKGVK D+ + ++C +VH L+ + D+ L+ +I +Y KC
Sbjct: 121 ELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCL 180
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ A +VFD + W+ ++ + ++ L+L +M+ + + T + +
Sbjct: 181 GIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQ 240
Query: 387 ACGSADAIEEA 397
ACG A+ E
Sbjct: 241 ACGKLRALNEG 251
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 19/192 (9%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMD----SWHL 348
++NA+K+ + I+ DLV N ++ Y G +A V + + + SW
Sbjct: 450 FDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTA 509
Query: 349 MINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSE 407
MI+G N + LQ F QM++ ++PN T + AC +++ IH SMK
Sbjct: 510 MISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHG 569
Query: 408 F--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
F I T L+ + K G L A + E T W + I+G
Sbjct: 570 FVDDIYIAT----ALIDMYSKGGKLKVAHEVFRN--IKEKTLPCWNCMMMGYAIYG---- 619
Query: 466 EDHAEELMVDLD 477
H EE+ D
Sbjct: 620 --HGEEVFTLFD 629
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 213/397 (53%), Gaps = 40/397 (10%)
Query: 263 KEAI----ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYF---LQSTIRGDLVLN 315
KEA+ E++ G + + ++ C + + + +H Y L+S L
Sbjct: 349 KEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS-SLR 407
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
+I+MY KCG + A +VF+ + +S+ SW+ MI G+A +G D +F +MRK+G++
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467
Query: 376 PNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQ 435
P++ TF+ + SAC + ++ F +M ++ I+P EHY ++ +LG G EA++
Sbjct: 468 PDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 436 FIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-------------- 481
I + EP W +L +I G+++L + + ++ ++P
Sbjct: 528 MI-NNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAG 586
Query: 482 ---DPKKIPT----PPPKKRTAISILDGKSRLVEF--------RNPTLYRDDEKLKALNQ 526
+ KI KK S ++ S + EF RN +Y E+++ L
Sbjct: 587 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL-- 644
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
++++ +VPDT VL ++++E KE AL +HSE+LAIA+GLIST T L I+KNLRVC +C
Sbjct: 645 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 704
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
H A K++S+I RE+I RD RFHHF+DG CSC DYW
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAIEL----MD 270
SY + G+ + + ++ P D V A ++ + G KEA+EL M
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVV--SWNAMISGYAETGNYKEALELFKEMMK 259
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
++ D S T+ C E ++VH + +L + N ++++Y KCG +
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A +F+ + + + SW+ +I GY L E L LF++M + G +PN+ T L++ AC
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAH 379
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
AI+ +IH K + + L+ + KCG + A Q L +
Sbjct: 380 LGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSIL--HKSLSS 437
Query: 450 WEALRNYARIHGDID 464
W A+ +HG D
Sbjct: 438 WNAMIFGFAMHGRAD 452
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 32/211 (15%)
Query: 262 VKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEM 321
+K + ++ G+ ++ F L + C K ++ +++H + L+ DL ++ +I +
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISV 178
Query: 322 YGKCGSMTDARRVFDHMADRSMDS-------------------------------WHLMI 350
Y + G + DAR+VFD R + S W+ MI
Sbjct: 179 YVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMI 238
Query: 351 NGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGI 410
+GYA+ G E L+LF++M K ++P+E T + V SAC + +IE S + G
Sbjct: 239 SGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGR-QVHSWIDDHGF 297
Query: 411 SPGTEHYLGLVGVLGKCGHLFEAQQFIEQKL 441
+ L+ + KCG L A E L
Sbjct: 298 GSNLKIVNSLMDLYSKCGELETACGLFEGLL 328
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
A VF+ + + ++ W+ M G+A + L+L+ M LGL PN TF + +C
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146
Query: 391 ADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
+ A +E IH +K G + L+ V + G L +A++ ++ P +
Sbjct: 147 SKAFKEGQQIHGHVLK--LGYDLDLFVHTSLISVYVQNGRLEDARKVFDRS-PHRDVVSY 203
Query: 450 WEALRNYA 457
++ YA
Sbjct: 204 TALIKGYA 211
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 195/378 (51%), Gaps = 28/378 (7%)
Query: 273 VKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDAR 332
+K D+ + C + + ++VH +++ ++ + + VI+MY CG++ DA+
Sbjct: 321 LKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
R F M ++ + W+ MI G NG G + + LF QM+ GL P+E TF++V AC A
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440
Query: 393 AIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ E F M + P +HY ++ +LG+ G L A FI +PF+P + +
Sbjct: 441 MVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINN-MPFQPDFDVYST 499
Query: 453 LRNYARIHGDIDLEDHAEELMVDLDPS---------------------KADPKKIPTPPP 491
L RIHG+I L + + +++P+ K + +
Sbjct: 500 LLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRM 559
Query: 492 KKRTAISILDGKSRLVEFR-----NPTLYRDDEKLKALN-QMKESTYVPDTRYVLHDIDQ 545
KK S ++ + F +P ++ + LK L ++K++ YVP+T +L D+
Sbjct: 560 KKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSD 619
Query: 546 EAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 605
+ K+ L +HSE++AIA+GL+ T T +RI KNLR C DCH A K +S++ GR L+++D
Sbjct: 620 DMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKD 679
Query: 606 NKRFHHFKDGKCSCGDYW 623
RFH F+DG CSC DYW
Sbjct: 680 ANRFHVFQDGVCSCRDYW 697
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 72/129 (55%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ K +A ++ N AK VH ++++ G++ + +++MY K G
Sbjct: 112 EMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFG 171
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
M AR++F+ M++R++ +W+ +++GY+D+G +E + LF MR+ GL + T +++
Sbjct: 172 CMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIP 231
Query: 387 ACGSADAIE 395
A S ++
Sbjct: 232 ASLSVGCLQ 240
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 92/188 (48%), Gaps = 18/188 (9%)
Query: 260 GKVKEAIELMD----KGVKADASCFYTLFELC---GNPKWYENAKKVHDYFLQSTIRGDL 312
G +EAI+L + KG+ D FYT+ L + + +H + +++ D
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVD---FYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDK 258
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKL 372
+ ++++Y + DA RVF M+ + + +W LM+ G++ D ++ F +M +
Sbjct: 259 HIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGI 318
Query: 373 -GLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFG--ISPGTEHYLGLVGVLGKCG 428
L+ + + + S+C + A+++ +H ++K+ F I G+ ++ + CG
Sbjct: 319 QNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGS----AVIDMYANCG 374
Query: 429 HLFEAQQF 436
+L +A++F
Sbjct: 375 NLEDAKRF 382
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H + S + + L+N ++ Y CG + DA+++F H +++ SW ++I+G A N
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA-FIHFESMKSEFGISPGTE 415
E + +F +M +PN T +V A + I A +H ++ F + E
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 416 HYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHG 461
LV + K G + A+Q E E W A+ + HG
Sbjct: 161 --TALVDMYSKFGCMGVARQLFESMS--ERNVVTWNAIVSGYSDHG 202
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 206/390 (52%), Gaps = 34/390 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G+K D ++ C N + AK VH Y + + L ++N +I MY KCG
Sbjct: 337 EMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCG 396
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ AR VF+ M R++ SW MIN +A +G + L LF QM++ ++PNE TF+ V
Sbjct: 397 GLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLY 456
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
C + +EE F SM E+ I+P EHY +V + G+ L EA + IE +P P
Sbjct: 457 GCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIES-MPMAPN 515
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPS----------------KADPKKIPTPP 490
W +L + R+HG+++L + A + ++ L+P + D +I
Sbjct: 516 VVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWI 575
Query: 491 PKKRTAIS-------ILDGKSRLVEFRNPTLYRDDE---KL-KALNQMKESTYVPDTRYV 539
+K+ L+GKS + + +E KL + ++++K + YVPD V
Sbjct: 576 MEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSV 635
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTP------LRIIKNLRVCGDCHNAIKIM 593
L D+++E K+ +L+HSE+LA+ +GL++ +RI+KNLRVC DCH K++
Sbjct: 636 LVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLV 695
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S++ E+IVRD RFH +KDG CSC DYW
Sbjct: 696 SKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 48/250 (19%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R C+ G + EA +L D V D + CG + ++D+ +++ +
Sbjct: 187 IERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDV 246
Query: 309 RGDLVLNNKVIEMYG-------------------------------KCGSMTDARRVFDH 337
R D L ++ MY K G + DAR +FD
Sbjct: 247 RMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQ 306
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+ + W MI+ YA++ E L++FE+M G++P+ T L+V SAC + +++A
Sbjct: 307 TEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKA 366
Query: 398 -----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
+ H ++S I L+ + KCG L A+ E K+P W +
Sbjct: 367 KWVHRYTHLNGLESVLPIDN------ALINMYAKCGGLDAARDVFE-KMPTRNVVS-WSS 418
Query: 453 LRNYARIHGD 462
+ N +HG+
Sbjct: 419 MINAFAMHGE 428
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 298 KVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNG 357
++H + + D + +++MY CG + AR VFD M+ R + +W+ MI Y G
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194
Query: 358 LGDEGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
L DE +LFE+M+ + P+E + SACG
Sbjct: 195 LLDEAFKLFEEMKDSNVMPDEMILCNIVSACG 226
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 202/374 (54%), Gaps = 32/374 (8%)
Query: 257 CQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNN 316
C E ++ IE+ G + S F + C + E ++H +++ + N
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 317 KVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP 376
++ MY KCG+M DAR F+ M +R + SW+ MI GYA +G G E L++F+ MR +P
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 377 NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF 436
++ T + V +AC + +E+ +F SM +FG++ EHY ++ +LG+ G L EA
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 437 IEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA--------------- 481
+ + +PFEP + W AL +RIH + +L A E + +L+P A
Sbjct: 543 M-KDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 601
Query: 482 --DPKKIPTPPP----KKRTAISILDGKSRLVEFR-NPTLYRDDEKLKAL-----NQMKE 529
D +K+ KK S ++ ++++ F ++ + EK+ A +MK+
Sbjct: 602 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKK 661
Query: 530 STYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNA 589
+ YV T VLHD+++E KE L YHSE+LA+AYG+++ P P+R+IKNLRVCGDCHNA
Sbjct: 662 AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNA 721
Query: 590 ----IKIMSRIVGR 599
I++M ++ GR
Sbjct: 722 FKAWIELMLKVSGR 735
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 316 NKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQ 375
N ++ Y + G + +A+ VFD M + SW M+ Y+ G +E LQLF +M + G
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 376 PNEQTFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLG--LVGVLGKCGHLFE 432
N F V S C A+E +H +++ +G+ ++G L+ + KCG++ +
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC----FVGNALLAMYFKCGNMED 436
Query: 433 AQQFIEQ 439
A+ E+
Sbjct: 437 ARNAFEE 443
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 258 QEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNK 317
Q GK+ EA EL D+ D + + A+++ D + +R D+
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTA 260
Query: 318 VIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQP- 376
V+ Y + G + +ARRVFD M +R+ SW+ M+ Y + DE +LF M P
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM------PC 314
Query: 377 -NEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPG-----------TEHYLGLVGVL 424
N ++ + + A +EEA F++M + +S +E L L +
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 425 GKCGHLFEAQQF 436
G+CG F
Sbjct: 375 GRCGEWVNRSAF 386
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 253 LARLCQEGKVKEAIELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDL 312
LA + G+V+EA L + + D + L + G +W + + F + R D+
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDVISWNAL--MSGYVQW-GKMSEARELFDRMPGR-DV 224
Query: 313 VLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQM 369
V N ++ Y + G M +ARR+FD R + +W +++GYA NG+ +E ++F+ M
Sbjct: 225 VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 197/354 (55%), Gaps = 28/354 (7%)
Query: 297 KKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADN 356
+++H + ++ +++ N +++MY KC + AR VF+ + R + SW ++ G A +
Sbjct: 256 RQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQH 315
Query: 357 GLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEH 416
G +E L+ +M G++PNE TF+ + AC A +++ F+SMK E+G+ PG +H
Sbjct: 316 GRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQH 375
Query: 417 YLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDL 476
Y + +L + G+L EA++ I +P+EP W AL + + H D + + +++L
Sbjct: 376 YTCYLDLLSRSGYLSEAEKLI-TTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLEL 434
Query: 477 DP--------------------SKADPKKIPTPPPKKRT-AISILDG--KSRLVEFRNPT 513
P S A +KI ++ S ++ +SR+
Sbjct: 435 RPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVP 494
Query: 514 LYRDDEKL----KALNQMKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTP 569
L +E + +++M++ YVPDT V+HD+++ KEQ L HSERLA+A+G++ +P
Sbjct: 495 LDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSP 554
Query: 570 ARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
+ +R++KNLRVCGDCH +K +S I R++IVRD RFHHF+DG CSC ++W
Sbjct: 555 PGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGS 327
L D ++ D +L G + +++H +F S D V+ + +I+MY KCG
Sbjct: 94 LSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGV 153
Query: 328 MTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL 374
DAR+VFD + ++ W +I+GYA NG E L LF+ M GL
Sbjct: 154 PQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGL 200
>gi|215713517|dbj|BAG94654.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635568|gb|EEE65700.1| hypothetical protein OsJ_21333 [Oryza sativa Japonica Group]
Length = 382
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 206/385 (53%), Gaps = 30/385 (7%)
Query: 266 IELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKC 325
+ + + G ++ ++ C E ++VH + L+ DL+L+N +++MY KC
Sbjct: 1 MRMKEAGFLSNQGTLTSVLRACTGLVTLEVGRQVHAHVLKYD--KDLILHNALLDMYCKC 58
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
GS+ DA +F M R + SW MI+G A NG E L++F+ M+ G +PN T + V
Sbjct: 59 GSLQDADALFGRMPQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVL 118
Query: 386 SACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEP 445
AC A +E+ + +F SM+ FGI P EH +V +LG+ G L +A +FI + + F+P
Sbjct: 119 FACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNCMVDLLGRAGKLDDAVKFIHE-MNFQP 177
Query: 446 TAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-----------------ADPKK--- 485
+ W L R+H + DL +A + ++ L+P AD +K
Sbjct: 178 DSVIWRTLLGACRMHKNADLAAYAAKEILRLEPDDQGARILLSNTYADLRQWADAEKSWK 237
Query: 486 -IPTPPPKKRTAISILD-GKSRLV----EFRNPTLYRDDEKLKAL-NQMKESTYVPDTRY 538
+ KK S ++ GK V + +P ++L L +++ Y P T +
Sbjct: 238 MMRDRGVKKDPGRSWIELGKQVHVFIAGDLSHPCSESIIQELSRLFSRVTNLGYTPQTEF 297
Query: 539 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVG 598
VL D+ E KE L YHSE+LAIA+G ++ P+RI+KNLR+CGDCH K++S+ G
Sbjct: 298 VLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLRICGDCHAFAKLVSKSEG 357
Query: 599 RELIVRDNKRFHHFKDGKCSCGDYW 623
+ +I+RD RFHHF+DG CSC DYW
Sbjct: 358 KVIIIRDPVRFHHFQDGVCSCNDYW 382
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 208/405 (51%), Gaps = 37/405 (9%)
Query: 253 LARLCQEGKVKEAIEL----MDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
LA Q K K+A+ L + +G D F ++ + C + K +H+
Sbjct: 344 LAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGF 403
Query: 309 RGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQ 368
D++L ++ MY KCGS+ DA++ FD ++++ + SW MI A +G +E L+L
Sbjct: 404 EKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHL 463
Query: 369 MRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCG 428
M G+ NE T +V AC + E +F + +FGI E+ +G + +LG+ G
Sbjct: 464 MNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAG 523
Query: 429 HLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSK-------- 480
L EA+ + +PF+ + L ++HGD+ + +V L+P
Sbjct: 524 WLKEAEHVL-HTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLN 582
Query: 481 ---------ADPKKI----PTPPPKKRTAISILDGKSRLVEF--------RNPTLYRDDE 519
D K+ K++T S ++ + ++ EF RN + + E
Sbjct: 583 NMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELE 642
Query: 520 KLKALNQMKEST-YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 578
+L ++MKE YVPDTR V HD+ + KE+ L +HSE++A+ +GLI++P + LRIIK
Sbjct: 643 RL--YSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIK 700
Query: 579 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
NLRVC DCH K+ S+I GR +IVRD RFHHF+ G CSCGDYW
Sbjct: 701 NLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
++ +G++ DA + + C +P + + K +H + L+S G++ + N +I MY KCG
Sbjct: 160 KMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCG 219
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
S+ D++ +F M + + SW+ MI Y G + LF +M LG P+ TF ++
Sbjct: 220 SLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILG 279
Query: 387 ACGSADAIEEA-FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQF---IEQK 440
AC S +E+ +H F ++ L+ + +CG L A+++ IE+K
Sbjct: 280 ACASPKRLEDGRMLHVRITARGFDRDFAMQN--NLISMFTRCGSLESARRYFYSIEKK 335
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 21/204 (10%)
Query: 276 DASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRG---DLVLNNKVIEMYGKCGSMTDAR 332
D F ++ C +PK E+ + +H ++ T RG D + N +I M+ +CGS+ AR
Sbjct: 270 DIYTFSSILGACASPKRLEDGRMLH---VRITARGFDRDFAMQNNLISMFTRCGSLESAR 326
Query: 333 RVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSAD 392
R F + + + +W+ M+ YA G + L L++ M G P+ TF +V +C S
Sbjct: 327 RYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLG 386
Query: 393 AIEEA-FIHFESMKSEF--GISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEF 449
A+ E FIH S F + GT LV + KCG L +A++ + + +
Sbjct: 387 ALREGKFIHECSTSCGFEKDVILGT----ALVNMYAKCGSLADAKKSFDGISNKDVVS-- 440
Query: 450 WEALRNYARIHGDIDLEDHAEELM 473
W A+ + HG HAEE +
Sbjct: 441 WSAMIAASAQHG------HAEEAL 458
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 311 DLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMR 370
D L N +I+MYGKC S DAR+VFD + R+ SW +++ Y N + E L+++++M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 371 KLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHL 430
+ + + T +V +AC +EE + + E G L+ + KCG L
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRM-VQRKAEELGFEKDVVVATSLIHLFAKCGCL 119
Query: 431 FEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDL 465
EA+ + Y R HG DL
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVR-HGKNDL 153
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E++ K + DA ++ C E + V + D+V+ +I ++ KCG
Sbjct: 58 EMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCG 117
Query: 327 SMTDARRVFDHM-ADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVF 385
+ +A VF M A R + S MI Y +G D L + +MR GL+P+ T+ A+
Sbjct: 118 CLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177
Query: 386 SACGSADAIEEA-FIHFESMKSE-FG-ISPGTEHYLGLVGVLGKCGHLFEAQQFI 437
AC S D + + IH ++S+ FG IS L+ + KCG L +++
Sbjct: 178 GACSSPDFLLDGKHIHKHILESKHFGNISVRN----ALITMYAKCGSLKDSKSLF 228
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 202/390 (51%), Gaps = 34/390 (8%)
Query: 267 ELMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCG 326
E+ G+K D +++ C N + AK VH + + +L +NN +I MY KCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 327 SMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFS 386
+ R VF+ M R++ SW MIN + +G + L LF +M++ ++PNE TF+ V
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 387 ACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPT 446
C + +EE F SM E+ I+P EHY +V + G+ L EA + IE +P
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES-MPVASN 512
Query: 447 AEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRL 506
W +L + RIHG+++L A + +++L+P + + + + R+
Sbjct: 513 VVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 507 VE----FRNPTLYRDDEKLKA-----------------------LNQMKESTYVPDTRYV 539
+E F+ L R D+ K+ ++++K + YVPD V
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSV 632
Query: 540 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTP------LRIIKNLRVCGDCHNAIKIM 593
L D+++E K+ +L+HSE+LA+ +GL++ +RI+KNLRVC DCH K++
Sbjct: 633 LVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLV 692
Query: 594 SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
S++ RE+IVRD RFH +K+G CSC DYW
Sbjct: 693 SKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 253 LARLCQEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTI 308
+ R C+ G V EA +L D V D + CG + ++++ +++ +
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 309 RGDLVLNNKVIEMYG-------------------------------KCGSMTDARRVFDH 337
R D L ++ MY KCG + DA+ +FD
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 338 MADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEA 397
+ + W MI+ Y ++ E L++FE+M G++P+ + +V SAC + +++A
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 398 -----FIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEA 452
IH ++SE I+ L+ + KCG L +A + + +K+P W +
Sbjct: 364 KWVHSCIHVNGLESELSINN------ALINMYAKCGGL-DATRDVFEKMPRRNVVS-WSS 415
Query: 453 LRNYARIHGD 462
+ N +HG+
Sbjct: 416 MINALSMHGE 425
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 319 IEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNE 378
++MY CG + AR VFD M+ R + +W+ MI Y GL DE +LFE+M+ + P+E
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE 212
Query: 379 QTFLAVFSACG 389
+ SACG
Sbjct: 213 MILCNIVSACG 223
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 207/397 (52%), Gaps = 33/397 (8%)
Query: 258 QEGKVKEAIELM----DKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLV 313
Q+G +EA++L +G++ + F TL + K+VH L+ + +
Sbjct: 221 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 280
Query: 314 LNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLG 373
L N +I+MY KCG + +RRVFD+M +RS+ SW+ M+ GY +GLG E + LF+ + K
Sbjct: 281 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-E 339
Query: 374 LQPNEQTFLAVFSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEA 433
++P+ T LAV S C ++E F+++ E T HY ++ +LG+ G L +A
Sbjct: 340 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 399
Query: 434 QQFIEQKLPFEPTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKAD----------- 482
IE +PFE T W +L R+H ++ + + + +++++P A
Sbjct: 400 LNLIEN-MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAA 458
Query: 483 ---------------PKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKAL-NQ 526
K + P + + + E +P+ + K+K +
Sbjct: 459 AGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVD 518
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+K + +VPD VLHD+D E KE+ LL HSE+LAI +GL++TP +R++KNLR+C DC
Sbjct: 519 IKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDC 578
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HN K +S++ RE+ +RD RFH G C+CGDYW
Sbjct: 579 HNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 264 EAIELMDKGVKADAS----CFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVI 319
EA++L K ++A T+ C P+ K+VH +++ + + + ++
Sbjct: 126 EALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLL 185
Query: 320 EMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQ 379
+MY K ++ +ARRVFD + +R + S +I+GYA GL +E L LF Q+ G+Q N
Sbjct: 186 DMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHV 245
Query: 380 TFLAVFSACGSADAIEEAF-IHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIE 438
TF + +A +++ +H ++ E ++ L+ + KCG L +++ +
Sbjct: 246 TFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN--SLIDMYSKCGKLLYSRRVFD 303
Query: 439 QKLPFEPTAEFWEA-LRNYARIHG 461
L E + W A L Y R HG
Sbjct: 304 NML--ERSVVSWNAMLMGYGR-HG 324
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + ++VH + + R + L +++ MY +CG++ DAR V D M +RS+ SW
Sbjct: 52 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 111
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAI 394
MI+GY+ E L LF +M + G PNE T V ++C +I
Sbjct: 112 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSI 159
>gi|297735282|emb|CBI17644.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 174/337 (51%), Gaps = 51/337 (15%)
Query: 287 CGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSW 346
C + E ++VH Y + D+ L + +I+MY KCGS+ DA +F+ DR++ W
Sbjct: 343 CASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLW 402
Query: 347 HLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGSADAIEEAFIHFESMKS 406
MI+G A +G G E ++LFE M G+ PNE +F+ V +AC A +EE +F M+
Sbjct: 403 TSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE 462
Query: 407 EFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFWEALRNYARIHGDIDLE 466
+GI PG EH+ +V + G+ G L E ++FI + W + + R H
Sbjct: 463 VYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNN-AISKLSSVWRSFLSSYRSH------ 515
Query: 467 DHAEELMVDLDPSKADPKKIPTPPPKKRTAISILDGKSRLVEFRNPTLYRDDEKLKALNQ 526
P+ S LD + + +
Sbjct: 516 ------------------------PQDTKIYSYLD--------------------ELIGR 531
Query: 527 MKESTYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 586
+KE Y D V+ D++QE ++ L YHSE+LAIAYG+IST TP+R++KNLRVC DC
Sbjct: 532 LKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDC 591
Query: 587 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 623
HN IK S ++GRE+I+RD RFHHFK G CSC DYW
Sbjct: 592 HNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 628
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 293 YENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMING 352
Y N++ +H +++ G + N ++ +Y K ++ A ++F+ + + SW ++I+G
Sbjct: 50 YPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISG 107
Query: 353 YADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
+A GL + L LF +M+ G+ PN+ T V +C S
Sbjct: 108 FARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSS 145
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 296 AKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTDARRVFDHMADRSMDSWHLMINGYAD 355
K +H + L++ + D VLNN +++ Y KC A ++F MA++ SW++M++ Y
Sbjct: 153 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQ 212
Query: 356 NGLGDEGLQLFEQM 369
G + + LF Q+
Sbjct: 213 IGDMQKSVDLFRQL 226
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 204/387 (52%), Gaps = 34/387 (8%)
Query: 268 LMDKGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIR--GDLVLNNKVIEMYGKC 325
++ VK + F + C + K VH Y + +R + L +I+MY KC
Sbjct: 355 MLRSNVKPNDVTFLGILHACACLGALDLGKWVHAY-IDKNLRNSSNASLWTSLIDMYAKC 413
Query: 326 GSMTDARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGL-QPNEQTFLAV 384
G + A RVF M R++ SW+ M++G+A +G + L LF +M GL +P++ TF+ V
Sbjct: 414 GCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGV 473
Query: 385 FSACGSADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFE 444
SAC A ++ +F SM ++GISP +HY ++ +L + FE + + + + E
Sbjct: 474 LSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLAR-AEKFEEAEILMKNMEME 532
Query: 445 PTAEFWEALRNYARIHGDIDLEDHAEELMVDLDPSKA-----------------DPKKIP 487
P W +L + + HG ++ ++ E + L+P A D +I
Sbjct: 533 PDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIR 592
Query: 488 TPPPKKR-------TAISILDGKSRLVEFRNPTLYRDDEKLKALNQ----MKESTYVPDT 536
T K T+I I DG + + K LN+ ++E+ +VP+T
Sbjct: 593 TRLNDKGMKKVPGCTSIEI-DGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNT 651
Query: 537 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRI 596
VL+D+D+E KE AL HSE+LAI++GLI T T +RI+KNLRVCG+CH+A K++S+I
Sbjct: 652 SEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKI 711
Query: 597 VGRELIVRDNKRFHHFKDGKCSCGDYW 623
RE+I RD RFHHFKDG CSC D W
Sbjct: 712 FNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 215 SYQQVSPGHQIPNQLNNVPNNMNQCPAGDQVLPPSVADLARLCQEGKVKEAI----ELMD 270
S+ + G+ L++ ++ P D V A ++ Q G+ +EAI E+ +
Sbjct: 199 SFTALITGYVSQGCLDDARRLFDEIPVKDVV--SWNAMISGYVQSGRFEEAIVCFYEMQE 256
Query: 271 KGVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMTD 330
V + S + CG+ + E K + + + +L L N +I+MY KCG
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI 316
Query: 331 ARRVFDHMADRSMDSWHLMINGYADNGLGDEGLQLFEQMRKLGLQPNEQTFLAVFSACGS 390
AR +FD + ++ + SW+ MI GY+ L +E L LFE M + ++PN+ TFL + AC
Sbjct: 317 ARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACAC 376
Query: 391 ADAIEEAFIHFESMKSEFGISPGTEHYLGLVGVLGKCGHLFEAQQFIEQKLPFEPTAEFW 450
A++ + S + L+ + KCG + EA + + + + A W
Sbjct: 377 LGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCI-EAAERVFRSMHSRNLAS-W 434
Query: 451 EALRNYARIHG 461
A+ + +HG
Sbjct: 435 NAMLSGFAMHG 445
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Query: 272 GVKADASCFYTLFELCGNPKWYENAKKVHDYFLQSTIRGDLVLNNKVIEMYGKCGSMT-- 329
GV+ ++ F LF+ C K K++H + L+ + + ++ VI MY G M
Sbjct: 126 GVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFA 185
Query: 330 -----------------------------DARRVFDHMADRSMDSWHLMINGYADNGLGD 360
DARR+FD + + + SW+ MI+GY +G +
Sbjct: 186 RLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFE 245
Query: 361 EGLQLFEQMRKLGLQPNEQTFLAVFSACG 389
E + F +M++ + PN+ T + V SACG
Sbjct: 246 EAIVCFYEMQEANVLPNKSTMVVVLSACG 274
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,662,037,949
Number of Sequences: 23463169
Number of extensions: 478619176
Number of successful extensions: 2206293
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8875
Number of HSP's successfully gapped in prelim test: 20342
Number of HSP's that attempted gapping in prelim test: 1835283
Number of HSP's gapped (non-prelim): 190815
length of query: 623
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 474
effective length of database: 8,863,183,186
effective search space: 4201148830164
effective search space used: 4201148830164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)