BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044792
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 7/177 (3%)
Query: 6 QKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTF 65
+K+KG QKIE+ +++ +S QVTFSKR+ GLF KASELC LCGAEVAIV+ SP ++ F+F
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62
Query: 66 GHPNPDDVLDRFLTGAGAESSLAAT-----TVEDEKLERLKQEYVELLNRLKEEEKKRDE 120
GHPN D V+DRF+ T + ++ L ++L++L+ E+KK DE
Sbjct: 63 GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122
Query: 121 IAKKRGNDRANGVFWWDQYSIDDMERDELELYLKSLEKLKTSVKSKVDELAAASVAS 177
+ K R +A G +W D ++++ +LE + +LE LK V + A+V +
Sbjct: 123 LKKIREKTKALGNWWED--PVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPN 177
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 102/162 (62%), Gaps = 15/162 (9%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G QKI + +++++S RQVTFSKR+ GLF KASELC LCGAE+ I++ SP K+ F+FGHP+
Sbjct: 63 GRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPS 122
Query: 70 PDDVLDRFLTGAGAESSLAATTVEDEKLE-------RLKQEYVELLNRLKEEEKKRDEIA 122
+ VLDR+++ SLA + ++L+ L + +L+ ++EE+KK +
Sbjct: 123 VESVLDRYVSRNNM--SLA----QSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAME 176
Query: 123 KKRGND-RANGVFWWDQYSIDDMERDELELYLKSLEKLKTSV 163
+ R R + + WW++ +++M +L+ +LE+L+ +V
Sbjct: 177 EMRKESVRRSMINWWEK-PVEEMNMVQLQEMKYALEELRKTV 217
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 17/162 (10%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPDD 72
K ++KR+E ++RQVTFSKR+ GL KA EL VLC AEV+++I SP + + F N D
Sbjct: 5 KTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQD 64
Query: 73 VLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKE-EEKKRDEIAKKRGNDRAN 131
+DR+L + ++ V +E ++ LK E ++ ++++ E KR + + G
Sbjct: 65 TIDRYLR--HTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGT---- 118
Query: 132 GVFWWDQYSIDDMER--DELELYLKSLEKLKTSV-KSKVDEL 170
SI+++++ +LE +K + KT V K ++++L
Sbjct: 119 -------CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQL 153
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 12 QKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPD 71
+KI IK+++ +ARQVTFSKR++G+F KA EL VLC A+VA++I S + F F
Sbjct: 4 EKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMR 63
Query: 72 DVLDRFLTGAGAESSLAATTVE---DEKLERLKQEYVELLNRLKEEEKKRDEIAKKRGND 128
D+L R+ SL A+ + D L+ E L KE E K ++ K RG D
Sbjct: 64 DILGRY--------SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGED 115
Query: 129 RANGVFWWDQYSIDDMERDELELYLKSLEKLKTSVKSKVDELAAASVASNNF 180
D ++++++R LEKL S S+V E V S F
Sbjct: 116 -------LDGLNLEELQR---------LEKLLESGLSRVSEKKGECVMSQIF 151
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
E+S Q+ G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R
Sbjct: 10 ESSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 69
Query: 62 AFTFGHPNPDDVLDRFL------TGAGAESSLAATTVEDEKLERLKQEYVELLN 109
+ + + + ++R+ + G+ + + A + E +L+Q+ + + N
Sbjct: 70 LYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQES-AKLRQQIISIQN 122
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 12 QKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPD 71
++I I+R++ +ARQVTFSKR++GLF KA EL +LC AEV +V+ S + F F + +
Sbjct: 23 ERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSME 82
Query: 72 DVLDRF--------------LTGAGAESSLAATTVED--EKLERLKQEYVELLNRLKEEE 115
++DR+ L G +SS A E+ E RL+Q E L+RL E+
Sbjct: 83 QIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQ 142
Query: 116 KKRDEIAKKRGND---RANGVFWWDQYSIDDMERDELELYLKSL---EKLKTSVKSKVDE 169
+ E + + G + D+ ID +ER ++L ++L E+L+ S S+++E
Sbjct: 143 LQELEKSLESGLGSVLKTKSKKILDE--IDGLERKRMQLIEENLRLKEQLQVSRMSRMEE 200
Query: 170 L 170
+
Sbjct: 201 M 201
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E ++RQVTFSKR+ GL KA EL VLC AEVA+++ S + F +
Sbjct: 2 GRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTG 61
Query: 70 PDDVLDRF-----LTGAGAESSLAATTVEDEKLERLKQEYVEL 107
L R+ + + AE A + ++L +L++++++L
Sbjct: 62 MKQTLSRYGNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQL 104
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E K++RQVTF KR+ GL KA EL +LC AE+A+++ S R + F + N
Sbjct: 2 GRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVN 61
Query: 70 PD-DVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKE-EEKKRDEIAKKRGN 127
++R+ A A +S +A ++ + +QE ++ ++++ + R I +
Sbjct: 62 STRSTIERY-KKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGE---- 116
Query: 128 DRANGVFWWDQYSIDDMERDELELYLKSLEKLKTSVKSKVDEL 170
SI +M EL+ LEK + ++SK EL
Sbjct: 117 ------------SIGNMTAKELKSLENRLEKGISRIRSKKHEL 147
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 12 QKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPD 71
+KI+IK+++ +ARQVTFSKR++GLF KA EL VLC A+VA++I S + F + +
Sbjct: 4 EKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMK 63
Query: 72 DVLDRF-LTGAGAE----SSLAATTVEDEKLERLKQEYVELLNRLKE 113
+L+R L E SL VE+ RL +E E +RL++
Sbjct: 64 QILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQ 110
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR++ ++RQVTFSKR+ GLF KA EL +LC AEV +++ S R + F +
Sbjct: 2 GRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS 61
Query: 70 PDDVLDRF 77
+++R+
Sbjct: 62 MKSIIERY 69
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPDD 72
KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+V+ S R + + + + +
Sbjct: 47 KIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKE 106
Query: 73 VLDRFLTGAGAESSLAATTVE------DEKLERLKQEYVELLN 109
++R+ A +++S A+T E ++ +LKQ+ L N
Sbjct: 107 TIERY-KKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQN 148
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 15 EIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPDDVL 74
EIKR+E +ARQVTFSKR++GLF KA EL VLC A+VA+++ S + F + ++++
Sbjct: 7 EIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEII 66
Query: 75 DRFLTGAG----AESSLAATTVEDEKLERLKQEYVELLNRLKE 113
D++ T + AE +E K L ++ E RL++
Sbjct: 67 DKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQ 109
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KI IKR+ ++RQVTFSKR+ GL KA EL +LC AEV ++I S R + F +
Sbjct: 2 GRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSS 61
Query: 70 PDDVLDRFLTGAGAESS 86
V++R+ G SS
Sbjct: 62 MKSVIERYSDAKGETSS 78
>sp|Q38841|AGL12_ARATH Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana
GN=AGL12 PE=2 SV=2
Length = 211
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNP-D 71
KI++KR+E RQVTF KR+ GL KA EL VLC AE+ +VI SP + F +
Sbjct: 5 KIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTME 64
Query: 72 DVLDRFL--TGAGAESSLAATTVEDEKLERLKQEYVELLNRLKEE 114
++D+++ TG G SS +AT E+L+ + + +N LK+E
Sbjct: 65 GMIDKYMKCTGGGRGSS-SATFTAQEQLQPPNLDPKDEINVLKQE 108
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 35/169 (20%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTF-GHP 68
G KIE+KR+E K++RQVTFSKR+ GL K EL VLC A++ ++I S + F + P
Sbjct: 5 GRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQP 64
Query: 69 NP-DDVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKEEEKKRDEIAKKRGN 127
+ ++ R+L G A+ VED +++ DE+AK R
Sbjct: 65 HSMSQIISRYLQTTG-----ASLPVEDNRVQLY------------------DEVAKMR-R 100
Query: 128 DRANGVFWWDQYSIDDM------ERDELELYLKSLEKLKTSVKSKVDEL 170
D N +Y DD+ E +ELE K LE ++++ EL
Sbjct: 101 DTLNLQLSLQRYKGDDLSLAQYEELNELE---KQLEHALNKIRARKLEL 146
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
Query: 12 QKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPD 71
+KI+I++++ +ARQVTFSKR++GLF KA EL VLC A+VA++I S + F F +
Sbjct: 4 EKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMK 63
Query: 72 DVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVEL 107
+VL+R ++ + LE+L Q +EL
Sbjct: 64 EVLERH-------------NLQSKNLEKLDQPSLEL 86
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R + + + N
Sbjct: 2 GRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN 61
Query: 70 PDDVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKEEEKKRDEIAKKRGNDR 129
++R+ S +TV++ +QE +L R +I + ++R
Sbjct: 62 IRSTIERY--KKACSDSTNTSTVQEINAAYYQQESAKL----------RQQIQTIQNSNR 109
Query: 130 ANGVFWWDQYSIDDMERDELELYLKSLEKLKTSVKSKVDEL 170
D S+ + EL+ LEK + ++SK EL
Sbjct: 110 N---LMGD--SLSSLSVKELKQVENRLEKAISRIRSKKHEL 145
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
E S Q+ G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R
Sbjct: 10 EISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 69
Query: 62 AFTFGHPNPDDVLDRFL--------TGAGAESSLAATTVEDEKL 97
+ + + + ++R+ TG+ AE++ E KL
Sbjct: 70 LYEYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKL 113
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGH-PNPD 71
+ E+KR+E ++RQVTFSKR+ GL KA EL VLC AEVA+++ SP R + F P+
Sbjct: 5 RTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQ 64
Query: 72 DVLDRF 77
+DR+
Sbjct: 65 KTIDRY 70
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFG-HP 68
G +IEIKR+E ++RQVTF KR+ GL KA EL VLC AEVA+++ S R + + +
Sbjct: 2 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNN 61
Query: 69 NPDDVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLK 112
N +DR+ S+ A +E + +QE +L ++++
Sbjct: 62 NVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQ 105
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 47/217 (21%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R + + + +
Sbjct: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 61
Query: 70 PDDVLDRFLTGAGAESSLAATTVE------DEKLERLKQEYVELLNR------------- 110
++R+ A +++S + T E ++ +L+Q+ L N
Sbjct: 62 VKSTVERY-KKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTM 120
Query: 111 ----LKEEEKKRDE-IAKKRGNDRANGVFWWDQYSIDDMERDELEL-----YLKS----- 155
LK+ E + ++ IAK R R N + + + ++ M++ E+EL YL+S
Sbjct: 121 SLRDLKQVENRLEKGIAKIRA--RKNELLYAE---VEYMQKREVELQNDNMYLRSKVVEN 175
Query: 156 ------LEKLKTSVKSKVDELAAASVASNNFVNQFNI 186
L + + S+ D + S NF+ Q NI
Sbjct: 176 ERGQQPLNMMGAASTSEYDHMVNNPYDSRNFL-QVNI 211
>sp|Q9S7Q7|FLC_ARATH MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC
PE=2 SV=1
Length = 196
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHP- 68
G +K+EIKR+E KS+RQVTFSKR+ GL KA +L VLC A VA++++S + ++F
Sbjct: 2 GRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGD 61
Query: 69 NPDDVLDRF 77
N +LDR+
Sbjct: 62 NLVKILDRY 70
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G ++E+KR+E K RQVTFSKR+ GL KA EL VLC AEVA++I S + + FG
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 61
Query: 70 PDDVLDRF----LTGAGAESSLAATTVED--EKLERLKQEYVELLNR 110
+ L+++ G+ S+LA + +++ RLK + +E L R
Sbjct: 62 INKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTK-LECLQR 107
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGH-PNPD 71
+ E+KR+E ++RQVTFSKR+ GL KA EL VLC AEVA+++ SP R + F P+
Sbjct: 5 RTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQ 64
Query: 72 DVLDRF 77
+DR+
Sbjct: 65 KTIDRY 70
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
E S Q+ G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R
Sbjct: 10 EISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 69
Query: 62 AFTFGHPNPDDVLDRF 77
+ + + + ++R+
Sbjct: 70 LYEYANNSVKATIERY 85
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGH-P 68
G ++++KR+E K RQVTFSKR+ GLF KA E+ VLC AEVA+V+ S + F + P
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDP 61
Query: 69 NPDDVLDRFLTGAGAESSLAA 89
+ +L+R+ + AE L A
Sbjct: 62 CMEKILERYERYSYAERQLIA 82
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 4 SKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAF 63
S Q+ G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R +
Sbjct: 12 SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 71
Query: 64 TFGHPNPDDVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKEEEKKRDEIAK 123
+ + + ++R+ S ++V + + +QE +L R EI+
Sbjct: 72 EYANNSVKGTIERY--KKACTDSPNTSSVSEANAQFYQQEASKL----------RQEISS 119
Query: 124 KRGNDRANGVFWWDQYSIDDMERDELELYLKSLEKLKTSVKSKVDELAAASV 175
+ N+R ++ D++ E + LEK + ++SK +EL A +
Sbjct: 120 IQKNNRNMMGESLGSLTVRDLKGLETK-----LEKGISRIRSKKNELLFAEI 166
>sp|Q9C633|AGL97_ARATH Agamous-like MADS-box protein AGL97 OS=Arabidopsis thaliana
GN=AGL97 PE=1 SV=1
Length = 266
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 19/123 (15%)
Query: 12 QKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIV---IMSPHKRAF-TFGH 67
+KI I++++ K+ R V+FSKR+KGL++KASELC+L AE+AI+ + S AF +FGH
Sbjct: 6 RKIAIEKIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAIIATPVSSNSNAAFYSFGH 65
Query: 68 PNPDDVLDRFLTGAGA--------ESSLAATTVEDEKLERLKQ---EYVELLNRLKEEEK 116
+ D+V+ FL + SL ++ E LE L++ +L LKE EK
Sbjct: 66 SSVDNVVAAFLANQRPCDERFWWEDESL----LKSENLEELREAMDSMSTMLRDLKELEK 121
Query: 117 KRD 119
+RD
Sbjct: 122 QRD 124
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KI I+R++ ++RQVTFSKR+ GL KA EL +LC AEV +V+ S R + F N
Sbjct: 2 GRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTN 61
Query: 70 PDDVLDRF------LTGAGAESSL 87
V+DR+ L G A S +
Sbjct: 62 MKTVIDRYTNAKEELLGGNATSEI 85
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana
GN=AGL5 PE=1 SV=1
Length = 246
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
E+SK+ +G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+VI S R
Sbjct: 11 ESSKKIGRG--KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR 68
Query: 62 AFTFGHPNPDDVLDRF 77
+ + + + ++R+
Sbjct: 69 LYEYANNSVRGTIERY 84
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1
PE=2 SV=1
Length = 248
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
E S Q+ G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+V+ S R
Sbjct: 10 EISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGR 69
Query: 62 AFTFGHPNPDDVLDRF 77
+ + + + ++R+
Sbjct: 70 LYEYANNSVKATIERY 85
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGH-P 68
G K+++KR+E K RQVTFSKR+ GL KA E+ VLC AEVA ++ SP + + +
Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS 61
Query: 69 NPDDVLDRFLTGAGAESSLAATTVEDE 95
D +L+R+ + AE +L + E E
Sbjct: 62 RMDKILERYERYSYAEKALISAESESE 88
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPDD 72
K E+KR+E ++RQVTFSKR+ GL KA EL VLC AEVA+VI SP + + F +
Sbjct: 5 KTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAA 64
Query: 73 VLDRF 77
++R+
Sbjct: 65 TIERY 69
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 13 KIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPNPDD 72
K ++KR+E ++RQVTFSKR+ GL KA EL VLC AEVA+++ SP + + F +
Sbjct: 5 KTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQK 64
Query: 73 VLDRFLT 79
++R+ T
Sbjct: 65 TIERYRT 71
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E + RQVTFSKR+ GL KA+EL VLC A V +VI S + F + P
Sbjct: 2 GRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPT 61
Query: 70 PD--DVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKEEEKKRDEIAKKRGN 127
++++ + T T E++ +Q +VE+ E EK I + G+
Sbjct: 62 CSLRELIEHYQT---------VTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGD 112
Query: 128 DRAN 131
D +N
Sbjct: 113 DLSN 116
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
GN=AGL1 PE=1 SV=1
Length = 248
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
E+SK+ +G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+VI S R
Sbjct: 11 ESSKKLGRG--KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR 68
Query: 62 AFTFGHPNPDDVLDRF 77
+ + + + ++R+
Sbjct: 69 LYEYANNSVRGTIERY 84
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G ++E+KR+E K RQVTFSKR+ GL KA EL VLC AEVA++I S + + FG
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG 61
Query: 70 PDDVLDRF 77
+ ++R+
Sbjct: 62 IESTIERY 69
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G ++E+KR+E K RQVTFSKR+ GL KA EL VLC AEVA++I S + + FG
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 61
Query: 70 PDDVLDRF 77
L+R+
Sbjct: 62 ITKTLERY 69
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E + RQVT+SKR+ G+ KA EL VLC A+VAI++ S + F P+
Sbjct: 2 GRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPS 61
Query: 70 PD--DVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRLKEEEKK-RDEIAKKRG 126
D + DR+ G T++ E+ E +++ L+ LK+ + R EI ++ G
Sbjct: 62 TDIKGIFDRYQQAIG-------TSLWIEQYENMQR----TLSHLKDINRNLRTEIRQRMG 110
Query: 127 NDRANGVFWWDQYSIDDMERDEL 149
D +D +E DEL
Sbjct: 111 ED------------LDGLEFDEL 121
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E ++RQVTFSKR+ GL KA EL VLC AEVA+++ S + F F +
Sbjct: 2 GRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTS 61
Query: 70 PDDVLDRF 77
L R+
Sbjct: 62 MKKTLLRY 69
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G K+E+KR+E K +RQVTF+KR+ GL KA EL VLC AEVA++I S R F F +
Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSS 61
Query: 70 -PDDVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRL 111
L+R+ + +S A+ + +L QEY++L R+
Sbjct: 62 CMYKTLERYRSCNYNLNSCEASAALETELSNY-QEYLKLKTRV 103
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G K+E+KR+E K +RQVTF+KR+ GL KA EL VLC AEVA++I S R F F +
Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSS 61
Query: 70 -PDDVLDRFLTGAGAESSLAATTVEDEKLERLKQEYVELLNRL 111
L+R+ + +S A+ + +L QEY++L R+
Sbjct: 62 CMYKTLERYRSCNYNLNSCEASAALETELSNY-QEYLKLKTRV 103
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G K+E+KR+E K RQVTFSKRK GL KA EL VLC AEV+++I S + + F +
Sbjct: 2 GRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVG 61
Query: 70 PDDVLDRF 77
++R+
Sbjct: 62 VGRTIERY 69
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KI I+R++ ++RQVTFSKR+KGL KA EL +LC AEV ++I S + + F +
Sbjct: 2 GRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSS 61
Query: 70 PDDVLDRF 77
V+DR+
Sbjct: 62 MKSVIDRY 69
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 2 EASKQKNKGLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKR 61
++S + G KIEIKR+E + RQVTF KR+ GL KA EL VLC AEVA+++ S R
Sbjct: 10 DSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 69
Query: 62 AFTFGHPNPDDVLDRFL------TGAGAESSLAATTVEDEKLERLKQEYVELLN 109
+ + + + ++R+ + G+ + + A + E +L+Q+ + + N
Sbjct: 70 LYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQES-AKLRQQIISIQN 122
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KI I+R++ ++RQVTFSKR+ G+F KA EL +LC AEV ++I S R + + +
Sbjct: 2 GRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTS 61
Query: 70 PDDVLDRF 77
V+DR+
Sbjct: 62 MKSVIDRY 69
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G ++++KR+E K RQVTFSKR+ GLF KA E+ VLC AEVA+V+ S + F + +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 -PDDVLDRFLTGAGAESSLAA 89
+ +L+R+ + AE L A
Sbjct: 62 CMEKILERYERYSYAERQLIA 82
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G ++++KR+E K RQVTFSKR+ GLF KA E+ VLC AEVA+V+ S + F + +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 -PDDVLDRFLTGAGAESSLAA 89
+ +L+R+ + AE L A
Sbjct: 62 CMEKILERYERYSYAERQLIA 82
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G ++++KR+E K RQVTFSKR+ GLF KA E+ VLC AEVA+V+ S + F + +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 -PDDVLDRFLTGAGAESSLAA 89
+ +L+R+ + AE L A
Sbjct: 62 CMEKILERYERYSYAERQLIA 82
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 10 GLQKIEIKRVERKSARQVTFSKRKKGLFNKASELCVLCGAEVAIVIMSPHKRAFTFGHPN 69
G KIEIKR+E S RQVT+SKR+ G+ KA E+ VLC A V+++I + + F +
Sbjct: 2 GRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTS 61
Query: 70 PDDVLDRF--LTG 80
D+LD++ LTG
Sbjct: 62 LVDILDQYHKLTG 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,558,919
Number of Sequences: 539616
Number of extensions: 3298507
Number of successful extensions: 15693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 15324
Number of HSP's gapped (non-prelim): 527
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)