Query 044795
Match_columns 274
No_of_seqs 123 out of 1184
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:42:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044795.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044795hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4E-65 1.4E-69 470.9 22.8 259 2-264 4-350 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.4E-62 4.9E-67 446.6 19.8 240 18-258 5-308 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 4.4E-63 1.5E-67 450.9 15.9 250 18-271 2-306 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 1.8E-59 6.3E-64 425.9 14.5 243 17-260 2-306 (311)
5 1odm_A Isopenicillin N synthas 100.0 6.9E-57 2.4E-61 412.2 19.3 237 18-260 7-325 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 6.8E-56 2.3E-60 396.8 20.5 221 18-258 2-276 (280)
7 2hbt_A EGL nine homolog 1; pro 95.9 0.071 2.4E-06 45.9 10.8 164 35-222 17-213 (247)
8 3dkq_A PKHD-type hydroxylase S 87.8 1.1 3.8E-05 38.3 6.6 79 125-221 99-194 (243)
9 2rg4_A Uncharacterized protein 85.1 4.1 0.00014 33.9 8.6 43 170-224 166-209 (216)
10 3s57_A Alpha-ketoglutarate-dep 80.2 6 0.00021 32.6 7.7 101 102-219 82-200 (204)
11 2iuw_A Alkylated repair protei 79.9 6.9 0.00024 33.0 8.2 89 121-221 122-229 (238)
12 2fct_A Syringomycin biosynthes 78.0 32 0.0011 29.5 14.6 35 35-70 12-46 (313)
13 3tht_A Alkylated DNA repair pr 73.8 4.9 0.00017 36.1 5.7 96 123-225 196-316 (345)
14 3i3q_A Alpha-ketoglutarate-dep 60.4 13 0.00045 30.8 5.4 80 125-220 105-201 (211)
15 2jig_A Prolyl-4 hydroxylase; h 57.6 14 0.00047 30.5 5.0 88 126-223 99-218 (224)
16 3itq_A Prolyl 4-hydroxylase, a 57.1 17 0.00058 30.2 5.5 158 42-222 37-212 (216)
17 2dbn_A Hypothetical protein YB 51.3 9.7 0.00033 35.4 3.3 58 10-72 95-152 (461)
18 3gja_A CYTC3; halogenase, beta 47.5 1.4E+02 0.0047 25.8 14.1 35 35-70 14-48 (319)
19 3nnf_A CURA; non-HAEM Fe(II)/a 41.4 18 0.00063 31.9 3.3 113 29-152 25-144 (344)
20 1e5r_A Proline oxidase; oxidor 36.5 44 0.0015 29.0 5.0 74 126-220 93-175 (290)
21 4ay7_A Methylcobalamin\: coenz 33.6 34 0.0012 30.1 3.9 37 35-71 308-348 (348)
22 3kt7_A PKHD-type hydroxylase T 26.3 2.6E+02 0.0089 27.0 8.7 157 41-221 31-227 (633)
23 2ww6_A Fibritin, T4 fibritin; 25.4 49 0.0017 17.9 2.1 13 164-176 12-24 (27)
24 1otj_A Alpha-ketoglutarate-dep 23.0 52 0.0018 27.8 3.0 48 19-69 17-64 (283)
25 2a1x_A Phytanoyl-COA dioxygena 22.6 76 0.0026 27.0 4.1 37 35-72 25-61 (308)
26 2rdq_A 1-deoxypentalenic acid 21.3 98 0.0033 25.9 4.5 36 35-71 22-57 (288)
27 1m5a_B Insulin B chain; alpha 21.0 71 0.0024 17.9 2.2 14 35-48 13-26 (30)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4e-65 Score=470.87 Aligned_cols=259 Identities=31% Similarity=0.518 Sum_probs=224.9
Q ss_pred chhhHHHHhcCCccccCcCCccccCCCC-----------------------------CC-C-----CHHHHHHHhHcCce
Q 044795 2 VTATTKLLLSDLASTVKSVLSNYIRPIS-----------------------------DR-P-----NLTEIGQACQHDGF 46 (274)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~vP~~~~~~~~-----------------------------~~-~-----~~~~l~~A~~~~Gf 46 (274)
+++||+|+++++ .+||.+|++|.+ .. + .+++|.+||+++||
T Consensus 4 ~~~v~~l~~~~~----~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GF 79 (356)
T 1gp6_A 4 VERVESLAKSGI----ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGV 79 (356)
T ss_dssp CCCHHHHHHTTC----SSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred cccHHHHHhcCC----CCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCE
Confidence 367999998876 667777776521 10 0 22589999999999
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCC-CCCcccccccCCC-------c-------------------
Q 044795 47 FQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDP-SKSKRLSISFNIN-------T------------------- 99 (274)
Q Consensus 47 f~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~-------~------------------- 99 (274)
|||+||||+.++++++++.+++||+||.|+|+++..... ..++||+...... +
T Consensus 80 F~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP 159 (356)
T 1gp6_A 80 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159 (356)
T ss_dssp EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCC
Confidence 999999999999999999999999999999999987653 4578885432100 0
Q ss_pred h-----HHHHHHHHHHHHh-----------------hHHHHHhc---CCcccceecccCCCCCCCCCCCCCCcCCCCCee
Q 044795 100 E-----KEVVAEYCTSVRG-----------------DYIDKALG---KHGQHMALNYCPPCPQPELTYGLPGHTDPNLIT 154 (274)
Q Consensus 100 ~-----~~~~~~y~~~~~~-----------------~~~~~~~~---~~~~~lrl~~Ypp~~~~~~~~~~~~HtD~~~lT 154 (274)
+ ++.+.+|+++|.+ ++|.+.+. ...+.||++|||||+.++..+|+++|||+|+||
T Consensus 160 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT 239 (356)
T 1gp6_A 160 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT 239 (356)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence 0 1889999999887 67777776 366789999999999888889999999999999
Q ss_pred EEeeCCCCceEEEECCeeeeecCCCCeEEEEechhhHHhhhccccccceeeccCCCCceeEEEEeecCCCCc-eEecCcC
Q 044795 155 VLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWALVNCDKEGISIPTFYCPSPDA-VIAPAKD 233 (274)
Q Consensus 155 ll~qd~~~GLqV~~~g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~~ 233 (274)
||+||+++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.+++.+|||++||++|+.|+ +|.|+++
T Consensus 240 lL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~ 319 (356)
T 1gp6_A 240 FILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE 319 (356)
T ss_dssp EEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred EEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence 999999999999999999999999999999999999999999999999999999889999999999999999 9999999
Q ss_pred ccCcCCCCCCCcccHHHHHHHHHHccCCCCC
Q 044795 234 LIDERHLAFYTNFTYAEYYQKFWNRGLAAEG 264 (274)
Q Consensus 234 ~~~~~~~~~y~~~~~~e~~~~~~~~~~~~~~ 264 (274)
|+++++|++|++++++||+..++++.++++.
T Consensus 320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 320 MVSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp GCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred hcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 9998899999999999999999988776544
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.4e-62 Score=446.59 Aligned_cols=240 Identities=22% Similarity=0.347 Sum_probs=207.6
Q ss_pred CcCCccccCCCCC--CCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCCCCCcccc---
Q 044795 18 KSVLSNYIRPISD--RPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDPSKSKRLS--- 92 (274)
Q Consensus 18 ~~vP~~~~~~~~~--~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~--- 92 (274)
..||.+++..... ...+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ....+||.
T Consensus 5 ~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~~g 83 (312)
T 3oox_A 5 SAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIPFG 83 (312)
T ss_dssp CSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEECCC
T ss_pred CCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccccccc
Confidence 6799999986532 23457999999999999999999999999999999999999999999999875 34466772
Q ss_pred ccc-------------CC----C--------------ch-----HHHHHHHHHHHHh-----------------hHHHHH
Q 044795 93 ISF-------------NI----N--------------TE-----KEVVAEYCTSVRG-----------------DYIDKA 119 (274)
Q Consensus 93 ~~~-------------~~----~--------------~~-----~~~~~~y~~~~~~-----------------~~~~~~ 119 (274)
.+. .. . .+ ++++.+|+++|.+ ++|.+.
T Consensus 84 ~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 163 (312)
T 3oox_A 84 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPT 163 (312)
T ss_dssp CCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHH
T ss_pred ceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 110 00 0 00 1889999999887 566777
Q ss_pred hcCCcccceecccCCCCCCCCCCCCCCcCCCCCeeEEeeCCCCceEEE-ECCeeeeecCCCCeEEEEechhhHHhhhccc
Q 044795 120 LGKHGQHMALNYCPPCPQPELTYGLPGHTDPNLITVLLQDDVPGLQVL-RNGKWLPVSPIPNTFIVNISDQMQVLSNDLY 198 (274)
Q Consensus 120 ~~~~~~~lrl~~Ypp~~~~~~~~~~~~HtD~~~lTll~qd~~~GLqV~-~~g~W~~V~p~~~~~vVnvGd~l~~~TnG~~ 198 (274)
+..+.+.+|++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+||||+|
T Consensus 164 ~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~ 243 (312)
T 3oox_A 164 VQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVL 243 (312)
T ss_dssp HTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSS
T ss_pred hcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCee
Confidence 777778899999999987655599999999999999999999999998 8999999999999999999999999999999
Q ss_pred cccceeeccCC----CCceeEEEEeecCCCCceEecCcCccCcCCCCCCC-cccHHHHHHHHHHc
Q 044795 199 KSVLHWALVNC----DKEGISIPTFYCPSPDAVIAPAKDLIDERHLAFYT-NFTYAEYYQKFWNR 258 (274)
Q Consensus 199 ~a~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~-~~~~~e~~~~~~~~ 258 (274)
||+.|||+.++ +.+|||++||++|+.|++|.|+++|+++++|++|+ +++++||+..+++.
T Consensus 244 kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 244 PSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp CCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred cCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 99999998764 46799999999999999999999999999999999 99999999999875
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.4e-63 Score=450.95 Aligned_cols=250 Identities=30% Similarity=0.601 Sum_probs=211.5
Q ss_pred CcCCccccCCCCC---CCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCCCCCcccccc
Q 044795 18 KSVLSNYIRPISD---RPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDPSKSKRLSIS 94 (274)
Q Consensus 18 ~~vP~~~~~~~~~---~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~ 94 (274)
+.||.|++..... ...+++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ..||+..
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 4699999986531 22447999999999999999999999999999999999999999999997532 1244210
Q ss_pred ------------cC------------CCc-h--HHHHHHHHHHHHh-----------------hHHHHHhcC---Ccccc
Q 044795 95 ------------FN------------INT-E--KEVVAEYCTSVRG-----------------DYIDKALGK---HGQHM 127 (274)
Q Consensus 95 ------------~~------------~~~-~--~~~~~~y~~~~~~-----------------~~~~~~~~~---~~~~l 127 (274)
+. +.. . ++.+.+|+++|.+ ++|.+.+.. ..+.+
T Consensus 78 ~~e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~l 157 (319)
T 1w9y_A 78 QAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGT 157 (319)
T ss_dssp CCCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEE
T ss_pred cccCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCcccee
Confidence 00 000 0 1889999999887 577777753 44679
Q ss_pred eecccCCCCCCCCCCCCCCcCCCCCeeEEeeC-CCCceEEEECCeeeeecCCCCeEEEEechhhHHhhhccccccceeec
Q 044795 128 ALNYCPPCPQPELTYGLPGHTDPNLITVLLQD-DVPGLQVLRNGKWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWAL 206 (274)
Q Consensus 128 rl~~Ypp~~~~~~~~~~~~HtD~~~lTll~qd-~~~GLqV~~~g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~ 206 (274)
|++|||||+.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+
T Consensus 158 rl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv 237 (319)
T 1w9y_A 158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVI 237 (319)
T ss_dssp EEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEC
T ss_pred EEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceec
Confidence 99999999988888999999999999999995 79999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeEEEEeecCCCCceEecCcCccCcC---CCCCCCcccHHHHHHHHHHccCCCCCc-cccccc
Q 044795 207 VNCDKEGISIPTFYCPSPDAVIAPAKDLIDER---HLAFYTNFTYAEYYQKFWNRGLAAEGC-LDLFKA 271 (274)
Q Consensus 207 ~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~---~~~~y~~~~~~e~~~~~~~~~~~~~~~-l~~~~i 271 (274)
.+++.+|||++||++|+.|++|.|+++|++++ +|++|++++++||+..+++..+.++.. ++.+||
T Consensus 238 ~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 238 AQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp CCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred CCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 99889999999999999999999999999887 599999999999999999988877765 677764
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.8e-59 Score=425.86 Aligned_cols=243 Identities=14% Similarity=0.175 Sum_probs=202.3
Q ss_pred cCcCCccccCCCCCCCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCC-HHHHhccCCCCCCCCccccccc
Q 044795 17 VKSVLSNYIRPISDRPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKLL-ESERLKSYSDDPSKSKRLSISF 95 (274)
Q Consensus 17 ~~~vP~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~Gy~~~~ 95 (274)
...||.|++.........++|.+||+++|||||+|||||.++++++++.+++||+|| .|+|+++........+||+...
T Consensus 2 ~~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~ 81 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLE 81 (311)
T ss_dssp CCCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-
T ss_pred CCCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeecc
Confidence 357999999765433344699999999999999999999999999999999999999 9999999886555678995321
Q ss_pred CC----------C---c--------------h--HHHHHHHHHHHHh------hHHHHHhcC-----------Cccccee
Q 044795 96 NI----------N---T--------------E--KEVVAEYCTSVRG------DYIDKALGK-----------HGQHMAL 129 (274)
Q Consensus 96 ~~----------~---~--------------~--~~~~~~y~~~~~~------~~~~~~~~~-----------~~~~lrl 129 (274)
.. . + . .+.+.+|+++|.+ ..+...++- ..+.+|+
T Consensus 82 ~e~~~~~~~~~~~~d~~E~~~~~~~~n~wP~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~~~~lrl 161 (311)
T 1dcs_A 82 SESTAQITNTGSYSDYSMCYSMGTADNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPLLRF 161 (311)
T ss_dssp ----------------CEEEEECSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSCCCEEEE
T ss_pred ccccccccCCCCCCCcceeeeccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhcchhhhe
Confidence 10 0 0 0 1789999999988 333333322 2467999
Q ss_pred cccCCCCCCC--C--CCCCCCcCCCCCeeEEeeC-CCCc---eEEEECCeeeeecCCCCeEEEEechhhHHhhhcccccc
Q 044795 130 NYCPPCPQPE--L--TYGLPGHTDPNLITVLLQD-DVPG---LQVLRNGKWLPVSPIPNTFIVNISDQMQVLSNDLYKSV 201 (274)
Q Consensus 130 ~~Ypp~~~~~--~--~~~~~~HtD~~~lTll~qd-~~~G---LqV~~~g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~ 201 (274)
+|||||+.++ . .+|+++|||+|+||||+|| +++| |||+.+|+|++|+|.||++|||+||+||+||||+|||+
T Consensus 162 ~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~ 241 (311)
T 1dcs_A 162 RYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAP 241 (311)
T ss_dssp EEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCC
T ss_pred ecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCC
Confidence 9999998763 3 6789999999999999999 8999 99999999999999999999999999999999999999
Q ss_pred ceeeccCC-----CCceeEEEEeecCCCCceEecCcCccCcCCCCCC--CcccHHHHHHHHHHccC
Q 044795 202 LHWALVNC-----DKEGISIPTFYCPSPDAVIAPAKDLIDERHLAFY--TNFTYAEYYQKFWNRGL 260 (274)
Q Consensus 202 ~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y--~~~~~~e~~~~~~~~~~ 260 (274)
.|||+.++ +.+|||++||++|+.|++|. +++++++++|++| ++++++||+..++++.+
T Consensus 242 ~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 242 RHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp CEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred CceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 99999987 78999999999999999999 9999988889999 99999999988877654
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=6.9e-57 Score=412.23 Aligned_cols=237 Identities=21% Similarity=0.294 Sum_probs=198.9
Q ss_pred CcCCccccCCCCCC------CCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHH-HhCCHHHHhccCCCC------
Q 044795 18 KSVLSNYIRPISDR------PNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAF-FKLLESERLKSYSDD------ 84 (274)
Q Consensus 18 ~~vP~~~~~~~~~~------~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~------ 84 (274)
..||.|++...... ..+++|.+||+++|||||+|||| +++++++.+++| |+||.|+|+++....
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~~Gy~~~~~ 83 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAIRAYNKEHQ 83 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBCTTTCTTCT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhhcCCCcCCc
Confidence 57999999875332 13479999999999999999999 999999999999 999999999985400
Q ss_pred --------------CCCCccc--ccc-------------c---C--CCc---h--HHHHHHHHHHHHh------------
Q 044795 85 --------------PSKSKRL--SIS-------------F---N--INT---E--KEVVAEYCTSVRG------------ 113 (274)
Q Consensus 85 --------------~~~~~Gy--~~~-------------~---~--~~~---~--~~~~~~y~~~~~~------------ 113 (274)
....++| +.. . + +.. . ++.+.+|+++|.+
T Consensus 84 e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~ 163 (331)
T 1odm_A 84 DQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALA 163 (331)
T ss_dssp TCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111 000 0 0 000 0 1789999999887
Q ss_pred -----hHHHHHhcCCcccce--ecccC------C---CCCCCC-CCCCCCcCCCCCeeEEeeCCCCceEEE-ECCeeeee
Q 044795 114 -----DYIDKALGKHGQHMA--LNYCP------P---CPQPEL-TYGLPGHTDPNLITVLLQDDVPGLQVL-RNGKWLPV 175 (274)
Q Consensus 114 -----~~~~~~~~~~~~~lr--l~~Yp------p---~~~~~~-~~~~~~HtD~~~lTll~qd~~~GLqV~-~~g~W~~V 175 (274)
++|.+.++.+.+.|| ++||| | |+.++. .+|+++|||+|+||||+||+++||||+ ++| |++|
T Consensus 164 Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~g-Wi~V 242 (331)
T 1odm_A 164 LGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-YQDI 242 (331)
T ss_dssp TTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-EEEC
T ss_pred hCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCCC-eEEC
Confidence 456666666678899 99999 7 776665 789999999999999999999999999 788 9999
Q ss_pred cCCCCeEEEEechhhHHhhhccccccceeeccCCCCceeEEEEeecCCCCceEecCcCccCcCCCCCCCcccHHHHHHHH
Q 044795 176 SPIPNTFIVNISDQMQVLSNDLYKSVLHWALVNCDKEGISIPTFYCPSPDAVIAPAKDLIDERHLAFYTNFTYAEYYQKF 255 (274)
Q Consensus 176 ~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~ 255 (274)
+|.||++|||+||+||+||||+|||+.|||+. ++.+|||++||++|+.|++|.|+++++++++ ++|++++++||++.+
T Consensus 243 ~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~ 320 (331)
T 1odm_A 243 EADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNG 320 (331)
T ss_dssp CCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHH
T ss_pred CCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHH
Confidence 99999999999999999999999999999986 4789999999999999999999999998877 899999999999999
Q ss_pred HHccC
Q 044795 256 WNRGL 260 (274)
Q Consensus 256 ~~~~~ 260 (274)
+++.+
T Consensus 321 ~~~~~ 325 (331)
T 1odm_A 321 LVSLI 325 (331)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.8e-56 Score=396.84 Aligned_cols=221 Identities=22% Similarity=0.339 Sum_probs=186.6
Q ss_pred CcCCccccCCCCCCCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCCCCCccccccc-C
Q 044795 18 KSVLSNYIRPISDRPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDPSKSKRLSISF-N 96 (274)
Q Consensus 18 ~~vP~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~-~ 96 (274)
..||.|++... ...++|.+||+++|||||+|||||.++++++++.+++||++ |+|+++.... ...+||.... .
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~~~~GY~~~~~~ 75 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-ETHDGFFPASIS 75 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-TTCCEEECCC--
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-CCCCccccCccc
Confidence 36999999864 24689999999999999999999999999999999999998 7999987653 4578884321 0
Q ss_pred ---------CCch--------------HHHHHHHHHHHHh------hH----------------HHHHhcCCc-ccceec
Q 044795 97 ---------INTE--------------KEVVAEYCTSVRG------DY----------------IDKALGKHG-QHMALN 130 (274)
Q Consensus 97 ---------~~~~--------------~~~~~~y~~~~~~------~~----------------~~~~~~~~~-~~lrl~ 130 (274)
..+| ++++.+|+++|.+ .. |.+.+..+. +.||++
T Consensus 76 e~~~~~~~~D~kE~~~~~p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~ 155 (280)
T 3on7_A 76 ETAKGHTVKDIKEYYHVYPWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRIL 155 (280)
T ss_dssp ------CCCCSCEEEEECTTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEE
T ss_pred cccCCCCcccHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEE
Confidence 0001 1899999999988 11 233343443 789999
Q ss_pred ccCCCCCCC--CCCCCCCcCCCCCeeEEeeCCCCceEEE-ECCeeeeecCCCCeEEEEechhhHHhhhccccccceeecc
Q 044795 131 YCPPCPQPE--LTYGLPGHTDPNLITVLLQDDVPGLQVL-RNGKWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWALV 207 (274)
Q Consensus 131 ~Ypp~~~~~--~~~~~~~HtD~~~lTll~qd~~~GLqV~-~~g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~ 207 (274)
|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+||||+|||+.|||+.
T Consensus 156 ~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~ 235 (280)
T 3on7_A 156 HYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVIN 235 (280)
T ss_dssp EECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEEC
T ss_pred ECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeC
Confidence 999998754 4689999999999999999999999999 7999999999999999999999999999999999999998
Q ss_pred CC----CCceeEEEEeecCCCCceEecCcCccCcCCCCCCCcccHHHHHHHHHHc
Q 044795 208 NC----DKEGISIPTFYCPSPDAVIAPAKDLIDERHLAFYTNFTYAEYYQKFWNR 258 (274)
Q Consensus 208 ~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~ 258 (274)
++ ..+|||++||++|+.|++|.| ++|++||+.++++.
T Consensus 236 ~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 236 PEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp CTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred CCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 74 458999999999999999974 59999999999986
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.85 E-value=0.071 Score=45.86 Aligned_cols=164 Identities=15% Similarity=0.147 Sum_probs=95.5
Q ss_pred HHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCC--------CCC----cccccccCCCchHH
Q 044795 35 TEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDP--------SKS----KRLSISFNINTEKE 102 (274)
Q Consensus 35 ~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~--------~~~----~Gy~~~~~~~~~~~ 102 (274)
+.+..++.+.|++.+.|. ++++.++.+.+.++..-.. ..+..... ... ..|-.... ...+
T Consensus 17 ~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~~-----g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~--~~~~ 88 (247)
T 2hbt_A 17 EYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHDT-----GKFTDGQLVSQKSDSSKDIRGDKITWIEGKE--PGCE 88 (247)
T ss_dssp HTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHHT-----TCSCSCCEEECCSSSTTCEECCEEEEECSCS--TTCH
T ss_pred HHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhhc-----CCccccccccccccccccccccceeeecccc--cchh
Confidence 468889999999998877 9999999999988875311 11111000 000 01100000 0013
Q ss_pred HHHHHHHHHHh--hHHHHHhcCC----cccceecccCCCCCCCCCCCCCCcCCC-----CCeeEEee-CC------CCc-
Q 044795 103 VVAEYCTSVRG--DYIDKALGKH----GQHMALNYCPPCPQPELTYGLPGHTDP-----NLITVLLQ-DD------VPG- 163 (274)
Q Consensus 103 ~~~~y~~~~~~--~~~~~~~~~~----~~~lrl~~Ypp~~~~~~~~~~~~HtD~-----~~lTll~q-d~------~~G- 163 (274)
.+..|.+.|.. ..+...++.. ...+.+.+|++. .-...+|.|. -.+|+++. +. .+|
T Consensus 89 ~~~~l~~~i~~l~~~ln~~lGl~~i~~~~e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~ 163 (247)
T 2hbt_A 89 TIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGI 163 (247)
T ss_dssp HHHHHHHHHHHHHHHTTTTSTTCCEEEECCEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcccccccceEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCcee
Confidence 33345544443 2222222211 234678889861 1235667776 25777775 21 144
Q ss_pred eEEEECC--eeeeecCCCCeEEEEechhhHHhhhccccccceeeccCCCCceeEEEEeecC
Q 044795 164 LQVLRNG--KWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWALVNCDKEGISIPTFYCP 222 (274)
Q Consensus 164 LqV~~~g--~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~~~~~~R~Si~~F~~p 222 (274)
|.+..++ ....|.|..|.+|+.-.+. -.+|.|.. ....|+|++.+++-
T Consensus 164 l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 164 LRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp EEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred EEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-CCCEEEEEEEEEcC
Confidence 7777544 5689999999999887531 16899976 56799999887764
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=87.75 E-value=1.1 Score=38.25 Aligned_cols=79 Identities=13% Similarity=0.004 Sum_probs=54.0
Q ss_pred ccceecccCCCCCCCCCCCCCCcCCCC-----------CeeEEee--C--C-C-CceEEEECCeeeeecCCCCeEEEEec
Q 044795 125 QHMALNYCPPCPQPELTYGLPGHTDPN-----------LITVLLQ--D--D-V-PGLQVLRNGKWLPVSPIPNTFIVNIS 187 (274)
Q Consensus 125 ~~lrl~~Ypp~~~~~~~~~~~~HtD~~-----------~lTll~q--d--~-~-~GLqV~~~g~W~~V~p~~~~~vVnvG 187 (274)
..+++++|.+.. -..+|.|.. .+|+++. + . . +.|.+.....-..|+|..|.+++.-.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 348889997742 256677652 4566654 3 1 2 33666655445789999999998753
Q ss_pred hhhHHhhhccccccceeeccCCCCceeEEEEeec
Q 044795 188 DQMQVLSNDLYKSVLHWALVNCDKEGISIPTFYC 221 (274)
Q Consensus 188 d~l~~~TnG~~~a~~HRV~~~~~~~R~Si~~F~~ 221 (274)
.++|+|.......|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689998655578999998876
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=85.10 E-value=4.1 Score=33.89 Aligned_cols=43 Identities=19% Similarity=0.170 Sum_probs=33.5
Q ss_pred CeeeeecCCCCeEEEEechhhHHhhhccccccceeeccCC-CCceeEEEEeecCCC
Q 044795 170 GKWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWALVNC-DKEGISIPTFYCPSP 224 (274)
Q Consensus 170 g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~~~-~~~R~Si~~F~~p~~ 224 (274)
..+..|.|.+|.+||.-+. -.|.|.... +.+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3566889999999998774 389998754 468999999988765
No 10
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=80.19 E-value=6 Score=32.58 Aligned_cols=101 Identities=8% Similarity=0.004 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhHHHHHhcCCcccceecccCCCCCCCCCCCCCCcCCCC--------CeeEEeeCCCCceEEEEC----
Q 044795 102 EVVAEYCTSVRGDYIDKALGKHGQHMALNYCPPCPQPELTYGLPGHTDPN--------LITVLLQDDVPGLQVLRN---- 169 (274)
Q Consensus 102 ~~~~~y~~~~~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~~~~~HtD~~--------~lTll~qd~~~GLqV~~~---- 169 (274)
+.+....+.+. +.++......-+|+|.+.. -++++|.|-. +.++-+. ...=+.+...
T Consensus 82 ~~L~~l~~~~~-----~~~g~~~n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~ 150 (204)
T 3s57_A 82 PVLERIRDHVS-----GVTGQTFNFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRG 150 (204)
T ss_dssp HHHHHHHHHHH-----HHHCCCCSEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCS
T ss_pred HHHHHHHHHHH-----HHhCCCCceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCc
Confidence 44555444432 2334444456689998743 2588898862 2233332 1122344421
Q ss_pred ------CeeeeecCCCCeEEEEechhhHHhhhccccccceeeccCCCCceeEEEEe
Q 044795 170 ------GKWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWALVNCDKEGISIPTF 219 (274)
Q Consensus 170 ------g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~~~~~~R~Si~~F 219 (274)
+..+.+...+|+++|.-|+.=..|..+.-+.. .....|+|+.|-
T Consensus 151 ~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~------~~~~~RislTFR 200 (204)
T 3s57_A 151 KSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRK------KVLAPRVNLTFR 200 (204)
T ss_dssp SSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCT------TCCSCEEEEEEE
T ss_pred cccccCCceEEEECCCCCEEEECchhhheeEeeccccC------CCCCCEEEEEee
Confidence 25688889999999999988777764432211 124689999884
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=79.91 E-value=6.9 Score=33.00 Aligned_cols=89 Identities=7% Similarity=0.045 Sum_probs=56.5
Q ss_pred cCCcccceecccCCCCCCCCCCCCCCcCCCC--------CeeEEeeCCCCceEEEE-C----------CeeeeecCCCCe
Q 044795 121 GKHGQHMALNYCPPCPQPELTYGLPGHTDPN--------LITVLLQDDVPGLQVLR-N----------GKWLPVSPIPNT 181 (274)
Q Consensus 121 ~~~~~~lrl~~Ypp~~~~~~~~~~~~HtD~~--------~lTll~qd~~~GLqV~~-~----------g~W~~V~p~~~~ 181 (274)
+......-+|+|++.. -++++|.|-. +.|+-+.. ..=+.+.. . +..+.+...+|+
T Consensus 122 g~~~n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gs 195 (238)
T 2iuw_A 122 GHTFNSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGT 195 (238)
T ss_dssp SCCCCEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTC
T ss_pred CCCCCEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCC
Confidence 3334456789998743 2588999852 23333321 12234432 1 368899999999
Q ss_pred EEEEechhhHHhhhccccccceeeccCCCCceeEEEEeec
Q 044795 182 FIVNISDQMQVLSNDLYKSVLHWALVNCDKEGISIPTFYC 221 (274)
Q Consensus 182 ~vVnvGd~l~~~TnG~~~a~~HRV~~~~~~~R~Si~~F~~ 221 (274)
++|.-|+.=..|..|.-+.. .....|+|+.|=..
T Consensus 196 llvM~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 196 LLIMEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EEEEEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred EEEEChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 99999998777765554321 13578999998654
No 12
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=78.05 E-value=32 Score=29.49 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=29.2
Q ss_pred HHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHH
Q 044795 35 TEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFF 70 (274)
Q Consensus 35 ~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 70 (274)
++..+.+++.||+.|.|- ++.+.++++.+.+.+..
T Consensus 12 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~l 46 (313)
T 2fct_A 12 AEQRASFEKNGFIGPFDA-YSPEEMKETWKRTRLRL 46 (313)
T ss_dssp HHHHHHHHHHSEEEEEES-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEECCCC-CCHHHHHHHHHHHHHHH
Confidence 467789999999999997 79999999887776544
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=73.79 E-value=4.9 Score=36.09 Aligned_cols=96 Identities=14% Similarity=0.167 Sum_probs=62.7
Q ss_pred CcccceecccCCCCCCCCCCCCCCcCCCC------CeeEEeeCCCCceEEE-ECCeeeeecCCCCeEEEEechhhHHhhh
Q 044795 123 HGQHMALNYCPPCPQPELTYGLPGHTDPN------LITVLLQDDVPGLQVL-RNGKWLPVSPIPNTFIVNISDQMQVLSN 195 (274)
Q Consensus 123 ~~~~lrl~~Ypp~~~~~~~~~~~~HtD~~------~lTll~qd~~~GLqV~-~~g~W~~V~p~~~~~vVnvGd~l~~~Tn 195 (274)
.....-+|+|.+. .++++|.|-. +.|+-+ ....=+.+. +++.++.+...+|+++|.-|+.-..|..
T Consensus 196 ~~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 196 KPDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CCSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCCEEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 3345678888762 2689999884 223333 122224444 4577999999999999999999999987
Q ss_pred ccccccceeecc------------------CCCCceeEEEEeecCCCC
Q 044795 196 DLYKSVLHWALV------------------NCDKEGISIPTFYCPSPD 225 (274)
Q Consensus 196 G~~~a~~HRV~~------------------~~~~~R~Si~~F~~p~~d 225 (274)
|.-+-...-+-. .....|+|+.|=..+...
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~ 316 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTP 316 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSC
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCC
Confidence 765543333211 013469999998776653
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=60.42 E-value=13 Score=30.75 Aligned_cols=80 Identities=14% Similarity=-0.008 Sum_probs=50.0
Q ss_pred ccceecccCCCCCCCCCCCCCCcCCC-----C--CeeEEeeCCCCceEEEE---CCeeeeecCCCCeEEEEechhhHHhh
Q 044795 125 QHMALNYCPPCPQPELTYGLPGHTDP-----N--LITVLLQDDVPGLQVLR---NGKWLPVSPIPNTFIVNISDQMQVLS 194 (274)
Q Consensus 125 ~~lrl~~Ypp~~~~~~~~~~~~HtD~-----~--~lTll~qd~~~GLqV~~---~g~W~~V~p~~~~~vVnvGd~l~~~T 194 (274)
...-+|+|.+. . ++++|.|- + ++++-+. ...=+.+.. .+....+...+|+++|.-|+.- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~- 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF- 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC-
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce-
Confidence 44668889762 2 68999993 2 2233332 112234432 3678889999999999988762 23
Q ss_pred hccccccceeeccCC-------CCceeEEEEee
Q 044795 195 NDLYKSVLHWALVNC-------DKEGISIPTFY 220 (274)
Q Consensus 195 nG~~~a~~HRV~~~~-------~~~R~Si~~F~ 220 (274)
.|.|.... +..|+|+.|-.
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 46665432 24699999864
No 15
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=57.55 E-value=14 Score=30.52 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=54.9
Q ss_pred cceecccCCCCCCCCCCCCCCcCCC--------------CCeeEEee--C-CCCc-eEEEECC-------------eeee
Q 044795 126 HMALNYCPPCPQPELTYGLPGHTDP--------------NLITVLLQ--D-DVPG-LQVLRNG-------------KWLP 174 (274)
Q Consensus 126 ~lrl~~Ypp~~~~~~~~~~~~HtD~--------------~~lTll~q--d-~~~G-LqV~~~g-------------~W~~ 174 (274)
.+++.+|.+... ..+|.|. ..+|+++. | ..+| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~~------y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQK------YEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTCC------EEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCcc------ccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 488889976322 4556664 24777765 2 2344 4443211 2478
Q ss_pred ecCCCCeEEEEechhhHHhhhccc-cccceeeccCCCCceeEEEEeecCC
Q 044795 175 VSPIPNTFIVNISDQMQVLSNDLY-KSVLHWALVNCDKEGISIPTFYCPS 223 (274)
Q Consensus 175 V~p~~~~~vVnvGd~l~~~TnG~~-~a~~HRV~~~~~~~R~Si~~F~~p~ 223 (274)
|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999887643 1123322 5789999865556899998887644
No 16
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=57.12 E-value=17 Score=30.16 Aligned_cols=158 Identities=13% Similarity=0.088 Sum_probs=82.4
Q ss_pred HcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCCCCCcccccccCCCchHHHHHHHHHHHHhhHHHHHhc
Q 044795 42 QHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDPSKSKRLSISFNINTEKEVVAEYCTSVRGDYIDKALG 121 (274)
Q Consensus 42 ~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 121 (274)
.+-..+++.|. ++++.++.+.+.++.-|....=-.. ... ...+. +....... .+.+..+.+.+.. +++
T Consensus 37 ~~P~i~~~~~f-Ls~~Ec~~Li~~a~~~l~~s~v~~~---~~~-~~~Rt-S~~~wl~~-~~~v~~i~~Ri~~-----~~g 104 (216)
T 3itq_A 37 EEPLIVVLGNV-LSDEECDELIELSKSKLARSKVGSS---RDV-NDIRT-SSGAFLDD-NELTAKIEKRISS-----IMN 104 (216)
T ss_dssp TTTTEEEEESC-SCHHHHHHHHHHHHHHHC-----------CC-CCGGG-TTCEECCC-CHHHHHHHHHHHH-----HHT
T ss_pred CCCCEEEECCc-CCHHHHHHHHHHhhcccccceeccC---Ccc-CCcEe-eeeEEeCC-cHHHHHHHHHHHH-----hcC
Confidence 34445555555 9999999999999865432110000 000 00000 00000001 1444444444433 222
Q ss_pred C---CcccceecccCCCCCCCCCCCCCCcCCCC-----------CeeEEee--C-CCCceEEEECCeeeeecCCCCeEEE
Q 044795 122 K---HGQHMALNYCPPCPQPELTYGLPGHTDPN-----------LITVLLQ--D-DVPGLQVLRNGKWLPVSPIPNTFIV 184 (274)
Q Consensus 122 ~---~~~~lrl~~Ypp~~~~~~~~~~~~HtD~~-----------~lTll~q--d-~~~GLqV~~~g~W~~V~p~~~~~vV 184 (274)
- ..-.+++.+|.+... ..+|.|+. .+|+++. | ..+|=-+.++. -+.|.|..|.+++
T Consensus 105 l~~~~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~ 177 (216)
T 3itq_A 105 VPASHGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVY 177 (216)
T ss_dssp SCGGGBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEE
T ss_pred ceeccccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEE
Confidence 1 223588999976432 45677753 3677775 2 23342233221 3678999999887
Q ss_pred EechhhHHhhhcc-ccccceeeccCCCCceeEEEEeecC
Q 044795 185 NISDQMQVLSNDL-YKSVLHWALVNCDKEGISIPTFYCP 222 (274)
Q Consensus 185 nvGd~l~~~TnG~-~~a~~HRV~~~~~~~R~Si~~F~~p 222 (274)
.-.-. .+|. -..++|+|.......|+++..+++-
T Consensus 178 f~~~~----~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 178 FEYFY----QDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EECCC----SSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred EeccC----CCCCCCCccccccceeccccEEEEEeeEec
Confidence 65311 1221 2468999986555689998887763
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=51.33 E-value=9.7 Score=35.41 Aligned_cols=58 Identities=10% Similarity=-0.021 Sum_probs=46.8
Q ss_pred hcCCccccCcCCccccCCCCCCCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhC
Q 044795 10 LSDLASTVKSVLSNYIRPISDRPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKL 72 (274)
Q Consensus 10 ~~~~~~~~~~vP~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~l 72 (274)
..|- .-||.+..........-++..+.+++.|++.|.|. ||.+...+..+.+.+|.+.
T Consensus 95 ~~G~----~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 95 AQGD----AVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp HTTC----CSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred hcCC----CCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 5666 78999988765444333578899999999999998 9999999999999999754
No 18
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=47.48 E-value=1.4e+02 Score=25.81 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=28.8
Q ss_pred HHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHH
Q 044795 35 TEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFF 70 (274)
Q Consensus 35 ~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 70 (274)
++-.+.+++.||+.|.+- ++.+.++++.+.....+
T Consensus 14 ~eq~~~f~~~Gyv~i~~~-l~~~~v~~l~~~i~~~l 48 (319)
T 3gja_A 14 PEEVARFERDGYIGPVKI-FEPEEMTRRWNIIRRQL 48 (319)
T ss_dssp HHHHHHHHHHSEEEEEES-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEECcCC-CCHHHHHHHHHHHHHHh
Confidence 466788999999999887 88888998888877644
No 19
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=41.41 E-value=18 Score=31.90 Aligned_cols=113 Identities=18% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCCCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCC--CCCcccccccCCCchHHHHHH
Q 044795 29 SDRPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDP--SKSKRLSISFNINTEKEVVAE 106 (274)
Q Consensus 29 ~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~--~~~~Gy~~~~~~~~~~~~~~~ 106 (274)
-++..+++|.+-+++-||+.|.|- .+++.++.+.+..+..-.-+.-.|.+.....+ ..-+ .......+....
T Consensus 25 l~~~qve~~~~~fE~eGYLvlk~v-Fs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lr-----s~~H~~~~f~~h 98 (344)
T 3nnf_A 25 MNREQVEQLKQEYEEKGYCQIKKI-FDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDID-----TNDHAYDLVKYD 98 (344)
T ss_dssp CCSHHHHHHHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCB-----CSEEEECSSCHH
T ss_pred CCHHHHHHHHhhhccCceEEEcCC-CCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchh-----cccccchhHHHH
Confidence 355566788889999999999998 56677777777776664322222222221100 0011 000000022334
Q ss_pred HHHHHHh---hHHHHHhcCCcc--cceecccCCCCCCCCCCCCCCcCCCCC
Q 044795 107 YCTSVRG---DYIDKALGKHGQ--HMALNYCPPCPQPELTYGLPGHTDPNL 152 (274)
Q Consensus 107 y~~~~~~---~~~~~~~~~~~~--~lrl~~Ypp~~~~~~~~~~~~HtD~~~ 152 (274)
|...+.. +.+..+++.... .-+...++|. ..|+.+|.|+..
T Consensus 99 ~~s~l~~rll~vl~~LlG~el~i~qs~~fe~kPG-----~KGFpWH~D~~~ 144 (344)
T 3nnf_A 99 FVSSFIQEKLALLNYITGKNLMIMHNALFSVEPN-----HKGLPWHVGVGS 144 (344)
T ss_dssp HHHHHHGGGHHHHHHHHTSCEEEEEEEEEEECBT-----CCBSCSBCTTTT
T ss_pred HHHHHHHHHHHHHHHHhCCceeeeecceEeeCCC-----CCCCCceecccc
Confidence 4334333 666777766432 2444555553 568999999763
No 20
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=36.48 E-value=44 Score=29.04 Aligned_cols=74 Identities=11% Similarity=0.068 Sum_probs=48.8
Q ss_pred cceecccCCCCCCCCCCCCCCcCCC--------CCeeEEee-CCCCceEEEECCeeeeecCCCCeEEEEechhhHHhhhc
Q 044795 126 HMALNYCPPCPQPELTYGLPGHTDP--------NLITVLLQ-DDVPGLQVLRNGKWLPVSPIPNTFIVNISDQMQVLSND 196 (274)
Q Consensus 126 ~lrl~~Ypp~~~~~~~~~~~~HtD~--------~~lTll~q-d~~~GLqV~~~g~W~~V~p~~~~~vVnvGd~l~~~TnG 196 (274)
..|+ .-+|.. .+.+|.|. +.+-++.+ ...+|..+.-+|+-+..++ ..+.++|
T Consensus 93 ~vRl-rL~PG~------~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d----------- 153 (290)
T 1e5r_A 93 MARS-RNLKNA------IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLD----------- 153 (290)
T ss_dssp EEEE-EEEESE------EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECC-----------
T ss_pred eEEE-EeCCCC------EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEc-----------
Confidence 3555 555532 37899998 34555554 2467777777776666665 2233333
Q ss_pred cccccceeeccCCCCceeEEEEee
Q 044795 197 LYKSVLHWALVNCDKEGISIPTFY 220 (274)
Q Consensus 197 ~~~a~~HRV~~~~~~~R~Si~~F~ 220 (274)
-+..|.|.+.+..+|+.+.+=+
T Consensus 154 --~~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 154 --AATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp --TTSCEEEEESSSSCCCEEEEEE
T ss_pred --CCCeeEEEcCCCCCeEEEEEEe
Confidence 2358999999999999998755
No 21
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=33.57 E-value=34 Score=30.07 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=30.5
Q ss_pred HHHHHHhHcCceEEEEcCCCCH----HHHHHHHHHHHHHHh
Q 044795 35 TEIGQACQHDGFFQVKNHGIPE----TIINNMLSISRAFFK 71 (274)
Q Consensus 35 ~~l~~A~~~~Gff~l~nhGi~~----~~~~~~~~~~~~fF~ 71 (274)
+++.++++.-||+.=.+|||++ +-+..+.+++++|++
T Consensus 308 ~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 308 AEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 5677778888887777898765 889999999999974
No 22
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=26.30 E-value=2.6e+02 Score=26.97 Aligned_cols=157 Identities=13% Similarity=0.084 Sum_probs=85.8
Q ss_pred hHcCceEEEEcCCCCHHHHHHHHHHHHHHHhCCHHHHhccCCCCCCCCccccc----ccCC-Cch----HHHHHHHHHHH
Q 044795 41 CQHDGFFQVKNHGIPETIINNMLSISRAFFKLLESERLKSYSDDPSKSKRLSI----SFNI-NTE----KEVVAEYCTSV 111 (274)
Q Consensus 41 ~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~----~~~~-~~~----~~~~~~y~~~~ 111 (274)
.+-+-++.|.|. ++.++++++.+.... +..+......-+.=|.. +... ..+ ...+..+...+
T Consensus 31 s~PFpH~VIdnf-l~d~lle~V~~Efp~--------~i~f~~KetDlYk~~QsgdLanl~~l~~e~l~~lp~l~~Lr~~L 101 (633)
T 3kt7_A 31 SQPYNWGTIHEL-VNDDLLRAVRKEIET--------EIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQIL 101 (633)
T ss_dssp CSSSCCEEESSC-BCHHHHHHHHHHHHH--------HCCCEEEECSSEEEEECCCTTCTTSCCTTCCTTCHHHHHHHHHH
T ss_pred CCCcceEEECCC-CCHHHHHHHHHHhhh--------ccCcccccccccceeccccccccccCChhhhccChHHHHHHHHH
Confidence 456777888886 788877777765542 11111110000111111 0000 000 16777777777
Q ss_pred Hh----hHHHHHhcC-C----cccceecccCCCCCCCCCCCCCCcCCC-C--CeeEEee--C--------CCCceEEEE-
Q 044795 112 RG----DYIDKALGK-H----GQHMALNYCPPCPQPELTYGLPGHTDP-N--LITVLLQ--D--------DVPGLQVLR- 168 (274)
Q Consensus 112 ~~----~~~~~~~~~-~----~~~lrl~~Ypp~~~~~~~~~~~~HtD~-~--~lTll~q--d--------~~~GLqV~~- 168 (274)
.. +++.+.++- . ...+.+.+|++.. ....|.|. + .+|+++. + ..+.|+++.
T Consensus 102 ~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~ 175 (633)
T 3kt7_A 102 YSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPS 175 (633)
T ss_dssp TSHHHHHHHHHHHTCCCCCSSCCCEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCE
T ss_pred hcHHHHHHHHHHhCCcccCCCceeEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecC
Confidence 76 455555543 1 2346678887532 26778884 2 3555553 1 134488872
Q ss_pred C-------CeeeeecCCCCeEEEEechhhHHhhhccccccceeeccC-CCCceeEEEEeec
Q 044795 169 N-------GKWLPVSPIPNTFIVNISDQMQVLSNDLYKSVLHWALVN-CDKEGISIPTFYC 221 (274)
Q Consensus 169 ~-------g~W~~V~p~~~~~vVnvGd~l~~~TnG~~~a~~HRV~~~-~~~~R~Si~~F~~ 221 (274)
+ .....|.|..|.+++..-.- + .+.|.|... ++..|+||+-.++
T Consensus 176 d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 176 ILPNVPHSDPSAKLVPQFNQIAFFKVLP------G---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp EETTEECSSCSEEECCCTTEEEEEECCT------T---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred CCcCCCCCCceEEEecCCCeEEEEEcCC------C---CCcCCCCccCCCCCEEEEEEEec
Confidence 2 24667899999999875310 1 357876432 2789999976655
No 23
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=25.41 E-value=49 Score=17.91 Aligned_cols=13 Identities=31% Similarity=0.601 Sum_probs=10.2
Q ss_pred eEEEECCeeeeec
Q 044795 164 LQVLRNGKWLPVS 176 (274)
Q Consensus 164 LqV~~~g~W~~V~ 176 (274)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4677999999764
No 24
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=22.98 E-value=52 Score=27.79 Aligned_cols=48 Identities=6% Similarity=0.116 Sum_probs=33.5
Q ss_pred cCCccccCCCCCCCCHHHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHH
Q 044795 19 SVLSNYIRPISDRPNLTEIGQACQHDGFFQVKNHGIPETIINNMLSISRAF 69 (274)
Q Consensus 19 ~vP~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f 69 (274)
.|+.+.+...-++...++|.+++.++|++.+.|..++.+.. .+.++.|
T Consensus 17 ei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~ 64 (283)
T 1otj_A 17 QISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRF 64 (283)
T ss_dssp EEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTT
T ss_pred EEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHh
Confidence 46666655433445568999999999999999998876543 3444444
No 25
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=22.62 E-value=76 Score=27.01 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=32.1
Q ss_pred HHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHhC
Q 044795 35 TEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFKL 72 (274)
Q Consensus 35 ~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~l 72 (274)
++..+.+++.||+.|.|- ++.+.++++.+...++++.
T Consensus 25 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 61 (308)
T 2a1x_A 25 LEQRKFYEENGFLVIKNL-VPDADIQRFRNEFEKICRK 61 (308)
T ss_dssp STHHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCEEEccCC-CCHHHHHHHHHHHHHHHhc
Confidence 467789999999999987 8999999999999888753
No 26
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=21.26 E-value=98 Score=25.87 Aligned_cols=36 Identities=8% Similarity=0.257 Sum_probs=31.9
Q ss_pred HHHHHHhHcCceEEEEcCCCCHHHHHHHHHHHHHHHh
Q 044795 35 TEIGQACQHDGFFQVKNHGIPETIINNMLSISRAFFK 71 (274)
Q Consensus 35 ~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 71 (274)
+++.+.+++.||+.|.|- ++.+.++++.+.+.+.++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 578999999999999987 899999999998888764
No 27
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=20.96 E-value=71 Score=17.85 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=12.0
Q ss_pred HHHHHHhHcCceEE
Q 044795 35 TEIGQACQHDGFFQ 48 (274)
Q Consensus 35 ~~l~~A~~~~Gff~ 48 (274)
+.|.-.|.+-|||+
T Consensus 13 daL~~vCgdRGF~~ 26 (30)
T 1m5a_B 13 EALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHGGGCEEE
T ss_pred HHHHHHhccCcccc
Confidence 56777899999998
Done!