Query 044796
Match_columns 186
No_of_seqs 250 out of 1305
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 11:43:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044796.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044796hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtx_A MAMA; tetratricopeptide 100.0 1.8E-28 6.2E-33 162.5 11.1 169 4-177 3-172 (184)
2 2pl2_A Hypothetical conserved 99.9 2.5E-26 8.6E-31 156.3 11.9 167 5-177 4-182 (217)
3 4gyw_A UDP-N-acetylglucosamine 99.9 5.6E-26 1.9E-30 177.7 15.1 166 3-173 6-172 (723)
4 4gco_A Protein STI-1; structur 99.9 2.9E-25 1E-29 138.7 15.2 115 4-151 11-125 (126)
5 2pl2_A Hypothetical conserved 99.9 3.7E-25 1.3E-29 150.5 12.6 163 4-172 37-211 (217)
6 4i17_A Hypothetical protein; T 99.9 3.8E-24 1.3E-28 146.2 12.2 173 5-177 6-211 (228)
7 2h6f_A Protein farnesyltransfe 99.9 1.6E-24 5.4E-29 158.6 10.3 167 4-175 95-269 (382)
8 3urz_A Uncharacterized protein 99.9 3.4E-23 1.2E-27 140.0 15.1 157 5-178 3-189 (208)
9 4ga2_A E3 SUMO-protein ligase 99.9 2.1E-24 7E-29 138.8 8.7 127 12-176 3-132 (150)
10 2hr2_A Hypothetical protein; a 99.9 8.1E-23 2.8E-27 130.4 11.9 130 3-153 8-148 (159)
11 4ga2_A E3 SUMO-protein ligase 99.9 2.9E-22 9.7E-27 128.7 12.5 117 4-153 29-146 (150)
12 3rkv_A Putative peptidylprolyl 99.9 1.9E-21 6.5E-26 126.3 15.8 131 2-155 7-146 (162)
13 2h6f_A Protein farnesyltransfe 99.9 9.9E-23 3.4E-27 149.1 10.6 164 4-172 129-302 (382)
14 3qky_A Outer membrane assembly 99.9 2.1E-22 7.2E-27 140.3 11.5 171 4-174 13-223 (261)
15 3uq3_A Heat shock protein STI1 99.9 9.6E-22 3.3E-26 135.8 14.4 164 4-173 3-200 (258)
16 3upv_A Heat shock protein STI1 99.9 2.5E-21 8.5E-26 120.5 14.8 117 4-153 2-124 (126)
17 4abn_A Tetratricopeptide repea 99.9 8.8E-23 3E-27 153.6 9.7 161 5-175 101-287 (474)
18 3gyz_A Chaperone protein IPGC; 99.9 2.3E-21 7.9E-26 124.4 14.8 105 4-141 34-138 (151)
19 3gyz_A Chaperone protein IPGC; 99.9 3.2E-23 1.1E-27 133.0 6.1 99 72-175 35-133 (151)
20 1w3b_A UDP-N-acetylglucosamine 99.9 5.1E-22 1.7E-26 145.4 12.7 164 5-173 66-230 (388)
21 2q7f_A YRRB protein; TPR, prot 99.9 9.3E-22 3.2E-26 135.0 13.2 167 5-176 56-223 (243)
22 1w3b_A UDP-N-acetylglucosamine 99.9 1.1E-21 3.9E-26 143.6 14.4 163 6-173 169-332 (388)
23 4eqf_A PEX5-related protein; a 99.9 7E-22 2.4E-26 143.5 13.0 164 5-173 98-308 (365)
24 3as5_A MAMA; tetratricopeptide 99.9 6.9E-22 2.4E-26 130.0 11.8 165 4-173 6-171 (186)
25 3uq3_A Heat shock protein STI1 99.9 4.3E-22 1.5E-26 137.6 11.1 163 6-173 38-234 (258)
26 2vq2_A PILW, putative fimbrial 99.9 1.6E-21 5.6E-26 132.1 13.0 165 4-173 6-174 (225)
27 4abn_A Tetratricopeptide repea 99.9 1.8E-21 6.2E-26 146.4 12.5 161 5-171 136-317 (474)
28 4gco_A Protein STI-1; structur 99.9 2.5E-21 8.4E-26 120.8 11.0 105 70-179 10-114 (126)
29 4eqf_A PEX5-related protein; a 99.9 2.4E-21 8.3E-26 140.7 12.5 165 6-175 65-276 (365)
30 4gcn_A Protein STI-1; structur 99.9 1.6E-20 5.4E-25 117.3 14.5 110 4-147 6-122 (127)
31 3u4t_A TPR repeat-containing p 99.9 2.8E-21 9.6E-26 134.8 12.3 165 6-176 3-172 (272)
32 2ho1_A Type 4 fimbrial biogene 99.9 3.3E-21 1.1E-25 133.2 12.4 163 6-173 71-236 (252)
33 3qou_A Protein YBBN; thioredox 99.9 1.3E-20 4.4E-25 133.2 15.7 164 5-173 116-282 (287)
34 2ho1_A Type 4 fimbrial biogene 99.9 9.3E-21 3.2E-25 130.9 14.6 169 5-178 36-207 (252)
35 2q7f_A YRRB protein; TPR, prot 99.9 6.9E-22 2.4E-26 135.6 8.7 166 5-175 22-188 (243)
36 3ieg_A DNAJ homolog subfamily 99.9 7.2E-21 2.5E-25 137.1 14.3 89 80-173 127-215 (359)
37 2r5s_A Uncharacterized protein 99.9 5.2E-21 1.8E-25 125.9 12.1 162 6-173 6-171 (176)
38 3hym_B Cell division cycle pro 99.9 3.9E-21 1.3E-25 137.2 12.4 168 6-178 125-302 (330)
39 3sz7_A HSC70 cochaperone (SGT) 99.9 3.6E-20 1.2E-24 120.4 15.8 121 3-156 8-130 (164)
40 2vgx_A Chaperone SYCD; alterna 99.9 2.4E-20 8.1E-25 119.5 14.6 117 4-153 19-135 (148)
41 1a17_A Serine/threonine protei 99.9 3.2E-20 1.1E-24 120.3 15.4 132 3-172 10-143 (166)
42 1fch_A Peroxisomal targeting s 99.9 5.5E-21 1.9E-25 138.6 12.4 164 5-173 97-312 (368)
43 3vtx_A MAMA; tetratricopeptide 99.9 4.4E-21 1.5E-25 126.8 10.7 139 4-142 37-176 (184)
44 2xcb_A PCRH, regulatory protei 99.9 3.9E-20 1.3E-24 117.6 14.7 117 4-153 16-132 (142)
45 1p5q_A FKBP52, FK506-binding p 99.9 3.4E-20 1.2E-24 133.8 15.2 135 4-156 145-279 (336)
46 3ieg_A DNAJ homolog subfamily 99.8 2.3E-20 7.8E-25 134.5 14.0 169 5-178 2-186 (359)
47 3hym_B Cell division cycle pro 99.8 9.6E-21 3.3E-25 135.2 10.8 162 7-173 91-263 (330)
48 2yhc_A BAMD, UPF0169 lipoprote 99.8 1.6E-20 5.4E-25 128.3 11.2 165 5-175 3-213 (225)
49 2fbn_A 70 kDa peptidylprolyl i 99.8 2.3E-19 7.9E-24 120.1 16.5 138 3-157 35-172 (198)
50 2vq2_A PILW, putative fimbrial 99.8 4.6E-20 1.6E-24 124.9 13.1 167 5-176 41-214 (225)
51 2vyi_A SGTA protein; chaperone 99.8 5.3E-19 1.8E-23 109.8 16.9 118 3-153 9-126 (131)
52 2fo7_A Synthetic consensus TPR 99.8 9.7E-20 3.3E-24 113.6 13.2 131 7-175 2-132 (136)
53 2lni_A Stress-induced-phosphop 99.8 1.8E-19 6.3E-24 112.4 14.3 118 4-154 14-131 (133)
54 2pzi_A Probable serine/threoni 99.8 2E-21 6.9E-26 151.9 6.4 157 17-179 402-567 (681)
55 3cv0_A Peroxisome targeting si 99.8 3.6E-20 1.2E-24 132.1 12.4 97 72-173 171-267 (327)
56 2vgx_A Chaperone SYCD; alterna 99.8 5.5E-21 1.9E-25 122.4 7.0 97 72-173 20-116 (148)
57 1fch_A Peroxisomal targeting s 99.8 6.6E-20 2.3E-24 132.9 13.3 166 6-176 64-281 (368)
58 2y4t_A DNAJ homolog subfamily 99.8 8.2E-20 2.8E-24 135.8 14.1 165 4-173 24-204 (450)
59 1elw_A TPR1-domain of HOP; HOP 99.8 7.1E-19 2.4E-23 107.4 16.0 115 4-151 2-116 (118)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.8 1.7E-19 5.7E-24 121.7 14.2 134 3-177 3-152 (213)
61 4i17_A Hypothetical protein; T 99.8 6.1E-20 2.1E-24 125.3 11.8 146 6-151 42-224 (228)
62 1hxi_A PEX5, peroxisome target 99.8 1.5E-19 5.2E-24 111.8 11.7 101 8-141 19-119 (121)
63 1wao_1 Serine/threonine protei 99.8 5.2E-20 1.8E-24 138.5 11.1 130 3-170 3-134 (477)
64 3fp2_A TPR repeat-containing p 99.8 6E-20 2E-24 139.3 11.4 163 5-173 242-405 (537)
65 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 3E-19 1E-23 133.8 14.9 136 4-157 266-401 (457)
66 1xnf_A Lipoprotein NLPI; TPR, 99.8 3E-19 1E-23 124.5 14.0 170 4-179 41-248 (275)
67 2y4t_A DNAJ homolog subfamily 99.8 1.2E-19 3.9E-24 135.0 12.4 167 6-177 177-360 (450)
68 3u4t_A TPR repeat-containing p 99.8 8.9E-20 3E-24 127.2 10.7 162 7-173 75-248 (272)
69 2xpi_A Anaphase-promoting comp 99.8 2.3E-19 8E-24 137.8 13.2 164 6-174 407-578 (597)
70 3q49_B STIP1 homology and U bo 99.8 1.4E-18 4.9E-23 109.2 14.6 117 4-153 7-128 (137)
71 2pzi_A Probable serine/threoni 99.8 5.3E-21 1.8E-25 149.6 3.9 167 5-172 432-602 (681)
72 3mkr_A Coatomer subunit epsilo 99.8 2E-19 6.8E-24 127.4 11.6 158 6-173 101-262 (291)
73 4gyw_A UDP-N-acetylglucosamine 99.8 1.6E-20 5.4E-25 147.1 6.5 139 35-178 4-143 (723)
74 2vsy_A XCC0866; transferase, g 99.8 7E-19 2.4E-23 135.0 15.0 134 6-177 23-159 (568)
75 4gcn_A Protein STI-1; structur 99.8 1.2E-19 4E-24 113.3 8.5 104 71-174 6-111 (127)
76 2if4_A ATFKBP42; FKBP-like, al 99.8 1.2E-19 4.1E-24 131.0 9.7 154 3-176 176-329 (338)
77 3cv0_A Peroxisome targeting si 99.8 1.3E-19 4.3E-24 129.2 9.6 160 7-175 56-235 (327)
78 1ihg_A Cyclophilin 40; ppiase 99.8 2.2E-18 7.6E-23 125.8 15.9 137 3-156 220-356 (370)
79 1na0_A Designed protein CTPR3; 99.8 7.8E-18 2.7E-22 103.6 16.1 116 5-153 8-123 (125)
80 2c2l_A CHIP, carboxy terminus 99.8 2E-19 6.8E-24 126.8 10.0 142 5-179 3-168 (281)
81 2dba_A Smooth muscle cell asso 99.8 8.4E-18 2.9E-22 106.8 15.8 118 4-151 26-143 (148)
82 1qqe_A Vesicular transport pro 99.8 1.8E-18 6E-23 122.5 13.8 169 4-177 35-230 (292)
83 2xpi_A Anaphase-promoting comp 99.8 9.4E-19 3.2E-23 134.4 13.4 164 5-173 304-468 (597)
84 2gw1_A Mitochondrial precursor 99.8 1.4E-19 4.8E-24 136.4 7.7 168 5-177 303-480 (514)
85 2xev_A YBGF; tetratricopeptide 99.8 8.7E-18 3E-22 104.5 14.7 114 6-149 2-118 (129)
86 1elr_A TPR2A-domain of HOP; HO 99.8 1.4E-17 4.7E-22 103.4 15.5 118 4-155 2-126 (131)
87 3mkr_A Coatomer subunit epsilo 99.8 3.3E-18 1.1E-22 121.1 14.2 163 5-177 64-231 (291)
88 2gw1_A Mitochondrial precursor 99.8 2.8E-19 9.6E-24 134.7 8.8 160 4-173 235-399 (514)
89 2e2e_A Formate-dependent nitri 99.8 2.9E-19 9.8E-24 117.4 7.6 126 13-176 17-145 (177)
90 2xcb_A PCRH, regulatory protei 99.8 1E-18 3.5E-23 111.0 9.8 98 71-173 16-113 (142)
91 3edt_B KLC 2, kinesin light ch 99.8 1.2E-18 4.3E-23 121.5 10.7 166 4-174 41-280 (283)
92 3fp2_A TPR repeat-containing p 99.8 3.7E-19 1.3E-23 134.9 8.4 165 5-174 309-490 (537)
93 3upv_A Heat shock protein STI1 99.8 1.3E-18 4.6E-23 108.1 9.5 98 72-174 3-100 (126)
94 2hr2_A Hypothetical protein; a 99.8 5.5E-19 1.9E-23 112.8 7.6 96 73-173 11-129 (159)
95 1hxi_A PEX5, peroxisome target 99.8 2.2E-18 7.6E-23 106.6 10.1 100 74-178 18-117 (121)
96 4g1t_A Interferon-induced prot 99.8 2.1E-18 7.2E-23 129.1 11.2 168 5-177 246-461 (472)
97 3qky_A Outer membrane assembly 99.8 2.4E-18 8.3E-23 119.7 10.8 156 6-167 52-253 (261)
98 1p5q_A FKBP52, FK506-binding p 99.8 3.6E-19 1.2E-23 128.4 6.7 155 16-177 75-261 (336)
99 1zu2_A Mitochondrial import re 99.8 6.5E-18 2.2E-22 107.6 10.6 101 16-149 12-133 (158)
100 3nf1_A KLC 1, kinesin light ch 99.8 3.3E-18 1.1E-22 121.1 9.9 166 4-174 67-306 (311)
101 1xnf_A Lipoprotein NLPI; TPR, 99.8 1.5E-17 5.2E-22 115.8 13.1 156 12-173 11-171 (275)
102 2ond_A Cleavage stimulation fa 99.8 3.9E-18 1.3E-22 121.6 10.0 161 5-174 49-231 (308)
103 3k9i_A BH0479 protein; putativ 99.8 5E-18 1.7E-22 104.3 9.1 101 18-148 2-102 (117)
104 3sz7_A HSC70 cochaperone (SGT) 99.8 7.7E-18 2.6E-22 109.3 10.0 102 71-177 9-112 (164)
105 2ond_A Cleavage stimulation fa 99.7 1.5E-17 5.1E-22 118.5 11.6 160 5-173 98-268 (308)
106 3as5_A MAMA; tetratricopeptide 99.7 1.9E-17 6.5E-22 108.6 11.0 139 5-143 41-180 (186)
107 3nf1_A KLC 1, kinesin light ch 99.7 9.2E-18 3.2E-22 118.8 10.1 165 4-173 25-222 (311)
108 1qqe_A Vesicular transport pro 99.7 1.6E-17 5.5E-22 117.6 11.1 136 21-174 32-186 (292)
109 3urz_A Uncharacterized protein 99.7 1.5E-16 5.1E-21 107.3 15.3 136 12-149 60-198 (208)
110 3ulq_A Response regulator aspa 99.7 4.2E-17 1.4E-21 119.4 13.2 163 6-173 103-291 (383)
111 4g1t_A Interferon-induced prot 99.7 1.1E-16 3.9E-21 119.7 15.0 171 6-177 51-244 (472)
112 3rjv_A Putative SEL1 repeat pr 99.7 6.5E-17 2.2E-21 109.4 11.9 167 4-175 16-197 (212)
113 2kck_A TPR repeat; tetratricop 99.7 3.9E-17 1.3E-21 98.7 9.4 101 7-140 7-110 (112)
114 2e2e_A Formate-dependent nitri 99.7 2.9E-16 9.8E-21 103.0 14.1 110 5-147 43-155 (177)
115 2vsy_A XCC0866; transferase, g 99.7 2.7E-17 9.1E-22 126.2 10.4 121 19-177 2-122 (568)
116 2l6j_A TPR repeat-containing p 99.7 2.2E-16 7.4E-21 95.5 12.0 96 72-172 3-104 (111)
117 3q49_B STIP1 homology and U bo 99.7 6.9E-17 2.4E-21 101.4 10.1 97 72-173 8-104 (137)
118 3rkv_A Putative peptidylprolyl 99.7 3.8E-17 1.3E-21 105.9 8.9 101 72-177 10-128 (162)
119 1ouv_A Conserved hypothetical 99.7 2.4E-16 8.1E-21 110.2 13.1 163 4-175 4-179 (273)
120 3q15_A PSP28, response regulat 99.7 1.9E-16 6.5E-21 115.8 13.1 164 5-173 100-288 (378)
121 2kck_A TPR repeat; tetratricop 99.7 6.7E-17 2.3E-21 97.6 7.9 99 74-177 7-108 (112)
122 1hh8_A P67PHOX, NCF-2, neutrop 99.7 1.4E-15 4.7E-20 102.4 15.1 110 6-148 37-162 (213)
123 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 1.4E-17 4.7E-22 124.8 5.6 153 20-179 200-384 (457)
124 4a1s_A PINS, partner of inscut 99.7 1.1E-16 3.9E-21 117.7 10.3 165 4-173 46-250 (411)
125 1elw_A TPR1-domain of HOP; HOP 99.7 5.5E-16 1.9E-20 94.3 11.7 101 73-178 4-104 (118)
126 2ifu_A Gamma-SNAP; membrane fu 99.7 1.4E-16 4.9E-21 113.4 10.3 167 4-177 34-225 (307)
127 3ro3_A PINS homolog, G-protein 99.7 5.3E-16 1.8E-20 99.4 11.2 138 4-173 7-156 (164)
128 2yhc_A BAMD, UPF0169 lipoprote 99.7 4.9E-16 1.7E-20 105.9 11.0 137 6-142 41-219 (225)
129 3sf4_A G-protein-signaling mod 99.7 8.8E-17 3E-21 117.7 7.6 164 5-173 86-294 (406)
130 1dce_A Protein (RAB geranylger 99.7 2.1E-16 7.3E-21 121.0 9.6 168 4-176 61-268 (567)
131 2lni_A Stress-induced-phosphop 99.7 2.9E-16 9.8E-21 97.8 8.6 101 70-175 13-113 (133)
132 2fbn_A 70 kDa peptidylprolyl i 99.7 4.4E-16 1.5E-20 104.0 9.9 106 65-175 30-151 (198)
133 3sf4_A G-protein-signaling mod 99.7 3.5E-16 1.2E-20 114.5 10.2 164 5-173 8-214 (406)
134 3u3w_A Transcriptional activat 99.7 6E-16 2E-20 109.5 11.0 165 4-173 73-264 (293)
135 4f3v_A ESX-1 secretion system 99.7 2.4E-15 8.2E-20 104.8 13.7 163 4-173 5-235 (282)
136 2vyi_A SGTA protein; chaperone 99.7 1.4E-15 4.7E-20 94.2 11.3 102 69-175 8-109 (131)
137 3edt_B KLC 2, kinesin light ch 99.7 8.9E-17 3.1E-21 112.0 6.4 152 17-173 12-196 (283)
138 1ouv_A Conserved hypothetical 99.7 1.5E-15 5.2E-20 106.1 12.7 160 6-174 74-250 (273)
139 1zu2_A Mitochondrial import re 99.7 1.7E-16 5.9E-21 101.0 6.8 96 84-179 13-126 (158)
140 3dra_A Protein farnesyltransfe 99.7 2.2E-15 7.5E-20 106.9 13.1 150 4-153 65-232 (306)
141 4a1s_A PINS, partner of inscut 99.7 1.3E-16 4.6E-21 117.3 7.1 164 5-173 85-290 (411)
142 2xev_A YBGF; tetratricopeptide 99.7 4.2E-16 1.4E-20 96.8 8.4 97 74-175 3-105 (129)
143 3ro2_A PINS homolog, G-protein 99.7 4.4E-16 1.5E-20 110.8 9.1 164 5-173 4-210 (338)
144 2qfc_A PLCR protein; TPR, HTH, 99.7 2.7E-15 9.1E-20 106.1 12.7 165 4-173 73-264 (293)
145 3ro2_A PINS homolog, G-protein 99.7 3.3E-16 1.1E-20 111.5 8.0 164 5-173 82-290 (338)
146 3ulq_A Response regulator aspa 99.6 1.7E-15 5.9E-20 110.8 11.9 101 69-174 139-252 (383)
147 1dce_A Protein (RAB geranylger 99.6 6.3E-16 2.2E-20 118.4 9.8 164 15-178 37-226 (567)
148 3dra_A Protein farnesyltransfe 99.6 9.1E-16 3.1E-20 108.8 9.8 164 13-176 39-216 (306)
149 3gw4_A Uncharacterized protein 99.6 3.1E-15 1E-19 99.8 11.8 138 4-173 24-174 (203)
150 2dba_A Smooth muscle cell asso 99.6 2E-15 6.8E-20 95.7 10.2 100 72-176 27-129 (148)
151 3dss_A Geranylgeranyl transfer 99.6 1.5E-15 5E-20 108.5 10.4 163 15-177 38-226 (331)
152 1a17_A Serine/threonine protei 99.6 3.5E-15 1.2E-19 96.3 11.4 100 71-175 11-110 (166)
153 1na3_A Designed protein CTPR2; 99.6 8.8E-15 3E-19 85.2 11.6 82 72-153 8-89 (91)
154 2kat_A Uncharacterized protein 99.6 1.2E-14 4.1E-19 88.6 12.5 100 24-156 3-104 (115)
155 2l6j_A TPR repeat-containing p 99.6 2.7E-16 9.2E-21 95.1 4.8 96 4-132 2-103 (111)
156 2fo7_A Synthetic consensus TPR 99.6 2.1E-14 7.2E-19 89.1 13.4 103 5-140 34-136 (136)
157 2r5s_A Uncharacterized protein 99.6 8.7E-16 3E-20 100.8 7.1 127 4-135 38-172 (176)
158 2ooe_A Cleavage stimulation fa 99.6 1.7E-15 5.9E-20 115.3 9.7 162 5-174 271-453 (530)
159 2qfc_A PLCR protein; TPR, HTH, 99.6 5.2E-14 1.8E-18 99.5 16.4 96 73-173 115-223 (293)
160 1elr_A TPR2A-domain of HOP; HO 99.6 2.4E-15 8.2E-20 93.1 8.4 98 72-174 3-107 (131)
161 1na0_A Designed protein CTPR3; 99.6 8.7E-15 3E-19 89.8 10.7 98 73-175 9-106 (125)
162 3q15_A PSP28, response regulat 99.6 1.5E-14 5E-19 105.8 13.5 108 4-138 180-292 (378)
163 2ifu_A Gamma-SNAP; membrane fu 99.6 2.7E-15 9.2E-20 106.9 9.3 152 3-173 7-182 (307)
164 3dss_A Geranylgeranyl transfer 99.6 4.7E-15 1.6E-19 105.9 10.4 174 4-177 62-269 (331)
165 3k9i_A BH0479 protein; putativ 99.6 3.5E-16 1.2E-20 96.0 3.9 85 85-174 2-89 (117)
166 2c2l_A CHIP, carboxy terminus 99.6 5.1E-15 1.7E-19 104.2 9.8 96 73-173 4-99 (281)
167 2if4_A ATFKBP42; FKBP-like, al 99.6 1E-14 3.6E-19 105.2 8.9 106 67-177 173-295 (338)
168 3q7a_A Farnesyltransferase alp 99.6 5.9E-15 2E-19 105.9 7.3 161 13-177 61-241 (349)
169 3e4b_A ALGK; tetratricopeptide 99.6 5.1E-14 1.8E-18 105.4 12.0 160 7-176 177-352 (452)
170 2ooe_A Cleavage stimulation fa 99.6 3.5E-14 1.2E-18 108.1 11.1 160 5-173 320-490 (530)
171 1na3_A Designed protein CTPR2; 99.6 1.5E-13 5.2E-18 79.8 11.5 85 4-121 7-91 (91)
172 1ihg_A Cyclophilin 40; ppiase 99.5 2.7E-14 9.1E-19 104.3 9.8 101 72-177 222-338 (370)
173 3u3w_A Transcriptional activat 99.5 7.2E-14 2.5E-18 98.8 11.4 95 74-173 116-223 (293)
174 3q7a_A Farnesyltransferase alp 99.5 1.1E-13 3.8E-18 99.3 12.3 148 4-155 86-256 (349)
175 3qou_A Protein YBBN; thioredox 99.5 5.7E-15 1.9E-19 104.3 5.4 135 36-175 113-248 (287)
176 4f3v_A ESX-1 secretion system 99.5 1.5E-13 5E-18 95.9 12.0 142 5-148 101-248 (282)
177 3n71_A Histone lysine methyltr 99.5 2.1E-13 7.1E-18 102.7 13.3 138 5-172 308-461 (490)
178 1wao_1 Serine/threonine protei 99.5 8.7E-15 3E-19 110.2 5.8 98 72-174 5-102 (477)
179 1hz4_A MALT regulatory protein 99.5 2.8E-13 9.6E-18 98.5 12.6 164 5-173 13-201 (373)
180 3ma5_A Tetratricopeptide repea 99.5 1.7E-13 5.7E-18 81.6 9.3 82 72-153 6-89 (100)
181 2kc7_A BFR218_protein; tetratr 99.5 3.5E-14 1.2E-18 84.1 6.3 69 77-145 4-73 (99)
182 2kc7_A BFR218_protein; tetratr 99.4 2E-12 6.9E-17 76.4 10.8 58 75-140 37-94 (99)
183 3gw4_A Uncharacterized protein 99.4 1.2E-12 4.1E-17 87.1 10.5 120 16-173 2-134 (203)
184 2kat_A Uncharacterized protein 99.4 6E-13 2.1E-17 81.0 8.2 79 90-173 2-80 (115)
185 2xm6_A Protein corresponding t 99.4 2.3E-12 7.8E-17 97.2 13.0 160 5-173 38-214 (490)
186 3mv2_B Coatomer subunit epsilo 99.4 4E-12 1.4E-16 89.8 12.2 163 6-178 100-285 (310)
187 1hz4_A MALT regulatory protein 99.4 4.1E-12 1.4E-16 92.4 12.5 167 6-177 53-246 (373)
188 2xm6_A Protein corresponding t 99.4 6.1E-12 2.1E-16 94.9 13.5 15 120-134 272-286 (490)
189 3ro3_A PINS homolog, G-protein 99.4 5.9E-12 2E-16 80.3 11.2 108 5-139 48-161 (164)
190 3e4b_A ALGK; tetratricopeptide 99.4 6.3E-13 2.2E-17 99.5 7.2 164 5-175 68-280 (452)
191 3rjv_A Putative SEL1 repeat pr 99.4 1.1E-11 3.8E-16 83.6 12.4 138 5-148 49-207 (212)
192 3ly7_A Transcriptional activat 99.3 5E-11 1.7E-15 85.7 13.7 134 6-141 196-344 (372)
193 1klx_A Cysteine rich protein B 99.3 2.4E-11 8.3E-16 76.4 10.6 115 19-175 8-126 (138)
194 3ma5_A Tetratricopeptide repea 99.3 3.2E-12 1.1E-16 75.9 6.2 67 102-173 2-68 (100)
195 3qwp_A SET and MYND domain-con 99.3 1.5E-10 5.1E-15 86.0 15.2 123 6-153 287-425 (429)
196 3qww_A SET and MYND domain-con 99.3 2.8E-10 9.7E-15 84.5 15.3 112 9-145 301-425 (433)
197 2v5f_A Prolyl 4-hydroxylase su 99.3 6.1E-11 2.1E-15 70.9 9.5 83 6-114 5-87 (104)
198 1pc2_A Mitochondria fission pr 99.3 3.3E-10 1.1E-14 71.4 13.2 81 73-153 32-117 (152)
199 2v5f_A Prolyl 4-hydroxylase su 99.3 2E-10 6.9E-15 68.6 11.3 78 72-149 4-88 (104)
200 3bee_A Putative YFRE protein; 99.2 8.7E-11 3E-15 68.7 9.1 71 72-142 5-78 (93)
201 1b89_A Protein (clathrin heavy 99.2 1.1E-11 3.9E-16 91.2 5.5 93 74-179 123-240 (449)
202 4b4t_Q 26S proteasome regulato 99.2 4.3E-10 1.5E-14 83.1 12.5 163 5-172 54-235 (434)
203 1xi4_A Clathrin heavy chain; a 99.2 3E-10 1E-14 93.4 12.3 94 74-180 1196-1314(1630)
204 1klx_A Cysteine rich protein B 99.2 6.7E-10 2.3E-14 69.8 11.1 98 12-148 31-136 (138)
205 4b4t_Q 26S proteasome regulato 99.1 2.8E-10 9.5E-15 84.2 9.4 163 6-173 4-202 (434)
206 1xi4_A Clathrin heavy chain; a 99.1 7.8E-10 2.7E-14 91.0 12.0 121 38-176 1103-1251(1630)
207 3n71_A Histone lysine methyltr 99.1 4.5E-10 1.5E-14 84.6 9.7 110 3-137 348-465 (490)
208 1b89_A Protein (clathrin heavy 99.1 7.8E-12 2.7E-16 92.1 -0.8 148 3-175 29-177 (449)
209 3u64_A Protein TP_0956; tetrat 99.1 3.1E-09 1.1E-13 73.8 11.6 81 88-173 178-267 (301)
210 3bee_A Putative YFRE protein; 99.0 8.6E-10 2.9E-14 64.4 6.5 71 103-178 2-75 (93)
211 4e6h_A MRNA 3'-END-processing 99.0 4.6E-09 1.6E-13 82.1 10.9 165 6-175 343-533 (679)
212 1pc2_A Mitochondria fission pr 98.9 1.5E-08 5E-13 64.0 9.2 80 6-117 32-115 (152)
213 3mv2_B Coatomer subunit epsilo 98.9 1.1E-08 3.8E-13 72.3 9.6 136 4-146 134-292 (310)
214 3u64_A Protein TP_0956; tetrat 98.9 1.2E-08 4.1E-13 70.9 9.5 89 21-140 178-273 (301)
215 3qww_A SET and MYND domain-con 98.9 8.8E-09 3E-13 76.5 8.3 87 82-173 307-409 (433)
216 1nzn_A CGI-135 protein, fissio 98.8 6.1E-07 2.1E-11 54.6 13.4 77 74-150 36-117 (126)
217 3ly7_A Transcriptional activat 98.8 9.9E-08 3.4E-12 68.8 10.6 70 101-176 271-340 (372)
218 2uy1_A Cleavage stimulation fa 98.7 8E-07 2.7E-11 67.3 15.0 160 6-172 213-380 (493)
219 3qwp_A SET and MYND domain-con 98.7 5.8E-08 2E-12 72.2 8.3 88 81-173 295-398 (429)
220 4e6h_A MRNA 3'-END-processing 98.7 7.1E-08 2.4E-12 75.5 8.4 162 7-173 379-568 (679)
221 3o48_A Mitochondria fission 1 98.4 1.5E-05 5.1E-10 48.8 11.6 82 72-153 39-124 (134)
222 3ffl_A Anaphase-promoting comp 98.4 1.3E-05 4.6E-10 51.0 11.5 117 9-150 23-164 (167)
223 1nzn_A CGI-135 protein, fissio 98.4 4.5E-06 1.5E-10 50.8 8.6 98 18-117 13-118 (126)
224 3o48_A Mitochondria fission 1 98.3 1.7E-05 5.9E-10 48.5 9.9 80 6-117 40-122 (134)
225 1y8m_A FIS1; mitochondria, unk 98.2 6.6E-05 2.3E-09 46.5 12.1 82 72-153 38-123 (144)
226 1y8m_A FIS1; mitochondria, unk 98.2 4.2E-05 1.4E-09 47.4 10.9 79 6-116 39-120 (144)
227 4h7y_A Dual specificity protei 98.2 0.00012 4.1E-09 45.8 13.0 115 5-145 12-132 (161)
228 3ffl_A Anaphase-promoting comp 98.1 1E-05 3.4E-10 51.5 6.9 94 74-172 21-148 (167)
229 4gns_B Protein CSD3, chitin bi 98.0 5.4E-05 1.9E-09 59.8 9.6 61 73-133 337-397 (754)
230 2uy1_A Cleavage stimulation fa 97.9 0.00046 1.6E-08 52.3 13.1 111 7-155 287-398 (493)
231 4g26_A Pentatricopeptide repea 97.8 0.00095 3.2E-08 50.7 13.2 151 11-172 31-201 (501)
232 4h7y_A Dual specificity protei 97.7 0.00018 6E-09 45.1 7.2 96 72-173 12-121 (161)
233 2ff4_A Probable regulatory pro 97.7 0.0037 1.3E-07 45.9 14.7 118 7-135 116-233 (388)
234 1ya0_A SMG-7 transcript varian 97.6 0.00079 2.7E-08 50.9 10.6 80 74-153 153-232 (497)
235 3txn_A 26S proteasome regulato 97.2 0.021 7.2E-07 41.9 13.7 100 11-137 104-211 (394)
236 1ya0_A SMG-7 transcript varian 96.9 0.0092 3.1E-07 45.2 9.7 42 8-49 154-195 (497)
237 3kae_A CDC27, possible protein 96.8 0.041 1.4E-06 35.4 12.0 71 74-144 63-151 (242)
238 1zbp_A Hypothetical protein VP 96.8 0.056 1.9E-06 37.3 12.1 62 14-108 5-66 (273)
239 1zbp_A Hypothetical protein VP 96.8 0.021 7.3E-07 39.4 9.7 62 82-143 6-67 (273)
240 4b4t_R RPN7, 26S proteasome re 96.7 0.047 1.6E-06 40.6 12.0 102 8-139 133-240 (429)
241 3kae_A CDC27, possible protein 96.6 0.066 2.2E-06 34.5 12.3 88 3-109 59-150 (242)
242 2ff4_A Probable regulatory pro 96.6 0.033 1.1E-06 40.8 10.6 92 76-172 118-231 (388)
243 4g26_A Pentatricopeptide repea 96.5 0.17 5.8E-06 38.4 15.7 76 74-151 141-220 (501)
244 4gns_B Protein CSD3, chitin bi 96.5 0.018 6E-07 45.8 9.1 80 88-172 300-397 (754)
245 4b4t_P 26S proteasome regulato 96.4 0.18 6.3E-06 37.6 14.0 106 4-136 135-247 (445)
246 3txn_A 26S proteasome regulato 96.4 0.032 1.1E-06 41.0 9.3 165 5-172 18-207 (394)
247 3mkq_B Coatomer subunit alpha; 95.7 0.033 1.1E-06 36.0 5.9 45 85-134 17-61 (177)
248 1qsa_A Protein (soluble lytic 95.7 0.3 1E-05 38.1 12.1 57 79-135 291-347 (618)
249 3mkq_A Coatomer beta'-subunit; 95.7 0.12 4.2E-06 41.1 10.4 27 73-99 681-707 (814)
250 4b4t_S RPN3, 26S proteasome re 95.2 0.15 5.3E-06 38.7 8.9 69 72-142 230-305 (523)
251 3mkq_A Coatomer beta'-subunit; 94.6 0.83 2.9E-05 36.3 12.3 27 6-32 681-707 (814)
252 3spa_A Mtrpol, DNA-directed RN 94.1 0.39 1.3E-05 39.8 9.2 92 74-172 128-227 (1134)
253 3mkq_B Coatomer subunit alpha; 94.0 0.56 1.9E-05 30.3 8.2 60 74-133 35-115 (177)
254 4fhn_B Nucleoporin NUP120; pro 93.8 0.31 1.1E-05 40.9 8.5 93 74-171 843-963 (1139)
255 3spa_A Mtrpol, DNA-directed RN 93.5 3 0.0001 34.9 13.4 95 8-137 129-231 (1134)
256 4fhn_B Nucleoporin NUP120; pro 93.5 0.14 4.8E-06 42.9 5.9 115 9-133 845-964 (1139)
257 4b4t_R RPN7, 26S proteasome re 93.3 0.43 1.5E-05 35.4 7.9 98 74-172 132-234 (429)
258 1qsa_A Protein (soluble lytic 92.9 0.76 2.6E-05 35.9 8.8 132 8-174 216-347 (618)
259 4b4t_P 26S proteasome regulato 91.6 2.3 7.9E-05 31.8 9.8 72 4-102 175-247 (445)
260 4b4t_S RPN3, 26S proteasome re 91.5 2 6.8E-05 32.8 9.3 74 5-106 230-303 (523)
261 2w2u_A Hypothetical P60 katani 91.5 0.48 1.6E-05 26.4 4.6 33 3-35 16-48 (83)
262 2crb_A Nuclear receptor bindin 91.1 0.62 2.1E-05 26.4 4.7 33 3-35 12-44 (97)
263 3ax2_A Mitochondrial import re 90.7 0.6 2.1E-05 25.3 4.4 33 9-41 20-52 (73)
264 3t5x_A PCI domain-containing p 90.6 1.8 6.2E-05 28.6 7.6 53 72-124 13-70 (203)
265 2v6y_A AAA family ATPase, P60 90.6 0.64 2.2E-05 25.9 4.6 33 3-35 8-40 (83)
266 1wy6_A Hypothetical protein ST 90.4 2.1 7.2E-05 26.6 7.0 121 12-137 13-155 (172)
267 3t5v_B Nuclear mRNA export pro 88.9 3.2 0.00011 31.1 8.5 64 77-140 180-254 (455)
268 3ax2_A Mitochondrial import re 88.8 1.8 6E-05 23.4 5.6 31 112-142 22-52 (73)
269 2v6x_A Vacuolar protein sortin 88.6 1.1 3.7E-05 25.0 4.6 33 3-35 10-42 (85)
270 1wfd_A Hypothetical protein 15 88.4 1.1 3.8E-05 25.5 4.6 33 3-35 12-44 (93)
271 4a5x_A MITD1, MIT domain-conta 87.3 1.5 5E-05 24.6 4.6 31 5-35 15-45 (86)
272 2cpt_A SKD1 protein, vacuolar 86.6 1.3 4.6E-05 26.4 4.4 33 3-35 15-47 (117)
273 2cfu_A SDSA1; SDS-hydrolase, l 86.3 3.4 0.00012 32.6 7.8 50 108-157 450-499 (658)
274 1om2_A Protein (mitochondrial 86.3 0.97 3.3E-05 25.8 3.5 31 9-39 23-53 (95)
275 2crb_A Nuclear receptor bindin 84.6 2.2 7.5E-05 24.2 4.3 29 73-101 15-43 (97)
276 4gq2_M Nucleoporin NUP120; bet 84.6 12 0.0004 31.1 10.3 69 74-142 841-933 (950)
277 2ijq_A Hypothetical protein; s 83.3 6.6 0.00023 24.9 8.3 70 8-102 34-104 (161)
278 1om2_A Protein (mitochondrial 82.0 2.9 0.0001 23.9 4.2 28 77-104 24-51 (95)
279 3t5x_A PCI domain-containing p 81.6 5.5 0.00019 26.2 6.2 37 107-143 14-50 (203)
280 2cwy_A Hypothetical protein TT 80.7 5.9 0.0002 22.5 6.3 63 10-101 5-67 (94)
281 2cfu_A SDSA1; SDS-hydrolase, l 79.6 5.3 0.00018 31.5 6.4 51 74-124 450-500 (658)
282 2w2u_A Hypothetical P60 katani 78.6 5.3 0.00018 22.1 4.6 20 80-99 26-45 (83)
283 2dl1_A Spartin; SPG20, MIT, st 77.6 3.2 0.00011 24.6 3.5 46 86-139 16-61 (116)
284 3mkr_B Coatomer subunit alpha; 76.5 18 0.00062 25.8 13.2 33 5-37 101-133 (320)
285 2v6y_A AAA family ATPase, P60 76.3 6.2 0.00021 21.8 4.4 11 91-101 10-20 (83)
286 4a5x_A MITD1, MIT domain-conta 75.8 7.2 0.00025 21.7 4.6 27 75-101 18-44 (86)
287 4gq2_M Nucleoporin NUP120; bet 74.8 13 0.00046 30.7 7.7 89 9-108 843-933 (950)
288 2rpa_A Katanin P60 ATPase-cont 74.6 3.6 0.00012 22.5 3.1 29 8-36 14-42 (78)
289 2vkj_A TM1634; membrane protei 73.7 9.7 0.00033 21.4 5.0 35 4-38 51-85 (106)
290 3lpz_A GET4 (YOR164C homolog); 71.5 25 0.00087 25.2 10.2 28 104-131 133-160 (336)
291 2rpa_A Katanin P60 ATPase-cont 71.1 4.9 0.00017 22.0 3.1 28 75-102 14-41 (78)
292 2ijq_A Hypothetical protein; s 70.0 18 0.00062 22.9 7.7 62 75-136 34-104 (161)
293 2v6x_A Vacuolar protein sortin 69.9 10 0.00035 20.9 4.3 27 75-101 15-41 (85)
294 1wfd_A Hypothetical protein 15 68.6 11 0.00038 21.3 4.3 24 77-100 19-42 (93)
295 3re2_A Predicted protein; meni 67.9 33 0.0011 25.1 8.7 77 74-150 256-345 (472)
296 3uzd_A 14-3-3 protein gamma; s 67.6 26 0.00091 23.9 10.8 32 7-38 5-36 (248)
297 3iqu_A 14-3-3 protein sigma; s 67.3 26 0.00089 23.7 10.2 32 7-38 9-40 (236)
298 2cpt_A SKD1 protein, vacuolar 66.0 12 0.00042 22.2 4.4 10 91-100 17-26 (117)
299 2dl1_A Spartin; SPG20, MIT, st 62.9 17 0.00059 21.5 4.4 32 4-35 20-51 (116)
300 2npm_A 14-3-3 domain containin 61.6 36 0.0012 23.4 6.7 15 86-100 211-225 (260)
301 4abx_A DNA repair protein RECN 60.6 18 0.00062 23.1 4.8 51 89-139 72-122 (175)
302 3mv2_A Coatomer subunit alpha; 59.8 45 0.0015 23.8 14.6 32 6-37 114-145 (325)
303 2xze_A STAM-binding protein; h 59.6 18 0.00061 22.4 4.4 32 4-35 38-69 (146)
304 3t5v_B Nuclear mRNA export pro 59.1 55 0.0019 24.6 7.8 35 72-106 219-254 (455)
305 1wy6_A Hypothetical protein ST 57.0 33 0.0011 21.4 7.5 32 72-103 124-155 (172)
306 3myv_A SUSD superfamily protei 56.8 40 0.0014 25.1 6.7 29 73-101 190-218 (454)
307 2pmr_A Uncharacterized protein 56.6 23 0.0008 19.8 4.1 29 3-31 36-64 (87)
308 2e2a_A Protein (enzyme IIA); h 56.5 24 0.00081 20.5 4.3 31 5-35 19-49 (105)
309 1wcr_A PTS system, N, N'-diace 56.4 24 0.00083 20.4 4.3 31 5-35 17-47 (103)
310 2oo2_A Hypothetical protein AF 56.2 24 0.00082 19.7 4.1 30 3-32 32-61 (86)
311 2yhe_A SEC-alkyl sulfatase; hy 60.8 2.4 8.2E-05 33.5 0.0 49 109-157 463-511 (668)
312 2ynq_A ESSB; membrane protein, 55.1 37 0.0013 21.4 7.7 21 10-30 12-32 (161)
313 3kez_A Putative sugar binding 55.1 44 0.0015 25.0 6.7 29 73-101 196-224 (461)
314 2npm_A 14-3-3 domain containin 54.8 49 0.0017 22.8 11.1 30 7-36 29-58 (260)
315 3mv2_A Coatomer subunit alpha; 53.9 58 0.002 23.3 7.3 89 12-102 34-143 (325)
316 4gq4_A Menin; tumor suppressor 52.8 70 0.0024 23.9 9.4 81 74-154 263-356 (489)
317 2wpv_A GET4, UPF0363 protein Y 52.8 59 0.002 23.1 11.0 64 72-135 133-216 (312)
318 3k1s_A PTS system, cellobiose- 52.5 30 0.001 20.3 4.3 31 5-35 21-51 (109)
319 3esl_A Checkpoint serine/threo 52.5 47 0.0016 21.9 11.0 64 74-138 81-146 (202)
320 3lew_A SUSD-like carbohydrate 50.4 56 0.0019 24.7 6.7 30 73-102 203-232 (495)
321 3l8r_A PTCA, putative PTS syst 50.3 33 0.0011 20.5 4.3 30 6-35 37-66 (120)
322 3esl_A Checkpoint serine/threo 50.2 30 0.001 22.8 4.4 33 72-104 114-146 (202)
323 3mcx_A SUSD superfamily protei 50.0 52 0.0018 24.7 6.4 31 72-102 201-231 (477)
324 3s6n_M SurviVal motor neuron p 49.9 16 0.00056 16.4 2.2 16 88-103 17-32 (37)
325 3mkr_B Coatomer subunit alpha; 49.2 53 0.0018 23.4 5.9 27 76-102 105-131 (320)
326 1o9d_A 14-3-3-like protein C; 48.6 63 0.0022 22.2 10.1 30 7-36 9-38 (260)
327 3eab_A Spastin; spastin, MIT, 48.4 15 0.00053 20.6 2.5 29 6-34 16-47 (89)
328 2a9u_A Ubiquitin carboxyl-term 48.2 41 0.0014 20.8 4.6 33 4-36 40-72 (144)
329 2wpv_A GET4, UPF0363 protein Y 48.1 71 0.0024 22.6 11.6 27 105-131 132-158 (312)
330 4aez_C MAD3, mitotic spindle c 47.7 32 0.0011 23.1 4.3 57 74-139 121-182 (223)
331 2yhe_A SEC-alkyl sulfatase; hy 52.8 4 0.00014 32.3 0.0 53 74-126 462-514 (668)
332 3snx_A SUSD homolog, putative 45.8 49 0.0017 24.8 5.7 31 72-102 190-220 (460)
333 3ubw_A 14-3-3E, 14-3-3 protein 45.7 72 0.0024 22.0 11.9 32 7-38 32-63 (261)
334 2br9_A 14-3-3E, 14-3-3 protein 45.0 69 0.0024 21.6 6.3 32 7-38 6-37 (234)
335 2ymb_A MITD1, MIT domain-conta 44.8 4.6 0.00016 27.7 0.0 33 4-36 21-53 (257)
336 2jpu_A ORF C02003 protein; sol 43.2 45 0.0015 20.2 4.1 32 3-34 4-35 (129)
337 3myv_A SUSD superfamily protei 43.1 1E+02 0.0034 23.0 7.0 47 90-136 165-219 (454)
338 2br9_A 14-3-3E, 14-3-3 protein 42.7 76 0.0026 21.4 10.6 47 124-171 147-198 (234)
339 3bqo_A Telomeric repeat-bindin 42.2 30 0.001 22.8 3.4 36 114-149 124-159 (211)
340 2npu_A FKBP12-rapamycin comple 41.5 57 0.002 19.7 5.7 76 78-153 45-122 (126)
341 3lpz_A GET4 (YOR164C homolog); 41.1 98 0.0033 22.2 13.0 41 125-170 120-160 (336)
342 3kez_A Putative sugar binding 41.0 1.1E+02 0.0038 22.8 6.9 47 90-136 171-225 (461)
343 3hdx_A SUSD homolog, SUSD supe 40.3 89 0.003 23.4 6.4 31 72-102 196-226 (478)
344 2vkj_A TM1634; membrane protei 39.6 51 0.0017 18.5 6.3 30 73-102 53-82 (106)
345 3ph0_C ASCG; type III secretio 39.2 39 0.0013 17.1 6.3 48 79-127 12-60 (61)
346 2rkl_A Vacuolar protein sortin 38.6 39 0.0013 16.9 4.5 33 3-35 17-49 (53)
347 3efz_A 14-3-3 protein; 14-3-3, 38.3 94 0.0032 21.5 5.6 51 86-136 172-226 (268)
348 3lew_A SUSD-like carbohydrate 38.1 1.3E+02 0.0044 22.8 7.0 30 107-136 203-232 (495)
349 3mcx_A SUSD superfamily protei 37.0 1.3E+02 0.0043 22.6 6.7 49 89-137 176-232 (477)
350 2cwy_A Hypothetical protein TT 36.1 59 0.002 18.3 6.2 56 78-135 6-67 (94)
351 3ubw_A 14-3-3E, 14-3-3 protein 35.5 1.1E+02 0.0037 21.1 6.3 46 90-135 173-227 (261)
352 3qnk_A Putative lipoprotein; a 34.5 1.2E+02 0.0041 23.0 6.3 30 73-102 182-211 (517)
353 3bqo_A Telomeric repeat-bindin 33.6 22 0.00075 23.4 1.8 38 79-116 123-160 (211)
354 4aez_C MAD3, mitotic spindle c 33.6 1.1E+02 0.0037 20.6 9.4 30 74-103 151-180 (223)
355 3uzd_A 14-3-3 protein gamma; s 33.6 1.1E+02 0.0039 20.8 6.3 46 90-135 148-202 (248)
356 1o3u_A Conserved hypothetical 33.2 80 0.0027 18.9 4.6 33 3-35 13-45 (135)
357 2wxu_A Phospholipase C; cytoly 33.0 74 0.0025 23.2 4.6 34 3-36 95-128 (370)
358 4ady_A RPN2, 26S proteasome re 32.5 2.3E+02 0.0077 23.9 12.4 61 74-135 456-518 (963)
359 3u84_A Menin; MLL, JUND, ledgf 31.3 1.7E+02 0.0058 22.1 11.7 45 105-149 316-366 (550)
360 2ca5_A MXIH; transport protein 30.8 72 0.0025 17.6 5.5 27 87-113 24-50 (85)
361 1o9d_A 14-3-3-like protein C; 30.4 1.3E+02 0.0046 20.7 7.7 46 90-135 152-206 (260)
362 1wol_A ST0689, 122AA long cons 30.4 84 0.0029 18.3 4.6 33 3-35 8-40 (122)
363 2g0u_A Type III secretion syst 30.2 78 0.0027 17.9 4.9 25 87-111 30-54 (92)
364 4a1g_A Mitotic checkpoint seri 30.1 1E+02 0.0035 19.2 8.9 60 74-139 72-133 (152)
365 1olp_A Alpha-toxin; zinc phosp 29.6 82 0.0028 23.0 4.4 36 3-38 95-130 (370)
366 1ufb_A TT1696 protein; structu 28.7 92 0.0031 18.2 4.4 33 3-35 8-40 (127)
367 2zan_A Vacuolar protein sortin 27.9 13 0.00043 27.8 0.0 35 3-37 8-42 (444)
368 3i4g_A SUSD-like carbohydrate 26.7 1.6E+02 0.0056 22.5 5.9 30 73-102 198-227 (528)
369 3hdx_A SUSD homolog, SUSD supe 26.4 85 0.0029 23.5 4.3 31 107-137 364-394 (478)
370 2yin_A DOCK2, dedicator of cyt 25.6 2.1E+02 0.0072 21.3 7.2 101 9-119 38-138 (436)
371 3snx_A SUSD homolog, putative 23.7 89 0.003 23.4 3.9 33 4-36 189-221 (460)
372 2wvi_A Mitotic checkpoint seri 23.2 1.5E+02 0.0051 18.8 9.6 59 74-138 67-127 (164)
373 3qnk_A Putative lipoprotein; a 22.7 1E+02 0.0035 23.4 4.2 33 3-35 179-211 (517)
374 3bu8_A Telomeric repeat-bindin 22.6 1.8E+02 0.0062 19.5 8.2 39 81-119 122-160 (235)
375 3re2_A Predicted protein; meni 21.6 2.5E+02 0.0085 20.8 5.5 86 8-102 237-325 (472)
376 2wm9_A Dedicator of cytokinesi 21.5 2.5E+02 0.0087 20.8 8.2 23 9-31 14-36 (428)
377 3jq1_A SUSD superfamily protei 20.2 2.2E+02 0.0074 21.4 5.4 46 89-134 154-207 (481)
No 1
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.96 E-value=1.8e-28 Score=162.49 Aligned_cols=169 Identities=14% Similarity=0.139 Sum_probs=150.8
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
+.+..++.+|.++...|++++|+.+|+++++++|+++.++..+|.++ ..++.+.+...+.......+..+.++..+|.+
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999887 55666555555444444444456899999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRF 162 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
+...++++.|+..+.+++..+|+++.++..+|.++..+|++++|+..|+++++++|+++.++..+|.++.. +|++
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-----~g~~ 157 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-----KGLR 157 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-----CCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cccchhhhhcccCCC
Q 044796 163 GMSTDNFKAVKDPNT 177 (186)
Q Consensus 163 ~~A~~~~~~~~~~~~ 177 (186)
++|+.+|+++++.+|
T Consensus 158 ~~A~~~~~~al~~~p 172 (184)
T 3vtx_A 158 DEAVKYFKKALEKEE 172 (184)
T ss_dssp HHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHhCCc
Confidence 999999999964443
No 2
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.94 E-value=2.5e-26 Score=156.30 Aligned_cols=167 Identities=17% Similarity=0.196 Sum_probs=146.7
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..++.+|.++...|++++|+..|+++++.+|+++.++..+|.+. ..++.+.+...+.......|.++.++..+|.++
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 83 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAY 83 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999887 556666666555544444455568999999999
Q ss_pred hhh-----------ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 044796 84 LKL-----------GKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLK 152 (186)
Q Consensus 84 ~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 152 (186)
... |++++|+..++++++++|+++.++..+|.++..+|++++|+..|+++++++ +++.++..+|.++.
T Consensus 84 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~ 162 (217)
T 2pl2_A 84 VALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYL 162 (217)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
T ss_pred HHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHH
Confidence 999 999999999999999999999999999999999999999999999999999 99999999999998
Q ss_pred HHHHHhhccccccchhhhhcccCCC
Q 044796 153 EMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 153 ~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
. .|++++|+..|++++..+|
T Consensus 163 ~-----~g~~~~A~~~~~~al~~~P 182 (217)
T 2pl2_A 163 S-----MGRLDEALAQYAKALEQAP 182 (217)
T ss_dssp H-----HTCHHHHHHHHHHHHHHST
T ss_pred H-----cCCHHHHHHHHHHHHHhCC
Confidence 8 9999999999998864333
No 3
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.94 E-value=5.6e-26 Score=177.67 Aligned_cols=166 Identities=20% Similarity=0.209 Sum_probs=151.7
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGI 81 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 81 (186)
.+.++++.++|.++...|++++|+.+|+++++++|++..++..+|.++ ..++.+++...+.......|..+.++.++|.
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999987 5566666666555444445556699999999
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcc
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 161 (186)
++..+|++++|+..|+++++++|+++.++.++|.++..+|++++|+..|+++++++|+++.++.+++.++.. +++
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~-----~g~ 160 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQI-----VCD 160 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-----TTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHh-----ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred ccccchhhhhcc
Q 044796 162 FGMSTDNFKAVK 173 (186)
Q Consensus 162 ~~~A~~~~~~~~ 173 (186)
+++|++.+++++
T Consensus 161 ~~~A~~~~~kal 172 (723)
T 4gyw_A 161 WTDYDERMKKLV 172 (723)
T ss_dssp CTTHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998774
No 4
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.94 E-value=2.9e-25 Score=138.67 Aligned_cols=115 Identities=29% Similarity=0.538 Sum_probs=110.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.++.+.++|..++..|+|++|+.+|+++++++|. ++.+|..+|.++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~---------------------------------~~~~~~~~~~~~ 57 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE---------------------------------NAILYSNRAACL 57 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------------------------CHHHHHHHhhHH
Confidence 57899999999999999999999999999999999 338899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
..+|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|+++.++..++.++
T Consensus 58 ~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 58 TKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999988764
No 5
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.93 E-value=3.7e-25 Score=150.51 Aligned_cols=163 Identities=15% Similarity=0.075 Sum_probs=133.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hh-----------cCchhHHHhhCCCcchhHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KE-----------GQSASEKKEVAPAPEMAEL 71 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~ 71 (186)
+.+..++.+|.++...|++++|+..|+++++++|+++.++..+|.+. .. ++.+.+...+.......|.
T Consensus 37 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~ 116 (217)
T 2pl2_A 37 QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR 116 (217)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc
Confidence 34678999999999999999999999999999999999999999887 44 5556665555444444455
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
.+.++..+|.++...|++++|+..|+++++++ +++.+++.+|.++..+|++++|+..|+++++++|+++.++..++.++
T Consensus 117 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~ 195 (217)
T 2pl2_A 117 YAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASAL 195 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 66999999999999999999999999999999 99999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhhccccccchhhhhc
Q 044796 152 KEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~ 172 (186)
.. .|++++|+..|+++
T Consensus 196 ~~-----~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 196 LL-----KGKAEEAARAAALE 211 (217)
T ss_dssp TC-------------------
T ss_pred HH-----ccCHHHHHHHHHHH
Confidence 88 99999999999876
No 6
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.91 E-value=3.8e-24 Score=146.24 Aligned_cols=173 Identities=13% Similarity=0.113 Sum_probs=147.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccC-CChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVAS-VPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.++.++.+|.+++..|++++|+.+|+++++++| .+..+++.+|.+. ..++.+.+...+.......|..+.++..+|.+
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 368899999999999999999999999999999 8888888888887 55666665555444334444456999999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccH-------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYM-------KALIRRAEAHEKLEHFEEAIADMKKILEFDPS--NNQAKRTILRKLKE 153 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~ 153 (186)
+..+|++++|+..++++++.+|+++ .++..+|.++...|++++|+..|+++++++|+ ++.++..+|.++..
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 165 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYN 165 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Confidence 9999999999999999999999998 67999999999999999999999999999999 99999999999988
Q ss_pred HHHH----------------------hhccccccchhhhhcccCCC
Q 044796 154 MGNS----------------------ILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 154 ~~~~----------------------~~~~~~~A~~~~~~~~~~~~ 177 (186)
.|.. ..+.+++|+.+|++++..+|
T Consensus 166 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 211 (228)
T 4i17_A 166 NGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSP 211 (228)
T ss_dssp HHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 7765 12345889999998864333
No 7
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.91 E-value=1.6e-24 Score=158.64 Aligned_cols=167 Identities=9% Similarity=-0.007 Sum_probs=146.5
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcC-chhHHHhhCCCcchhHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQ-SASEKKEVAPAPEMAELRSICHSNRGI 81 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~ 81 (186)
+.++.+..+|.++...|++++|+..|++++.++|++..+|..+|.++ ..+. .+.+...+.......|.+..+|.++|.
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~ 174 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRV 174 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999887 4454 666666555555555556699999999
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcc
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 161 (186)
++..+|++++|+.+|++++.++|++..+|+.+|.++..+|++++|+.+|+++++++|++..+|.++|.++.. ++.
T Consensus 175 ~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~-----l~~ 249 (382)
T 2h6f_A 175 LVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN-----TTG 249 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTC
T ss_pred HHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----hcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998877 444
Q ss_pred c-ccc-----chhhhhcccC
Q 044796 162 F-GMS-----TDNFKAVKDP 175 (186)
Q Consensus 162 ~-~~A-----~~~~~~~~~~ 175 (186)
+ ++| +.+|++++..
T Consensus 250 ~~~eA~~~~el~~~~~Al~l 269 (382)
T 2h6f_A 250 YNDRAVLEREVQYTLEMIKL 269 (382)
T ss_dssp SCSHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 4 677 4888888533
No 8
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.91 E-value=3.4e-23 Score=139.96 Aligned_cols=157 Identities=12% Similarity=0.099 Sum_probs=133.1
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.++.++..|..++..|++++|+.+|+++++.+|+++.+++..+... .....+.....+|.++.
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-----------------~~~~~~~~~~~lg~~~~ 65 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDK-----------------NSEISSKLATELALAYK 65 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCT-----------------TSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcc-----------------hhhhhHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999887776533211 11123456677999999
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH--------
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGN-------- 156 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~-------- 156 (186)
..|++++|+..|+++++++|+++.+++.+|.++...|++++|+..|+++++++|+++.++..+|.++...|.
T Consensus 66 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 145 (208)
T 3urz_A 66 KNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLET 145 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988755442
Q ss_pred ----------------------HhhccccccchhhhhcccCCCC
Q 044796 157 ----------------------SILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 157 ----------------------~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
...|++++|+.+|++++..+|+
T Consensus 146 ~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 189 (208)
T 3urz_A 146 DYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPS 189 (208)
T ss_dssp HHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCC
T ss_pred HHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 1256788999999998755544
No 9
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.91 E-value=2.1e-24 Score=138.78 Aligned_cols=127 Identities=12% Similarity=0.042 Sum_probs=113.5
Q ss_pred hHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHH
Q 044796 12 EGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEE 91 (186)
Q Consensus 12 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (186)
+|.++...|++++|+..+++++..+|+ .+..++.+|.+|...|++++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~---------------------------------~~~~~~~la~~y~~~~~~~~ 49 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ---------------------------------KSIKGFYFAKLYYEAKEYDL 49 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH---------------------------------HHTTHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc---------------------------------cHHHHHHHHHHHHHcCCHHH
Confidence 688888999999999999999998888 44778899999999999999
Q ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhh-h
Q 044796 92 SIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNF-K 170 (186)
Q Consensus 92 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~-~ 170 (186)
|+.+|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|+++.++..+|.++.. .+++++|.+.| +
T Consensus 50 A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-----~~~~~~aa~~~~~ 124 (150)
T 4ga2_A 50 AKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCK-----NDVTDGRAKYWVE 124 (150)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----HCSSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----cCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999888764 7
Q ss_pred hcc--cCC
Q 044796 171 AVK--DPN 176 (186)
Q Consensus 171 ~~~--~~~ 176 (186)
+++ +|+
T Consensus 125 ~al~l~P~ 132 (150)
T 4ga2_A 125 RAAKLFPG 132 (150)
T ss_dssp HHHHHSTT
T ss_pred HHHHhCcC
Confidence 775 554
No 10
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.90 E-value=8.1e-23 Score=130.41 Aligned_cols=130 Identities=23% Similarity=0.286 Sum_probs=114.8
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
+..+..++..|+.++..|+|++|+.+|+++|+++|+++..- .....+.++.+|.++|.+
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---------------------a~~~~~~~a~a~~n~g~a 66 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---------------------AFDHAGFDAFCHAGLAEA 66 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---------------------CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---------------------hhhhccchHHHHHHHHHH
Confidence 46788999999999999999999999999999999965430 112233456799999999
Q ss_pred HhhhccHHHHHHHHHHHHhc-------CcccHHHH----HHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALEL-------NPTYMKAL----IRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~-------~p~~~~~~----~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
+..+|+|++|+.+|++++++ +|+++.+| +++|.++..+|++++|+.+|+++++++|++..+...+..+.
T Consensus 67 l~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~ 146 (159)
T 2hr2_A 67 LAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMM 146 (159)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999999999999999999 99999999 99999999999999999999999999999988877777655
Q ss_pred HH
Q 044796 152 KE 153 (186)
Q Consensus 152 ~~ 153 (186)
..
T Consensus 147 ~~ 148 (159)
T 2hr2_A 147 EV 148 (159)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 11
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.89 E-value=2.9e-22 Score=128.74 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=108.5
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+..++.+|.+++..|++++|+.+|+++++++|++ +.+|..+|.++
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~---------------------------------~~a~~~lg~~~ 75 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD---------------------------------PKAHRFLGLLY 75 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------------------------HHHHHHHHHHH
Confidence 456678899999999999999999999999999993 38999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHH-HHHHHhcCCCChHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIAD-MKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~-~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
...|++++|+.+|+++++++|+++.+++.+|.++...|++++|... ++++++++|+++.++..++.++..
T Consensus 76 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~ 146 (150)
T 4ga2_A 76 ELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDC 146 (150)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred HHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887765 599999999999999999888776
No 12
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.89 E-value=1.9e-21 Score=126.27 Aligned_cols=131 Identities=25% Similarity=0.332 Sum_probs=113.5
Q ss_pred hhhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc--------CCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHH
Q 044796 2 ALNEANEAKLEGNKLFAEGKYEEALLQYEVALRVA--------SVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRS 73 (186)
Q Consensus 2 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (186)
+++.+..+...|..++..|+|++|+.+|.+++.+. |.++.. ....+...
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 63 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEW-----------------------VELDRKNI 63 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHH-----------------------HHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHH-----------------------HHHHHHHH
Confidence 46789999999999999999999999999999983 332110 11134456
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN-QAKRTILRKLK 152 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~~~l~~~~~ 152 (186)
.++.++|.++..+|++++|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++ .+...+..+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999 77888887776
Q ss_pred HHH
Q 044796 153 EMG 155 (186)
Q Consensus 153 ~~~ 155 (186)
.+.
T Consensus 144 ~~~ 146 (162)
T 3rkv_A 144 RRA 146 (162)
T ss_dssp HHH
T ss_pred HHH
Confidence 633
No 13
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.89 E-value=9.9e-23 Score=149.14 Aligned_cols=164 Identities=9% Similarity=0.009 Sum_probs=142.6
Q ss_pred hHHHHHHHhHhHHHHccc-HHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGK-YEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGI 81 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 81 (186)
+.+..|+.+|.++...|+ +++|+.+|++++.++|++..+|..+|.++ ..++...+...+.......|.+..+|.++|.
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~ 208 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQW 208 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHH
Confidence 346789999999999997 99999999999999999999999999887 5566666655554444444555699999999
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-hcCHHHH-----HHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEK-LEHFEEA-----IADMKKILEFDPSNNQAKRTILRKLKEMG 155 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A-----~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 155 (186)
++..+|++++|+.+|+++++++|++..+|+.+|.++.. .|.+++| +.+|++++.++|++..+|..++.++..
T Consensus 209 ~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~-- 286 (382)
T 2h6f_A 209 VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQD-- 286 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTT--
T ss_pred HHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHc--
Confidence 99999999999999999999999999999999999999 5555777 599999999999999999999988887
Q ss_pred HHhhc--cccccchhhhhc
Q 044796 156 NSILG--RFGMSTDNFKAV 172 (186)
Q Consensus 156 ~~~~~--~~~~A~~~~~~~ 172 (186)
.| ++++|++.+..+
T Consensus 287 ---~g~~~~~~a~~~~~~~ 302 (382)
T 2h6f_A 287 ---RGLSKYPNLLNQLLDL 302 (382)
T ss_dssp ---TCGGGCHHHHHHHHHH
T ss_pred ---cCccchHHHHHHHHHh
Confidence 55 678888888766
No 14
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.88 E-value=2.1e-22 Score=140.30 Aligned_cols=171 Identities=13% Similarity=0.179 Sum_probs=145.4
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCC---hhhhhccchhh-hhcCchhHHHhhCCCcchh---HHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVP---ERAESASAPEA-KEGQSASEKKEVAPAPEMA---ELRSICH 76 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~ 76 (186)
..++.++.+|..++..|++++|+..|+++++.+|.+ +.+++.+|.++ ..++...+...+....... +..+.++
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 357889999999999999999999999999999999 88899999887 5566655555443322221 2345889
Q ss_pred HHHHHHHhh--------hccHHHHHHHHHHHHhcCcccHHHH-----------------HHHHHHHHHhcCHHHHHHHHH
Q 044796 77 SNRGICFLK--------LGKFEESIKECTKALELNPTYMKAL-----------------IRRAEAHEKLEHFEEAIADMK 131 (186)
Q Consensus 77 ~~~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~lg~~~~~~g~~~~A~~~~~ 131 (186)
+.+|.++.. .|++++|+..|++++..+|+++.+. +.+|.++...|++++|+..|+
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 172 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYE 172 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 999999999 9999999999999999999886655 889999999999999999999
Q ss_pred HHHhcCCC---ChHHHHHHHHHHHHHHHH-----hhccccccchhhhhccc
Q 044796 132 KILEFDPS---NNQAKRTILRKLKEMGNS-----ILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 132 ~al~~~p~---~~~~~~~l~~~~~~~~~~-----~~~~~~~A~~~~~~~~~ 174 (186)
++++..|+ .+.++..+|.++..+|.. ..|++++|+..|++++.
T Consensus 173 ~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 173 AVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 99999998 567899999999997765 23999999999998863
No 15
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.6e-22 Score=135.84 Aligned_cols=164 Identities=18% Similarity=0.249 Sum_probs=99.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHH-------HHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELR-------SIC 75 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~ 75 (186)
..++.+..+|.+++..|++++|+.+|+++++.+ .++.++..+|.+. ..++.+.+...+.......|.. +.+
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 81 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKS 81 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHH
Confidence 356667777777777777777777777777766 6666666666555 3344443333332222222211 456
Q ss_pred HHHHHHHHhhhccHHHHHHHHHHHHh--------------------------cCcccHHHHHHHHHHHHHhcCHHHHHHH
Q 044796 76 HSNRGICFLKLGKFEESIKECTKALE--------------------------LNPTYMKALIRRAEAHEKLEHFEEAIAD 129 (186)
Q Consensus 76 ~~~~a~~~~~~~~~~~A~~~~~~al~--------------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 129 (186)
+..+|.++...|++++|+..+++++. .+|.++.++..+|.++...|++++|+..
T Consensus 82 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 161 (258)
T 3uq3_A 82 FARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKA 161 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHH
Confidence 66666666666666666666666666 5555566666666666666666666666
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 130 MKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 130 ~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
|+++++.+|.++.++..+|.++.. .|++++|+..|++++
T Consensus 162 ~~~a~~~~~~~~~~~~~l~~~~~~-----~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 162 YTEMIKRAPEDARGYSNRAAALAK-----LMSFPEAIADCNKAI 200 (258)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHhcCcccHHHHHHHHHHHHH-----hCCHHHHHHHHHHHH
Confidence 666666666666666666666665 666666666666554
No 16
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.5e-21 Score=120.54 Aligned_cols=117 Identities=26% Similarity=0.456 Sum_probs=110.3
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..++.++.+|..++..|++++|+.+|+++++++|++ +.++..+|.++
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------------------------~~~~~~~a~~~ 48 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------------------------ARGYSNRAAAL 48 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------------------------hHHHHHHHHHH
Confidence 468899999999999999999999999999999993 38899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------CCChHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFD------PSNNQAKRTILRKLKE 153 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~ 153 (186)
..+|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++ |.+..++..+..+...
T Consensus 49 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 49 AKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 9999999988876654
No 17
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.88 E-value=8.8e-23 Score=153.58 Aligned_cols=161 Identities=16% Similarity=0.159 Sum_probs=139.4
Q ss_pred HHHHHHHhHhHHHHcccH-HHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHH----HhhCCCcchhHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKY-EEALLQYEVALRVASVPERAESASAPEA-KEGQSASEK----KEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 78 (186)
.+..++.+|.++...|++ ++|+.+|+++++++|+++.++..+|.++ ..++.+.+. +++...|. ..++..
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~ 175 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-----KVSLQN 175 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-----HHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----HHHHHH
Confidence 467889999999999999 9999999999999999999999999887 445554444 44555553 388899
Q ss_pred HHHHHhhh---------ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHh--------cCHHHHHHHHHHHHhcCC---
Q 044796 79 RGICFLKL---------GKFEESIKECTKALELNPTYMKALIRRAEAHEKL--------EHFEEAIADMKKILEFDP--- 138 (186)
Q Consensus 79 ~a~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------g~~~~A~~~~~~al~~~p--- 138 (186)
+|.++... |++++|+..++++++++|+++.+|+.+|.++..+ |++++|+..|+++++++|
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 255 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKAS 255 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcc
Confidence 99999999 9999999999999999999999999999999999 999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 139 SNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
.++.++..+|.++.. .|++++|+..|++++..
T Consensus 256 ~~~~~~~~lg~~~~~-----~g~~~~A~~~~~~al~l 287 (474)
T 4abn_A 256 SNPDLHLNRATLHKY-----EESYGEALEGFSQAAAL 287 (474)
T ss_dssp GCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHh
Confidence 899999999998888 89999999999988533
No 18
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.88 E-value=2.3e-21 Score=124.39 Aligned_cols=105 Identities=9% Similarity=0.092 Sum_probs=81.4
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.++.++.+|..++..|++++|+.+|++++.++|. ++.+|..+|.++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~---------------------------------~~~~~~~lg~~~ 80 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY---------------------------------NVDYIMGLAAIY 80 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------------------------CHHHHHHHHHHH
Confidence 45667777788888888888888888888888777 236777778888
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN 141 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 141 (186)
..+|++++|+.+|+++++++|+++.+++++|.++..+|++++|+..|++++++.|+.+
T Consensus 81 ~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 81 QIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 8888888888888888888888888888888888888888888888888888777654
No 19
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.88 E-value=3.2e-23 Score=133.05 Aligned_cols=99 Identities=11% Similarity=-0.049 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
++.+++.+|.++...|++++|+..|++++.++|+++.+|+.+|.++..+|++++|+..|+++++++|+++.+++++|.++
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~ 114 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHH
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhhhcccC
Q 044796 152 KEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
.. +|++++|+.+|++++..
T Consensus 115 ~~-----lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 115 LR-----LKAPLKAKECFELVIQH 133 (151)
T ss_dssp HH-----TTCHHHHHHHHHHHHHH
T ss_pred HH-----cCCHHHHHHHHHHHHHh
Confidence 99 99999999999998643
No 20
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.88 E-value=5.1e-22 Score=145.42 Aligned_cols=164 Identities=21% Similarity=0.162 Sum_probs=112.2
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|.++...|++++|+.+|++++..+|++..++..+|... ..++.+.+...+.......|....++..+|.++
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 145 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLL 145 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 3567888888899999999999999999999998888888887765 445554444433322222333346666677777
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcccc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFG 163 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (186)
...|++++|+..|++++..+|+++.++..+|.++...|++++|+..|+++++++|++..++..+|.++.. .++++
T Consensus 146 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-----~~~~~ 220 (388)
T 1w3b_A 146 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE-----ARIFD 220 (388)
T ss_dssp HTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-----TTCTT
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-----cCCHH
Confidence 7777777777777777777777777777777777777777777777777777777666666666666555 55555
Q ss_pred ccchhhhhcc
Q 044796 164 MSTDNFKAVK 173 (186)
Q Consensus 164 ~A~~~~~~~~ 173 (186)
+|+..|++++
T Consensus 221 ~A~~~~~~al 230 (388)
T 1w3b_A 221 RAVAAYLRAL 230 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555553
No 21
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.88 E-value=9.3e-22 Score=134.96 Aligned_cols=167 Identities=17% Similarity=0.067 Sum_probs=141.7
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|.++...|++++|+.+|+++++.+|.+..++..++.+. ..++.+.+...+.......+..+.++..+|.++
T Consensus 56 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 56 DAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4677888999999999999999999999999999999998888876 455555555544433333334458899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcccc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFG 163 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (186)
...|++++|+..++++++.+|+++.++..+|.++...|++++|+..|++++..+|+++.++..++.++.. .|+++
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~ 210 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY-----KENRE 210 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCTT
T ss_pred HHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-----ccCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988888 99999
Q ss_pred ccchhhhhcccCC
Q 044796 164 MSTDNFKAVKDPN 176 (186)
Q Consensus 164 ~A~~~~~~~~~~~ 176 (186)
+|+..|++++..+
T Consensus 211 ~A~~~~~~~~~~~ 223 (243)
T 2q7f_A 211 KALEMLDKAIDIQ 223 (243)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccC
Confidence 9999999886433
No 22
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.88 E-value=1.1e-21 Score=143.57 Aligned_cols=163 Identities=16% Similarity=0.142 Sum_probs=97.7
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
+..+..+|.++...|++++|+..|+++++++|+++.++..+|.+. ..+..+.+...+.......|.++.++..+|.++.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 455666677777777777777777777777777776666666555 3333333333222222222233356666666666
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccc
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGM 164 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 164 (186)
..|++++|+..++++++.+|+++.++..+|.++...|++++|+..|+++++++|.++.++..++.++.. .|++++
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-----~g~~~~ 323 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-----QGNIEE 323 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-----TTCHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-----cCCHHH
Confidence 666666666666666666666666666666666666666666666666666666666666666655555 555555
Q ss_pred cchhhhhcc
Q 044796 165 STDNFKAVK 173 (186)
Q Consensus 165 A~~~~~~~~ 173 (186)
|+..|++++
T Consensus 324 A~~~~~~al 332 (388)
T 1w3b_A 324 AVRLYRKAL 332 (388)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 555555554
No 23
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.88 E-value=7e-22 Score=143.54 Aligned_cols=164 Identities=16% Similarity=0.192 Sum_probs=130.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHh----hCCCcc------------
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKE----VAPAPE------------ 67 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~------------ 67 (186)
.+..+..+|.++...|++++|+.+|+++++++|+++.++..+|.++ ..++.+.+... +...|.
T Consensus 98 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 177 (365)
T 4eqf_A 98 DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSP 177 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC--------
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccch
Confidence 3566778888888888888888888888888888888877777655 33333222221 111111
Q ss_pred ----------------------------hhHH--HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 044796 68 ----------------------------MAEL--RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAH 117 (186)
Q Consensus 68 ----------------------------~~~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 117 (186)
..|. .+.++..+|.++...|++++|+..++++++.+|+++.++..+|.++
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 257 (365)
T 4eqf_A 178 GLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATL 257 (365)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 1111 4578889999999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 118 EKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 118 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
...|++++|+..|+++++++|+++.++..+|.++.. .|++++|+..|++++
T Consensus 258 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-----~g~~~~A~~~~~~al 308 (365)
T 4eqf_A 258 ANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN-----LGAYREAVSNFLTAL 308 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----HTCCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-----CCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988 899999999998885
No 24
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.88 E-value=6.9e-22 Score=130.01 Aligned_cols=165 Identities=18% Similarity=0.237 Sum_probs=147.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
..+..+..+|..+...|++++|+..|+++++.+|.++.++..+|.+. ..++.+.+...+.......+..+.++..+|.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 85 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLT 85 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999998876 55666555555443333344456899999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRF 162 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
+...|++++|+..+++++..+|.++.++..+|.++...|++++|+..++++++..|.++.++..++.++.. .|++
T Consensus 86 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~ 160 (186)
T 3as5_A 86 YVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ-----MGRH 160 (186)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCH
T ss_pred HHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-----cCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cccchhhhhcc
Q 044796 163 GMSTDNFKAVK 173 (186)
Q Consensus 163 ~~A~~~~~~~~ 173 (186)
++|+..+++++
T Consensus 161 ~~A~~~~~~~~ 171 (186)
T 3as5_A 161 EEALPHFKKAN 171 (186)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 25
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.3e-22 Score=137.57 Aligned_cols=163 Identities=17% Similarity=0.185 Sum_probs=137.7
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCC-------hhhhhccchhh-hhcCchhHHHhhCCCcc----------
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVP-------ERAESASAPEA-KEGQSASEKKEVAPAPE---------- 67 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------- 67 (186)
+..+..+|.++...|++++|+.+|+++++.+|.+ +.++..+|.+. ..++.+.+...+.....
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 117 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTK 117 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHH
Confidence 4567888888888888888888888888888876 56777777665 44444443333222111
Q ss_pred ----------------hhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHH
Q 044796 68 ----------------MAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMK 131 (186)
Q Consensus 68 ----------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (186)
..|..+.++..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..|+
T Consensus 118 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 197 (258)
T 3uq3_A 118 LRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCN 197 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3455678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 132 KILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 132 ~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
++++.+|+++.++..+|.++.. .|++++|+..|++++
T Consensus 198 ~al~~~~~~~~~~~~l~~~~~~-----~g~~~~A~~~~~~a~ 234 (258)
T 3uq3_A 198 KAIEKDPNFVRAYIRKATAQIA-----VKEYASALETLDAAR 234 (258)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999885
No 26
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.87 E-value=1.6e-21 Score=132.07 Aligned_cols=165 Identities=20% Similarity=0.121 Sum_probs=134.4
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
..+..+..+|..++..|++++|+.+|+++++.+|.++.++..+|.+. ..++.+.+...+.......+..+.++..+|.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 85 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWF 85 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 56778888999999999999999999999999999888888888776 44555555544433333333445788888999
Q ss_pred Hhhh-ccHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhh
Q 044796 83 FLKL-GKFEESIKECTKALE--LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSIL 159 (186)
Q Consensus 83 ~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 159 (186)
+... |++++|+..++++++ .+|..+.++..+|.++...|++++|+..++++++..|.++.++..++.++.. .
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-----~ 160 (225)
T 2vq2_A 86 LCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKML-----A 160 (225)
T ss_dssp HHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-----H
T ss_pred HHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH-----c
Confidence 9999 999999999999988 6677788888999999999999999999999999999988888888888888 8
Q ss_pred ccccccchhhhhcc
Q 044796 160 GRFGMSTDNFKAVK 173 (186)
Q Consensus 160 ~~~~~A~~~~~~~~ 173 (186)
|++++|+..+++++
T Consensus 161 ~~~~~A~~~~~~~~ 174 (225)
T 2vq2_A 161 GQLGDADYYFKKYQ 174 (225)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 88888888888775
No 27
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.87 E-value=1.8e-21 Score=146.43 Aligned_cols=161 Identities=14% Similarity=0.140 Sum_probs=138.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhh----------cCchhHHHhhCCCcchhHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKE----------GQSASEKKEVAPAPEMAELRSI 74 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 74 (186)
.+..+..+|.++...|++++|+.+|+++++++|+ ..++..+|.++.. ++.+.+...+.......|.++.
T Consensus 136 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 214 (474)
T 4abn_A 136 LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR 214 (474)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHH
Confidence 4678999999999999999999999999999999 6888888887733 4445555444443344445569
Q ss_pred HHHHHHHHHhhh--------ccHHHHHHHHHHHHhcCc---ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 75 CHSNRGICFLKL--------GKFEESIKECTKALELNP---TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 75 ~~~~~a~~~~~~--------~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
+|..+|.++... |++++|+..|+++++++| +++.+++.+|.++..+|++++|+..|+++++++|+++.+
T Consensus 215 ~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a 294 (474)
T 4abn_A 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEP 294 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999 999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhhh
Q 044796 144 KRTILRKLKEMGNSILGRFGMSTDNFKA 171 (186)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~~~A~~~~~~ 171 (186)
+..++.++.. ++++++|++.+.+
T Consensus 295 ~~~l~~~~~~-----lg~~~eAi~~~~~ 317 (474)
T 4abn_A 295 QQREQQLLEF-----LSRLTSLLESKGK 317 (474)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHTTT
T ss_pred HHHHHHHHHH-----HHHHHHHHHHhcc
Confidence 9999999999 6666666665543
No 28
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.87 E-value=2.5e-21 Score=120.77 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 70 ELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 70 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
|..+..+..+|..+++.|+|++|+..|+++++++|+++.++..+|.++..+|++++|+..|+++++++|+++.++..+|.
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhhhcccCCCCc
Q 044796 150 KLKEMGNSILGRFGMSTDNFKAVKDPNTGA 179 (186)
Q Consensus 150 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 179 (186)
++.. +|++++|+..|++++..+|+.
T Consensus 90 ~~~~-----~~~~~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 90 CLVA-----MREWSKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HHHH-----TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHH-----CCCHHHHHHHHHHHHHHCcCC
Confidence 9999 999999999999996444433
No 29
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.86 E-value=2.4e-21 Score=140.68 Aligned_cols=165 Identities=12% Similarity=0.058 Sum_probs=137.1
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
+..++.+|..++..|++++|+.+|+++++.+|+++.++..+|.++ ..++.+.+...+.......|..+.++..+|.++.
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYT 144 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 345899999999999999999999999999999999999999887 5566666665554444444445688888888888
Q ss_pred hhccHHHHHHHHHHHHhcCcc----------------------------------------------cHHHHHHHHHHHH
Q 044796 85 KLGKFEESIKECTKALELNPT----------------------------------------------YMKALIRRAEAHE 118 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~----------------------------------------------~~~~~~~lg~~~~ 118 (186)
..|++++|+..++++++.+|+ ++.++..+|.++.
T Consensus 145 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~ 224 (365)
T 4eqf_A 145 NTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH 224 (365)
T ss_dssp HTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH
Confidence 888888888888887776654 6778888899999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 119 KLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 119 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
..|++++|+..|+++++++|+++.++..+|.++.. .|++++|+..|++++..
T Consensus 225 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-----~g~~~~A~~~~~~al~~ 276 (365)
T 4eqf_A 225 LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-----GDRSEEAVEAYTRALEI 276 (365)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999988888 88899999999888643
No 30
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.86 E-value=1.6e-20 Score=117.26 Aligned_cols=110 Identities=21% Similarity=0.314 Sum_probs=99.2
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+.++.++|+.++..|+|++|+.+|+++++++|++ +.+|.++|.++
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~---------------------------------~~~~~nlg~~~ 52 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN---------------------------------ITFYNNKAAVY 52 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------------------------HHHHHhHHHHH
Confidence 568889999999999999999999999999999993 38899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCccc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTY-------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
..+|++++|+..++++++++|++ ..++.++|.++..+|++++|+..|++++..+|+ ++....+
T Consensus 53 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l 122 (127)
T 4gcn_A 53 FEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKV 122 (127)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHH
Confidence 99999999999999999998876 358899999999999999999999999999885 5554443
No 31
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.86 E-value=2.8e-21 Score=134.82 Aligned_cols=165 Identities=12% Similarity=0.050 Sum_probs=138.8
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHH----HhhCCCcchhHHHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEK----KEVAPAPEMAELRSICHSNRG 80 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~a 80 (186)
++.++..|.+++..|++++|+..|+++++.+|.++.++..+|.+. ..++.+.+. .++. .+......+.++..+|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYG 81 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999877 445554444 3344 3333333467799999
Q ss_pred HHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhc
Q 044796 81 ICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILG 160 (186)
Q Consensus 81 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~ 160 (186)
.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..|+++++++|.++.++..+|..... .+
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-----~~ 156 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-----NK 156 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-----TT
T ss_pred HHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-----HH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999943333 45
Q ss_pred cccccchhhhhcccCC
Q 044796 161 RFGMSTDNFKAVKDPN 176 (186)
Q Consensus 161 ~~~~A~~~~~~~~~~~ 176 (186)
++++|+..|++++...
T Consensus 157 ~~~~A~~~~~~a~~~~ 172 (272)
T 3u4t_A 157 EYVKADSSFVKVLELK 172 (272)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8889999998886433
No 32
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.86 E-value=3.3e-21 Score=133.15 Aligned_cols=163 Identities=16% Similarity=0.040 Sum_probs=88.4
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcc--hhHHHHHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPE--MAELRSICHSNRGIC 82 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~ 82 (186)
+..+..+|.++...|++++|+.+|+++++.+|.+..++..++.++ ..++.+.+...+..... ..+..+.++..+|.+
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~ 150 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLV 150 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHH
Confidence 344555555555555555555555555555555555555555444 33333333332221111 222334555556666
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRF 162 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
+...|++++|+..++++++.+|.++.++..+|.++...|++++|+..++++++..|.+..++..++.++.. .|++
T Consensus 151 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~ 225 (252)
T 2ho1_A 151 SLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKV-----FEDR 225 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-----TTCH
T ss_pred HHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-----ccCH
Confidence 66666666666666666666665566666666666666666666666666666666655555555555555 5566
Q ss_pred cccchhhhhcc
Q 044796 163 GMSTDNFKAVK 173 (186)
Q Consensus 163 ~~A~~~~~~~~ 173 (186)
++|...+++++
T Consensus 226 ~~A~~~~~~~~ 236 (252)
T 2ho1_A 226 DTAASYGLQLK 236 (252)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666665553
No 33
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.86 E-value=1.3e-20 Score=133.21 Aligned_cols=164 Identities=16% Similarity=0.099 Sum_probs=149.5
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.++.++.+|..+...|++++|+..|+++++.+|+++.++..+|.++ ..++.+.+...+.......|.........+..+
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 4577899999999999999999999999999999999999999887 678888888888887777766666777777888
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--hHHHHHHHHHHHHHHHHhhcc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN--NQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~~~~~ 161 (186)
...++.++|+..+++++..+|+++.+++.+|.++...|++++|+..|.++++.+|++ ..++..++.++.. .|+
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~-----~g~ 270 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA-----LGT 270 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH-----HCT
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH-----cCC
Confidence 889999999999999999999999999999999999999999999999999999998 8899999999999 899
Q ss_pred ccccchhhhhcc
Q 044796 162 FGMSTDNFKAVK 173 (186)
Q Consensus 162 ~~~A~~~~~~~~ 173 (186)
.++|+..|.+++
T Consensus 271 ~~~a~~~~r~al 282 (287)
T 3qou_A 271 GDALASXYRRQL 282 (287)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCcHHHHHHHHH
Confidence 999999888764
No 34
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.86 E-value=9.3e-21 Score=130.87 Aligned_cols=169 Identities=14% Similarity=0.103 Sum_probs=149.1
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..++.+|..+...|++++|+.+|+++++.+|.++.++..+|.+. ..++.+.+...+.......+..+.++..+|.++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999877 556666555554433333344568999999999
Q ss_pred hhhccHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcc
Q 044796 84 LKLGKFEESIKECTKALE--LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 161 (186)
...|++++|+..+++++. .+|.++.++..+|.++...|++++|+..|+++++.+|.++.++..++.++.. .|+
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-----~g~ 190 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYK-----ERE 190 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-----TTC
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-----cCC
Confidence 999999999999999999 8899999999999999999999999999999999999999999999999999 999
Q ss_pred ccccchhhhhcccCCCC
Q 044796 162 FGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 162 ~~~A~~~~~~~~~~~~~ 178 (186)
+++|+..+++++...+.
T Consensus 191 ~~~A~~~~~~~~~~~~~ 207 (252)
T 2ho1_A 191 YVPARQYYDLFAQGGGQ 207 (252)
T ss_dssp HHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 99999999988654433
No 35
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.86 E-value=6.9e-22 Score=135.60 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=129.5
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..++.+|..++..|++++|+.+|+++++.+|.+..++..+|.+. ..++.+.+...+.......+..+.++..+|.++
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 101 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVY 101 (243)
T ss_dssp --------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4677899999999999999999999999999999999999999877 556665555554433333444568999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcccc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFG 163 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (186)
...|++++|+..++++++.+|.++.++..+|.++...|++++|+..++++++..|.++.++..++.++.. .|+++
T Consensus 102 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~ 176 (243)
T 2q7f_A 102 VVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN-----EGMLD 176 (243)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----HTCCH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-----cCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 99999
Q ss_pred ccchhhhhcccC
Q 044796 164 MSTDNFKAVKDP 175 (186)
Q Consensus 164 ~A~~~~~~~~~~ 175 (186)
+|+..|++++..
T Consensus 177 ~A~~~~~~~~~~ 188 (243)
T 2q7f_A 177 EALSQFAAVTEQ 188 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999988643
No 36
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.86 E-value=7.2e-21 Score=137.10 Aligned_cols=89 Identities=20% Similarity=0.149 Sum_probs=46.2
Q ss_pred HHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhh
Q 044796 80 GICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSIL 159 (186)
Q Consensus 80 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 159 (186)
|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++.+|.++.++..++.++.. .
T Consensus 127 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-----~ 201 (359)
T 3ieg_A 127 ALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQ-----L 201 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH-----H
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----c
Confidence 34444445555555555555555555555555555555555555555555555555555555555555555544 5
Q ss_pred ccccccchhhhhcc
Q 044796 160 GRFGMSTDNFKAVK 173 (186)
Q Consensus 160 ~~~~~A~~~~~~~~ 173 (186)
|++++|+..|++++
T Consensus 202 ~~~~~A~~~~~~a~ 215 (359)
T 3ieg_A 202 GDHELSLSEVRECL 215 (359)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 55555555555543
No 37
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.86 E-value=5.2e-21 Score=125.86 Aligned_cols=162 Identities=16% Similarity=0.116 Sum_probs=139.5
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.+.++..|..+...|++++|+..|+++++.+|+++.++..+|.++ ..++.+.+...+.......| ++..+...+.+..
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~ 84 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLEL 84 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHH
Confidence 345788999999999999999999999999999999999999887 66777888888877776666 5555555554432
Q ss_pred -hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--hHHHHHHHHHHHHHHHHhhcc
Q 044796 85 -KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN--NQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 85 -~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~~~~~ 161 (186)
..+...+|+..++++++.+|+++.+++.+|.++...|++++|+..|+++++.+|+. +.++..++.++.. .|+
T Consensus 85 ~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~-----~g~ 159 (176)
T 2r5s_A 85 HQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSA-----LGQ 159 (176)
T ss_dssp HHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHH-----HCS
T ss_pred HhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHH-----hCC
Confidence 33344568999999999999999999999999999999999999999999999975 5699999999999 999
Q ss_pred ccccchhhhhcc
Q 044796 162 FGMSTDNFKAVK 173 (186)
Q Consensus 162 ~~~A~~~~~~~~ 173 (186)
.++|+..|++++
T Consensus 160 ~~~A~~~y~~al 171 (176)
T 2r5s_A 160 GNAIASKYRRQL 171 (176)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCcHHHHHHHHH
Confidence 999999998764
No 38
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.86 E-value=3.9e-21 Score=137.23 Aligned_cols=168 Identities=17% Similarity=0.134 Sum_probs=121.8
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
+..+..+|.++...|++++|+.+|+++++..|.+..++..+|.+. ..++.+.+...+.......|..+.++..+|.++.
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 204 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAF 204 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 345666777777777777777777777777777666666666655 3344444433332222222334477888888888
Q ss_pred hhccHHHHHHHHHHHHhcC---------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 044796 85 KLGKFEESIKECTKALELN---------PTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMG 155 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~---------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 155 (186)
..|++++|+..+++++... |..+.++..+|.++...|++++|+..|+++++++|+++.++..++.++..
T Consensus 205 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-- 282 (330)
T 3hym_B 205 QNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSL-- 282 (330)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH--
T ss_pred HcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHH--
Confidence 8888888888888888875 66677888888888888888888888888888888888888888888888
Q ss_pred HHhhccccccchhhhhcccCCCC
Q 044796 156 NSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 156 ~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
.|++++|+..|++++..+|.
T Consensus 283 ---~g~~~~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 283 ---MGNFENAVDYFHTALGLRRD 302 (330)
T ss_dssp ---HTCHHHHHHHHHTTTTTCSC
T ss_pred ---hccHHHHHHHHHHHHccCCC
Confidence 88888888888888644443
No 39
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.86 E-value=3.6e-20 Score=120.45 Aligned_cols=121 Identities=23% Similarity=0.304 Sum_probs=109.2
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
...+..++.+|.+++..|++++|+.+|+++++++|. ++.++..+|.+
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------------------------------~~~~~~~l~~~ 54 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA---------------------------------NPIYLSNRAAA 54 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------------------------CHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc---------------------------------CHHHHHHHHHH
Confidence 357889999999999999999999999999999999 23889999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH--HHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL--RKLKEMGN 156 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~--~~~~~~~~ 156 (186)
+...|++++|+..|++++.++|+++.+++.+|.++..+|++++|+.+|+++++++|+++.++...+ .+...++.
T Consensus 55 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~ 130 (164)
T 3sz7_A 55 YSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEE 130 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998655554 34444333
No 40
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.86 E-value=2.4e-20 Score=119.47 Aligned_cols=117 Identities=13% Similarity=0.101 Sum_probs=105.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+..++.+|..++..|++++|+..|++++..+|.+ +.+|..+|.++
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------------------------~~~~~~lg~~~ 65 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD---------------------------------SRFFLGLGACR 65 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc---------------------------------HHHHHHHHHHH
Confidence 457789999999999999999999999999999993 37889999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
...|++++|+..|++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++........+...
T Consensus 66 ~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 135 (148)
T 2vgx_A 66 QAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSM 135 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988775554444333
No 41
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.86 E-value=3.2e-20 Score=120.27 Aligned_cols=132 Identities=24% Similarity=0.409 Sum_probs=120.6
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.+.+..++.+|..++..|++++|+.+|.++++.+|.+ +.++..+|.+
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------------------------~~~~~~~a~~ 56 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------------------------AIYYGNRSLA 56 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------------------------hHHHHHHHHH
Confidence 4678899999999999999999999999999999982 3788999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH--HHHHHHHhhc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRK--LKEMGNSILG 160 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~--~~~~~~~~~~ 160 (186)
+...|++++|+..+++++..+|.++.+++.+|.++..+|++++|+..|+++++++|.++.++..++.+ +.. .|
T Consensus 57 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~-----~~ 131 (166)
T 1a17_A 57 YLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-----QK 131 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH-----HH
T ss_pred HHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-----HH
Confidence 99999999999999999999999999999999999999999999999999999999999988666644 444 78
Q ss_pred cccccchhhhhc
Q 044796 161 RFGMSTDNFKAV 172 (186)
Q Consensus 161 ~~~~A~~~~~~~ 172 (186)
++++|+..++..
T Consensus 132 ~~~~A~~~~~~~ 143 (166)
T 1a17_A 132 AFERAIAGDEHK 143 (166)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHcccch
Confidence 888998888765
No 42
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.86 E-value=5.5e-21 Score=138.64 Aligned_cols=164 Identities=15% Similarity=0.137 Sum_probs=128.5
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHH------------------------
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEK------------------------ 59 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~------------------------ 59 (186)
.+..+..+|.++...|++++|+.+|+++++.+|+++.++..+|.++ ..++.+.+.
T Consensus 97 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (368)
T 1fch_A 97 HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGA 176 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC------
T ss_pred CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHh
Confidence 3556667777777777777777777777777777777666666554 222222211
Q ss_pred -------------------------HhhCCCcchhHH--HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHH
Q 044796 60 -------------------------KEVAPAPEMAEL--RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIR 112 (186)
Q Consensus 60 -------------------------~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 112 (186)
..+.......|. .+.++..+|.++...|++++|+..+++++..+|+++.++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 256 (368)
T 1fch_A 177 GGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNK 256 (368)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHH
Confidence 111111111222 45889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 113 RAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 113 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+|.++...|++++|+..|+++++++|+++.++..+|.++.. .|++++|+..|++++
T Consensus 257 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-----~g~~~~A~~~~~~al 312 (368)
T 1fch_A 257 LGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-----LGAHREAVEHFLEAL 312 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-----CCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 999999999999885
No 43
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.86 E-value=4.4e-21 Score=126.78 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=120.8
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
+.+..+..+|.++...|++++|+..+.+++...|.++.++..+|... ..++...+...+.......|..+.++..+|.+
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~ 116 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLV 116 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 35678999999999999999999999999999999999999998876 44454454444443333444456899999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 142 (186)
+..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|+++.
T Consensus 117 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 117 YDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 999999999999999999999999999999999999999999999999999999998643
No 44
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.85 E-value=3.9e-20 Score=117.57 Aligned_cols=117 Identities=13% Similarity=0.168 Sum_probs=107.5
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+..++.+|..++..|++++|+..|++++..+|.+ +.+|..+|.++
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---------------------------------~~~~~~lg~~~ 62 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD---------------------------------ARYFLGLGACR 62 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc---------------------------------HHHHHHHHHHH
Confidence 457789999999999999999999999999999993 38889999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
...|++++|+.+|++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++........+...
T Consensus 63 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 132 (142)
T 2xcb_A 63 QSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAM 132 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998877666655544
No 45
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.85 E-value=3.4e-20 Score=133.84 Aligned_cols=135 Identities=35% Similarity=0.515 Sum_probs=117.8
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..++.+|..++..|++++|+.+|++++.++|.+..... .. .....+....++.++|.++
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~-----------~~-------~~~~~~~~~~~~~nla~~~ 206 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSN-----------EE-------AQKAQALRLASHLNLAMCH 206 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCS-----------HH-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCCh-----------HH-------HHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999542100 00 0112233458999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGN 156 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 156 (186)
..+|++++|+.+|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++
T Consensus 207 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 279 (336)
T 1p5q_A 207 LKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279 (336)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998443
No 46
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.85 E-value=2.3e-20 Score=134.48 Aligned_cols=169 Identities=21% Similarity=0.181 Sum_probs=150.0
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.++.++.+|..++..|++++|+.+|+++++.+|+++.++..+|.+. ..++...+...+.......|..+.++..+|.++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999887 556666666555444444445569999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCc---ccHHHHHHH------------HHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNP---TYMKALIRR------------AEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p---~~~~~~~~l------------g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
...|++++|+..++++++.+| +++.++..+ |.++...|++++|+..++++++.+|.++.++..++
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRA 161 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 999999999999999999999 999888877 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccchhhhhcccCCCC
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
.++.. .|++++|+..+++++...+.
T Consensus 162 ~~~~~-----~~~~~~A~~~~~~~~~~~~~ 186 (359)
T 3ieg_A 162 ECFIK-----EGEPRKAISDLKAASKLKSD 186 (359)
T ss_dssp HHHHH-----TTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHH-----CCCHHHHHHHHHHHHHhCCC
Confidence 99999 99999999999988654444
No 47
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.84 E-value=9.6e-21 Score=135.20 Aligned_cols=162 Identities=12% Similarity=-0.027 Sum_probs=87.8
Q ss_pred HHHHHhHhHHHHcc-cHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 7 NEAKLEGNKLFAEG-KYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 7 ~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
..+..+|.++...| ++++|+.+|++++..+|.++.++..+|.+. ..++.+.+...+.......|.....+..+|.++.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 170 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG 170 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 44555555555555 555555556555555555555555555544 3333333333322222222222345555566666
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---------CCChHHHHHHHHHHHHHH
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFD---------PSNNQAKRTILRKLKEMG 155 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---------p~~~~~~~~l~~~~~~~~ 155 (186)
..|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++.. |..+.++..+|.++..
T Consensus 171 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-- 248 (330)
T 3hym_B 171 LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-- 248 (330)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH--
T ss_pred HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH--
Confidence 66666666666666666666666666666666666666666666666665554 4445555555555555
Q ss_pred HHhhccccccchhhhhcc
Q 044796 156 NSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 156 ~~~~~~~~~A~~~~~~~~ 173 (186)
.|++++|+..|++++
T Consensus 249 ---~g~~~~A~~~~~~a~ 263 (330)
T 3hym_B 249 ---LKKYAEALDYHRQAL 263 (330)
T ss_dssp ---TTCHHHHHHHHHHHH
T ss_pred ---hcCHHHHHHHHHHHH
Confidence 566666666665554
No 48
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.84 E-value=1.6e-20 Score=128.26 Aligned_cols=165 Identities=11% Similarity=0.081 Sum_probs=135.5
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCCh---hhhhccchhh-hhcCchhHHHhh----CCCcchhHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPE---RAESASAPEA-KEGQSASEKKEV----APAPEMAELRSICH 76 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~ 76 (186)
.++.++.+|..++..|++++|+..|+++++..|.++ .+++.+|.++ ..++.+.+...+ ...|... ..+.++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~-~~~~a~ 81 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP-NIDYVM 81 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT-THHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC-cHHHHH
Confidence 367899999999999999999999999999999875 5788888776 555555555443 3334322 123578
Q ss_pred HHHHHHHhh------------------hccHHHHHHHHHHHHhcCcccHHHH-----------------HHHHHHHHHhc
Q 044796 77 SNRGICFLK------------------LGKFEESIKECTKALELNPTYMKAL-----------------IRRAEAHEKLE 121 (186)
Q Consensus 77 ~~~a~~~~~------------------~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~lg~~~~~~g 121 (186)
+.+|.++.. .|++++|+..|+++++.+|+++.++ +.+|.++...|
T Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~ 161 (225)
T 2yhc_A 82 YMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG 161 (225)
T ss_dssp HHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888875 5799999999999999999987554 57899999999
Q ss_pred CHHHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 122 HFEEAIADMKKILEFDPSNN---QAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 122 ~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
++++|+..|+++++..|+++ .++..++.++.. +|++++|+..++++...
T Consensus 162 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~-----~g~~~~A~~~~~~l~~~ 213 (225)
T 2yhc_A 162 AWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQ-----MQMNAQAEKVAKIIAAN 213 (225)
T ss_dssp CHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHhh
Confidence 99999999999999999986 679999999998 99999999999987533
No 49
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.84 E-value=2.3e-19 Score=120.06 Aligned_cols=138 Identities=21% Similarity=0.336 Sum_probs=118.0
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.+.+..+..+|..++..|+|++|+.+|.+++.+.|.++..... .. ..........++..+|.+
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~--~~---------------~~~~~~~~~~~~~~la~~ 97 (198)
T 2fbn_A 35 VQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQ--IL---------------LDKKKNIEISCNLNLATC 97 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCH--HH---------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchh--hH---------------HHHHHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999999985532211 00 000111234789999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS 157 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 157 (186)
+..+|++++|+.++++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++.++..++.++..++..
T Consensus 98 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 98 YNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985443
No 50
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.84 E-value=4.6e-20 Score=124.92 Aligned_cols=167 Identities=14% Similarity=0.049 Sum_probs=142.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hh-cCchhHHHhhCCCcc--hhHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KE-GQSASEKKEVAPAPE--MAELRSICHSNRG 80 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~a 80 (186)
.+..+..+|.++...|++++|+.+|++++..+|.+..++..++.+. .. ++.+.+...+..... ..+....++..+|
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~ 120 (225)
T 2vq2_A 41 NELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKG 120 (225)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHH
Confidence 3567889999999999999999999999999999999999998877 44 555554443322211 2334468999999
Q ss_pred HHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHhh
Q 044796 81 ICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDP-SNNQAKRTILRKLKEMGNSIL 159 (186)
Q Consensus 81 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~~~ 159 (186)
.++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..++++++..| .++.++..++.++.. .
T Consensus 121 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 195 (225)
T 2vq2_A 121 ICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKA-----L 195 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-----T
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh-----c
Confidence 9999999999999999999999999999999999999999999999999999999999 999999888877777 8
Q ss_pred ccccccchhhhhcc--cCC
Q 044796 160 GRFGMSTDNFKAVK--DPN 176 (186)
Q Consensus 160 ~~~~~A~~~~~~~~--~~~ 176 (186)
|+++.|..+++.+. +|+
T Consensus 196 ~~~~~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 196 GNAQAAYEYEAQLQANFPY 214 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTT
T ss_pred CcHHHHHHHHHHHHHhCCC
Confidence 88888988888774 554
No 51
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.84 E-value=5.3e-19 Score=109.79 Aligned_cols=118 Identities=30% Similarity=0.454 Sum_probs=111.9
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
...+..++.+|..++..|++++|+.+|++++..+|.+ +.++..+|.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------~~~~~~~a~~ 55 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------------------------AVYFCNRAAA 55 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------------------------HHHHHHHHHH
Confidence 3567889999999999999999999999999999982 3788999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
+...|++++|+..+++++..+|+++.+++.+|.++...|++++|+..|+++++++|+++.++..++.++..
T Consensus 56 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 56 YSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888
No 52
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.84 E-value=9.7e-20 Score=113.61 Aligned_cols=131 Identities=26% Similarity=0.382 Sum_probs=121.9
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhh
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKL 86 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 86 (186)
+.++.+|..+...|++++|+..|+++++..|.+ +..+..+|.++...
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------~~~~~~~a~~~~~~ 48 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------------------------AEAWYNLGNAYYKQ 48 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------------------------hhHHHHHHHHHHHh
Confidence 568899999999999999999999999998882 27788899999999
Q ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccc
Q 044796 87 GKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMST 166 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~ 166 (186)
|++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++...|.++.++..++.++.. .|++++|+
T Consensus 49 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~~A~ 123 (136)
T 2fo7_A 49 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-----QGDYDEAI 123 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-----TTCHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-----HccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988888 99999999
Q ss_pred hhhhhcccC
Q 044796 167 DNFKAVKDP 175 (186)
Q Consensus 167 ~~~~~~~~~ 175 (186)
..|+.++..
T Consensus 124 ~~~~~~~~~ 132 (136)
T 2fo7_A 124 EYYQKALEL 132 (136)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcc
Confidence 999988643
No 53
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.84 E-value=1.8e-19 Score=112.43 Aligned_cols=118 Identities=29% Similarity=0.501 Sum_probs=111.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..++.+|..++..|++++|+.+|+++++.+|.+ ..++..+|.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------------------------~~~~~~la~~~ 60 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------------------------AKLYSNRAACY 60 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------------------------HHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------------------------HHHHHHHHHHH
Confidence 467889999999999999999999999999999982 37899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEM 154 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 154 (186)
...|++++|+..+++++..+|+++.+++.+|.++...|++++|+..|+++++.+|.+..++..++.++...
T Consensus 61 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 61 TKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988773
No 54
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.84 E-value=2e-21 Score=151.92 Aligned_cols=157 Identities=13% Similarity=0.032 Sum_probs=135.1
Q ss_pred HHcccHHHHHHHHHHHH--------hccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhc
Q 044796 17 FAEGKYEEALLQYEVAL--------RVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLG 87 (186)
Q Consensus 17 ~~~~~~~~A~~~~~~al--------~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 87 (186)
...|++++|+..|++++ +.+|++..++..+|..+ ..++.+.+...+.......|.++.+|+.+|.++..+|
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 481 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG 481 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC
Confidence 67889999999999999 88899999988888776 5566666666655555555556689999999999999
Q ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccch
Q 044796 88 KFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTD 167 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~ 167 (186)
++++|+..|+++++++|+++.+++.+|.++..+|++++ +..|+++++++|++..++.++|.++.. +|++++|+.
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~-----~g~~~~A~~ 555 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSA-----EGDRVGAVR 555 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHH-----cCCHHHHHH
Confidence 99999999999999999999999999999999999999 999999999999999999999999988 999999999
Q ss_pred hhhhcccCCCCc
Q 044796 168 NFKAVKDPNTGA 179 (186)
Q Consensus 168 ~~~~~~~~~~~~ 179 (186)
.|++++..++..
T Consensus 556 ~~~~al~l~P~~ 567 (681)
T 2pzi_A 556 TLDEVPPTSRHF 567 (681)
T ss_dssp HHHTSCTTSTTH
T ss_pred HHHhhcccCccc
Confidence 999987555543
No 55
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.84 E-value=3.6e-20 Score=132.05 Aligned_cols=97 Identities=10% Similarity=0.230 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
.+.++..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..|+++++.+|+++.++..++.++
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 250 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSY 250 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhhhcc
Q 044796 152 KEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.. .|++++|+..|++++
T Consensus 251 ~~-----~g~~~~A~~~~~~a~ 267 (327)
T 3cv0_A 251 SN-----MSQYDLAAKQLVRAI 267 (327)
T ss_dssp HH-----TTCHHHHHHHHHHHH
T ss_pred HH-----hccHHHHHHHHHHHH
Confidence 88 999999999999885
No 56
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.83 E-value=5.5e-21 Score=122.43 Aligned_cols=97 Identities=8% Similarity=0.026 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
+...++.+|.++...|++++|+..|++++..+|+++.+|+.+|.++..+|++++|+..|++++.++|+++.+++.+|.++
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 99 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECL 99 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 44889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhhhcc
Q 044796 152 KEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.. .|++++|+..|++++
T Consensus 100 ~~-----~g~~~~A~~~~~~al 116 (148)
T 2vgx_A 100 LQ-----XGELAEAESGLFLAQ 116 (148)
T ss_dssp HH-----TTCHHHHHHHHHHHH
T ss_pred HH-----cCCHHHHHHHHHHHH
Confidence 99 999999999999885
No 57
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.83 E-value=6.6e-20 Score=132.94 Aligned_cols=166 Identities=11% Similarity=0.072 Sum_probs=137.2
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
+..++.+|..++..|++++|+.+|+++++.+|.++.++..+|.+. ..++.+.+...+.......|..+.++..+|.++.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 455889999999999999999999999999999999999999887 5566555555444333333445588888888888
Q ss_pred hhccHHHHHHHHHHHHhcC-------------------------------------------------cc--cHHHHHHH
Q 044796 85 KLGKFEESIKECTKALELN-------------------------------------------------PT--YMKALIRR 113 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~-------------------------------------------------p~--~~~~~~~l 113 (186)
..|++++|+..+++++..+ |+ ++.++..+
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l 223 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGL 223 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHH
Confidence 8888777777777666554 44 67888999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCC
Q 044796 114 AEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPN 176 (186)
Q Consensus 114 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 176 (186)
|.++...|++++|+..|++++.++|+++.++..+|.++.. .|++++|+..|++++...
T Consensus 224 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-----~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 224 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-----GNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999988 999999999999886433
No 58
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.83 E-value=8.2e-20 Score=135.81 Aligned_cols=165 Identities=22% Similarity=0.195 Sum_probs=120.8
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
..+..++.+|..++..|++++|+.+|+++++.+|.++.++..+|.+. ..++...+...+.......|..+.++..+|.+
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 103 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHL 103 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 45677888888888888888888888888888888888888877766 44555555544443333334445777788888
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccH---HHHHHH------------HHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYM---KALIRR------------AEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l------------g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
+...|++++|+..|++++..+|+++ .++..+ |.++...|++++|+..|+++++.+|.++.++..+
T Consensus 104 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 183 (450)
T 2y4t_A 104 LLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELR 183 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 8888888888888888888887776 655444 5557777888888888888888888777777777
Q ss_pred HHHHHHHHHHhhccccccchhhhhcc
Q 044796 148 LRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 148 ~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+.++.. .|++++|+..|++++
T Consensus 184 ~~~~~~-----~g~~~~A~~~~~~~~ 204 (450)
T 2y4t_A 184 AECFIK-----EGEPRKAISDLKAAS 204 (450)
T ss_dssp HHHHHH-----TTCGGGGHHHHHHHH
T ss_pred HHHHHH-----CCCHHHHHHHHHHHH
Confidence 777777 777777777777664
No 59
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.83 E-value=7.1e-19 Score=107.36 Aligned_cols=115 Identities=29% Similarity=0.429 Sum_probs=108.3
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+..++.+|..++..|++++|+.+|++++..+|.+ +.++..+|.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------~~~~~~~a~~~ 48 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------------------------HVLYSNRSAAY 48 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------------------------HHHHHHHHHHH
Confidence 467899999999999999999999999999999982 37889999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
...|++++|+..+++++..+|+++.++..+|.++...|++++|...++++++.+|+++.++..++.+.
T Consensus 49 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 49 AKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999998888654
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.83 E-value=1.7e-19 Score=121.70 Aligned_cols=134 Identities=18% Similarity=0.142 Sum_probs=117.4
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
+..+..++.+|..++..|++++|+.+|++++ +|. +.++..+|.+
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~----------------------------------~~~~~~lg~~ 46 (213)
T 1hh8_A 3 LVEAISLWNEGVLAADKKDWKGALDAFSAVQ--DPH----------------------------------SRICFNIGCM 46 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCC----------------------------------HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCC----------------------------------hHHHHHHHHH
Confidence 3567788999999999999999999999985 332 2688899999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh----------------HHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN----------------QAKRT 146 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~----------------~~~~~ 146 (186)
+...|++++|+..+++++..+|+++.+++.+|.++..+|++++|+..|++++++.|.+. .++..
T Consensus 47 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (213)
T 1hh8_A 47 YTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYN 126 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888776 88999
Q ss_pred HHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 147 ILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 147 l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
+|.++.. .|++++|+..|++++...+
T Consensus 127 l~~~~~~-----~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 127 IAFMYAK-----KEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp HHHHHHH-----TTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHH-----ccCHHHHHHHHHHHHHcCc
Confidence 9988888 8999999999988864443
No 61
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.83 E-value=6.1e-20 Score=125.28 Aligned_cols=146 Identities=15% Similarity=0.104 Sum_probs=125.5
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhh----CCCcchh---HHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEV----APAPEMA---ELRSICHS 77 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~---~~~~~~~~ 77 (186)
...++.+|.++...|++++|+.+|+++++.+|+++.++..+|.++ ..++.+.+...+ ...|... .....++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 42 SVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 467788999999999999999999999999999999999999887 556655555443 3333322 11236799
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHhcCcc--cHHHHHHHHHHHHHhcCH---------------------------HHHHH
Q 044796 78 NRGICFLKLGKFEESIKECTKALELNPT--YMKALIRRAEAHEKLEHF---------------------------EEAIA 128 (186)
Q Consensus 78 ~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~g~~---------------------------~~A~~ 128 (186)
.+|.++...|++++|+..|+++++++|+ ++.+++.+|.++...|+. ++|+.
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~ 201 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVD 201 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999 99999
Q ss_pred HHHHHHhcCCCChHHHHHHHHHH
Q 044796 129 DMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 129 ~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
+|+++++++|+++.+...++.+.
T Consensus 202 ~~~~a~~l~p~~~~~~~~l~~i~ 224 (228)
T 4i17_A 202 YLGEAVTLSPNRTEIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCHHHHHHHHHHH
Confidence 99999999999999988887654
No 62
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.83 E-value=1.5e-19 Score=111.84 Aligned_cols=101 Identities=19% Similarity=0.173 Sum_probs=70.9
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhc
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLG 87 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 87 (186)
.++.+|..++..|++++|+..|+++++.+|+ ++.+|+.+|.++...|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~---------------------------------~~~a~~~lg~~~~~~g 65 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE---------------------------------REEAWRSLGLTQAENE 65 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------------------------CHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---------------------------------CHHHHHHHHHHHHHcC
Confidence 4566777777777777777777777777777 2266777777777777
Q ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 044796 88 KFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN 141 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 141 (186)
++++|+..++++++++|+++.+++.+|.++...|++++|+..|+++++++|++.
T Consensus 66 ~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 66 KDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 777777777777777777777777777777777777777777777777777654
No 63
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.82 E-value=5.2e-20 Score=138.53 Aligned_cols=130 Identities=25% Similarity=0.422 Sum_probs=117.6
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.+.+..+..+|..++..|++++|+.+|+++++++|++ +.++..+|.+
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------------------------~~~~~~lg~~ 49 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------------------------AIYYGNRSLA 49 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------------------------HHHHHHHHHH
Confidence 4667888899999999999999999999999999992 3889999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH--HHHHHHHhhc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRK--LKEMGNSILG 160 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~--~~~~~~~~~~ 160 (186)
+..+|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++..++.+ +.. .+
T Consensus 50 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~-----~g 124 (477)
T 1wao_1 50 YLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-----QK 124 (477)
T ss_dssp HHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH-----HH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-----HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999977 666 79
Q ss_pred cccccchhhh
Q 044796 161 RFGMSTDNFK 170 (186)
Q Consensus 161 ~~~~A~~~~~ 170 (186)
++++|++.++
T Consensus 125 ~~~~A~~~~~ 134 (477)
T 1wao_1 125 AFERAIAGDE 134 (477)
T ss_dssp HHCCC-----
T ss_pred HHHHHhcccc
Confidence 9999999998
No 64
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=6e-20 Score=139.26 Aligned_cols=163 Identities=17% Similarity=0.122 Sum_probs=145.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|.++...|++++|+.+|+++++.+|+ +.++..+|.+. ..++...+...+.......|..+.++..+|.++
T Consensus 242 ~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 320 (537)
T 3fp2_A 242 AALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMY 320 (537)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 3567899999999999999999999999999999 88888888877 556666666555444444445568999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcccc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFG 163 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (186)
...|++++|+..+++++..+|+++.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++.. .|+++
T Consensus 321 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~g~~~ 395 (537)
T 3fp2_A 321 FILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTD-----RGDFD 395 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-----TTCHH
T ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-----hCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred ccchhhhhcc
Q 044796 164 MSTDNFKAVK 173 (186)
Q Consensus 164 ~A~~~~~~~~ 173 (186)
+|+..|++++
T Consensus 396 ~A~~~~~~a~ 405 (537)
T 3fp2_A 396 TAIKQYDIAK 405 (537)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999885
No 65
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.82 E-value=3e-19 Score=133.78 Aligned_cols=136 Identities=29% Similarity=0.436 Sum_probs=114.6
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+..++.+|..++..|+|++|+.+|+++++++|.+..... .. .....+....+|.++|.++
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~------------~~------~~~~~~~~~~~~~nla~~~ 327 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSE------------KE------SKASESFLLAAFLNLAMCY 327 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCH------------HH------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCh------------HH------HHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999998543100 00 0012233458999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS 157 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 157 (186)
..+|++++|+.+|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++..++.++..+++.
T Consensus 328 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 328 LKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985543
No 66
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.82 E-value=3e-19 Score=124.50 Aligned_cols=170 Identities=15% Similarity=0.050 Sum_probs=133.2
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
..+..++.+|.++...|++++|+.+|+++++.+|.++.++..+|.++ ..++.+.+...+.......|..+.++..+|.+
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~ 120 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 120 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHH
Confidence 46788999999999999999999999999999999999999988877 55555555554443333333445889999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----------------------
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN---------------------- 140 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------------- 140 (186)
+...|++++|+..++++++.+|+++......+.+ ...|++++|+..+.+++...|.+
T Consensus 121 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 199 (275)
T 1xnf_A 121 LYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER 199 (275)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHH
Confidence 9999999999999999999999988766666654 56688888888888887776654
Q ss_pred ---------------hHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCCCc
Q 044796 141 ---------------NQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNTGA 179 (186)
Q Consensus 141 ---------------~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 179 (186)
+.++..+|.++.. .|++++|+..|++++..+|..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 200 LKADATDNTSLAEHLSETNFYLGKYYLS-----LGDLDSATALFKLAVANNVHN 248 (275)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHTTCCTT
T ss_pred HHHHhcccccccccccHHHHHHHHHHHH-----cCCHHHHHHHHHHHHhCCchh
Confidence 3445555655555 899999999999887555543
No 67
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.82 E-value=1.2e-19 Score=135.02 Aligned_cols=167 Identities=14% Similarity=0.203 Sum_probs=117.6
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHH------
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSN------ 78 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 78 (186)
+..+..+|.++...|++++|+.+|+++++.+|.++.++..+|.++ ..++.+.+...+.......|.....+..
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~ 256 (450)
T 2y4t_A 177 AELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKK 256 (450)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 445666777777777777777777777777777777777776665 3344444443332222222222233333
Q ss_pred ------HHHHHhhhccHHHHHHHHHHHHhcCcccHH----HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 79 ------RGICFLKLGKFEESIKECTKALELNPTYMK----ALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 79 ------~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
+|.++...|++++|+..|++++..+|+++. ++..+|.++...|++++|+..++++++++|+++.++..++
T Consensus 257 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~ 336 (450)
T 2y4t_A 257 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRA 336 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 378888888888888888888888887743 6778888888888888888888888888888888888888
Q ss_pred HHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
.++.. .|++++|+..|++++..+|
T Consensus 337 ~~~~~-----~~~~~~A~~~~~~al~~~p 360 (450)
T 2y4t_A 337 EAYLI-----EEMYDEAIQDYETAQEHNE 360 (450)
T ss_dssp HHHHH-----TTCHHHHHHHHHHHHTTSS
T ss_pred HHHHH-----hcCHHHHHHHHHHHHHhCc
Confidence 88887 8888888888888854433
No 68
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.82 E-value=8.9e-20 Score=127.19 Aligned_cols=162 Identities=14% Similarity=0.095 Sum_probs=85.6
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK 85 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 85 (186)
..+..+|.++...|++++|+.+|+++++.+|.++.++..+|.+. ..++.+.+...+.......|..+.++..+|.....
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 34555555666666666666666666666666555555555554 33444444443333322233334555555522223
Q ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcC---CCC-----hHHHHHHHHHHHHH
Q 044796 86 LGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEH---FEEAIADMKKILEFD---PSN-----NQAKRTILRKLKEM 154 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~---p~~-----~~~~~~l~~~~~~~ 154 (186)
.+++++|+..++++++.+|+++.+++.+|.++..+|+ +++|+..|++++++. |+. ..++..+|.++..
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 233 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTI- 233 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH-
Confidence 3355666666666666666555555556666555555 555555565555554 221 1344444444444
Q ss_pred HHHhhccccccchhhhhcc
Q 044796 155 GNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 155 ~~~~~~~~~~A~~~~~~~~ 173 (186)
.|++++|+.+|++++
T Consensus 234 ----~~~~~~A~~~~~~al 248 (272)
T 3u4t_A 234 ----NRDKVKADAAWKNIL 248 (272)
T ss_dssp ----TTCHHHHHHHHHHHH
T ss_pred ----cCCHHHHHHHHHHHH
Confidence 666666666666664
No 69
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.81 E-value=2.3e-19 Score=137.76 Aligned_cols=164 Identities=13% Similarity=0.113 Sum_probs=114.2
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
...+..+|..+...|++++|+..|+++++..|++..++..++..+ ..++.+.+...+.......+.++.+|..+|.++.
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 345566666666666666666666666666666666666666554 3444444444333322222334477778888888
Q ss_pred hhccHHHHHHHHHHHHhc------Cccc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 044796 85 KLGKFEESIKECTKALEL------NPTY-MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS 157 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~------~p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 157 (186)
..|++++|+..|+++++. +|+. ..++..+|.++...|++++|+..|+++++.+|+++.++..++.++..
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~---- 562 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLH---- 562 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH----
T ss_pred HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----
Confidence 888888888888888877 5554 67788888888888888888888888888888888888888887777
Q ss_pred hhccccccchhhhhccc
Q 044796 158 ILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 158 ~~~~~~~A~~~~~~~~~ 174 (186)
.|++++|++.|++++.
T Consensus 563 -~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 563 -KKIPGLAITHLHESLA 578 (597)
T ss_dssp -TTCHHHHHHHHHHHHH
T ss_pred -hCCHHHHHHHHHHHHh
Confidence 8888888888887753
No 70
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.81 E-value=1.4e-18 Score=109.21 Aligned_cols=117 Identities=27% Similarity=0.478 Sum_probs=108.0
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..++.+|..++..|++++|+.+|.+++..+|. ++.++..+|.++
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~---------------------------------~~~~~~~l~~~~ 53 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---------------------------------VAVYYTNRALCY 53 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------------------------CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC---------------------------------cHHHHHHHHHHH
Confidence 35788999999999999999999999999999999 238899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----ChHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS-----NNQAKRTILRKLKE 153 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~l~~~~~~ 153 (186)
...|++++|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+ +..+...+..+...
T Consensus 54 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 54 LKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 77777777766554
No 71
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.81 E-value=5.3e-21 Score=149.57 Aligned_cols=167 Identities=13% Similarity=-0.022 Sum_probs=139.7
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.++.++.+|.++...|++++|+..|+++++.+|++..++..+|.++ ..++.+.+...+.......|.++.++.++|.++
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~ 511 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATA 511 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999887 556666666555444444444559999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH---Hhhc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGN---SILG 160 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~---~~~~ 160 (186)
..+|++++ +..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++.+++.++...+. ...+
T Consensus 512 ~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~~~~~~~ 590 (681)
T 2pzi_A 512 ELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRSTSEVTEE 590 (681)
T ss_dssp HHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-------CCHH
T ss_pred HHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCCCCCCHH
Confidence 99999999 9999999999999999999999999999999999999999999999999999999988765332 1124
Q ss_pred cccccchhhhhc
Q 044796 161 RFGMSTDNFKAV 172 (186)
Q Consensus 161 ~~~~A~~~~~~~ 172 (186)
++++|.+.+...
T Consensus 591 ~~~~A~~~l~~~ 602 (681)
T 2pzi_A 591 QIRDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhhC
Confidence 455555555443
No 72
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.81 E-value=2e-19 Score=127.39 Aligned_cols=158 Identities=11% Similarity=0.070 Sum_probs=97.6
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHH--HH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRG--IC 82 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~ 82 (186)
+..++.+|.++...|++++|+.+|++ |.++.++..++.++ ..+..+.+...+.......|.........+ .+
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l 175 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSL 175 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH
Confidence 44555566666666666666666655 55555555555554 334444333332222111111111111111 22
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRF 162 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
+...|++++|+..|+++++.+|+++.+++.+|.++..+|++++|...|+++++++|+++.++.+++.++.. .|++
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-----~g~~ 250 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-----LGKP 250 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCC
T ss_pred HhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----cCCC
Confidence 23346777777777777777777778888888888888888888888888888888888888888877777 7777
Q ss_pred cc-cchhhhhcc
Q 044796 163 GM-STDNFKAVK 173 (186)
Q Consensus 163 ~~-A~~~~~~~~ 173 (186)
.+ +.+++++++
T Consensus 251 ~eaa~~~~~~~~ 262 (291)
T 3mkr_A 251 PEVTNRYLSQLK 262 (291)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 65 456777664
No 73
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.81 E-value=1.6e-20 Score=147.10 Aligned_cols=139 Identities=14% Similarity=0.218 Sum_probs=121.5
Q ss_pred ccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHH
Q 044796 35 VASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRR 113 (186)
Q Consensus 35 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 113 (186)
..|++++++..+|.++ ..++.+++...+.......|..+.++.++|.++..+|++++|+..|+++++++|+++.+++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4688899999999887 556666666555444444445569999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCCC
Q 044796 114 AEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 114 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
|.++..+|++++|+..|+++++++|++..++.++|.++.. +|++++|+..|++++..+|+
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-----~g~~~eAi~~~~~Al~l~P~ 143 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-----SGNIPEAIASYRTALKLKPD 143 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999 99999999999999644443
No 74
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.81 E-value=7e-19 Score=135.00 Aligned_cols=134 Identities=11% Similarity=0.052 Sum_probs=114.0
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK 85 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 85 (186)
+..+..+|.++...|++++|+.+|+++++++|+ ++.++..+|.++..
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------------------------------~~~~~~~lg~~~~~ 69 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPG---------------------------------HPEAVARLGRVRWT 69 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT---------------------------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------------------------CHHHHHHHHHHHHH
Confidence 455666666666666666666666666666666 34889999999999
Q ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhh---ccc
Q 044796 86 LGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSIL---GRF 162 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~---~~~ 162 (186)
+|++++|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+++.++..++.++.. . |++
T Consensus 70 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-----~~~~g~~ 144 (568)
T 2vsy_A 70 QQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR-----LCDWRAL 144 (568)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCCTTH
T ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----hhccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 7 899
Q ss_pred cccchhhhhcccCCC
Q 044796 163 GMSTDNFKAVKDPNT 177 (186)
Q Consensus 163 ~~A~~~~~~~~~~~~ 177 (186)
++|+..|++++..++
T Consensus 145 ~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 145 DVLSAQVRAAVAQGV 159 (568)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999998864433
No 75
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.81 E-value=1.2e-19 Score=113.27 Aligned_cols=104 Identities=18% Similarity=0.248 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRK 150 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 150 (186)
..+.++.++|..++..|+|++|+.+|+++++++|+++.++.++|.++..+|++++|+..|+++++++|+++..+..++.+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999887766666666
Q ss_pred HHHHHHH--hhccccccchhhhhccc
Q 044796 151 LKEMGNS--ILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 151 ~~~~~~~--~~~~~~~A~~~~~~~~~ 174 (186)
+..+|.. .++++++|+++|++++.
T Consensus 86 ~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 86 MSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 6666654 38999999999999863
No 76
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.81 E-value=1.2e-19 Score=131.03 Aligned_cols=154 Identities=25% Similarity=0.424 Sum_probs=98.0
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.+.+..++.+|..++..|+|++|+.+|++++.+.|.+... ...+ ........ ....++.++|.+
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~-~~~~------~~~~~~~~---------l~~~~~~nla~~ 239 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMF-QLYG------KYQDMALA---------VKNPCHLNIAAC 239 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHH-TCCH------HHHHHHHH---------HHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhh-hhcc------cHHHHHHH---------HHHHHHHHHHHH
Confidence 4678899999999999999999999999999999985421 0000 00111111 112589999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccc
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRF 162 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
+..+|++++|+.+|+++++++|+++.+++++|.++..+|++++|+..|+++++++|+++.++..++.+... ..+..
T Consensus 240 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~----~~~~~ 315 (338)
T 2if4_A 240 LIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ----EKALY 315 (338)
T ss_dssp HHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------------
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998876332 25667
Q ss_pred cccchhhhhcccCC
Q 044796 163 GMSTDNFKAVKDPN 176 (186)
Q Consensus 163 ~~A~~~~~~~~~~~ 176 (186)
+.+...|++++...
T Consensus 316 ~~a~~~~~~~l~~~ 329 (338)
T 2if4_A 316 QKQKEMYKGIFKGK 329 (338)
T ss_dssp --------------
T ss_pred HHHHHHHHHhhCCC
Confidence 78888888875443
No 77
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.81 E-value=1.3e-19 Score=129.22 Aligned_cols=160 Identities=16% Similarity=0.124 Sum_probs=109.0
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHh----hCCCcchhHHHHHHHHHH--
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKE----VAPAPEMAELRSICHSNR-- 79 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-- 79 (186)
..+..+|.++...|++++|+.+|+++++.+|.++.++..+|.+. ..++.+.+... +...|... ..+..+
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~ 131 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE----QLGSVNLQ 131 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTT----TC------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH----HHHHHHhH
Confidence 44555555555555555555555555555555555555555444 22333222222 22222111 222222
Q ss_pred ------------HH-HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHH
Q 044796 80 ------------GI-CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRT 146 (186)
Q Consensus 80 ------------a~-~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 146 (186)
+. ++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..++++++.+|+++.++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 211 (327)
T 3cv0_A 132 ADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNK 211 (327)
T ss_dssp --------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 33 46667777777777888888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 147 ILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 147 l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
++.++.. .|++++|+..|++++..
T Consensus 212 l~~~~~~-----~~~~~~A~~~~~~a~~~ 235 (327)
T 3cv0_A 212 LGATLAN-----GNRPQEALDAYNRALDI 235 (327)
T ss_dssp HHHHHHH-----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-----cCCHHHHHHHHHHHHHc
Confidence 9999988 99999999999988643
No 78
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.80 E-value=2.2e-18 Score=125.79 Aligned_cols=137 Identities=27% Similarity=0.503 Sum_probs=116.6
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
++.+..+..+|..++..|++++|+.+|++++++.|..+.. .. ... .....+....++.++|.+
T Consensus 220 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~----------~~---~~~----~~~~~~~~~~~~~nla~~ 282 (370)
T 1ihg_A 220 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAA----------AE---DAD----GAKLQPVALSCVLNIGAC 282 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH----------SC---HHH----HGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccc----------cC---hHH----HHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999976553200 00 000 111334466899999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGN 156 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 156 (186)
+..+|++++|+.+++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..++.
T Consensus 283 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 283 KLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888443
No 79
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.80 E-value=7.8e-18 Score=103.61 Aligned_cols=116 Identities=31% Similarity=0.441 Sum_probs=109.2
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.+..++.+|.++...|++++|+..|++++...|.+ +.++..+|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------~~~~~~la~~~~ 54 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------------------------AEAWYNLGNAYY 54 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------------------------HHHHHHHHHHHH
Confidence 36789999999999999999999999999999882 378889999999
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
..|++++|+..+++++..+|.++.++..+|.++...|++++|+..|+++++.+|+++.++..++.++..
T Consensus 55 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 55 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999988766
No 80
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.80 E-value=2e-19 Score=126.79 Aligned_cols=142 Identities=23% Similarity=0.375 Sum_probs=119.4
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.+..++.+|..++..|++++|+.+|++++..+|+ ++.++.++|.++.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------------------------------~~~~~~~la~~~~ 49 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---------------------------------VAVYYTNRALCYL 49 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC---------------------------------CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc---------------------------------cHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998 3388999999999
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh-----HHHHHHHH----------
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN-----QAKRTILR---------- 149 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~---------- 149 (186)
.+|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+++ .++..+..
T Consensus 50 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 2c2l_A 50 KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIE 129 (281)
T ss_dssp HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998763 22222211
Q ss_pred ---------HHHHHHHHhhccccccchhhhhcccCCCCc
Q 044796 150 ---------KLKEMGNSILGRFGMSTDNFKAVKDPNTGA 179 (186)
Q Consensus 150 ---------~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 179 (186)
+...++....|++++|++.++.++..+++.
T Consensus 130 ~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 130 ERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccch
Confidence 111223335678889999998887665554
No 81
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=8.4e-18 Score=106.76 Aligned_cols=118 Identities=31% Similarity=0.547 Sum_probs=108.3
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..++.+|..++..|++++|+.+|+++++.+|++. ....++..+|.++
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~------------------------------~~~~~~~~~a~~~ 75 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQ------------------------------DQAVLHRNRAACH 75 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHH------------------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccch------------------------------HHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999821 1248899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
...|++++|+..+++++..+|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+.
T Consensus 76 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 76 LKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988877643
No 82
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.80 E-value=1.8e-18 Score=122.51 Aligned_cols=169 Identities=9% Similarity=-0.073 Sum_probs=128.0
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCC------hhhhhccchhh-hhcCchhHHHhhC----CCcch--hH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVP------ERAESASAPEA-KEGQSASEKKEVA----PAPEM--AE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~--~~ 70 (186)
+....+...|.++...|++++|+.+|.+++.+.+.. ..++..+|.++ ..++.+.+...+. ..+.. ..
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~ 114 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 345667777888888888888888888888875432 34566677666 3345544443322 22211 11
Q ss_pred HHHHHHHHHHHHHhhh-ccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChH-
Q 044796 71 LRSICHSNRGICFLKL-GKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQ- 142 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~- 142 (186)
..+.++..+|.++... |++++|+.+|++++++.|.. ..++..+|.++..+|++++|+.+|++++++.|+++.
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 2357889999999996 99999999999999998754 567899999999999999999999999999998764
Q ss_pred ------HHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 143 ------AKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 143 ------~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
++..+|.++.. +|++++|+.+|++++..+|
T Consensus 195 ~~~~~~~~~~lg~~~~~-----~g~~~~A~~~~~~al~l~p 230 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLA-----ATDAVAAARTLQEGQSEDP 230 (292)
T ss_dssp GGGHHHHHHHHHHHHHH-----TTCHHHHHHHHHGGGCC--
T ss_pred cHHHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHhhCC
Confidence 46777777777 8999999999999965444
No 83
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.80 E-value=9.4e-19 Score=134.40 Aligned_cols=164 Identities=12% Similarity=0.125 Sum_probs=117.7
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|..+...|++++|+..|+++++.+|.+..++..++.+. ..++...+...+.......+.....+..+|.++
T Consensus 304 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 383 (597)
T 2xpi_A 304 SSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYY 383 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHH
Confidence 4567888899999999999999999999998888888777776665 444444444443332233333446777777777
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcccc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFG 163 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (186)
...|++++|+..|+++++.+|.++.+|..+|.++...|++++|+..|+++++..|++..++..++.++.. .|+++
T Consensus 384 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~g~~~ 458 (597)
T 2xpi_A 384 LCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-----LGNIL 458 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-----HTCHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-----cCCHH
Confidence 7777777777777777777777777777777777777777777777777777777777777777766666 66667
Q ss_pred ccchhhhhcc
Q 044796 164 MSTDNFKAVK 173 (186)
Q Consensus 164 ~A~~~~~~~~ 173 (186)
+|++.|++++
T Consensus 459 ~A~~~~~~~~ 468 (597)
T 2xpi_A 459 LANEYLQSSY 468 (597)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776664
No 84
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.4e-19 Score=136.39 Aligned_cols=168 Identities=17% Similarity=0.129 Sum_probs=141.8
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|.++...|++++|+.+|+++++.+|.++.++..+|.+. ..++.+.+...+.......|..+.++..+|.++
T Consensus 303 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 382 (514)
T 2gw1_A 303 NSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEIL 382 (514)
T ss_dssp CTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHH
Confidence 3467888999999999999999999999999999998888888776 445555555444333333334458899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHH------HHHHHHHHHHH---hcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMK------ALIRRAEAHEK---LEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEM 154 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~------~~~~lg~~~~~---~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 154 (186)
...|++++|+..+++++..+|+++. ++..+|.++.. .|++++|+..|++++..+|+++.++..++.++..
T Consensus 383 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~- 461 (514)
T 2gw1_A 383 TDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQ- 461 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 9999999999999999999988855 99999999999 9999999999999999999999999999999998
Q ss_pred HHHhhccccccchhhhhcccCCC
Q 044796 155 GNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 155 ~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
.|++++|+..|++++..++
T Consensus 462 ----~g~~~~A~~~~~~a~~~~~ 480 (514)
T 2gw1_A 462 ----QEDIDEAITLFEESADLAR 480 (514)
T ss_dssp ----TTCHHHHHHHHHHHHHHCS
T ss_pred ----hcCHHHHHHHHHHHHHhcc
Confidence 9999999999998864433
No 85
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.79 E-value=8.7e-18 Score=104.52 Aligned_cols=114 Identities=15% Similarity=0.104 Sum_probs=102.7
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK 85 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 85 (186)
++.++.+|..++..|++++|+..|+++++.+|+++ . .+.+++.+|.++..
T Consensus 2 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~--------------------------~----~~~~~~~lg~~~~~ 51 (129)
T 2xev_A 2 ARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGV--------------------------Y----TPNALYWLGESYYA 51 (129)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST--------------------------T----HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc--------------------------c----cHHHHHHHHHHHHH
Confidence 34678899999999999999999999999999832 1 22788999999999
Q ss_pred hccHHHHHHHHHHHHhcCccc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 86 LGKFEESIKECTKALELNPTY---MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
.|++++|+..+++++..+|++ +.+++.+|.++..+|++++|+..|++++...|+++.+......
T Consensus 52 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 52 TRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 999999999999999999999 8999999999999999999999999999999999887766554
No 86
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.79 E-value=1.4e-17 Score=103.38 Aligned_cols=118 Identities=20% Similarity=0.282 Sum_probs=108.6
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+..++.+|..++..|++++|+.+|++++..+|.+ +.++..+|.++
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------------------------~~~~~~la~~~ 48 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------------------------MTYITNQAAVY 48 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------------------------HHHHHHHHHHH
Confidence 467889999999999999999999999999999982 37889999999
Q ss_pred hhhccHHHHHHHHHHHHhcCccc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTY-------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMG 155 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 155 (186)
...|++++|+..+++++...|.+ +.+++.+|.++...|++++|+..|+++++..| ++..+..++.+...++
T Consensus 49 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 49 FEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 89999999999999999999999999999999 6888888888777633
No 87
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.79 E-value=3.3e-18 Score=121.10 Aligned_cols=163 Identities=10% Similarity=0.045 Sum_probs=139.4
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhc--cCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRV--ASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGI 81 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 81 (186)
....+..++..+...+++++|+..+++.+.. +|+++.++..+|.++ ..++.+.+...+.. + .++.++..+|.
T Consensus 64 ~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-~----~~~~~~~~l~~ 138 (291)
T 3mkr_A 64 ELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-G----DSLECMAMTVQ 138 (291)
T ss_dssp HHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-C----CSHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-C----CCHHHHHHHHH
Confidence 3456777888888999999999999999876 699999999999887 66888888888877 3 34589999999
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHH--HHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhh
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAE--AHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSIL 159 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~--~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 159 (186)
++..+|++++|+..++++++.+|++.......+. ++...|++++|+..|+++++.+|+++.++..+|.++.. .
T Consensus 139 ~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-----~ 213 (291)
T 3mkr_A 139 ILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-----Q 213 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-----T
T ss_pred HHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-----c
Confidence 9999999999999999999999998755444443 33455899999999999999999999999999999999 9
Q ss_pred ccccccchhhhhcccCCC
Q 044796 160 GRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 160 ~~~~~A~~~~~~~~~~~~ 177 (186)
|++++|+..|++++..+|
T Consensus 214 g~~~eA~~~l~~al~~~p 231 (291)
T 3mkr_A 214 GRWEAAEGVLQEALDKDS 231 (291)
T ss_dssp TCHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 999999999999864333
No 88
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.8e-19 Score=134.73 Aligned_cols=160 Identities=15% Similarity=0.084 Sum_probs=142.9
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHH----HhhCCCcchhHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEK----KEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 78 (186)
..+..+..+|.++...|++++|+.+|++++..+|. ..++..+|.+. ..++...+. ..+...|.. +.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~ 309 (514)
T 2gw1_A 235 KLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNN----SSVYYH 309 (514)
T ss_dssp HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTC----THHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCC----HHHHHH
Confidence 45778999999999999999999999999999999 88998888876 444444433 444544443 489999
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSI 158 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 158 (186)
+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..++++++.+|+++.++..+|.++..
T Consensus 310 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----- 384 (514)
T 2gw1_A 310 RGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTD----- 384 (514)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-----
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHH-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccchhhhhcc
Q 044796 159 LGRFGMSTDNFKAVK 173 (186)
Q Consensus 159 ~~~~~~A~~~~~~~~ 173 (186)
.|++++|+..|++++
T Consensus 385 ~~~~~~A~~~~~~a~ 399 (514)
T 2gw1_A 385 KNDFDKALKQYDLAI 399 (514)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999999885
No 89
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.79 E-value=2.9e-19 Score=117.42 Aligned_cols=126 Identities=15% Similarity=0.123 Sum_probs=104.8
Q ss_pred HhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHH
Q 044796 13 GNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEES 92 (186)
Q Consensus 13 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A 92 (186)
+..+...|++++|+..+++++..+|.+ +.++..+|.++...|++++|
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~~---------------------------------~~~~~~lg~~~~~~~~~~~A 63 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQN---------------------------------SEQWALLGEYYLWQNDYSNS 63 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCSC---------------------------------HHHHHHHHHHHHHTTCHHHH
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCCc---------------------------------HHHHHHHHHHHHHcCCHHHH
Confidence 344567899999999999999999993 37888889999999999999
Q ss_pred HHHHHHHHhcCcccHHHHHHHHHH-HHHhcCH--HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhh
Q 044796 93 IKECTKALELNPTYMKALIRRAEA-HEKLEHF--EEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNF 169 (186)
Q Consensus 93 ~~~~~~al~~~p~~~~~~~~lg~~-~~~~g~~--~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~ 169 (186)
+.+|++++..+|+++.++..+|.+ +...|++ ++|+..|++++..+|+++.++..+|.++.. .|++++|+..|
T Consensus 64 ~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-----~g~~~~A~~~~ 138 (177)
T 2e2e_A 64 LLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-----QANYAQAIELW 138 (177)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-----cccHHHHHHHH
Confidence 999999999999999999999998 7788888 999999999999999999999999988888 88899999999
Q ss_pred hhcccCC
Q 044796 170 KAVKDPN 176 (186)
Q Consensus 170 ~~~~~~~ 176 (186)
++++..+
T Consensus 139 ~~al~~~ 145 (177)
T 2e2e_A 139 QKVMDLN 145 (177)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 8885433
No 90
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.79 E-value=1e-18 Score=110.99 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRK 150 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 150 (186)
.....++.+|.++...|++++|+..|++++..+|+++.+|+.+|.++..+|++++|+..|++++.++|+++.++..+|.+
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 95 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAEC 95 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 35588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccchhhhhcc
Q 044796 151 LKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+.. .|++++|+..|++++
T Consensus 96 ~~~-----~g~~~~A~~~~~~al 113 (142)
T 2xcb_A 96 HLQ-----LGDLDGAESGFYSAR 113 (142)
T ss_dssp HHH-----TTCHHHHHHHHHHHH
T ss_pred HHH-----cCCHHHHHHHHHHHH
Confidence 999 999999999999885
No 91
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.78 E-value=1.2e-18 Score=121.49 Aligned_cols=166 Identities=19% Similarity=0.131 Sum_probs=136.2
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc--------CCChhhhhccchhh-hhcCchhHHHhhCCCcch------
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVA--------SVPERAESASAPEA-KEGQSASEKKEVAPAPEM------ 68 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------ 68 (186)
..+..+..+|.++...|++++|+.+|++++++. |....++..+|.+. ..++.+.+...+......
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 120 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 120 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC
Confidence 457889999999999999999999999999884 55566777788776 445555554443322222
Q ss_pred --hHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--
Q 044796 69 --AELRSICHSNRGICFLKLGKFEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-- 136 (186)
Q Consensus 69 --~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-- 136 (186)
.+....++..+|.++...|++++|+.++++++.+ .|....++..+|.++...|++++|+..+++++++
T Consensus 121 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 121 KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3556789999999999999999999999999998 8888899999999999999999999999999986
Q ss_pred -----------------------------------------------CCCChHHHHHHHHHHHHHHHHhhccccccchhh
Q 044796 137 -----------------------------------------------DPSNNQAKRTILRKLKEMGNSILGRFGMSTDNF 169 (186)
Q Consensus 137 -----------------------------------------------~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~ 169 (186)
.|..+.++..++.++.. .|++++|+..|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~ 275 (283)
T 3edt_B 201 EKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRR-----QGKLEAAHTLE 275 (283)
T ss_dssp HHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHH-----TTCHHHHHHHH
T ss_pred HhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-----cCCHHHHHHHH
Confidence 24455667778877777 99999999999
Q ss_pred hhccc
Q 044796 170 KAVKD 174 (186)
Q Consensus 170 ~~~~~ 174 (186)
++++.
T Consensus 276 ~~al~ 280 (283)
T 3edt_B 276 DCASR 280 (283)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 98764
No 92
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.78 E-value=3.7e-19 Score=134.93 Aligned_cols=165 Identities=18% Similarity=0.141 Sum_probs=124.4
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|.++...|++++|+..|+++++.+|.++.++..+|.+. ..++.+.+...+.......|..+.++..+|.++
T Consensus 309 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (537)
T 3fp2_A 309 YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEIL 388 (537)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 3566777888888888888888888888888888888888777766 445555554444333333333447788888888
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHH------HHHHHHHHHHHh----------cCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMK------ALIRRAEAHEKL----------EHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~------~~~~lg~~~~~~----------g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
...|++++|+..++++++.+|+++. .++.+|.++... |++++|+..|+++++.+|+++.++..+
T Consensus 389 ~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l 468 (537)
T 3fp2_A 389 TDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGL 468 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 8888888888888888887776543 355667778877 888888888888888888888888888
Q ss_pred HHHHHHHHHHhhccccccchhhhhccc
Q 044796 148 LRKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 148 ~~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
+.++.. .|++++|+..|++++.
T Consensus 469 ~~~~~~-----~g~~~~A~~~~~~al~ 490 (537)
T 3fp2_A 469 AQLKLQ-----MEKIDEAIELFEDSAI 490 (537)
T ss_dssp HHHHHH-----TTCHHHHHHHHHHHHH
T ss_pred HHHHHH-----hccHHHHHHHHHHHHH
Confidence 888888 8888888888888753
No 93
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.3e-18 Score=108.05 Aligned_cols=98 Identities=21% Similarity=0.274 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
.+..+..+|..+...|++++|+..|+++++.+|+++.++..+|.++..+|++++|+..|+++++++|+++.++..+|.++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhhhccc
Q 044796 152 KEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
.. .|++++|+..|++++.
T Consensus 83 ~~-----~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 83 IA-----VKEYASALETLDAART 100 (126)
T ss_dssp HH-----TTCHHHHHHHHHHHHH
T ss_pred HH-----HhCHHHHHHHHHHHHH
Confidence 99 9999999999998853
No 94
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=5.5e-19 Score=112.75 Aligned_cols=96 Identities=24% Similarity=0.306 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcc-------cHH-----HHHHHHHHHHHhcCHHHHHHHHHHHHhc----
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELNPT-------YMK-----ALIRRAEAHEKLEHFEEAIADMKKILEF---- 136 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 136 (186)
+..+..+|..++..|+|++|+..|+++++++|+ +.. +|.++|.++..+|++++|+.+|++++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 478899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---CCCChHHH----HHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 137 ---DPSNNQAK----RTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 137 ---~p~~~~~~----~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+|++..+| +++|.++.. +|++++|+.+|++++
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~-----lgr~eEAl~~y~kAl 129 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDG-----LGRGAEAMPEFKKVV 129 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHH-----CCCHHHHHHHHHHHH
Confidence 99999999 999999999 999999999999995
No 95
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.78 E-value=2.2e-18 Score=106.55 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
..++.+|..+...|++++|+..++++++.+|+++.+|+.+|.++...|++++|+..|+++++++|+++.++..+|.++..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccchhhhhcccCCCC
Q 044796 154 MGNSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 154 ~~~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
.|++++|+..|++++..+|.
T Consensus 98 -----~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 98 -----EHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp -----HHHHHHHHHHHHHHHC----
T ss_pred -----cCCHHHHHHHHHHHHHhCcC
Confidence 99999999999998755443
No 96
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=129.08 Aligned_cols=168 Identities=8% Similarity=-0.021 Sum_probs=118.0
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcC--------------------chhHHHhhCC
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQ--------------------SASEKKEVAP 64 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 64 (186)
.+..+..+|.++...|++++|+..|+++++.+|+++.++..+|.++.... ...+...+..
T Consensus 246 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 325 (472)
T 4g1t_A 246 VTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKK 325 (472)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45678899999999999999999999999999999999998887652210 0111111111
Q ss_pred CcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHH---HHHHHHHH-HHHhcCHHHHHHHHHHHHhcC---
Q 044796 65 APEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMK---ALIRRAEA-HEKLEHFEEAIADMKKILEFD--- 137 (186)
Q Consensus 65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~lg~~-~~~~g~~~~A~~~~~~al~~~--- 137 (186)
.....|..+.++..+|.++...|++++|+.+|++++.++|++.. ++..+|.+ ....|++++|+..|.++++++
T Consensus 326 a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~ 405 (472)
T 4g1t_A 326 ADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKS 405 (472)
T ss_dssp HHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCC
T ss_pred HhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 11122223367889999999999999999999999999887643 45667754 568899999999999998764
Q ss_pred ---------------------CCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 138 ---------------------PSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 138 ---------------------p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
|.++.++..+|.++.. .|++++|+++|+++++.++
T Consensus 406 ~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~-----~g~~~~A~~~y~kALe~~~ 461 (472)
T 4g1t_A 406 REKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQEL-----NEKMQQADEDSERGLESGS 461 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHH-----HHHCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHhcCC
Confidence 5667788888888888 9999999999999975543
No 97
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.77 E-value=2.4e-18 Score=119.70 Aligned_cols=156 Identities=14% Similarity=0.160 Sum_probs=121.3
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCC---hhhhhccchhhh---------hcCchhHHHh----hCCCcchh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVP---ERAESASAPEAK---------EGQSASEKKE----VAPAPEMA 69 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~ 69 (186)
+..++.+|.+++..|++++|+..|+++++.+|++ +.+++.+|.+.. .++...+... +...|...
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 7889999999999999999999999999998865 456777887763 3444444433 33333321
Q ss_pred HHHHHH--------------HHHHHHHHhhhccHHHHHHHHHHHHhcCcc---cHHHHHHHHHHHHHh----------cC
Q 044796 70 ELRSIC--------------HSNRGICFLKLGKFEESIKECTKALELNPT---YMKALIRRAEAHEKL----------EH 122 (186)
Q Consensus 70 ~~~~~~--------------~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~----------g~ 122 (186)
....+ ++.+|.++...|++++|+..|+++++.+|+ .+.+++.+|.++..+ |+
T Consensus 132 -~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~ 210 (261)
T 3qky_A 132 -LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPER 210 (261)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccch
Confidence 11122 288999999999999999999999999998 678999999999987 99
Q ss_pred HHHHHHHHHHHHhcCCCChH---HHHHHHHHHHHHHHHhhccccccch
Q 044796 123 FEEAIADMKKILEFDPSNNQ---AKRTILRKLKEMGNSILGRFGMSTD 167 (186)
Q Consensus 123 ~~~A~~~~~~al~~~p~~~~---~~~~l~~~~~~~~~~~~~~~~~A~~ 167 (186)
+++|+..|+++++..|+++. +...++.+... .++++.+..
T Consensus 211 ~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~-----~~~~~~~~~ 253 (261)
T 3qky_A 211 YRRAVELYERLLQIFPDSPLLRTAEELYTRARQR-----LTELEGDAS 253 (261)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHH-----HHHHHTCTT
T ss_pred HHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHH-----HHHhhhhhH
Confidence 99999999999999999964 45556666666 455544443
No 98
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.77 E-value=3.6e-19 Score=128.45 Aligned_cols=155 Identities=19% Similarity=0.192 Sum_probs=128.0
Q ss_pred HHHcccHHHHHHHHHH----HHhccCCChhhhhccchhh-------------hhcCchhHHHhhCCCcchhHHHHHHHHH
Q 044796 16 LFAEGKYEEALLQYEV----ALRVASVPERAESASAPEA-------------KEGQSASEKKEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 16 ~~~~~~~~~A~~~~~~----al~~~p~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
+...+.+++|+..+.. ++.+.|.. ++...|... .......+...+.......+..+..+..
T Consensus 75 ~~~~~~~e~al~~~~~Ge~~~l~i~p~~--ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~ 152 (336)
T 1p5q_A 75 LDLPYGLERAIQRMEKGEHSIVYLKPSY--AFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKE 152 (336)
T ss_dssp GTCCHHHHHHHTTCCTTCEEEEEECTTT--TTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHhcCCCCCeEEEEECCcc--ccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHH
Confidence 3345689999999999 89999986 444444321 1122233334444555556677899999
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTY---------------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
+|.++...|++++|+..|++++.++|++ ..++.++|.++..+|++++|+..|+++++++|+++.+
T Consensus 153 ~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a 232 (336)
T 1p5q_A 153 RGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKG 232 (336)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 9999999999999999999999999998 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 144 KRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
++.+|.++.. +|++++|+..|++++..+|
T Consensus 233 ~~~lg~~~~~-----~g~~~~A~~~~~~al~l~P 261 (336)
T 1p5q_A 233 LSRRGEAHLA-----VNDFELARADFQKVLQLYP 261 (336)
T ss_dssp HHHHHHHHHH-----TTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHH-----CCCHHHHHHHHHHHHHHCC
Confidence 9999999999 9999999999999964433
No 99
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.76 E-value=6.5e-18 Score=107.58 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=88.6
Q ss_pred HHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccH------
Q 044796 16 LFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKF------ 89 (186)
Q Consensus 16 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------ 89 (186)
.-+.+.|++|+..++++++++|+++ .+|+++|.++...+++
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~a---------------------------------ea~~n~G~~l~~l~~~~~g~~a 58 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDA---------------------------------DNLTRWGGVLLELSQFHSISDA 58 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCH---------------------------------HHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCH---------------------------------HHHHHHHHHHHHhcccchhhhh
Confidence 3466889999999999999999943 6777777777777664
Q ss_pred ----HHHHHHHHHHHhcCcccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 90 ----EESIKECTKALELNPTYMKALIRRAEAHEKLE-----------HFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 90 ----~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
++|+..|+++++++|+++.+|+++|.+|..+| ++++|+.+|++|++++|++...+..+..
T Consensus 59 l~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 59 KQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 69999999999999999999999999999885 8999999999999999999877766553
No 100
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.76 E-value=3.3e-18 Score=121.05 Aligned_cols=166 Identities=19% Similarity=0.143 Sum_probs=136.5
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc--------CCChhhhhccchhh-hhcCchhHHHhhCCCcch------
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVA--------SVPERAESASAPEA-KEGQSASEKKEVAPAPEM------ 68 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------ 68 (186)
..+..+..+|.++...|++++|+.+|++++... |....++..+|.++ ..++.+.+...+......
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 146 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 146 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcC
Confidence 456788999999999999999999999999884 44556777777776 445555444433322221
Q ss_pred --hHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--
Q 044796 69 --AELRSICHSNRGICFLKLGKFEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-- 136 (186)
Q Consensus 69 --~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-- 136 (186)
.+....++..+|.++...|++++|+.++++++.. +|....++..+|.++...|++++|+..++++++.
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 147 KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 2456688999999999999999999999999998 7888899999999999999999999999999974
Q ss_pred -----------------------------------------------CCCChHHHHHHHHHHHHHHHHhhccccccchhh
Q 044796 137 -----------------------------------------------DPSNNQAKRTILRKLKEMGNSILGRFGMSTDNF 169 (186)
Q Consensus 137 -----------------------------------------------~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~ 169 (186)
+|..+.++..+|.++.. .|++++|+.+|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~ 301 (311)
T 3nf1_A 227 EREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-----QGKFEAAETLE 301 (311)
T ss_dssp HHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-----HTCHHHHHHHH
T ss_pred HhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-----CCCHHHHHHHH
Confidence 46667788888888888 99999999999
Q ss_pred hhccc
Q 044796 170 KAVKD 174 (186)
Q Consensus 170 ~~~~~ 174 (186)
++++.
T Consensus 302 ~~al~ 306 (311)
T 3nf1_A 302 EAAMR 306 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98853
No 101
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.76 E-value=1.5e-17 Score=115.84 Aligned_cols=156 Identities=17% Similarity=0.078 Sum_probs=102.5
Q ss_pred hHhHHHHcccHHHHHHHHHHHHhcc----CCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhh
Q 044796 12 EGNKLFAEGKYEEALLQYEVALRVA----SVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKL 86 (186)
Q Consensus 12 ~g~~~~~~~~~~~A~~~~~~al~~~----p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 86 (186)
++......|++++|+..|+++++.. |.++.++..+|.+. ..++.+.+...+.......|..+.++..+|.++...
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQA 90 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred eeeccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHc
Confidence 3444556799999999999999984 44455666666655 344444444333322222233446777777777777
Q ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccc
Q 044796 87 GKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMST 166 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~ 166 (186)
|++++|+..+++++..+|+++.++..+|.++...|++++|+..|+++++++|+++.....++.. .. .|++++|+
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~-----~~~~~~A~ 164 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQ-----KLDEKQAK 164 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HH-----HHCHHHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HH-----hcCHHHHH
Confidence 7777777777777777777777777777777777777777777777777777776555444422 22 46777777
Q ss_pred hhhhhcc
Q 044796 167 DNFKAVK 173 (186)
Q Consensus 167 ~~~~~~~ 173 (186)
..+++++
T Consensus 165 ~~~~~~~ 171 (275)
T 1xnf_A 165 EVLKQHF 171 (275)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776554
No 102
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.76 E-value=3.9e-18 Score=121.58 Aligned_cols=161 Identities=13% Similarity=-0.085 Sum_probs=115.6
Q ss_pred HHHHHHHhHhHHHH-------cccH-------HHHHHHHHHHHh-ccCCChhhhhccchhh-hhcCchhHH----HhhCC
Q 044796 5 EANEAKLEGNKLFA-------EGKY-------EEALLQYEVALR-VASVPERAESASAPEA-KEGQSASEK----KEVAP 64 (186)
Q Consensus 5 ~a~~~~~~g~~~~~-------~~~~-------~~A~~~~~~al~-~~p~~~~~~~~~~~~~-~~~~~~~~~----~~~~~ 64 (186)
.++.|+..|..+.. .|++ ++|+..|+++++ ++|++..+|..++... ..++.+.+. +++..
T Consensus 49 ~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 128 (308)
T 2ond_A 49 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI 128 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Confidence 45667777776653 4664 888888888888 6888888888877765 334433333 34444
Q ss_pred CcchhHHHHH-HHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCChH
Q 044796 65 APEMAELRSI-CHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHE-KLEHFEEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 65 ~~~~~~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~ 142 (186)
.|.. +. +|..+|.++...|++++|+..|+++++.+|....++...+.+.. ..|++++|...|+++++.+|+++.
T Consensus 129 ~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 204 (308)
T 2ond_A 129 EDID----PTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPE 204 (308)
T ss_dssp SSSC----THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHH
T ss_pred cccC----ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Confidence 4432 24 78888888888888888888888888888877777766655543 368888888888888888888888
Q ss_pred HHHHHHHHHHHHHHHhhccccccchhhhhccc
Q 044796 143 AKRTILRKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
+|..++..+.. .|++++|+..|++++.
T Consensus 205 ~~~~~~~~~~~-----~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 205 YVLAYIDYLSH-----LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHT-----TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----CCCHHHHHHHHHHHHh
Confidence 88888877777 7778888888877754
No 103
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.76 E-value=5e-18 Score=104.27 Aligned_cols=101 Identities=16% Similarity=0.149 Sum_probs=86.4
Q ss_pred HcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHH
Q 044796 18 AEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECT 97 (186)
Q Consensus 18 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 97 (186)
..|++++|+.+|++++++.+++ | ..+.++..+|.++..+|++++|+..++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~--------------------------p----~~~~~~~~lg~~~~~~~~~~~A~~~~~ 51 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQG--------------------------K----DLAECYLGLGSTFRTLGEYRKAEAVLA 51 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCH--------------------------H----HHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCC--------------------------c----cHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4689999999999999985331 1 145899999999999999999999999
Q ss_pred HHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 98 KALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 98 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
++++.+|+++.+++.+|.++..+|++++|+..|++++...|+++.+.....
T Consensus 52 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 52 NGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred HHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999988765443
No 104
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.75 E-value=7.7e-18 Score=109.34 Aligned_cols=102 Identities=18% Similarity=0.156 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRK 150 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 150 (186)
..+..+..+|.++...|++++|+..|++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++.++..+|.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccchhhhhcc--cCCC
Q 044796 151 LKEMGNSILGRFGMSTDNFKAVK--DPNT 177 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~~--~~~~ 177 (186)
+.. +|++++|+.+|++++ +|+.
T Consensus 89 ~~~-----~g~~~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 89 RFD-----MADYKGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp HHH-----TTCHHHHHHHHHHHHHHHSSS
T ss_pred HHH-----ccCHHHHHHHHHHHHHhCCCc
Confidence 999 999999999999885 5543
No 105
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.75 E-value=1.5e-17 Score=118.52 Aligned_cols=160 Identities=11% Similarity=-0.031 Sum_probs=132.5
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChh-hhhccchhh-hhcCchhHH----HhhCCCcchhHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPER-AESASAPEA-KEGQSASEK----KEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 78 (186)
.+..|..+|..+...|++++|...|++++++.|.++. +|..++... ..++.+.+. +++...|.. ..+|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----~~~~~~ 173 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR----HHVYVT 173 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC----THHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----HHHHHH
Confidence 4568899999999999999999999999999999987 888888765 444444444 344444433 366666
Q ss_pred HHHHHh-hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCC-ChHHHHHHHHHHHH
Q 044796 79 RGICFL-KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF---DPS-NNQAKRTILRKLKE 153 (186)
Q Consensus 79 ~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~-~~~~~~~l~~~~~~ 153 (186)
.+.... ..|++++|+..|+++++.+|+++.+|..+|.++...|++++|...|++++.. .|+ ...+|..++..+..
T Consensus 174 ~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~ 253 (308)
T 2ond_A 174 AALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESN 253 (308)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 666644 3799999999999999999999999999999999999999999999999995 553 67889999988888
Q ss_pred HHHHhhccccccchhhhhcc
Q 044796 154 MGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 154 ~~~~~~~~~~~A~~~~~~~~ 173 (186)
.|+++.|...+++++
T Consensus 254 -----~g~~~~a~~~~~~a~ 268 (308)
T 2ond_A 254 -----IGDLASILKVEKRRF 268 (308)
T ss_dssp -----HSCHHHHHHHHHHHH
T ss_pred -----cCCHHHHHHHHHHHH
Confidence 888888888888875
No 106
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.74 E-value=1.9e-17 Score=108.59 Aligned_cols=139 Identities=19% Similarity=0.166 Sum_probs=121.0
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
.+..+..+|.++...|++++|+.+++++++..|.++.++..++.+. ..++.+.+...+.......+..+.++..+|.++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 4677899999999999999999999999999999999999998876 556665555544433333444568999999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
...|++++|+..+++++..+|.++.++..+|.++...|++++|+..++++++.+|+++..
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 999999999999999999999999999999999999999999999999999999987654
No 107
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.74 E-value=9.2e-18 Score=118.75 Aligned_cols=165 Identities=19% Similarity=0.189 Sum_probs=138.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc--------cCCChhhhhccchhh-hhcCchhHHHhhCCCcc-------
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRV--------ASVPERAESASAPEA-KEGQSASEKKEVAPAPE------- 67 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------- 67 (186)
..+..+..+|.+++..|++++|+.+|++++++ .|....++..+|.++ ..++.+.+...+.....
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999995 566667778888776 44555544443322221
Q ss_pred -hhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcC--------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--
Q 044796 68 -MAELRSICHSNRGICFLKLGKFEESIKECTKALELN--------PTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-- 136 (186)
Q Consensus 68 -~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-- 136 (186)
..+....++..+|.++...|++++|+..+++++.+. |....++..+|.++...|++++|+..|++++.+
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 184 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQ 184 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 134567899999999999999999999999999874 777889999999999999999999999999998
Q ss_pred ------CCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 137 ------DPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 137 ------~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+|....++..++.++.. .|++++|+..|++++
T Consensus 185 ~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 185 TKLGPDDPNVAKTKNNLASCYLK-----QGKFKQAETLYKEIL 222 (311)
T ss_dssp HTSCTTCHHHHHHHHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 77778889999999988 899999999998875
No 108
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.74 E-value=1.6e-17 Score=117.59 Aligned_cols=136 Identities=13% Similarity=0.049 Sum_probs=104.8
Q ss_pred cHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHH----hhCCCcc--hhHHHHHHHHHHHHHHhhhccHHHHHH
Q 044796 21 KYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKK----EVAPAPE--MAELRSICHSNRGICFLKLGKFEESIK 94 (186)
Q Consensus 21 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~A~~ 94 (186)
++++|+.+|.++.... ...++.+.+.. ++...+. ..+..+.++.++|.++..+|++++|+.
T Consensus 32 ~~~~A~~~~~~a~~~~-------------~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~ 98 (292)
T 1qqe_A 32 KFEEAADLCVQAATIY-------------RLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVD 98 (292)
T ss_dssp HHHHHHHHHHHHHHHH-------------HHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHH-------------HHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 5999999999985432 12222222222 2221111 122346899999999999999999999
Q ss_pred HHHHHHhcCccc------HHHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCC------hHHHHHHHHHHHHHHHHhhcc
Q 044796 95 ECTKALELNPTY------MKALIRRAEAHEKL-EHFEEAIADMKKILEFDPSN------NQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 95 ~~~~al~~~p~~------~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~~ 161 (186)
++++++++.|.. ..++.++|.++... |++++|+.+|++++++.|.+ ..++..+|.++.. +|+
T Consensus 99 ~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~-----~g~ 173 (292)
T 1qqe_A 99 SLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL-----DGQ 173 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH-----hCC
Confidence 999999997753 56899999999996 99999999999999998865 4567788888888 999
Q ss_pred ccccchhhhhccc
Q 044796 162 FGMSTDNFKAVKD 174 (186)
Q Consensus 162 ~~~A~~~~~~~~~ 174 (186)
+++|+.+|++++.
T Consensus 174 ~~~A~~~~~~al~ 186 (292)
T 1qqe_A 174 YIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 109
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.74 E-value=1.5e-16 Score=107.25 Aligned_cols=136 Identities=15% Similarity=0.093 Sum_probs=94.2
Q ss_pred hHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhcc--
Q 044796 12 EGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGK-- 88 (186)
Q Consensus 12 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-- 88 (186)
+|.++...|++++|+.+|+++++++|+++.++..+|.++ ..++.+.+...+.......|.++.++..+|.++...|+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999999887777777665 44555555544444333444445777777777765543
Q ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 89 FEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
...+...+++++..+|. ..+++.+|.++...|++++|+.+|+++++++|++ .+...+..
T Consensus 140 ~~~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~ 198 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKM-QYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDK 198 (208)
T ss_dssp HHHHHHHHC---CCCHH-HHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCch-hHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHH
Confidence 34556666666543332 3356677777777888999999999999999974 34444443
No 110
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.74 E-value=4.2e-17 Score=119.36 Aligned_cols=163 Identities=17% Similarity=0.096 Sum_probs=130.2
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhcc---CC---Chhhhhccchhh-hhcCchhHHH----hh---CCCcchhHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVA---SV---PERAESASAPEA-KEGQSASEKK----EV---APAPEMAEL 71 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---p~---~~~~~~~~~~~~-~~~~~~~~~~----~~---~~~~~~~~~ 71 (186)
...++.+|..++..|++++|+.+|++++++. |+ ...++..+|.+. ..++...+.. ++ ...+...+.
T Consensus 103 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 182 (383)
T 3ulq_A 103 YYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIR 182 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHH
Confidence 4567889999999999999999999999872 22 345677777766 4444433332 22 222222455
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----cC-CC
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKKILE-----FD-PS 139 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----~~-p~ 139 (186)
.+.++..+|.++..+|++++|+.++++++.+.|.. ..++.++|.++..+|++++|+.+|+++++ .+ |.
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 67899999999999999999999999999885533 35899999999999999999999999999 46 77
Q ss_pred ChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 140 NNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.+.++..+|.++.. .|++++|+.++++++
T Consensus 263 ~~~~~~~l~~~~~~-----~g~~~~A~~~~~~al 291 (383)
T 3ulq_A 263 LPQAYFLITQIHYK-----LGKIDKAHEYHSKGM 291 (383)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCHHHHHHHHHHHH
Confidence 88889999999988 999999999998875
No 111
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.73 E-value=1.1e-16 Score=119.69 Aligned_cols=171 Identities=18% Similarity=0.065 Sum_probs=110.6
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhc---------cCCChhhhhccchhh-hhcCchhHHHhhCCC--------cc
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRV---------ASVPERAESASAPEA-KEGQSASEKKEVAPA--------PE 67 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~---------~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~ 67 (186)
+..+..+|.++...|++++|+++|++++++ +|.....+..+|.++ ..++.+.+...+... ..
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc
Confidence 456788999999999999999999999987 344444555666555 344444433222111 11
Q ss_pred hhHHHHHHHHHHHHHHhhh--ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH---hcCHHHHHHHHHHHHhcCCCChH
Q 044796 68 MAELRSICHSNRGICFLKL--GKFEESIKECTKALELNPTYMKALIRRAEAHEK---LEHFEEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 68 ~~~~~~~~~~~~a~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~---~g~~~~A~~~~~~al~~~p~~~~ 142 (186)
..+..+.++..+|.++... ++|++|+.+|+++++++|+++.++..+|.++.. .+++++|+..|+++++++|+++.
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~ 210 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQY 210 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHH
T ss_pred cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchH
Confidence 1112346666666665543 467888888888888888888887777777544 45667788888888888888887
Q ss_pred HHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 143 AKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
++..++..+..++.. .+++++|+..+++++..++
T Consensus 211 ~~~~l~~~~~~~~~~-~~~~~~a~~~~~~al~~~~ 244 (472)
T 4g1t_A 211 LKVLLALKLHKMREE-GEEEGEGEKLVEEALEKAP 244 (472)
T ss_dssp HHHHHHHHHHHCC-------CHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhCc
Confidence 777777655553332 4677778888877754333
No 112
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.73 E-value=6.5e-17 Score=109.38 Aligned_cols=167 Identities=9% Similarity=-0.081 Sum_probs=136.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhc----CchhHHHhhCCCcchhHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEG----QSASEKKEVAPAPEMAELRSICHSNR 79 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (186)
..+.+++.+|..+...+++++|+.+|+++++. .++.+++.+|.++..+ +...+...+... ..+..+.+++.+
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A--~~~g~~~a~~~L 91 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIRNPQQADYPQARQLAEKA--VEAGSKSGEIVL 91 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHH--HHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH--HHCCCHHHHHHH
Confidence 35788999999999999999999999999875 6788999999887554 444444443322 122356899999
Q ss_pred HHHHhh----hccHHHHHHHHHHHHhcCc--ccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 80 GICFLK----LGKFEESIKECTKALELNP--TYMKALIRRAEAHEK----LEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 80 a~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
|.++.. .+++++|+.+|+++++..| .++.+++.+|.++.. .+++++|+.+|+++++. |.++.+.+.++.
T Consensus 92 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~ 170 (212)
T 3rjv_A 92 ARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGM 170 (212)
T ss_dssp HHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 999998 8899999999999999988 569999999999999 88999999999999998 778889999998
Q ss_pred HHHHHHH-HhhccccccchhhhhcccC
Q 044796 150 KLKEMGN-SILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 150 ~~~~~~~-~~~~~~~~A~~~~~~~~~~ 175 (186)
++..-.. ....++++|+.+|+++.+.
T Consensus 171 ~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 171 MFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp HHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 8765110 0244889999999988644
No 113
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.72 E-value=3.9e-17 Score=98.69 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=60.1
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhh
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKL 86 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 86 (186)
..+..+|.+++..|++++|+.+|+++++.+|.+ +.++..+|.++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------------------------~~~~~~~a~~~~~~ 53 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---------------------------------SKYWLMKGKALYNL 53 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---------------------------------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---------------------------------HHHHHHHHHHHHHc
Confidence 344555666666666666666666666665551 24555566666666
Q ss_pred ccHHHHHHHHHHHHhcCcc--cHHHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCC
Q 044796 87 GKFEESIKECTKALELNPT--YMKALIRRAEAHEKL-EHFEEAIADMKKILEFDPSN 140 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~ 140 (186)
|++++|+..++++++.+|. ++.++..+|.++..+ |++++|+.++++++...|.+
T Consensus 54 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 54 ERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred cCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 6666666666666666666 566666666666666 66666666666666665554
No 114
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.72 E-value=2.9e-16 Score=103.00 Aligned_cols=110 Identities=16% Similarity=0.249 Sum_probs=101.1
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH-H
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC-F 83 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~ 83 (186)
.+..++.+|.++...|++++|+.+|+++++++|.+ +.++..+|.+ +
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------------------------~~~~~~la~~l~ 89 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN---------------------------------AELYAALATVLY 89 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC---------------------------------HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---------------------------------HHHHHHHHHHHH
Confidence 46789999999999999999999999999999993 3788899999 8
Q ss_pred hhhccH--HHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 84 LKLGKF--EESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 84 ~~~~~~--~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
...|++ ++|+..+++++..+|+++.+++.+|.++...|++++|+..|+++++++|+++.....+
T Consensus 90 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 155 (177)
T 2e2e_A 90 YQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLV 155 (177)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHH
Confidence 899998 9999999999999999999999999999999999999999999999999987654433
No 115
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.72 E-value=2.7e-17 Score=126.25 Aligned_cols=121 Identities=14% Similarity=0.118 Sum_probs=95.8
Q ss_pred cccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHH
Q 044796 19 EGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTK 98 (186)
Q Consensus 19 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 98 (186)
.|++++|+..|+++++.+|+ .+.++..+|.++...|++++|+..+++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~---------------------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~ 48 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ---------------------------------DFVAWLMLADAELGMGDTTAGEMAVQR 48 (568)
T ss_dssp -------------------C---------------------------------CHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCC---------------------------------CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 47899999999999999999 337899999999999999999999999
Q ss_pred HHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 99 ALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 99 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
+++.+|+++.++..+|.++..+|++++|+..|+++++++|+++.++..+|.++.. .|++++|++.|++++..++
T Consensus 49 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-----~g~~~~A~~~~~~al~~~p 122 (568)
T 2vsy_A 49 GLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-----AGQAEAAAAAYTRAHQLLP 122 (568)
T ss_dssp HHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHCT
T ss_pred HHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999999864433
No 116
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.2e-16 Score=95.51 Aligned_cols=96 Identities=14% Similarity=0.200 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------hHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN------NQAKR 145 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~ 145 (186)
.+..+..+|.++...|++++|+..|++++..+|+++.+++.+|.++..+|++++|+..|+++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999999999999999999 88888
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhc
Q 044796 146 TILRKLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 146 ~l~~~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
.++.++.. .|+++.|+..+++.
T Consensus 83 ~~~~~~~~-----~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 83 RLELAQGA-----VGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHH-----HHCCCCCSSSSSSC
T ss_pred HHHHHHHH-----HHhHhhhHhHHHHh
Confidence 88888888 88999999988875
No 117
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.72 E-value=6.9e-17 Score=101.44 Aligned_cols=97 Identities=20% Similarity=0.192 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
.+..+..+|.++...|++++|+..|++++..+|+++.+++.+|.++..+|++++|+..++++++++|+++.++..+|.++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhhhcc
Q 044796 152 KEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.. .|++++|+..|++++
T Consensus 88 ~~-----~~~~~~A~~~~~~a~ 104 (137)
T 3q49_B 88 LE-----MESYDEAIANLQRAY 104 (137)
T ss_dssp HH-----TTCHHHHHHHHHHHH
T ss_pred HH-----HhhHHHHHHHHHHHH
Confidence 99 999999999999885
No 118
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.71 E-value=3.8e-17 Score=105.86 Aligned_cols=101 Identities=11% Similarity=0.126 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc------------------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL------------------NPTYMKALIRRAEAHEKLEHFEEAIADMKKI 133 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (186)
.+..+..+|..++..|+|++|+..|++++.. +|..+.++.++|.++..+|++++|+..+.++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3578999999999999999999999999999 7888899999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 134 LEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 134 l~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
++++|+++.+++.+|.++.. +|++++|+..|++++..+|
T Consensus 90 l~~~p~~~~a~~~~g~~~~~-----~g~~~~A~~~~~~al~l~p 128 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIA-----AWKLDEAEEDLKLLLRNHP 128 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHCG
T ss_pred HhcCCcchHHHHHHHHHHHH-----HhcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999 9999999999999864433
No 119
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.71 E-value=2.4e-16 Score=110.22 Aligned_cols=163 Identities=13% Similarity=0.090 Sum_probs=118.9
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhh-----hcCchhHHHhhCCCcchhHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAK-----EGQSASEKKEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
..+..++.+|..+...|++++|+.+|+++++ |.++.++..+|.++. .++.+.+...+....... .+.++..
T Consensus 4 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~ 79 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHL 79 (273)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHH
Confidence 3567888899999999999999999999888 777788888887763 344444443332221111 4578888
Q ss_pred HHHHHhh----hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 044796 79 RGICFLK----LGKFEESIKECTKALELNPTYMKALIRRAEAHEK----LEHFEEAIADMKKILEFDPSNNQAKRTILRK 150 (186)
Q Consensus 79 ~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 150 (186)
+|.++.. .+++++|+.+|+++++.+ ++.+++.+|.++.. .+++++|+.+|+++++.+ ++.++..++.+
T Consensus 80 lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~ 155 (273)
T 1ouv_A 80 LGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSL 155 (273)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred HHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHH
Confidence 8888888 888888888888888873 78888888888888 888888888888888865 56677777766
Q ss_pred HHHHHHHhhccccccchhhhhcccC
Q 044796 151 LKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
+.. |....+++++|+.+|+++++.
T Consensus 156 ~~~-~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 156 YDA-GRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp HHH-TSSSCCCHHHHHHHHHHHHHT
T ss_pred HHc-CCCCCCCHHHHHHHHHHHHHC
Confidence 543 111256677777777766544
No 120
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.71 E-value=1.9e-16 Score=115.75 Aligned_cols=164 Identities=12% Similarity=0.035 Sum_probs=130.6
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCC------Chhhhhccchhh-hhcCchhHH----HhhC---CCcchhH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASV------PERAESASAPEA-KEGQSASEK----KEVA---PAPEMAE 70 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~-~~~~~~~~~----~~~~---~~~~~~~ 70 (186)
....++.+|..++..|++++|+.+|++++++.+. ...++..+|.+. ..++...+. +++. ..+...+
T Consensus 100 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 179 (378)
T 3q15_A 100 KYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSI 179 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchh
Confidence 4567888999999999999999999999987543 334666677665 334443332 2222 2222233
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCc------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----cCCC
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNP------TYMKALIRRAEAHEKLEHFEEAIADMKKILE-----FDPS 139 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----~~p~ 139 (186)
..+.++..+|.++...|++++|+.++++++.+.+ ....++.++|.++..+|++++|+.+|++++. .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 4568999999999999999999999999998633 2356899999999999999999999999999 7888
Q ss_pred ChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 140 NNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.+.++..+|.++.. .|++++|+..+++++
T Consensus 260 ~~~~~~~la~~~~~-----~g~~~~A~~~~~~al 288 (378)
T 3q15_A 260 LPKVLFGLSWTLCK-----AGQTQKAFQFIEEGL 288 (378)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCHHHHHHHHHHHH
Confidence 88899999999988 999999999999885
No 121
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.70 E-value=6.7e-17 Score=97.63 Aligned_cols=99 Identities=20% Similarity=0.192 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS--NNQAKRTILRKL 151 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~ 151 (186)
..+..+|.++...|++++|+..++++++.+|.++.++..+|.++...|++++|+..|+++++.+|. +..++..++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999 999999999888
Q ss_pred HHHHHHhh-ccccccchhhhhcccCCC
Q 044796 152 KEMGNSIL-GRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 152 ~~~~~~~~-~~~~~A~~~~~~~~~~~~ 177 (186)
.. . |++++|++++++++...+
T Consensus 87 ~~-----~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 87 RY-----IEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp TT-----CSSCSHHHHHHHHHHGGGCC
T ss_pred HH-----HhCCHHHHHHHHHHHhhccc
Confidence 88 9 999999999999875444
No 122
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.70 E-value=1.4e-15 Score=102.37 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=99.3
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK 85 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 85 (186)
+..++.+|.++...|++++|+.+|++++..+|. .+.++..+|.++..
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---------------------------------~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH---------------------------------LAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------------------------CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---------------------------------chHHHHHHHHHHHH
Confidence 568999999999999999999999999999998 23789999999999
Q ss_pred hccHHHHHHHHHHHHhcCcccH----------------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 86 LGKFEESIKECTKALELNPTYM----------------KALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~~----------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
.|++++|+..++++++..|.+. .+++.+|.++..+|++++|+..|+++++++|++.......+
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a 162 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKA 162 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHH
Confidence 9999999999999999777655 99999999999999999999999999999998765444433
No 123
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.70 E-value=1.4e-17 Score=124.80 Aligned_cols=153 Identities=14% Similarity=0.133 Sum_probs=121.2
Q ss_pred ccHHHHHHHHHH----HHhccCCChhhhhccchhh-------------hhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 20 GKYEEALLQYEV----ALRVASVPERAESASAPEA-------------KEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 20 ~~~~~A~~~~~~----al~~~p~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
..++.|+..+.+ ++.++|.. ++...+... .......+...+.......+..+..+..+|.+
T Consensus 200 ~~~e~al~~~~~ge~~~l~i~P~~--ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~ 277 (457)
T 1kt0_A 200 IGIDKALEKMQREEQCILYLGPRY--GFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTV 277 (457)
T ss_dssp HHHHHHHTTCCBTCEEEEEECGGG--TTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCCCCEEEEEECccc--ccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHH
Confidence 367777777777 67777764 343333221 11122333334445555566677899999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTY---------------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
++..|+|++|+..|++++.++|.+ ..+++++|.|+..+|++++|+.+|+++++++|++..+++++
T Consensus 278 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~ 357 (457)
T 1kt0_A 278 YFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRR 357 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 999999999999999999999988 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccchhhhhcccCCCCc
Q 044796 148 LRKLKEMGNSILGRFGMSTDNFKAVKDPNTGA 179 (186)
Q Consensus 148 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 179 (186)
|.++.. ++++++|+..|++++..+|..
T Consensus 358 g~a~~~-----~g~~~~A~~~~~~al~l~P~~ 384 (457)
T 1kt0_A 358 GEAQLL-----MNEFESAKGDFEKVLEVNPQN 384 (457)
T ss_dssp HHHHHH-----TTCHHHHHHHHHHHHTTC---
T ss_pred HHHHHH-----ccCHHHHHHHHHHHHHhCCCC
Confidence 999999 999999999999997554443
No 124
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.69 E-value=1.1e-16 Score=117.67 Aligned_cols=165 Identities=15% Similarity=0.145 Sum_probs=130.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCCh----hhhhccchhh-hhcCchhHHHhhCCCcc------hhHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPE----RAESASAPEA-KEGQSASEKKEVAPAPE------MAELR 72 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~ 72 (186)
..+..+..+|..++..|++++|+.+|+++++..|+++ .++..+|.++ ..++.+.+...+..... ..+..
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 125 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGE 125 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHH
Confidence 4567788999999999999999999999999999987 4666777766 44555444443322222 24556
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhc------CcccHHHHHHHHHHHHHhcC-----------------HHHHHHH
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALEL------NPTYMKALIRRAEAHEKLEH-----------------FEEAIAD 129 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~-----------------~~~A~~~ 129 (186)
..++..+|.++...|++++|+..+++++.. .|....++..+|.++...|+ +++|+..
T Consensus 126 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~ 205 (411)
T 4a1s_A 126 AKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEF 205 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHH
Confidence 788999999999999999999999999988 56677889999999999999 9999999
Q ss_pred HHHHHhcCC------CChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 130 MKKILEFDP------SNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 130 ~~~al~~~p------~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+++++++.+ ....++..+|.++.. .|++++|+.+|++++
T Consensus 206 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~al 250 (411)
T 4a1s_A 206 YQENLKLMRDLGDRGAQGRACGNLGNTYYL-----LGDFQAAIEHHQERL 250 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----cCChHHHHHHHHHHH
Confidence 999887642 334567777777777 888888988888774
No 125
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=5.5e-16 Score=94.31 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLK 152 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 152 (186)
+..+..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..++++++.+|+++.++..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhccccccchhhhhcccCCCC
Q 044796 153 EMGNSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 153 ~~~~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
. .|++++|+..|++++..+|.
T Consensus 84 ~-----~~~~~~A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 84 F-----LNRFEEAKRTYEEGLKHEAN 104 (118)
T ss_dssp H-----TTCHHHHHHHHHHHHTTCTT
T ss_pred H-----HhhHHHHHHHHHHHHHcCCC
Confidence 8 99999999999998655443
No 126
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.69 E-value=1.4e-16 Score=113.45 Aligned_cols=167 Identities=8% Similarity=-0.008 Sum_probs=124.9
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCC------hhhhhccchhh-hhcCchhHHHhh----CCCc--chhH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVP------ERAESASAPEA-KEGQSASEKKEV----APAP--EMAE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~-~~~~~~~~~~~~----~~~~--~~~~ 70 (186)
.....+...|.++...|++++|+.+|.+++.+.+.. ..++..+|.++ ..++...+...+ ...+ ....
T Consensus 34 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~ 113 (307)
T 2ifu_A 34 SAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPD 113 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 456678888999999999999999999999987654 23555666665 334444443322 2211 1122
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChH--
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQ-- 142 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-- 142 (186)
....++.++|.++.. |++++|+.+|++++.+.|.. ..++.++|.++..+|++++|+.+|++++.+.|.+..
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 345788999999999 99999999999999987653 578999999999999999999999999998776542
Q ss_pred ----HHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 143 ----AKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 143 ----~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
++..++.++.. .|++++|+.+|++++ ..|
T Consensus 193 ~~~~~~~~~g~~~~~-----~g~~~~A~~~~~~al-~~p 225 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLH-----RADYVAAQKCVRESY-SIP 225 (307)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHT-TST
T ss_pred HHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHh-CCC
Confidence 44445544444 799999999999887 444
No 127
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.68 E-value=5.3e-16 Score=99.44 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=114.9
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..+..+|..+...|++++|+.++.++++..+... .......++..+|.++
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~---------------------------~~~~~~~~~~~l~~~~ 59 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG---------------------------DKAAERIAYSNLGNAY 59 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT---------------------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC---------------------------CchHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999876511 1112347889999999
Q ss_pred hhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------hHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN------NQAKRTILRKL 151 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~ 151 (186)
...|++++|+..+++++...+.. ..++..+|.++...|++++|+..+++++.+.+.. ..++..++.++
T Consensus 60 ~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 139 (164)
T 3ro3_A 60 IFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 139 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHH
Confidence 99999999999999999875543 6689999999999999999999999999874322 45566777777
Q ss_pred HHHHHHhhccccccchhhhhcc
Q 044796 152 KEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.. .|++++|+..+++++
T Consensus 140 ~~-----~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 140 TA-----LGNHDQAMHFAEKHL 156 (164)
T ss_dssp HH-----HTCHHHHHHHHHHHH
T ss_pred HH-----ccCHHHHHHHHHHHH
Confidence 66 899999999998875
No 128
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.68 E-value=4.9e-16 Score=105.92 Aligned_cols=137 Identities=11% Similarity=-0.007 Sum_probs=109.7
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChh---hhhccchhhhh-------------------cCch----hHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPER---AESASAPEAKE-------------------GQSA----SEK 59 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~-------------------~~~~----~~~ 59 (186)
..+++.+|.+++..|++++|+..|+++++.+|+++. +++.+|.+... ++.+ ...
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 568999999999999999999999999999999876 67777765422 2222 233
Q ss_pred HhhCCCcchhHHH-------------HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH---HHHHHHHHHHHHhcCH
Q 044796 60 KEVAPAPEMAELR-------------SICHSNRGICFLKLGKFEESIKECTKALELNPTYM---KALIRRAEAHEKLEHF 123 (186)
Q Consensus 60 ~~~~~~~~~~~~~-------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~~g~~ 123 (186)
..+...|...... ......+|.++...|++++|+..|+++++..|+++ .+++.+|.++..+|++
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 4455555443111 12236789999999999999999999999999875 7899999999999999
Q ss_pred HHHHHHHHHHHhcCCCChH
Q 044796 124 EEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 124 ~~A~~~~~~al~~~p~~~~ 142 (186)
++|+..++++....|++.+
T Consensus 201 ~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 201 AQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHHHhhCCCchh
Confidence 9999999999999998754
No 129
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.67 E-value=8.8e-17 Score=117.67 Aligned_cols=164 Identities=18% Similarity=0.129 Sum_probs=116.0
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChh------hhhccchhh-hhcC--------------------chh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPER------AESASAPEA-KEGQ--------------------SAS 57 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~~~~~~-~~~~--------------------~~~ 57 (186)
.+..+..+|.++...|++++|+.++.+++.+.|.... ++..+|.+. ..++ ...
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~ 165 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQA 165 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHH
Confidence 4567778888888888888888888888887765432 555566554 3333 322
Q ss_pred HHHhhCCCc------chhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH------HHHHHHHHHHHHhcCHHH
Q 044796 58 EKKEVAPAP------EMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYM------KALIRRAEAHEKLEHFEE 125 (186)
Q Consensus 58 ~~~~~~~~~------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~g~~~~ 125 (186)
+...+.... ...+....++..+|.++...|++++|+..+++++++.|... .++..+|.++...|++++
T Consensus 166 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 245 (406)
T 3sf4_A 166 AVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFET 245 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHH
Confidence 222211111 11334457788888888888888888888888888765443 378888888888889988
Q ss_pred HHHHHHHHHhcCCCC------hHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 126 AIADMKKILEFDPSN------NQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 126 A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
|+..+++++.+.|.. ..++..+|.++.. .|++++|+..|++++
T Consensus 246 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~a~ 294 (406)
T 3sf4_A 246 ASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL-----LQDYEKAIDYHLKHL 294 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHH
Confidence 988888888877665 5566777777776 888888888887764
No 130
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=2.1e-16 Score=121.04 Aligned_cols=168 Identities=14% Similarity=-0.026 Sum_probs=138.3
Q ss_pred hHHHHHHHhHhHHHHccc----------HHHHHHHHHHHHhccCCChhhhhccchhhhh-c--CchhHHHhhCCCcchhH
Q 044796 4 NEANEAKLEGNKLFAEGK----------YEEALLQYEVALRVASVPERAESASAPEAKE-G--QSASEKKEVAPAPEMAE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~ 70 (186)
+...+|..++.++...|+ +++++..+++++..+|++..+|..++.+... + ..+.+...+......++
T Consensus 61 ~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~ 140 (567)
T 1dce_A 61 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE 140 (567)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcc
Confidence 346789999999999888 9999999999999999999999998887633 3 22444444443334444
Q ss_pred HHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHh--------------cCHHHHHHHHHHHHh
Q 044796 71 LRSICHSNRGICFLKLG-KFEESIKECTKALELNPTYMKALIRRAEAHEKL--------------EHFEEAIADMKKILE 135 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------g~~~~A~~~~~~al~ 135 (186)
.+..+|..++.+....| .+++++.+++++++.+|.+..+|+.+|.++..+ +.+++|++++.+++.
T Consensus 141 ~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~ 220 (567)
T 1dce_A 141 RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 220 (567)
T ss_dssp TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHh
Confidence 45599999999999999 899999999999999999999999999998885 668999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhhccccc------------cchhhhhcccCC
Q 044796 136 FDPSNNQAKRTILRKLKEMGNSILGRFGM------------STDNFKAVKDPN 176 (186)
Q Consensus 136 ~~p~~~~~~~~l~~~~~~~~~~~~~~~~~------------A~~~~~~~~~~~ 176 (186)
++|++..+|..++.++.. .+++++ |+.+|.+++..+
T Consensus 221 ~~P~~~saW~y~~~ll~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~ 268 (567)
T 1dce_A 221 TDPNDQSAWFYHRWLLGR-----AEPHDVLCCVHVSREEACLSVCFSRPLTVG 268 (567)
T ss_dssp HCSSCSHHHHHHHHHHSC-----CCCCSCEEEEEEETTTTEEEEEEEEEECTT
T ss_pred hCCCCccHHHHHHHHHhc-----CCCccceeeeeeccCCceEEEEeccceecc
Confidence 999999999999988877 666555 666777775443
No 131
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.67 E-value=2.9e-16 Score=97.75 Aligned_cols=101 Identities=20% Similarity=0.302 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 70 ELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 70 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
+.....+..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..++++++.+|.++.++..+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhhhcccC
Q 044796 150 KLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 150 ~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
++.. .|++++|+..|++++..
T Consensus 93 ~~~~-----~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 93 ALEA-----MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHH-----TTCHHHHHHHHHHHHHH
T ss_pred HHHH-----HhhHHHHHHHHHHHHHh
Confidence 9998 99999999999988643
No 132
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.67 E-value=4.4e-16 Score=104.05 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=96.5
Q ss_pred CcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH----------------HHHHHHHHHHHHhcCHHHHHH
Q 044796 65 APEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYM----------------KALIRRAEAHEKLEHFEEAIA 128 (186)
Q Consensus 65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~lg~~~~~~g~~~~A~~ 128 (186)
.....+..+..+..+|..+...|+|++|+..|++++...|.++ .++.++|.++..+|++++|+.
T Consensus 30 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 109 (198)
T 2fbn_A 30 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAID 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3334444568899999999999999999999999999999887 899999999999999999999
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 129 DMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 129 ~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
+++++++++|.++.++..+|.++.. +|++++|+..|++++..
T Consensus 110 ~~~~al~~~p~~~~~~~~lg~~~~~-----~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 110 HASKVLKIDKNNVKALYKLGVANMY-----FGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHH-----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHH-----cccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 99999999999998633
No 133
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.67 E-value=3.5e-16 Score=114.49 Aligned_cols=164 Identities=17% Similarity=0.149 Sum_probs=125.3
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCCh----hhhhccchhh-hhcCchhHHHhhCCC------cchhHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPE----RAESASAPEA-KEGQSASEKKEVAPA------PEMAELRS 73 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~ 73 (186)
.+..++..|..++..|++++|+.+|+++++..|.++ .++..+|.+. ..++...+...+... ....+..+
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 456788999999999999999999999999999885 4566677665 444544444332211 11234456
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcC--------------------HHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEH--------------------FEEAI 127 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~--------------------~~~A~ 127 (186)
.++..+|.++...|++++|+..+++++.+.|.. ..++..+|.++...|+ +++|+
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~ 167 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAV 167 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHH
Confidence 888899999999999999999999999886654 4588889999999999 99999
Q ss_pred HHHHHHHhc------CCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 128 ADMKKILEF------DPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 128 ~~~~~al~~------~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
..+.+++.+ .|....++..+|.++.. .|++++|+..|++++
T Consensus 168 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~al 214 (406)
T 3sf4_A 168 DFYEENLSLVTALGDRAAQGRAFGNLGNTHYL-----LGNFRDAVIAHEQRL 214 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----HTBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH-----ccCHHHHHHHHHHHH
Confidence 999998876 33345567777777777 888888888888774
No 134
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.67 E-value=6e-16 Score=109.47 Aligned_cols=165 Identities=14% Similarity=0.029 Sum_probs=123.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhh------hhccchhhh-hcCchhH----HHhhCCCcc--hhH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERA------ESASAPEAK-EGQSASE----KKEVAPAPE--MAE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~~-~~~~~~~----~~~~~~~~~--~~~ 70 (186)
+....+...+..++..|++++|+..+++++...+..+.. +..+|.... .++.+.+ .+++..... ...
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 152 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY 152 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTT
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHH
Confidence 456677788888999999999999999999988877663 223454442 2233332 233332111 111
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhc-------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALEL-------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN--- 140 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--- 140 (186)
....++..+|.++..+|++++|+.+|+++++. .+....+++++|.++..+|++++|+.++++++++.+..
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 23468999999999999999999999999952 33446689999999999999999999999999986544
Q ss_pred ---hHHHHHHHHHHHHHHHHhhcc-ccccchhhhhcc
Q 044796 141 ---NQAKRTILRKLKEMGNSILGR-FGMSTDNFKAVK 173 (186)
Q Consensus 141 ---~~~~~~l~~~~~~~~~~~~~~-~~~A~~~~~~~~ 173 (186)
+.++..+|.++.. +|+ +++|+++|++++
T Consensus 233 ~~~~~~~~~lg~~~~~-----~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRK-----LEYEEAEIEDAYKKAS 264 (293)
T ss_dssp TTHHHHHHHHHHHHHH-----TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----hCCcHHHHHHHHHHHH
Confidence 6788889988888 774 588888887774
No 135
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.67 E-value=2.4e-15 Score=104.84 Aligned_cols=163 Identities=10% Similarity=0.029 Sum_probs=130.0
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccc-------h----------------------------
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASA-------P---------------------------- 48 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~-------~---------------------------- 48 (186)
++...++..|..+ ..+++..|..+|.+++.++|+..++|..+. .
T Consensus 5 ~~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a 83 (282)
T 4f3v_A 5 DRLASLFESAVSM-LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNA 83 (282)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCC
T ss_pred HHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Confidence 4567788888886 689999999999999999999999998761 0
Q ss_pred ----------------------------hhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHH
Q 044796 49 ----------------------------EAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTKAL 100 (186)
Q Consensus 49 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 100 (186)
+...+..+++...+.......|... ..+.+|.++...++|++|+..++.++
T Consensus 84 ~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~ 162 (282)
T 4f3v_A 84 RIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAG 162 (282)
T ss_dssp EEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGG
T ss_pred hhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 0012334555556655555555566 88889999999999999999999887
Q ss_pred hcC-ccc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CC-ChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 101 ELN-PTY-MKALIRRAEAHEKLEHFEEAIADMKKILEFD--PS-NNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 101 ~~~-p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
... |.. ..+++.+|.++..+|++++|+..|++++.-. |. .+.+++.+|.++.. +|+.++|+..|++++
T Consensus 163 ~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-----lGr~deA~~~l~~a~ 235 (282)
T 4f3v_A 163 KWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-----QGNESAAVALLEWLQ 235 (282)
T ss_dssp GCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred ccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 753 222 4589999999999999999999999998654 55 66789999999999 999999999999885
No 136
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=1.4e-15 Score=94.15 Aligned_cols=102 Identities=23% Similarity=0.285 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 69 AELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 69 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
.+..+..+..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+.+++..+|+++.++..+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 34566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccchhhhhcccC
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
.++.. .|++++|+..|++++..
T Consensus 88 ~~~~~-----~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 88 LALSS-----LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHH-----TTCHHHHHHHHHHHHHH
T ss_pred HHHHH-----hCCHHHHHHHHHHHHhc
Confidence 99998 99999999999988643
No 137
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.67 E-value=8.9e-17 Score=112.04 Aligned_cols=152 Identities=18% Similarity=0.144 Sum_probs=123.7
Q ss_pred HHcccHHHHHHHHHHHHhcc--------CCChhhhhccchhh-hhcCchhHHHhhCCCc--------chhHHHHHHHHHH
Q 044796 17 FAEGKYEEALLQYEVALRVA--------SVPERAESASAPEA-KEGQSASEKKEVAPAP--------EMAELRSICHSNR 79 (186)
Q Consensus 17 ~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 79 (186)
...|++++|+.+|+++++.. |....++..+|.+. ..++...+...+.... ...+..+.++..+
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 45678888888888888742 45566777888776 4455555544433222 2235567899999
Q ss_pred HHHHhhhccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCChHH
Q 044796 80 GICFLKLGKFEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF--------DPSNNQA 143 (186)
Q Consensus 80 a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 143 (186)
|.++...|++++|+..+++++.. +|....++..+|.++...|++++|+..|++++.+ .|....+
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 171 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKT 171 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999999999999999998 5888899999999999999999999999999999 7777888
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 144 KRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+..+|.++.. .|++++|+..|++++
T Consensus 172 ~~~la~~~~~-----~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 172 KNNLASCYLK-----QGKYQDAETLYKEIL 196 (283)
T ss_dssp HHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 9999999988 899999999998775
No 138
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.67 E-value=1.5e-15 Score=106.08 Aligned_cols=160 Identities=14% Similarity=0.117 Sum_probs=97.4
Q ss_pred HHHHHHhHhHHHH----cccHHHHHHHHHHHHhccCCChhhhhccchhhh-----hcCchhHHHhhCCCcchhHHHHHHH
Q 044796 6 ANEAKLEGNKLFA----EGKYEEALLQYEVALRVASVPERAESASAPEAK-----EGQSASEKKEVAPAPEMAELRSICH 76 (186)
Q Consensus 6 a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (186)
+..++.+|.++.. .+++++|+.+|+++++.+ ++.++..+|.++. .++.+.+...+....... .+.++
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~ 149 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGC 149 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHH
Confidence 4556666666666 666666666666666652 5566666665553 233333333222111111 23566
Q ss_pred HHHHHHHhh----hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 77 SNRGICFLK----LGKFEESIKECTKALELNPTYMKALIRRAEAHEK----LEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 77 ~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
..+|.++.. .+++++|+.+++++++.+ ++.+++.+|.++.. .+++++|+.+|+++++.+| +.++..++
T Consensus 150 ~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~ 225 (273)
T 1ouv_A 150 TILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLG 225 (273)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHH
Confidence 667777766 677777777777777653 45677777777777 7777777777777777655 56666666
Q ss_pred HHHHHHHHHhhccccccchhhhhccc
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
.++.. |....+++++|+.+|++++.
T Consensus 226 ~~~~~-g~~~~~~~~~A~~~~~~a~~ 250 (273)
T 1ouv_A 226 AMQYN-GEGVTRNEKQAIENFKKGCK 250 (273)
T ss_dssp HHHHT-TSSSSCCSTTHHHHHHHHHH
T ss_pred HHHHc-CCCcccCHHHHHHHHHHHHH
Confidence 55542 22235677778888877753
No 139
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.66 E-value=1.7e-16 Score=101.04 Aligned_cols=96 Identities=21% Similarity=0.302 Sum_probs=85.0
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHF----------EEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
.+.+.|++|+..++++++++|+++.+|.++|.++..++++ ++|+..|+++++++|++..+++++|.++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999876 599999999999999999999999999999
Q ss_pred HHH------Hhhccccccchhhhhcc--cCCCCc
Q 044796 154 MGN------SILGRFGMSTDNFKAVK--DPNTGA 179 (186)
Q Consensus 154 ~~~------~~~~~~~~A~~~~~~~~--~~~~~~ 179 (186)
+|. ...+++++|+.+|++++ +|+...
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHH
Confidence 763 23579999999999996 555433
No 140
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.66 E-value=2.2e-15 Score=106.88 Aligned_cols=150 Identities=11% Similarity=-0.094 Sum_probs=123.1
Q ss_pred hHHHHHHHhHhHHHHcc--cHHHHHHHHHHHHhccCCChhhhhccchhh----hh----cCchhHHHhhCCCcchhHHHH
Q 044796 4 NEANEAKLEGNKLFAEG--KYEEALLQYEVALRVASVPERAESASAPEA----KE----GQSASEKKEVAPAPEMAELRS 73 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~ 73 (186)
+...+|..+|.++...| ++++++.++.+++..+|++..+|..++.+. .. .........+.......|.+.
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH
Confidence 34577888999998888 999999999999999999999998887666 22 233344433333333444455
Q ss_pred HHHHHHHHHHhhhccHH--HHHHHHHHHHhcCcccHHHHHHHHHHHHHhcC------HHHHHHHHHHHHhcCCCChHHHH
Q 044796 74 ICHSNRGICFLKLGKFE--ESIKECTKALELNPTYMKALIRRAEAHEKLEH------FEEAIADMKKILEFDPSNNQAKR 145 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~--~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~------~~~A~~~~~~al~~~p~~~~~~~ 145 (186)
.+|..++.+....|.++ +++.+++++++.+|.+..+|..++.++...|. ++++++++.+++..+|+|..+|.
T Consensus 145 ~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 145 HVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 99999999999999888 99999999999999999999999999998887 89999999999999999999999
Q ss_pred HHHHHHHH
Q 044796 146 TILRKLKE 153 (186)
Q Consensus 146 ~l~~~~~~ 153 (186)
.++.++..
T Consensus 225 y~~~ll~~ 232 (306)
T 3dra_A 225 YLLGIHER 232 (306)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988877
No 141
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.66 E-value=1.3e-16 Score=117.26 Aligned_cols=164 Identities=15% Similarity=0.114 Sum_probs=126.0
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhc------cCCChhhhhccchhh-hhcCchhHHHhhCCCcch------hHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRV------ASVPERAESASAPEA-KEGQSASEKKEVAPAPEM------AEL 71 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~ 71 (186)
.+..+..+|.++...|++++|+.+|++++.+ .|....++..+|.++ ..++...+...+...... .+.
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 164 (411)
T 4a1s_A 85 LSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLS 164 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHH
Confidence 3567889999999999999999999999988 566667777787776 445554444433322222 344
Q ss_pred HHHHHHHHHHHHhhhcc-----------------HHHHHHHHHHHHhcC------cccHHHHHHHHHHHHHhcCHHHHHH
Q 044796 72 RSICHSNRGICFLKLGK-----------------FEESIKECTKALELN------PTYMKALIRRAEAHEKLEHFEEAIA 128 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~-----------------~~~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~g~~~~A~~ 128 (186)
...++..+|.++...|+ +++|+.++++++.+. +....++..+|.++...|++++|+.
T Consensus 165 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 244 (411)
T 4a1s_A 165 EGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIE 244 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 56788899999999999 999999999988763 3445688899999999999999999
Q ss_pred HHHHHHhcCCCChH------HHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 129 DMKKILEFDPSNNQ------AKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 129 ~~~~al~~~p~~~~------~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
++++++++.|.... ++..++.++.. .|++++|+..|++++
T Consensus 245 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~al 290 (411)
T 4a1s_A 245 HHQERLRIAREFGDRAAERRANSNLGNSHIF-----LGQFEDAAEHYKRTL 290 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-----CcCHHHHHHHHHHHH
Confidence 99999988776544 67777777766 888888888888774
No 142
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.66 E-value=4.2e-16 Score=96.80 Aligned_cols=97 Identities=19% Similarity=0.166 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---hHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYM---KALIRRAEAHEKLEHFEEAIADMKKILEFDPSN---NQAKRTI 147 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l 147 (186)
..++.+|.++...|++++|+..|++++..+|+++ .+++.+|.++...|++++|+..|++++..+|++ +.++..+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4567899999999999999999999999999988 899999999999999999999999999999999 8889999
Q ss_pred HHHHHHHHHHhhccccccchhhhhcccC
Q 044796 148 LRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 148 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
|.++.. .|++++|+..|++++..
T Consensus 83 a~~~~~-----~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 83 GLSQYG-----EGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHH-----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHH-----cCCHHHHHHHHHHHHHH
Confidence 999998 99999999999988633
No 143
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.65 E-value=4.4e-16 Score=110.82 Aligned_cols=164 Identities=17% Similarity=0.151 Sum_probs=122.2
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCCh----hhhhccchhh-hhcCchhHHHhhCCCc------chhHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPE----RAESASAPEA-KEGQSASEKKEVAPAP------EMAELRS 73 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~ 73 (186)
.+..++..|..++..|++++|+.+|+++++..|.++ .++..+|... ..++.+.+...+.... ...+...
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 356788899999999999999999999999999985 4556667665 4445444443322211 1234456
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcC--------------------HHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEH--------------------FEEAI 127 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~--------------------~~~A~ 127 (186)
.++..+|.++...|++++|+..++++++..|.. ..++..+|.++...|+ +++|+
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~ 163 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAV 163 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHH
Confidence 788889999999999999999999998875543 4488888999999999 89999
Q ss_pred HHHHHHHhc------CCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 128 ADMKKILEF------DPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 128 ~~~~~al~~------~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
..+++++.+ .|....++..++.++.. .|++++|+..+++++
T Consensus 164 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~A~~~~~~a~ 210 (338)
T 3ro2_A 164 DLYEENLSLVTALGDRAAQGRAFGNLGNTHYL-----LGNFRDAVIAHEQRL 210 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHH
Confidence 998888876 23334566777777666 788888888887764
No 144
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.65 E-value=2.7e-15 Score=106.13 Aligned_cols=165 Identities=15% Similarity=0.035 Sum_probs=126.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhh------hhccchhh-hhcCchhHH----HhhCCCcch--hH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERA------ESASAPEA-KEGQSASEK----KEVAPAPEM--AE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~-~~~~~~~~~----~~~~~~~~~--~~ 70 (186)
.....+...+..++..|++++|+..+.++++..|..... +..+|... ..++.+.+. +++...+.. ..
T Consensus 73 ~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 152 (293)
T 2qfc_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY 152 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTT
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchH
Confidence 556788889999999999999999999999998876643 33444444 223443333 334332222 11
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHH---hcCccc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC----
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKAL---ELNPTY----MKALIRRAEAHEKLEHFEEAIADMKKILEFDPS---- 139 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---- 139 (186)
....++..+|.++...|++++|+.++++++ +..|++ ..+++++|.++..+|++++|+.++++++++.+.
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 235789999999999999999999999999 445543 268999999999999999999999999987643
Q ss_pred --ChHHHHHHHHHHHHHHHHhhcccccc-chhhhhcc
Q 044796 140 --NNQAKRTILRKLKEMGNSILGRFGMS-TDNFKAVK 173 (186)
Q Consensus 140 --~~~~~~~l~~~~~~~~~~~~~~~~~A-~~~~~~~~ 173 (186)
...++..+|.++.. +|++++| ..+|++++
T Consensus 233 ~~~~~~~~~lg~~y~~-----~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRK-----LEYEEAEIEDAYKKAS 264 (293)
T ss_dssp SSHHHHHHHHHHHHHH-----TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHH
Confidence 26778888888888 8999999 67787764
No 145
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.65 E-value=3.3e-16 Score=111.51 Aligned_cols=164 Identities=18% Similarity=0.135 Sum_probs=116.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChh------hhhccchhh-hhcC--------------------chh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPER------AESASAPEA-KEGQ--------------------SAS 57 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~~~~~~-~~~~--------------------~~~ 57 (186)
.+..+..+|.++...|++++|+.++.+++++.|.... ++..+|.+. ..++ .+.
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 161 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQA 161 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHH
Confidence 4667788888888888899999888888887765433 555556554 2333 222
Q ss_pred HHHhhCCCc------chhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHH
Q 044796 58 EKKEVAPAP------EMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEE 125 (186)
Q Consensus 58 ~~~~~~~~~------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~ 125 (186)
+...+.... ...+..+.++..+|.++...|++++|+..+++++.+.|.. ..++..+|.++...|++++
T Consensus 162 A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 241 (338)
T 3ro2_A 162 AVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFET 241 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHH
Confidence 222221111 1123345678888999999999999999999988875543 3378888999999999999
Q ss_pred HHHHHHHHHhcCCCC------hHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 126 AIADMKKILEFDPSN------NQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 126 A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
|+..+++++.+.|.. ..++..++.++.. .|++++|+..+++++
T Consensus 242 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-----~g~~~~A~~~~~~a~ 290 (338)
T 3ro2_A 242 ASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL-----LQDYEKAIDYHLKHL 290 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHH
Confidence 999999988876655 5566777777777 888888888887764
No 146
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.65 E-value=1.7e-15 Score=110.78 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcC-------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 044796 69 AELRSICHSNRGICFLKLGKFEESIKECTKALELN-------PTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN 141 (186)
Q Consensus 69 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 141 (186)
.+..+.++..+|.++..+|++++|+.++++++.+. |....++..+|.++..+|++++|+.+|++++++.|...
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 33467899999999999999999999999999983 33456899999999999999999999999999866543
Q ss_pred ------HHHHHHHHHHHHHHHHhhccccccchhhhhccc
Q 044796 142 ------QAKRTILRKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 142 ------~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
.++.++|.++.. .|++++|+.+|++++.
T Consensus 219 ~~~~~~~~~~~lg~~y~~-----~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNS-----QSQYEDAIPYFKRAIA 252 (383)
T ss_dssp CHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH-----CCCHHHHHHHHHHHHH
Confidence 477888888877 9999999999998864
No 147
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.65 E-value=6.3e-16 Score=118.44 Aligned_cols=164 Identities=12% Similarity=0.003 Sum_probs=132.9
Q ss_pred HHHHccc-HHHHHHHHHHHHhccCCChhhhhccchhhh-hcC----------chhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 15 KLFAEGK-YEEALLQYEVALRVASVPERAESASAPEAK-EGQ----------SASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 15 ~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.....|+ .++|+..+.+++..+|++..+|..++.+.. .+. .+++...+.......|.+..+|..++.+
T Consensus 37 ~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~ 116 (567)
T 1dce_A 37 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 116 (567)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3344554 468899999999999999999999887762 222 3334333333333444455999999999
Q ss_pred Hhhhc--cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH--
Q 044796 83 FLKLG--KFEESIKECTKALELNPTYMKALIRRAEAHEKLE-HFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS-- 157 (186)
Q Consensus 83 ~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-- 157 (186)
....+ ++++++.+++++++.+|.+..+|..++.++...| .++++++++.++++.+|.+..+|..++.++..++..
T Consensus 117 l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~ 196 (567)
T 1dce_A 117 LSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPD 196 (567)
T ss_dssp HHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCC
T ss_pred HHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccc
Confidence 99999 7799999999999999999999999999999999 999999999999999999999999999999885322
Q ss_pred -------hhccccccchhhhhcc--cCCCC
Q 044796 158 -------ILGRFGMSTDNFKAVK--DPNTG 178 (186)
Q Consensus 158 -------~~~~~~~A~~~~~~~~--~~~~~ 178 (186)
..+.++++++++.+++ +|++.
T Consensus 197 ~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 197 SGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp SSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred ccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 1367889999998885 66543
No 148
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.65 E-value=9.1e-16 Score=108.83 Aligned_cols=164 Identities=12% Similarity=-0.047 Sum_probs=129.3
Q ss_pred HhHHHHcccH-HHHHHHHHHHHhccCCChhhhhccchhhhh-c--CchhHHHhhCCCcchhHHHHHHHHHHHHHH----h
Q 044796 13 GNKLFAEGKY-EEALLQYEVALRVASVPERAESASAPEAKE-G--QSASEKKEVAPAPEMAELRSICHSNRGICF----L 84 (186)
Q Consensus 13 g~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~----~ 84 (186)
-......|.+ ++|+.++.++|.++|++..+|...+.+... + ...+....+.......|.+..+|..++.+. .
T Consensus 39 ~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~ 118 (306)
T 3dra_A 39 LLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIME 118 (306)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHH
Confidence 3344555554 799999999999999999999999887733 3 344444433333333333449999999998 6
Q ss_pred hh---ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHH--HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH-h
Q 044796 85 KL---GKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFE--EAIADMKKILEFDPSNNQAKRTILRKLKEMGNS-I 158 (186)
Q Consensus 85 ~~---~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-~ 158 (186)
.. +++++++.+++++++.+|.+..+|..++.++..+|.++ +++..+.++++.+|.|..+|...+.++..++.. .
T Consensus 119 ~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~ 198 (306)
T 3dra_A 119 LNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLAT 198 (306)
T ss_dssp HTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCC
T ss_pred hccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccch
Confidence 66 78999999999999999999999999999999999998 999999999999999999999999988884321 0
Q ss_pred hccccccchhhhhcccCC
Q 044796 159 LGRFGMSTDNFKAVKDPN 176 (186)
Q Consensus 159 ~~~~~~A~~~~~~~~~~~ 176 (186)
...++++++++.+++..+
T Consensus 199 ~~~~~eEl~~~~~aI~~~ 216 (306)
T 3dra_A 199 DNTIDEELNYVKDKIVKC 216 (306)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHhC
Confidence 112788888888876333
No 149
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.64 E-value=3.1e-15 Score=99.76 Aligned_cols=138 Identities=11% Similarity=0.084 Sum_probs=111.8
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..+..+|.++...|++++|+.++++++.+.... ...+....++..+|.++
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---------------------------~~~~~~~~~~~~l~~~~ 76 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS---------------------------GDHTAEHRALHQVGMVE 76 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT---------------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc---------------------------CCcHHHHHHHHHHHHHH
Confidence 357788999999999999999999999999875541 11233458899999999
Q ss_pred hhhccHHHHHHHHHHHHhc------Cc-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--h----HHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALEL------NP-TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN--N----QAKRTILRK 150 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~------~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~----~~~~~l~~~ 150 (186)
...|++++|+..+++++.+ +| ....++..+|.++..+|++++|+..+++++.+.+.. + .++..++.+
T Consensus 77 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 156 (203)
T 3gw4_A 77 RMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDL 156 (203)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 9999999999999999988 33 346679999999999999999999999999764322 1 234666666
Q ss_pred HHHHHHHhhccccccchhhhhcc
Q 044796 151 LKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+.. .|++++|+..+++++
T Consensus 157 ~~~-----~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 157 AQQ-----EKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHH-----TTCHHHHHHHHHHHH
T ss_pred HHH-----CcCHHHHHHHHHHHH
Confidence 666 899999999998774
No 150
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=2e-15 Score=95.66 Aligned_cols=100 Identities=23% Similarity=0.275 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTY---MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
....+..+|..+...|++++|+..|+++++.+|++ ..++..+|.++...|++++|+..+++++.++|+++.++..++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 45889999999999999999999999999999988 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccchhhhhcccCC
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAVKDPN 176 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 176 (186)
.++.. .|++++|+..|++++..+
T Consensus 107 ~~~~~-----~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 107 QALEK-----LGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHH-----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHH-----cCCHHHHHHHHHHHHHcC
Confidence 99998 999999999999886433
No 151
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.64 E-value=1.5e-15 Score=108.52 Aligned_cols=163 Identities=11% Similarity=0.014 Sum_probs=129.8
Q ss_pred HHHHcccHH-HHHHHHHHHHhccCCChhhhhccchhhhh-cC----------chhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 15 KLFAEGKYE-EALLQYEVALRVASVPERAESASAPEAKE-GQ----------SASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 15 ~~~~~~~~~-~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.....|.+. +|+.++.+++.++|++..+|...+.+... +. .......+.......|.+..+|..++.+
T Consensus 38 ~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wl 117 (331)
T 3dss_A 38 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 117 (331)
T ss_dssp HHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 334566665 89999999999999999999988876632 11 1222332222233334455999999999
Q ss_pred Hhhhcc--HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH--
Q 044796 83 FLKLGK--FEESIKECTKALELNPTYMKALIRRAEAHEKLEH-FEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS-- 157 (186)
Q Consensus 83 ~~~~~~--~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-- 157 (186)
....++ +++++.+++++++.+|.+..+|..++.++...|. +++++.++.++++.+|.|..+|..++.++..+...
T Consensus 118 L~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~ 197 (331)
T 3dss_A 118 LSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPD 197 (331)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC-
T ss_pred HhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccc
Confidence 999984 8999999999999999999999999999999999 69999999999999999999999999999885211
Q ss_pred -------hhccccccchhhhhcc--cCCC
Q 044796 158 -------ILGRFGMSTDNFKAVK--DPNT 177 (186)
Q Consensus 158 -------~~~~~~~A~~~~~~~~--~~~~ 177 (186)
..+.++++++++..++ +|++
T Consensus 198 ~~~~~~~~~~~~~eEle~~~~ai~~~P~d 226 (331)
T 3dss_A 198 SGPQGRLPENVLLKELELVQNAFFTDPND 226 (331)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHSTTC
T ss_pred cccccccchHHHHHHHHHHHHHHHhCCCC
Confidence 1266888999998886 5554
No 152
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.64 E-value=3.5e-15 Score=96.33 Aligned_cols=100 Identities=21% Similarity=0.254 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRK 150 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 150 (186)
..+..+..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+.+++.++|.++.++..+|.+
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~ 90 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccchhhhhcccC
Q 044796 151 LKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
+.. .|++++|+..|++++..
T Consensus 91 ~~~-----~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 91 NMA-----LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHH-----TTCHHHHHHHHHHHHHH
T ss_pred HHH-----hccHHHHHHHHHHHHHh
Confidence 998 99999999999988643
No 153
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.63 E-value=8.8e-15 Score=85.20 Aligned_cols=82 Identities=32% Similarity=0.445 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
.+..+..+|.++...|++++|+..+++++..+|+++.+++.+|.++...|++++|+..|+++++++|+++.++..++.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HH
Q 044796 152 KE 153 (186)
Q Consensus 152 ~~ 153 (186)
..
T Consensus 88 ~~ 89 (91)
T 1na3_A 88 QK 89 (91)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 154
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.63 E-value=1.2e-14 Score=88.62 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcC
Q 044796 24 EALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTKALELN 103 (186)
Q Consensus 24 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 103 (186)
+|+..|+++++.+|+ ++.++..+|.++...|++++|+..|++++..+
T Consensus 3 ~a~~~~~~al~~~p~---------------------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 49 (115)
T 2kat_A 3 AITERLEAMLAQGTD---------------------------------NMLLRFTLGKTYAEHEQFDAALPHLRAALDFD 49 (115)
T ss_dssp CHHHHHHHHHTTTCC---------------------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCC---------------------------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 578899999999998 23789999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHH
Q 044796 104 PTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS--NNQAKRTILRKLKEMGN 156 (186)
Q Consensus 104 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~~~ 156 (186)
|+++.+++.+|.++...|++++|+..|++++.+.|. +......+...+..++.
T Consensus 50 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 50 PTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999885 44556666666666544
No 155
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.63 E-value=2.7e-16 Score=95.10 Aligned_cols=96 Identities=23% Similarity=0.429 Sum_probs=87.8
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..++.++.+|.+++..|++++|+.+|+++++.+|.+ +.++.++|.++
T Consensus 2 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------------------------~~~~~~lg~~~ 48 (111)
T 2l6j_A 2 SQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN---------------------------------PVGYSNKAMAL 48 (111)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHH
Confidence 467899999999999999999999999999999992 37899999999
Q ss_pred hhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 044796 84 LKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKK 132 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (186)
..+|++++|+..+++++.++|++ ..+++.+|.++..+|+++.|+..+++
T Consensus 49 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 49 IKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 99999999999999999999998 89999999999999988877766544
No 156
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.62 E-value=2.1e-14 Score=89.05 Aligned_cols=103 Identities=32% Similarity=0.459 Sum_probs=95.3
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.+..+..+|.++...|++++|+.++++++...|.+ +..+..+|.++.
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------~~~~~~l~~~~~ 80 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------------------------AEAWYNLGNAYY 80 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------------------------hHHHHHHHHHHH
Confidence 35678889999999999999999999999998882 267888999999
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN 140 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 140 (186)
..|++++|+..+++++...|.++.++..+|.++...|++++|...+++++..+|++
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999999999999999999999863
No 157
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.62 E-value=8.7e-16 Score=100.78 Aligned_cols=127 Identities=12% Similarity=0.041 Sum_probs=103.9
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh--hhcC----chhHHHhhCCCcchhHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA--KEGQ----SASEKKEVAPAPEMAELRSICHS 77 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 77 (186)
+.+..++.+|.++...|++++|+..|++++..+| ++..+...+.+. .... .....+++...| .++.+++
T Consensus 38 ~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P----~~~~~~~ 112 (176)
T 2r5s_A 38 SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANP----DNFELAC 112 (176)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHST----TCHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCC----CCHHHHH
Confidence 3567899999999999999999999999999999 776665544332 1111 233334444444 3459999
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHhcCccc--HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 78 NRGICFLKLGKFEESIKECTKALELNPTY--MKALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 78 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
.+|.++...|++++|+..|+++++.+|+. +.++..+|.++..+|+.++|+..|++++.
T Consensus 113 ~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 113 ELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999976 66999999999999999999999999875
No 158
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.62 E-value=1.7e-15 Score=115.29 Aligned_cols=162 Identities=13% Similarity=-0.089 Sum_probs=133.1
Q ss_pred HHHHHHHhHhHHHH-------cccHH-------HHHHHHHHHHh-ccCCChhhhhccchhh-hhcCchhHHH----hhCC
Q 044796 5 EANEAKLEGNKLFA-------EGKYE-------EALLQYEVALR-VASVPERAESASAPEA-KEGQSASEKK----EVAP 64 (186)
Q Consensus 5 ~a~~~~~~g~~~~~-------~~~~~-------~A~~~~~~al~-~~p~~~~~~~~~~~~~-~~~~~~~~~~----~~~~ 64 (186)
.++.|...|..+.. .|+++ +|+..|+++++ ..|++...|..++... ..++.+.+.. ++..
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~ 350 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI 350 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc
Confidence 46778888888875 68876 99999999997 8999999999998876 4444444443 3444
Q ss_pred CcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHH-HHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 65 APEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEA-HEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
.|... ..+|..+|.++...|++++|+..|+++++..|.....+...+.+ +...|++++|...|+++++..|+++.+
T Consensus 351 ~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~ 427 (530)
T 2ooe_A 351 EDIDP---TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEY 427 (530)
T ss_dssp SSSCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccCc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHH
Confidence 33321 25899999999999999999999999999988877777776665 446899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhhhccc
Q 044796 144 KRTILRKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
|..++..+.. .|+++.|...|++++.
T Consensus 428 ~~~~~~~~~~-----~g~~~~Ar~~~~~al~ 453 (530)
T 2ooe_A 428 VLAYIDYLSH-----LNEDNNTRVLFERVLT 453 (530)
T ss_dssp HHHHHHHHTT-----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----CCCHhhHHHHHHHHHh
Confidence 9999988887 8999999999999864
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.62 E-value=5.2e-14 Score=99.50 Aligned_cols=96 Identities=18% Similarity=0.043 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCCCh--
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKKIL---EFDPSNN-- 141 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al---~~~p~~~-- 141 (186)
...+..+|.++...|++++|+..+++++...+.. ..++..+|.++..+|++++|+.+|++++ +..|++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 3556779999999999999999999999865433 5689999999999999999999999999 5566643
Q ss_pred --HHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 142 --QAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 142 --~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.++.++|.++.. +|++++|+.++++++
T Consensus 195 ~~~~~~nlg~~y~~-----~~~y~~Al~~~~kal 223 (293)
T 2qfc_A 195 DVKVRYNHAKALYL-----DSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHH-----HhhHHHHHHHHHHHH
Confidence 578888988888 999999999999885
No 160
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.62 E-value=2.4e-15 Score=93.13 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------hHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN-------NQAK 144 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-------~~~~ 144 (186)
.+..+..+|.++...|++++|+..+++++..+|.++.++..+|.++...|++++|+..+++++...|.+ +.++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999999999999999887 8888
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhccc
Q 044796 145 RTILRKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 145 ~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
..+|.++.. .|++++|+..|++++.
T Consensus 83 ~~la~~~~~-----~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 83 ARIGNSYFK-----EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHH-----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-----hccHHHHHHHHHHHHH
Confidence 899988888 9999999999998864
No 161
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.61 E-value=8.7e-15 Score=89.76 Aligned_cols=98 Identities=27% Similarity=0.383 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLK 152 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 152 (186)
+..+..+|.++...|++++|+..+++++..+|+++.++..+|.++...|++++|+..+++++..+|.++.++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhccccccchhhhhcccC
Q 044796 153 EMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 153 ~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
. .|++++|+..|++++..
T Consensus 89 ~-----~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 89 K-----QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp H-----TTCHHHHHHHHHHHHHH
T ss_pred H-----hcCHHHHHHHHHHHHHh
Confidence 8 99999999999988543
No 162
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.61 E-value=1.5e-14 Score=105.75 Aligned_cols=108 Identities=16% Similarity=0.081 Sum_probs=91.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..+..+|.++...|++++|+.+|.+++++.+... .....+.++.++|.++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~---------------------------~~~~~~~~~~~lg~~y 232 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ---------------------------NDRFIAISLLNIANSY 232 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------------------------CHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC---------------------------CHHHHHHHHHHHHHHH
Confidence 4577889999999999999999999999999865411 1112447888999999
Q ss_pred hhhccHHHHHHHHHHHHh-----cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 044796 84 LKLGKFEESIKECTKALE-----LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDP 138 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 138 (186)
..+|++++|+.++++++. .+|..+.++..+|.++..+|++++|+.++++++++.+
T Consensus 233 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 233 DRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998 7888888999999999999999999999999998754
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.61 E-value=2.7e-15 Score=106.86 Aligned_cols=152 Identities=16% Similarity=0.156 Sum_probs=111.3
Q ss_pred hhHHHHHHHhHhHHHH------cccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHH----HhhCCCcc--hhH
Q 044796 3 LNEANEAKLEGNKLFA------EGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEK----KEVAPAPE--MAE 70 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~------~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~ 70 (186)
...+..++..|..... .+++++|+.+|.++..... ..++...+. +++...+. ...
T Consensus 7 ~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~-------------~~g~~~~A~~~~~~al~~~~~~~~~~ 73 (307)
T 2ifu_A 7 ISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFK-------------NAKQLEQAKDAYLQEAEAHANNRSLF 73 (307)
T ss_dssp HHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHH-------------HTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHH-------------HcCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 4556667776665432 5899999999999854321 111111111 11111111 112
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPT------YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN---- 140 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---- 140 (186)
....++..+|.++..+|++++|+.+|++++.+.+. ...++.++|.++.. |++++|+.+|++++.+.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 23578999999999999999999999999988432 25688999999999 99999999999999998754
Q ss_pred --hHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 141 --NQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 141 --~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
..++..+|.++.. +|++++|+.+|++++
T Consensus 153 ~~~~~~~~lg~~~~~-----~g~~~~A~~~~~~al 182 (307)
T 2ifu_A 153 QAAELIGKASRLLVR-----QQKFDEAAASLQKEK 182 (307)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 4667788888877 999999999999885
No 164
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.61 E-value=4.7e-15 Score=105.93 Aligned_cols=174 Identities=14% Similarity=-0.015 Sum_probs=136.5
Q ss_pred hHHHHHHHhHhHHHHccc----------HHHHHHHHHHHHhccCCChhhhhccchhhhhcC---chhHHHhhCCCcchhH
Q 044796 4 NEANEAKLEGNKLFAEGK----------YEEALLQYEVALRVASVPERAESASAPEAKEGQ---SASEKKEVAPAPEMAE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 70 (186)
+...+|..++.+....+. +++++.++..++..+|++..+|...+.+..... .......+.......|
T Consensus 62 ~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dp 141 (331)
T 3dss_A 62 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE 141 (331)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCC
Confidence 345678888888877665 789999999999999999999999887774322 2344443333334444
Q ss_pred HHHHHHHHHHHHHhhhcc-HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHh--------------cCHHHHHHHHHHHHh
Q 044796 71 LRSICHSNRGICFLKLGK-FEESIKECTKALELNPTYMKALIRRAEAHEKL--------------EHFEEAIADMKKILE 135 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------------g~~~~A~~~~~~al~ 135 (186)
.+..+|..++.+....|. +++++.+++++++.+|.+..+|..++.++..+ +.++++++++.+++.
T Consensus 142 rNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 142 RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 555999999999999998 69999999999999999999999999999888 568999999999999
Q ss_pred cCCCChHHHHHHHHHHHHH-HH-----HhhccccccchhhhhcccCCC
Q 044796 136 FDPSNNQAKRTILRKLKEM-GN-----SILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 136 ~~p~~~~~~~~l~~~~~~~-~~-----~~~~~~~~A~~~~~~~~~~~~ 177 (186)
.+|+|..+|+.+..++... |. ...+.++++++.++.+++.+|
T Consensus 222 ~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~p 269 (331)
T 3dss_A 222 TDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEP 269 (331)
T ss_dssp HSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred hCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999998666555442 21 113567788888887753333
No 165
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.61 E-value=3.5e-16 Score=95.96 Aligned_cols=85 Identities=14% Similarity=0.164 Sum_probs=76.8
Q ss_pred hhccHHHHHHHHHHHHhc---CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcc
Q 044796 85 KLGKFEESIKECTKALEL---NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 161 (186)
.+|++++|+..|+++++. +|+++.++..+|.++..+|++++|+..|+++++++|+++.++..+|.++.. .|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-----~g~ 76 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-----LGR 76 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----HTC
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-----cCC
Confidence 468999999999999999 699999999999999999999999999999999999999999999999999 999
Q ss_pred ccccchhhhhccc
Q 044796 162 FGMSTDNFKAVKD 174 (186)
Q Consensus 162 ~~~A~~~~~~~~~ 174 (186)
+++|+..|++++.
T Consensus 77 ~~~A~~~~~~al~ 89 (117)
T 3k9i_A 77 YEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998863
No 166
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.60 E-value=5.1e-15 Score=104.23 Aligned_cols=96 Identities=20% Similarity=0.195 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLK 152 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 152 (186)
+..+..+|..+...|++++|+..|++++..+|+++.+++++|.++..+|++++|+..++++++++|+++.++..+|.++.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccchhhhhcc
Q 044796 153 EMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 153 ~~~~~~~~~~~~A~~~~~~~~ 173 (186)
. +|++++|+..|++++
T Consensus 84 ~-----~g~~~~A~~~~~~al 99 (281)
T 2c2l_A 84 E-----MESYDEAIANLQRAY 99 (281)
T ss_dssp H-----TTCHHHHHHHHHHHH
T ss_pred H-----cCCHHHHHHHHHHHH
Confidence 9 999999999999885
No 167
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.57 E-value=1e-14 Score=105.23 Aligned_cols=106 Identities=20% Similarity=0.208 Sum_probs=95.3
Q ss_pred chhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH-----------------HHHHHHHHHHHHhcCHHHHHHH
Q 044796 67 EMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYM-----------------KALIRRAEAHEKLEHFEEAIAD 129 (186)
Q Consensus 67 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----------------~~~~~lg~~~~~~g~~~~A~~~ 129 (186)
...+..+..+..+|..++..|+|++|+..|++++...|++. .+++++|.++..+|++++|+..
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33444668899999999999999999999999999999887 4899999999999999999999
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 130 MKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 130 ~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
|+++++++|++..+++++|.++.. +|++++|+..|++++..++
T Consensus 253 ~~~al~~~p~~~~a~~~lg~a~~~-----~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 253 CNIVLTEEEKNPKALFRRGKAKAE-----LGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHT-----TTCHHHHHHHHHHTTC---
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHHCC
Confidence 999999999999999999999988 9999999999999964443
No 168
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.56 E-value=5.9e-15 Score=105.90 Aligned_cols=161 Identities=11% Similarity=-0.056 Sum_probs=128.7
Q ss_pred HhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcC--chhHHH----hhCCCcchhHHHHHHHHHHHHHHhhh
Q 044796 13 GNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQ--SASEKK----EVAPAPEMAELRSICHSNRGICFLKL 86 (186)
Q Consensus 13 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~~~~ 86 (186)
.......+..++|+.++.++|.++|++..+|..++.+..... .+.... .+...|.. ..+|..++.+....
T Consensus 61 r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn----y~aW~hR~wlL~~l 136 (349)
T 3q7a_A 61 RAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKS----YQVWHHRLLLLDRI 136 (349)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC----HHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHHh
Confidence 334445556789999999999999999999999887763322 334333 34445544 49999999999988
Q ss_pred -c-cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHH--------HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 044796 87 -G-KFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFE--------EAIADMKKILEFDPSNNQAKRTILRKLKEMGN 156 (186)
Q Consensus 87 -~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--------~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 156 (186)
+ ++++++.+++++++.+|.+..+|..++.++...|.++ +++..+.++++.+|.|..+|...+.++..++.
T Consensus 137 ~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 137 SPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp CCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred cCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 7 8999999999999999999999999999999999888 99999999999999999999999998887432
Q ss_pred H--hhccccccchhhhhcc--cCCC
Q 044796 157 S--ILGRFGMSTDNFKAVK--DPNT 177 (186)
Q Consensus 157 ~--~~~~~~~A~~~~~~~~--~~~~ 177 (186)
. ....++++++++++++ +|++
T Consensus 217 ~~~~~~~~~eELe~~~~aI~~~P~n 241 (349)
T 3q7a_A 217 AETSSRSLQDELIYILKSIHLIPHN 241 (349)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred cccchHHHHHHHHHHHHHHHhCCCC
Confidence 1 1112577888887775 5543
No 169
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.55 E-value=5.1e-14 Score=105.37 Aligned_cols=160 Identities=11% Similarity=-0.022 Sum_probs=130.4
Q ss_pred HHHHHhHhHHHHcc---cHHHHHHHHHHHHhccCCChhhhhccchhhhhc-----CchhHHHhhCCCcchhHHHHHHHHH
Q 044796 7 NEAKLEGNKLFAEG---KYEEALLQYEVALRVASVPERAESASAPEAKEG-----QSASEKKEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 7 ~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
.+++.+|.++...| ++++|+.+|+++.+..|.....++.+|.++..+ +...+...+.... +.++.+++.
T Consensus 177 ~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~ 253 (452)
T 3e4b_A 177 ICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVS 253 (452)
T ss_dssp THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHH
T ss_pred HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHH
Confidence 46788999999999 999999999999999999988888888877443 3334443333222 445689999
Q ss_pred HHHH-H--hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 044796 79 RGIC-F--LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLE-----HFEEAIADMKKILEFDPSNNQAKRTILRK 150 (186)
Q Consensus 79 ~a~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 150 (186)
+|.+ + ...+++++|+.+|+++.+. .++.+++.+|.++. .| ++++|+.+|+++. |.++.+.+.+|.+
T Consensus 254 Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~ 327 (452)
T 3e4b_A 254 LAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQI 327 (452)
T ss_dssp HHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHH
Confidence 9998 4 5789999999999999965 48999999999998 66 9999999999999 8999999999977
Q ss_pred HHHHHHHhhccccccchhhhhcccCC
Q 044796 151 LKEMGNSILGRFGMSTDNFKAVKDPN 176 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~~~~~ 176 (186)
+.. |.....++++|+.+|+++.+++
T Consensus 328 y~~-G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 328 YRR-GYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHT-TTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHC-CCCCCcCHHHHHHHHHHHHhhC
Confidence 765 5445668899999999887654
No 170
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.55 E-value=3.5e-14 Score=108.14 Aligned_cols=160 Identities=11% Similarity=-0.028 Sum_probs=124.8
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCCh-hhhhccchhh-hhcCchhHH----HhhCCCcchhHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPE-RAESASAPEA-KEGQSASEK----KEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 78 (186)
.+..|...|..+...|++++|...|+++++..|.++ .+|..++... ..++.+.+. +++...+. ....+..
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~----~~~~~~~ 395 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART----RHHVYVT 395 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC----CTHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC----chHHHHH
Confidence 467888999999999999999999999999999985 5788777654 334443333 34443332 2345555
Q ss_pred HHHH-HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChH----HHHHHHHHHHH
Q 044796 79 RGIC-FLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQ----AKRTILRKLKE 153 (186)
Q Consensus 79 ~a~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~l~~~~~~ 153 (186)
.+.+ +...|++++|...|+++++.+|+++.+|..++.++...|++++|...|++++...|.++. +|.........
T Consensus 396 ~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~ 475 (530)
T 2ooe_A 396 AALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESN 475 (530)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 5544 346899999999999999999999999999999999999999999999999999877665 77777766666
Q ss_pred HHHHhhccccccchhhhhcc
Q 044796 154 MGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 154 ~~~~~~~~~~~A~~~~~~~~ 173 (186)
.|+.+.+...+++++
T Consensus 476 -----~G~~~~~~~~~~r~~ 490 (530)
T 2ooe_A 476 -----IGDLASILKVEKRRF 490 (530)
T ss_dssp -----SSCHHHHHHHHHHHH
T ss_pred -----cCCHHHHHHHHHHHH
Confidence 666666766666553
No 171
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.55 E-value=1.5e-13 Score=79.84 Aligned_cols=85 Identities=31% Similarity=0.424 Sum_probs=78.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
..+..++.+|.++...|++++|+.+|+++++.+|.+ +.++..+|.++
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------------------------~~~~~~l~~~~ 53 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------------------------AEAWYNLGNAY 53 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------HHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHH
Confidence 357889999999999999999999999999999982 37889999999
Q ss_pred hhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhc
Q 044796 84 LKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLE 121 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 121 (186)
...|++++|+..+++++..+|+++.++..+|.++..+|
T Consensus 54 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 54 YKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999988765
No 172
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.55 E-value=2.7e-14 Score=104.28 Aligned_cols=101 Identities=24% Similarity=0.330 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHh----------------cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALE----------------LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
.+..+..+|..+...|++++|+..|+++++ .+|.++.++.++|.++..+|++++|+.+++++++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999 7888899999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 136 FDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 136 ~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
++|+++.+++.+|.++.. ++++++|+..|++++..++
T Consensus 302 ~~p~~~~a~~~lg~~~~~-----~g~~~eA~~~l~~Al~l~P 338 (370)
T 1ihg_A 302 IDPSNTKALYRRAQGWQG-----LKEYDQALADLKKAQEIAP 338 (370)
T ss_dssp TCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHCT
T ss_pred hCchhHHHHHHHHHHHHH-----ccCHHHHHHHHHHHHHhCC
Confidence 999999999999999999 9999999999999864433
No 173
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.54 E-value=7.2e-14 Score=98.76 Aligned_cols=95 Identities=16% Similarity=0.039 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------CCCC
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIRRAEAHEKLEHFEEAIADMKKILEF-------DPSN 140 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------~p~~ 140 (186)
..+..+|.++...+++++|+.++++++...+.. ..++..+|.++..+|++++|+.+|+++++. .|..
T Consensus 116 ~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (293)
T 3u3w_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHH
Confidence 345568999999999999999999999864432 347999999999999999999999999953 2233
Q ss_pred hHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 141 NQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
..++.++|.++.. +|++++|+.++++++
T Consensus 196 ~~~~~nlg~~y~~-----~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 196 VKVRYNHAKALYL-----DSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HhHHHHHHHHHHHHH
Confidence 4577888888888 999999999999885
No 174
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.54 E-value=1.1e-13 Score=99.32 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=127.6
Q ss_pred hHHHHHHHhHhHHHHcc-cHHHHHHHHHHHHhccCCChhhhhccchhhhhc---CchhHH----HhhCCCcchhHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEG-KYEEALLQYEVALRVASVPERAESASAPEAKEG---QSASEK----KEVAPAPEMAELRSIC 75 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~ 75 (186)
+...+|..++.++...| .+++++..+.+++..+|++..+|..++.+.... ...... +.+...|.+ ..+
T Consensus 86 ~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN----y~A 161 (349)
T 3q7a_A 86 AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN----YHT 161 (349)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC----HHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC----HHH
Confidence 34578899999999999 599999999999999999999999988776432 333333 344555544 499
Q ss_pred HHHHHHHHhhhccHH--------HHHHHHHHHHhcCcccHHHHHHHHHHHHHhcC-------HHHHHHHHHHHHhcCCCC
Q 044796 76 HSNRGICFLKLGKFE--------ESIKECTKALELNPTYMKALIRRAEAHEKLEH-------FEEAIADMKKILEFDPSN 140 (186)
Q Consensus 76 ~~~~a~~~~~~~~~~--------~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-------~~~A~~~~~~al~~~p~~ 140 (186)
|..++.+....+.++ +++.+++++++.+|.+..+|..++.++..+++ ++++++++.+++..+|+|
T Consensus 162 W~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n 241 (349)
T 3q7a_A 162 WAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHN 241 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999888 99999999999999999999999999999987 799999999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q 044796 141 NQAKRTILRKLKEMG 155 (186)
Q Consensus 141 ~~~~~~l~~~~~~~~ 155 (186)
..+|..+..++...|
T Consensus 242 ~SaW~Ylr~Ll~~~~ 256 (349)
T 3q7a_A 242 VSAWNYLRGFLKHFS 256 (349)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999888887744
No 175
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.54 E-value=5.7e-15 Score=104.27 Aligned_cols=135 Identities=8% Similarity=-0.020 Sum_probs=101.3
Q ss_pred cCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHH
Q 044796 36 ASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRA 114 (186)
Q Consensus 36 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 114 (186)
.|++.+.+..+|... ..++.+.+...+.......|.++.++..+|.++...|++++|+..+++++..+|+....+...+
T Consensus 113 lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~ 192 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQ 192 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHH
Confidence 366666676666655 4455555554444433344444577777777777777788887777777777776666666667
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 115 EAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 115 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
..+...++.++|+..|++++..+|+++.++..+|.++.. .|++++|+..|.+++..
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~-----~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQ-----VGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH
T ss_pred HHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHH-----cccHHHHHHHHHHHHhc
Confidence 777777777778888889999999999999999999999 99999999999988643
No 176
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.53 E-value=1.5e-13 Score=95.88 Aligned_cols=142 Identities=15% Similarity=0.041 Sum_probs=118.8
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcch-hHHH-HHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEM-AELR-SICHSNRGI 81 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~a~ 81 (186)
..+.....+..+...|++++|...|..++...|.+. +.+.++.+. ..+...++...+...... .+.. ..+++.+|.
T Consensus 101 r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~ 179 (282)
T 4f3v_A 101 PLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGV 179 (282)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHH
Confidence 456677788999999999999999999999999888 888888776 667777777777644332 2222 368999999
Q ss_pred HHhhhccHHHHHHHHHHHHhcC--cc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 82 CFLKLGKFEESIKECTKALELN--PT-YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
++..+|++++|+.+|++++.-. |. .+.+++.+|.++..+|+.++|...|++++..+|+ +.++..|.
T Consensus 180 al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 180 AAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 9999999999999999999654 55 6789999999999999999999999999999999 77776654
No 177
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.53 E-value=2.1e-13 Score=102.66 Aligned_cols=138 Identities=15% Similarity=0.089 Sum_probs=110.3
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.+......+..+..+|+|++|+..|++++++.... ....++.....+.++|.+|.
T Consensus 308 ~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~-------------------------lg~~Hp~~a~~~~nLa~~y~ 362 (490)
T 3n71_A 308 FSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPV-------------------------FADTNLYVLRLLSIASEVLS 362 (490)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTT-------------------------BCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh-------------------------cCCCCHHHHHHHHHHHHHHH
Confidence 34556667777889999999999999999875541 23344556689999999999
Q ss_pred hhccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCChHH---HHHHH
Q 044796 85 KLGKFEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-----DPSNNQA---KRTIL 148 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~---~~~l~ 148 (186)
.+|+|++|+.++++++.+ +|+-...+.++|.+|..+|++++|+..|++|+.+ .|+.|.+ ...++
T Consensus 363 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~ 442 (490)
T 3n71_A 363 YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRM 442 (490)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 999999999999999976 3555678999999999999999999999999975 5666544 45566
Q ss_pred HHHHHHHHHhhccccccchhhhhc
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
.++.. ++++++|...|.++
T Consensus 443 ~~~~e-----~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 443 QTEME-----LRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHH-----HHHHHHHHHHHHHH
T ss_pred HHHHH-----HHHHHHHHHHHHHH
Confidence 56655 77788888887665
No 178
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.53 E-value=8.7e-15 Score=110.20 Aligned_cols=98 Identities=21% Similarity=0.272 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL 151 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 151 (186)
.+..+..+|.++...|++++|+..|+++++.+|+++.++..+|.++..+|++++|+..++++++++|+++.++..+|.++
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 84 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 84 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhhhccc
Q 044796 152 KEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
.. +|++++|+..|++++.
T Consensus 85 ~~-----~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 85 MA-----LGKFRAALRDYETVVK 102 (477)
T ss_dssp HH-----HTCHHHHHHHHHHHHH
T ss_pred HH-----cCCHHHHHHHHHHHHH
Confidence 99 9999999999999863
No 179
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.51 E-value=2.8e-13 Score=98.54 Aligned_cols=164 Identities=15% Similarity=0.058 Sum_probs=124.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChh-----hhhccchhh-hhcCchhHHHhh----CCCcch--hHHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPER-----AESASAPEA-KEGQSASEKKEV----APAPEM--AELR 72 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----~~~~~~~~~-~~~~~~~~~~~~----~~~~~~--~~~~ 72 (186)
.++.+..+|..++..|++++|+..+++++...|.... ++..+|... ..++.+.+...+ ...+.. ....
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 3567788899999999999999999999998876543 344455444 345544443332 222211 1123
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcC--------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELN--------PTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN---- 140 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---- 140 (186)
..++..+|.++...|++++|+..+++++... |....++..+|.++...|++++|...+++++.+.|..
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 4567889999999999999999999999875 4456778889999999999999999999999988763
Q ss_pred -hHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 141 -NQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 141 -~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
..++..++.++.. .|++++|...+++++
T Consensus 173 ~~~~~~~la~~~~~-----~g~~~~A~~~l~~a~ 201 (373)
T 1hz4_A 173 QLQCLAMLIQCSLA-----RGDLDNARSQLNRLE 201 (373)
T ss_dssp GHHHHHHHHHHHHH-----HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 3456677777777 899999999998774
No 180
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.51 E-value=1.7e-13 Score=81.56 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--hHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN--NQAKRTILR 149 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~l~~ 149 (186)
++.+++.+|.++...|++++|+..|+++++.+|+++.+|+.+|.++..+|++++|+..|++++++.|.. ......+..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~ 85 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQD 85 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999999999999999998754 444445555
Q ss_pred HHHH
Q 044796 150 KLKE 153 (186)
Q Consensus 150 ~~~~ 153 (186)
.+..
T Consensus 86 ~l~~ 89 (100)
T 3ma5_A 86 AKLK 89 (100)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 181
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.51 E-value=3.5e-14 Score=84.13 Aligned_cols=69 Identities=16% Similarity=0.268 Sum_probs=54.9
Q ss_pred HHHHHHHhhhccHHHHHHHHHHHHhcCcccHH-HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHH
Q 044796 77 SNRGICFLKLGKFEESIKECTKALELNPTYMK-ALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKR 145 (186)
Q Consensus 77 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 145 (186)
+.+|.++...|++++|+..++++++.+|+++. +++.+|.++..+|++++|+..|+++++++|+++.++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 73 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQA 73 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 45677777888888888888888888888877 8888888888888888888888888888888877763
No 182
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.45 E-value=2e-12 Score=76.40 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 044796 75 CHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN 140 (186)
Q Consensus 75 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 140 (186)
++..+|.++..+|++++|+..|+++++++|+++.++.. +.+.+++..|++++..+|++
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 55556666666666666666666666666655555432 44455555555555555543
No 183
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.44 E-value=1.2e-12 Score=87.09 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=95.0
Q ss_pred HHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHH
Q 044796 16 LFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKE 95 (186)
Q Consensus 16 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~ 95 (186)
++..|++++|...++.... +|. ..+.++..+|.++...|++++|+..
T Consensus 2 ~~~~g~~~~A~~~~~~~~~-~~~--------------------------------~~~~~~~~l~~~~~~~g~~~~A~~~ 48 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLA-HPA--------------------------------TASGARFMLGYVYAFMDRFDEARAS 48 (203)
T ss_dssp -----CHHHHHHHHHHHHT-STT--------------------------------THHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccHHHHHHHHHHhcC-ChH--------------------------------HHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3568899999995554433 332 1348899999999999999999999
Q ss_pred HHHHHh------cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCC----ChHHHHHHHHHHHHHHHHhhccc
Q 044796 96 CTKALE------LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF---DPS----NNQAKRTILRKLKEMGNSILGRF 162 (186)
Q Consensus 96 ~~~al~------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~----~~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
+++++. ..|....++..+|.++...|++++|+..+++++.+ .|+ ...++..+|.++.. .|++
T Consensus 49 ~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~-----~g~~ 123 (203)
T 3gw4_A 49 FQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALH-----FGDL 123 (203)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH-----HTCH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH-----hCCH
Confidence 999999 55667889999999999999999999999999998 443 24557778877777 8999
Q ss_pred cccchhhhhcc
Q 044796 163 GMSTDNFKAVK 173 (186)
Q Consensus 163 ~~A~~~~~~~~ 173 (186)
++|+..+++++
T Consensus 124 ~~A~~~~~~al 134 (203)
T 3gw4_A 124 AGARQEYEKSL 134 (203)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998775
No 184
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.44 E-value=6e-13 Score=80.99 Aligned_cols=79 Identities=15% Similarity=0.218 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhh
Q 044796 90 EESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNF 169 (186)
Q Consensus 90 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~ 169 (186)
++|+..|+++++.+|+++.+++.+|.++...|++++|+..|++++.++|+++.++..+|.++.. .|++++|+..|
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-----~g~~~~A~~~~ 76 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-----QGDRAGARQAW 76 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----HTCHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-----cCCHHHHHHHH
Confidence 3588999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred hhcc
Q 044796 170 KAVK 173 (186)
Q Consensus 170 ~~~~ 173 (186)
++++
T Consensus 77 ~~al 80 (115)
T 2kat_A 77 ESGL 80 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9885
No 185
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.43 E-value=2.3e-12 Score=97.24 Aligned_cols=160 Identities=15% Similarity=-0.005 Sum_probs=91.2
Q ss_pred HHHHHHHhHhHHHH----cccHHHHHHHHHHHHhccCCChhhhhccchhhhh-----cCchhHHHhhCCCcchhHHHHHH
Q 044796 5 EANEAKLEGNKLFA----EGKYEEALLQYEVALRVASVPERAESASAPEAKE-----GQSASEKKEVAPAPEMAELRSIC 75 (186)
Q Consensus 5 ~a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 75 (186)
.+++++.+|..+.. .+++++|+.+|+++++. .++.+++.+|.++.. ++.+.+...+..... ..++.+
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~--~~~~~a 113 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAAL--KGLPQA 113 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH--TTCHHH
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH--CCCHHH
Confidence 34566677777766 67777777777777664 456666666665532 233333322221111 113456
Q ss_pred HHHHHHHHhh----hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 76 HSNRGICFLK----LGKFEESIKECTKALELNPTYMKALIRRAEAHEK----LEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 76 ~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
++.+|.++.. .+++++|+.+|+++... .++.+++.+|.++.. .+++++|+.+|+++++. .++.++..+
T Consensus 114 ~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~L 189 (490)
T 2xm6_A 114 QQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQL 189 (490)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 6666666666 56667777777766654 356666666666665 56666666666666654 356666666
Q ss_pred HHHHHHHHHHhhccccccchhhhhcc
Q 044796 148 LRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 148 ~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
+.++.. |....+++++|+.+|+++.
T Consensus 190 g~~y~~-g~g~~~~~~~A~~~~~~a~ 214 (490)
T 2xm6_A 190 GYMYSR-GLGVERNDAISAQWYRKSA 214 (490)
T ss_dssp HHHHHH-TSSSCCCHHHHHHHHHHHH
T ss_pred HHHHhc-CCCCCcCHHHHHHHHHHHH
Confidence 655443 1112345555555555443
No 186
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.42 E-value=4e-12 Score=89.76 Aligned_cols=163 Identities=10% Similarity=-0.040 Sum_probs=122.1
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccC--CChhhhhccchhh-hhcCchhHHHhhCCCcchhH------HHHHHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVAS--VPERAESASAPEA-KEGQSASEKKEVAPAPEMAE------LRSICH 76 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~ 76 (186)
...++.+|.++...|++++|+..+.+++..+| .+.++....+.++ ..+..+.+.+.+.......+ ......
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~ 179 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILN 179 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHH
Confidence 34567899999999999999999999999997 7777777777766 66666777766654433333 222333
Q ss_pred HHHHHHHhhhc--cHHHHHHHHHHHHhcCcc--cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------CCCChH
Q 044796 77 SNRGICFLKLG--KFEESIKECTKALELNPT--YMKALIRRAEAHEKLEHFEEAIADMKKILEF----------DPSNNQ 142 (186)
Q Consensus 77 ~~~a~~~~~~~--~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------~p~~~~ 142 (186)
..-|.+.+..| ++.+|...|+++....|+ .+..+++ ++..+|++++|...++.+++. +|+++.
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~ 256 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPT 256 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHH
Confidence 33454566666 899999999999998887 3344444 899999999999999988876 588999
Q ss_pred HHHHHHHHHHHHHHHhhccccccchhhhhcccCCCC
Q 044796 143 AKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
+..++..+... +|+ +|.+++.+++...|+
T Consensus 257 ~LaN~i~l~~~-----lgk--~a~~l~~qL~~~~P~ 285 (310)
T 3mv2_B 257 FLANQITLALM-----QGL--DTEDLTNQLVKLDHE 285 (310)
T ss_dssp HHHHHHHHHHH-----TTC--TTHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHH-----hCh--HHHHHHHHHHHhCCC
Confidence 99888876666 554 778888877544443
No 187
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.41 E-value=4.1e-12 Score=92.37 Aligned_cols=167 Identities=8% Similarity=0.071 Sum_probs=120.6
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhh------hhccchhh-hhcCchhHHHhh----CCCcch----hH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERA------ESASAPEA-KEGQSASEKKEV----APAPEM----AE 70 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~-~~~~~~~~~~~~----~~~~~~----~~ 70 (186)
+..+..+|..+...|++++|...+++++.+.|..... +..+|.+. ..++...+...+ ...+.. .+
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~ 132 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLP 132 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTST
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCc
Confidence 4567889999999999999999999999987765443 34455554 444544433322 211110 13
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcc-----cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--ChHH
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPT-----YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS--NNQA 143 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~ 143 (186)
....++..+|.++...|++++|+..+++++...|. ...++..+|.++...|++++|...+++++.+.+. .+..
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~ 212 (373)
T 1hz4_A 133 MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSD 212 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchh
Confidence 34578888999999999999999999999998664 3567889999999999999999999999987433 2222
Q ss_pred HHH-----HHHHHHHHHHHhhccccccchhhhhcccCCC
Q 044796 144 KRT-----ILRKLKEMGNSILGRFGMSTDNFKAVKDPNT 177 (186)
Q Consensus 144 ~~~-----l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 177 (186)
+.. .+.++.. .|++++|...+.+++.+.+
T Consensus 213 ~~~~~~~~~~~~~~~-----~g~~~~A~~~~~~a~~~~~ 246 (373)
T 1hz4_A 213 WISNANKVRVIYWQM-----TGDKAAAANWLRHTAKPEF 246 (373)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHH-----CCCHHHHHHHHHhCCCCCC
Confidence 221 2222334 8999999999998876543
No 188
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.40 E-value=6.1e-12 Score=94.91 Aligned_cols=15 Identities=13% Similarity=-0.048 Sum_probs=6.4
Q ss_pred hcCHHHHHHHHHHHH
Q 044796 120 LEHFEEAIADMKKIL 134 (186)
Q Consensus 120 ~g~~~~A~~~~~~al 134 (186)
.+++++|+.+|+++.
T Consensus 272 ~~d~~~A~~~~~~a~ 286 (490)
T 2xm6_A 272 AKEPLKALEWYRKSA 286 (490)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 344444444444443
No 189
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.39 E-value=5.9e-12 Score=80.28 Aligned_cols=108 Identities=20% Similarity=0.168 Sum_probs=91.2
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
.+..+..+|.++...|++++|+.++++++.+.+... ..+....++..+|.++.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~---------------------------~~~~~~~~~~~l~~~~~ 100 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK---------------------------DRAVEAQSCYSLGNTYT 100 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------------------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC---------------------------CcHHHHHHHHHHHHHHH
Confidence 346788999999999999999999999999876521 11223578899999999
Q ss_pred hhccHHHHHHHHHHHHhcCc------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 044796 85 KLGKFEESIKECTKALELNP------TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS 139 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 139 (186)
..|++++|+..+++++...+ ....++..+|.++...|++++|+..+++++++...
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998733 23668899999999999999999999999987654
No 190
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.39 E-value=6.3e-13 Score=99.47 Aligned_cols=164 Identities=13% Similarity=0.036 Sum_probs=111.3
Q ss_pred HHHHHHHhHhHHHHcc-----cHHHHHHHHHHHHhccCCChhhhhccchhhhhcCc----hhH----HHhhC--------
Q 044796 5 EANEAKLEGNKLFAEG-----KYEEALLQYEVALRVASVPERAESASAPEAKEGQS----ASE----KKEVA-------- 63 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~----~~~----~~~~~-------- 63 (186)
.+.+++.+|.++...+ ++++|+.+|+++++. .++.++..+|.++..+.. ... .....
T Consensus 68 ~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~ 145 (452)
T 3e4b_A 68 SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFAN--GEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGL 145 (452)
T ss_dssp ---CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHT--TCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHH
T ss_pred CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHH
Confidence 3556788888666655 899999999999984 445577766655422111 000 00000
Q ss_pred ---------------------CCcchhHHHHHHHHHHHHHHhhhc---cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Q 044796 64 ---------------------PAPEMAELRSICHSNRGICFLKLG---KFEESIKECTKALELNPTYMKALIRRAEAHEK 119 (186)
Q Consensus 64 ---------------------~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 119 (186)
........++.+++.+|.++...| ++++|+.+|+++.+..|.....++.+|.++..
T Consensus 146 ~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~ 225 (452)
T 3e4b_A 146 AQVLLYRTQGTYDQHLDDVERICKAALNTTDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGD 225 (452)
T ss_dssp HHHHHHHHHTCGGGGHHHHHHHHHHHTTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 000000112357888898998888 89999999999999998888888889988876
Q ss_pred h----cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 120 L----EHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 120 ~----g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
. +++++|+.+|+++. |.++.+++.+|.++..-.. .+++++|+.+|+++.++
T Consensus 226 g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~--~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 226 ATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPE--LGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp GGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGG--GCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCC--CCCHHHHHHHHHHHHHC
Confidence 5 68899999999987 8888888888877432111 67777777777777544
No 191
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.38 E-value=1.1e-11 Score=83.59 Aligned_cols=138 Identities=10% Similarity=-0.050 Sum_probs=108.1
Q ss_pred HHHHHHHhHhHHHHcc----cHHHHHHHHHHHHhccCCChhhhhccchhhhh-----cCchhHHHhhCCCcchhH--HHH
Q 044796 5 EANEAKLEGNKLFAEG----KYEEALLQYEVALRVASVPERAESASAPEAKE-----GQSASEKKEVAPAPEMAE--LRS 73 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~ 73 (186)
.+.+++.+|.++.. + ++++|+.+|+++.+ +.++.+++.+|.++.. .+...+...+.......+ ..+
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 125 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAV 125 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchH
Confidence 46788999999988 7 99999999999965 6788999999988743 344444444333222222 236
Q ss_pred HHHHHHHHHHhh----hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHh-c-----CHHHHHHHHHHHHhcCCCChHH
Q 044796 74 ICHSNRGICFLK----LGKFEESIKECTKALELNPTYMKALIRRAEAHEKL-E-----HFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 74 ~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g-----~~~~A~~~~~~al~~~p~~~~~ 143 (186)
.+++.+|.+|.. .+++++|+.+|+++++. |.++.+++.+|.+|... | ++++|+.+|+++.+.. ++.+
T Consensus 126 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g--~~~A 202 (212)
T 3rjv_A 126 DAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG--FDTG 202 (212)
T ss_dssp HHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT--CHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC--CHHH
Confidence 899999999999 88999999999999998 67788999999999864 3 8999999999999875 4455
Q ss_pred HHHHH
Q 044796 144 KRTIL 148 (186)
Q Consensus 144 ~~~l~ 148 (186)
...++
T Consensus 203 ~~~l~ 207 (212)
T 3rjv_A 203 CEEFD 207 (212)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 192
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.33 E-value=5e-11 Score=85.74 Aligned_cols=134 Identities=13% Similarity=0.047 Sum_probs=103.1
Q ss_pred HHHHHHhHhHHHHc---ccHHHHHHHHHHHHhccCCChhhhhccchhhhh----c-Cc-------hhHHHhhCCCcchhH
Q 044796 6 ANEAKLEGNKLFAE---GKYEEALLQYEVALRVASVPERAESASAPEAKE----G-QS-------ASEKKEVAPAPEMAE 70 (186)
Q Consensus 6 a~~~~~~g~~~~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~----~-~~-------~~~~~~~~~~~~~~~ 70 (186)
+-.++..|..++.. ..+.+|+.+|+++++++|+++.++..++..... + .. ........ .....+
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~-a~~~~~ 274 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIV-TLPELN 274 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH-TCGGGT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHH-hcccCC
Confidence 45567778777754 456899999999999999999988876654411 1 00 11111111 112334
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNN 141 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 141 (186)
..+.++..+|..+...|++++|+..+++++.++|+ ..++..+|.++...|++++|++.|.+|+.++|..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 45688888998898899999999999999999985 66888999999999999999999999999999875
No 193
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.33 E-value=2.4e-11 Score=76.45 Aligned_cols=115 Identities=11% Similarity=0.033 Sum_probs=91.6
Q ss_pred cccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHH
Q 044796 19 EGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTK 98 (186)
Q Consensus 19 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 98 (186)
.+++++|+.+|+++.+..+. .+. +|.++...+.+++|+.+|++
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-----------------------------------~a~--lg~~y~~g~~~~~A~~~~~~ 50 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-----------------------------------FGC--LSLVSNSQINKQKLFQYLSK 50 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-----------------------------------THH--HHHHTCTTSCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-----------------------------------hhh--HHHHHHcCCCHHHHHHHHHH
Confidence 46899999999999988655 333 88888888888889999988
Q ss_pred HHhcCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhccc
Q 044796 99 ALELNPTYMKALIRRAEAHEK----LEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKD 174 (186)
Q Consensus 99 al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~ 174 (186)
+.+. .++.+.+++|.++.. .+++++|+.+|+++.+. .++.+..+++.++.. |....+++++|+.+|+++.+
T Consensus 51 Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~-G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 51 ACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA-GKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp HHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH-TSSSCCCHHHHHHHHHHHHH
T ss_pred HHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC-CCCCCcCHHHHHHHHHHHHH
Confidence 8876 578888888988888 78889999999998876 678888888876654 33346788888888887754
Q ss_pred C
Q 044796 175 P 175 (186)
Q Consensus 175 ~ 175 (186)
.
T Consensus 126 ~ 126 (138)
T 1klx_A 126 L 126 (138)
T ss_dssp T
T ss_pred C
Confidence 4
No 194
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.33 E-value=3.2e-12 Score=75.95 Aligned_cols=67 Identities=18% Similarity=0.158 Sum_probs=62.1
Q ss_pred cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 102 LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 102 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.+|+++.+++.+|.++...|++++|+..|+++++++|+++.++..+|.++.. .|++++|+..|++++
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-----~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYER-----LDRTDDAIDTYAQGI 68 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999 999999999999885
No 195
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.30 E-value=1.5e-10 Score=85.99 Aligned_cols=123 Identities=14% Similarity=0.147 Sum_probs=96.1
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK 85 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 85 (186)
+.........+...|+|++|+..++++++..... ....++.....+.++|.+|..
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~-------------------------lg~~h~~~~~~~~~L~~~y~~ 341 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSER-------------------------LPDINIYQLKVLDCAMDACIN 341 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCC-------------------------CCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCc-------------------------CCccchHHHHHHHHHHHHHHh
Confidence 3444555566778999999999999999875441 333445566899999999999
Q ss_pred hccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCChHHH---HHHHH
Q 044796 86 LGKFEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-----DPSNNQAK---RTILR 149 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~---~~l~~ 149 (186)
+|+|++|+.++++++.+ +|+-...++++|.++..+|++++|+..+++|+++ .|++|.+. .+++.
T Consensus 342 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~ 421 (429)
T 3qwp_A 342 LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEE 421 (429)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 99999999999999976 3445668999999999999999999999999975 56666544 44554
Q ss_pred HHHH
Q 044796 150 KLKE 153 (186)
Q Consensus 150 ~~~~ 153 (186)
+...
T Consensus 422 ~~~e 425 (429)
T 3qwp_A 422 CDAN 425 (429)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 196
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.27 E-value=2.8e-10 Score=84.46 Aligned_cols=112 Identities=12% Similarity=-0.028 Sum_probs=89.5
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhcc
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGK 88 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 88 (186)
....+......|+|++|+..|++++++.... ....++.....+.++|.+|..+|+
T Consensus 301 ~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~-------------------------lg~~Hp~~a~~~~nLa~~y~~~g~ 355 (433)
T 3qww_A 301 VIEEFRRAKHYKSPSELLEICELSQEKMSSV-------------------------FEDSNVYMLHMMYQAMGVCLYMQD 355 (433)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTT-------------------------BCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhccCHHHHHHHHHHHHHHhhCc-------------------------cChhchHHHHHHHHHHHHHHhhcC
Confidence 3334444456789999999999999875441 233344566899999999999999
Q ss_pred HHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCChHHHH
Q 044796 89 FEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-----DPSNNQAKR 145 (186)
Q Consensus 89 ~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~ 145 (186)
|++|+.++++++.+ .|+-...+.++|.+|..+|++++|+..|++|+.+ .|++|.+..
T Consensus 356 ~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 356 WEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 99999999999976 4555678999999999999999999999999975 577766543
No 197
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.27 E-value=6.1e-11 Score=70.92 Aligned_cols=83 Identities=20% Similarity=0.162 Sum_probs=66.4
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK 85 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 85 (186)
+..++.+|..++..|+|..|+..|++|++..+... ......+.++..+|.++.+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~--------------------------~~~~~~~~i~~~L~~~~~~ 58 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGE--------------------------ISTIDKVSVLDYLSYAVYQ 58 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC--------------------------CCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccC--------------------------CCcccHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999764411 0011134777888888888
Q ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHH
Q 044796 86 LGKFEESIKECTKALELNPTYMKALIRRA 114 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg 114 (186)
+|++++|+..++++++++|+++.+..+++
T Consensus 59 ~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 59 QGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 88888888888888888888888877776
No 198
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.27 E-value=3.3e-10 Score=71.44 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHhhhc---cHHHHHHHHHHHHhcC-c-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 73 SICHSNRGICFLKLG---KFEESIKECTKALELN-P-TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
..+.+.+|.++.+.+ +.++++..++.+++.+ | +..+++|.+|..++++|+|++|+++++++++++|++..+....
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 388899999998877 7789999999999998 7 6689999999999999999999999999999999999998876
Q ss_pred HHHHHH
Q 044796 148 LRKLKE 153 (186)
Q Consensus 148 ~~~~~~ 153 (186)
..+-..
T Consensus 112 ~~ie~~ 117 (152)
T 1pc2_A 112 RLIDKA 117 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 654444
No 199
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.25 E-value=2e-10 Score=68.63 Aligned_cols=78 Identities=17% Similarity=0.081 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcC-------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELN-------PTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAK 144 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 144 (186)
++.-++.+|..++..++|..|+.+++.|++.. +..+.++..+|.++..+|+++.|+..++++++++|+++.+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 34677899999999999999999999999863 35688999999999999999999999999999999999998
Q ss_pred HHHHH
Q 044796 145 RTILR 149 (186)
Q Consensus 145 ~~l~~ 149 (186)
.++..
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88773
No 200
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.24 E-value=8.7e-11 Score=68.66 Aligned_cols=71 Identities=24% Similarity=0.177 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhhhcc---HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChH
Q 044796 72 RSICHSNRGICFLKLGK---FEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 142 (186)
++..+..+|.++...++ .++|...+++++..+|+++.+++.+|..++..|+|++|+.+|+++++.+|.++.
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 44888889988875555 799999999999999999999999999999999999999999999999999543
No 201
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.22 E-value=1.1e-11 Score=91.25 Aligned_cols=93 Identities=10% Similarity=0.029 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
..|..+|..+...|.|++|+.+|.++ ..|..+|.|+.++|++++|++.++++ +++.+|..+..++..
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVD 189 (449)
T ss_dssp --------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHH
Confidence 58899999999999999999999976 47788999999999999999999999 367777777666666
Q ss_pred HH-------------------------HHhhccccccchhhhhcccCCCCc
Q 044796 154 MG-------------------------NSILGRFGMSTDNFKAVKDPNTGA 179 (186)
Q Consensus 154 ~~-------------------------~~~~~~~~~A~~~~~~~~~~~~~~ 179 (186)
.| ....|++++|+..+++++..++..
T Consensus 190 ~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 190 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp TTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred cCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 54 123788888888888887665443
No 202
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=4.3e-10 Score=83.12 Aligned_cols=163 Identities=9% Similarity=0.026 Sum_probs=101.1
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhh------ccchhhh-hcCchhHHHh----hCCC--cchhHH
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAES------ASAPEAK-EGQSASEKKE----VAPA--PEMAEL 71 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~------~~~~~~~-~~~~~~~~~~----~~~~--~~~~~~ 71 (186)
...++..+|..+...|++++|+.++.+++...+....+.. .++.+.. .+..+.+... +... ......
T Consensus 54 ~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 54 QETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 3456889999999999999999999999998777543321 1222221 1222221111 1100 011112
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKR 145 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 145 (186)
...++..+|.++...|+|++|+..+++++.. .|....++...|.++..+|++++|...+++++...+..+....
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 213 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQ 213 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchH
Confidence 3467777778888888888888777777754 3444667777777788888888888888888777665544445
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhc
Q 044796 146 TILRKLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 146 ~l~~~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
..+.++.. .|.+..+...|+.+
T Consensus 214 ~~~~~~~~-----~g~~~~~~~~y~~A 235 (434)
T 4b4t_Q 214 TVAELDLM-----SGILHCEDKDYKTA 235 (434)
T ss_dssp HHHHHHHH-----HHHHTTSSSCHHHH
T ss_pred HHHHHHHH-----HHHHHHHHHhHHHH
Confidence 55555555 44444444444443
No 203
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.18 E-value=3e-10 Score=93.37 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH--
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKL-- 151 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~-- 151 (186)
..+..+|..+...|+|++|+.+|.++ ..|..+|.++.++|++++|++.++++.. ..+|...+.++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n-----~~aWkev~~acve 1262 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANS-----TRTWKEVCFACVD 1262 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCC-----HHHHHHHHHHHhh
Confidence 45667999999999999999999996 4788899999999999999999999943 34443322221
Q ss_pred ---------------------HHHHHH--hhccccccchhhhhcccCCCCcc
Q 044796 152 ---------------------KEMGNS--ILGRFGMSTDNFKAVKDPNTGAY 180 (186)
Q Consensus 152 ---------------------~~~~~~--~~~~~~~A~~~~~~~~~~~~~~~ 180 (186)
..++.. ..|.|++|+..++.++..++...
T Consensus 1263 ~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~ 1314 (1630)
T 1xi4_A 1263 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHM 1314 (1630)
T ss_pred hhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHh
Confidence 111111 27899999999998876655443
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.17 E-value=6.7e-10 Score=69.77 Aligned_cols=98 Identities=9% Similarity=-0.025 Sum_probs=84.9
Q ss_pred hHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhh----hc
Q 044796 12 EGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLK----LG 87 (186)
Q Consensus 12 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~ 87 (186)
+|..+...+..++|+.+|+++.+.... .+++.+|.+|.. .+
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~~-----------------------------------~a~~~Lg~~y~~G~g~~~ 75 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNSG-----------------------------------NGCRFLGDFYENGKYVKK 75 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTCH-----------------------------------HHHHHHHHHHHHCSSSCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCCH-----------------------------------HHHHHHHHHHHcCCCCCc
Confidence 788888888899999999999987433 889999999998 89
Q ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 88 KFEESIKECTKALELNPTYMKALIRRAEAHEK----LEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
++++|+.+|+++.+. .++.+.+++|.++.. .+++++|+.+|+++.+.. ++.+...++
T Consensus 76 d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 76 DLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred cHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 999999999999987 679999999999999 899999999999999874 455555544
No 205
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.8e-10 Score=84.17 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=105.0
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhcc-----------------chhh-hhcCchhHHHhhCCCcc
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESAS-----------------APEA-KEGQSASEKKEVAPAPE 67 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~ 67 (186)
+......|..+...|+|++|++.|.++++..|...+..... |.++ ..++.+.+...+.....
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45567788999999999999999999999999876644333 3332 33444444333322222
Q ss_pred hh------HHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCc------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 68 MA------ELRSICHSNRGICFLKLGKFEESIKECTKALELNP------TYMKALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 68 ~~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
.. .....+...+|.++...|++++|+..+++++...+ ....++..+|.++...|++++|+..+.+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~ 163 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR 163 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHH
Confidence 11 11223445566666667777777777777765432 2355677777777777777777777777777
Q ss_pred cCCCCh------HHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 136 FDPSNN------QAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 136 ~~p~~~------~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
...... +++..++.++.. .|+++.|...+++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 164 EFKKLDDKPSLVDVHLLESKVYHK-----LRNLAKSKASLTAAR 202 (434)
T ss_dssp HHTTSSCSTHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHhcccchhHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHH
Confidence 766664 245555555555 777777777777776
No 206
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.12 E-value=7.8e-10 Score=91.01 Aligned_cols=121 Identities=12% Similarity=0.047 Sum_probs=77.9
Q ss_pred CChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCc------------
Q 044796 38 VPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESIKECTKALELNP------------ 104 (186)
Q Consensus 38 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------------ 104 (186)
+.+.+|+.+|... ..+..+++..++.... ++..|...|.++.+.|+|++|++++..+.+..+
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKAd-----D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaY 1177 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKAD-----DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFAL 1177 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhcC-----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHH
Confidence 3344555555444 3333444444433221 235555566666666666666666655554332
Q ss_pred ---------------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhh
Q 044796 105 ---------------TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNF 169 (186)
Q Consensus 105 ---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~ 169 (186)
.+...+..+|..+...|+|++|..+|.++ ..|..++.++.. +|+++.|++.+
T Consensus 1178 AKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvk-----Lge~q~AIEaa 1244 (1630)
T 1xi4_A 1178 AKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVH-----LGEYQAAVDGA 1244 (1630)
T ss_pred HhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHH-----hCCHHHHHHHH
Confidence 12345667899999999999999999986 378888888888 88899999999
Q ss_pred hhcccCC
Q 044796 170 KAVKDPN 176 (186)
Q Consensus 170 ~~~~~~~ 176 (186)
+++.++.
T Consensus 1245 rKA~n~~ 1251 (1630)
T 1xi4_A 1245 RKANSTR 1251 (1630)
T ss_pred HHhCCHH
Confidence 9886553
No 207
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.11 E-value=4.5e-10 Score=84.64 Aligned_cols=110 Identities=15% Similarity=0.041 Sum_probs=91.8
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
...+..+.++|.++...|+|++|+.++++++++.... .+..+|..+..+.++|.+
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~-------------------------lG~~Hp~~a~~l~nLa~~ 402 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL-------------------------YHHNNAQLGMAVMRAGLT 402 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-------------------------SCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-------------------------cCCCCHHHHHHHHHHHHH
Confidence 3567889999999999999999999999999864320 233445566999999999
Q ss_pred HhhhccHHHHHHHHHHHHhc-----Ccc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 044796 83 FLKLGKFEESIKECTKALEL-----NPT---YMKALIRRAEAHEKLEHFEEAIADMKKILEFD 137 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~-----~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (186)
|..+|++++|+..+++|+.+ .|+ -.....+++.++..++.+++|...|.++.+..
T Consensus 403 ~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 403 NWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999976 344 45667789999999999999999999987643
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.08 E-value=7.8e-12 Score=92.11 Aligned_cols=148 Identities=14% Similarity=0.101 Sum_probs=44.7
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcchhHHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEMAELRSICHSNRGI 81 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 81 (186)
.+.++.|..+|..+...|++++|++.|.++ +++..+...+... ..+..+++...+.......+ .+.+...++.
T Consensus 29 ~~~~~vWs~La~A~l~~g~~~eAIdsfika-----~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~-~~~i~~~Li~ 102 (449)
T 1b89_A 29 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKAR-ESYVETELIF 102 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHcC-----CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCc-cchhHHHHHH
Confidence 456778999999999999999999999764 3455666665544 44555555555444333221 2466778889
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhcc
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGR 161 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 161 (186)
+|.+.|++.++.+.++ .| +..+|..+|..+...|.+++|..+|.++ ..|..++.++.. +|+
T Consensus 103 ~Y~Klg~l~e~e~f~~-----~p-n~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~-----Lg~ 163 (449)
T 1b89_A 103 ALAKTNRLAELEEFIN-----GP-NNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVH-----LGE 163 (449)
T ss_dssp ------CHHHHTTTTT-----CC-----------------CTTTHHHHHHHT--------TCHHHHHHHHHT-----TTC
T ss_pred HHHHhCCHHHHHHHHc-----CC-cHHHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHH-----hcc
Confidence 9999999999887775 24 3459999999999999999999999987 468889988888 999
Q ss_pred ccccchhhhhcccC
Q 044796 162 FGMSTDNFKAVKDP 175 (186)
Q Consensus 162 ~~~A~~~~~~~~~~ 175 (186)
|++|++.+.++.+|
T Consensus 164 yq~AVea~~KA~~~ 177 (449)
T 1b89_A 164 YQAAVDGARKANST 177 (449)
T ss_dssp HHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHcCCc
Confidence 99999999988443
No 209
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.06 E-value=3.1e-09 Score=73.81 Aligned_cols=81 Identities=9% Similarity=-0.001 Sum_probs=72.1
Q ss_pred cHHHHHHHHHHHHhcCcc--cHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHHhh
Q 044796 88 KFEESIKECTKALELNPT--YMKALIRRAEAHEKL-----EHFEEAIADMKKILEFDPSN-NQAKRTILRKLKEMGNSIL 159 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~-----g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~~~~~~ 159 (186)
...+|...++++++++|+ +..+|..+|.+|... |+.++|..+|+++++++|+. ..+++.++..+.. .
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~-----~ 252 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCI-----P 252 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT-----T
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH-----h
Confidence 467899999999999999 567999999999995 99999999999999999975 9999998887755 4
Q ss_pred -ccccccchhhhhcc
Q 044796 160 -GRFGMSTDNFKAVK 173 (186)
Q Consensus 160 -~~~~~A~~~~~~~~ 173 (186)
++++.+.+.+++++
T Consensus 253 ~gd~~~a~~~L~kAL 267 (301)
T 3u64_A 253 LNNRAGFDEALDRAL 267 (301)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 88999999999886
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.02 E-value=8.6e-10 Score=64.40 Aligned_cols=71 Identities=21% Similarity=0.188 Sum_probs=64.2
Q ss_pred CcccHHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCCCC
Q 044796 103 NPTYMKALIRRAEAHEKLEH---FEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPNTG 178 (186)
Q Consensus 103 ~p~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 178 (186)
+|+++..+..+|.+++..++ .++|...+++++.++|+++.++..+|..+.. .|+|++|+.+|++++..++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-----~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-----SFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHhhCCC
Confidence 68999999999999986666 7999999999999999999999999999888 99999999999998744443
No 211
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.98 E-value=4.6e-09 Score=82.08 Aligned_cols=165 Identities=7% Similarity=-0.060 Sum_probs=122.3
Q ss_pred HHHHHHhHhHHHHcccHHHHH-HHHHHHHhccCCChhhhhccchhh-hhcCchhHHHhhCCCcch---------------
Q 044796 6 ANEAKLEGNKLFAEGKYEEAL-LQYEVALRVASVPERAESASAPEA-KEGQSASEKKEVAPAPEM--------------- 68 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~-~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------------- 68 (186)
++.|+..+......|+.++|. ..|++++...|.....|..++... ..++.+.+...+......
T Consensus 343 ~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~ 422 (679)
T 4e6h_A 343 PEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTN 422 (679)
T ss_dssp HHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcc
Confidence 567888888888888888997 999999999999888777777655 233333332222111110
Q ss_pred -------hHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCC
Q 044796 69 -------AELRSICHSNRGICFLKLGKFEESIKECTKALEL-NPTYMKALIRRAEAHEKLE-HFEEAIADMKKILEFDPS 139 (186)
Q Consensus 69 -------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~ 139 (186)
......+|...+......|..+.|...|.+|++. .+....+|...|.+-...| +++.|...|+++++..|+
T Consensus 423 ~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 423 ESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 0013457888888888889999999999999987 4445667777777766665 489999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhccccccchhhhhcccC
Q 044796 140 NNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDP 175 (186)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 175 (186)
++..|..++..+.. .++.+.|...|++++..
T Consensus 503 ~~~~w~~y~~fe~~-----~~~~~~AR~lferal~~ 533 (679)
T 4e6h_A 503 DGEYINKYLDFLIY-----VNEESQVKSLFESSIDK 533 (679)
T ss_dssp CHHHHHHHHHHHHH-----HTCHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHh
Confidence 99988888887777 78888888999888643
No 212
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.91 E-value=1.5e-08 Score=63.97 Aligned_cols=80 Identities=11% Similarity=-0.000 Sum_probs=65.2
Q ss_pred HHHHHHhHhHHHHcc---cHHHHHHHHHHHHhcc-CCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEG---KYEEALLQYEVALRVA-SVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGI 81 (186)
Q Consensus 6 a~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 81 (186)
.+..|+.|.++.+.+ +.++++..++.+++.+ |. .+.++++.+|.
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~--------------------------------~~rd~lY~LAv 79 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE--------------------------------EQRDYVFYLAV 79 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH--------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--------------------------------chHHHHHHHHH
Confidence 567788888888777 6668888888888776 42 13489999999
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAH 117 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 117 (186)
.+.++|+|++|..+++++++++|++..+....-.+-
T Consensus 80 ~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 80 GNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 999999999999999999999999998877655543
No 213
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.90 E-value=1.1e-08 Score=72.32 Aligned_cols=136 Identities=9% Similarity=-0.063 Sum_probs=98.6
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCC----Chhhhhccc--hhh-hhc--CchhHH----HhhCCCcchhH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASV----PERAESASA--PEA-KEG--QSASEK----KEVAPAPEMAE 70 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~----~~~~~~~~~--~~~-~~~--~~~~~~----~~~~~~~~~~~ 70 (186)
...+.+...+.++...|+.+.|.+.+++..+.+|+ +......++ .+. ..+ +...+. +.....|...
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~- 212 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWK- 212 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHH-
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcc-
Confidence 35677778889999999999999999999999983 222223332 112 112 333332 2333333211
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhc----------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALEL----------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSN 140 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 140 (186)
.+..+.+ ++..+|++++|...++.+++. +|+++.++.++..+...+|+ +|.+++.++.+.+|++
T Consensus 213 -~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 213 -TQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp -HHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred -cHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 1233333 899999999999999987776 48899999999999999998 8999999999999999
Q ss_pred hHHHHH
Q 044796 141 NQAKRT 146 (186)
Q Consensus 141 ~~~~~~ 146 (186)
+.+...
T Consensus 287 p~i~d~ 292 (310)
T 3mv2_B 287 AFIKHH 292 (310)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 987554
No 214
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.90 E-value=1.2e-08 Score=70.91 Aligned_cols=89 Identities=13% Similarity=0.079 Sum_probs=78.4
Q ss_pred cHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhh-----ccHHHHHHH
Q 044796 21 KYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKL-----GKFEESIKE 95 (186)
Q Consensus 21 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~A~~~ 95 (186)
...+|...++++++++|+.. ...+|..+|..|... |+.++|..+
T Consensus 178 ~l~~A~a~lerAleLDP~~~-------------------------------~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQ-------------------------------EGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHH-------------------------------HHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcc-------------------------------cCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 45788888999999999821 347889999999884 999999999
Q ss_pred HHHHHhcCccc-HHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCCC
Q 044796 96 CTKALELNPTY-MKALIRRAEAHEK-LEHFEEAIADMKKILEFDPSN 140 (186)
Q Consensus 96 ~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~ 140 (186)
|+++++++|+. ..+++.+|..+.. .|++++|...+++++..+|..
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999975 9999999999988 599999999999999998874
No 215
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.86 E-value=8.8e-09 Score=76.52 Aligned_cols=87 Identities=11% Similarity=0.037 Sum_probs=72.3
Q ss_pred HHhhhccHHHHHHHHHHHHhc-----C---cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCChHHHH
Q 044796 82 CFLKLGKFEESIKECTKALEL-----N---PTYMKALIRRAEAHEKLEHFEEAIADMKKILEF--------DPSNNQAKR 145 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~-----~---p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~ 145 (186)
.....|+|++|+..+++++.+ . |.-...+.++|.+|..+|++++|+.++++++.+ +|+....+.
T Consensus 307 ~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 386 (433)
T 3qww_A 307 RAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWL 386 (433)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred HhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 334568899999999999986 3 444567899999999999999999999999975 344456688
Q ss_pred HHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 146 TILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 146 ~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
++|.++.. +|++++|+..|++++
T Consensus 387 nLa~~~~~-----qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 387 KLGRLYMG-----LENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHh-----ccCHHHHHHHHHHHH
Confidence 88988888 999999999998874
No 216
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.80 E-value=6.1e-07 Score=54.64 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhhccHH---HHHHHHHHHHhcC-c-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFE---ESIKECTKALELN-P-TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTIL 148 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~---~A~~~~~~al~~~-p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 148 (186)
.+.+.+|.++.+..+.. ++|..++..+..+ | ..-+.++.+|..++++|+|+.|+.+++..++.+|+|..+.....
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 77888888888776555 4999999999887 6 56789999999999999999999999999999999999877655
Q ss_pred HH
Q 044796 149 RK 150 (186)
Q Consensus 149 ~~ 150 (186)
.+
T Consensus 116 ~i 117 (126)
T 1nzn_A 116 LI 117 (126)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 217
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.76 E-value=9.9e-08 Score=68.83 Aligned_cols=70 Identities=7% Similarity=-0.067 Sum_probs=60.4
Q ss_pred hcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhcccCC
Q 044796 101 ELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVKDPN 176 (186)
Q Consensus 101 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 176 (186)
..+|.++.++..+|..+...|++++|+..+++++.++|+ ..++..+|.++.. .|++++|++.|.+++..+
T Consensus 271 ~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~-----~G~~~eA~e~~~~AlrL~ 340 (372)
T 3ly7_A 271 PELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEM-----KGMNREAADAYLTAFNLR 340 (372)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHS
T ss_pred ccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHH-----CCCHHHHHHHHHHHHhcC
Confidence 456888888888888888899999999999999999975 6677888877777 999999999999996433
No 218
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.72 E-value=8e-07 Score=67.27 Aligned_cols=160 Identities=14% Similarity=-0.040 Sum_probs=108.4
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcC-chhHHHhhCCCc------chhHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQ-SASEKKEVAPAP------EMAELRSICHSN 78 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~ 78 (186)
+..|+..+......|+.++|...|++++.. |.....+...+....... ............ ...+....+|..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 567888888888999999999999999999 998777665544321110 111111111010 011223467888
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLE-HFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS 157 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 157 (186)
.+......+..+.|...|+++ ...+.....|...|.+-...+ +.+.|...|+.+++..|+++..+...+.....
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~---- 366 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR---- 366 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----
Confidence 888888888899999999999 433334567777777766666 69999999999999999988877766665555
Q ss_pred hhccccccchhhhhc
Q 044796 158 ILGRFGMSTDNFKAV 172 (186)
Q Consensus 158 ~~~~~~~A~~~~~~~ 172 (186)
.|+.+.|...|+++
T Consensus 367 -~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 367 -IGDEENARALFKRL 380 (493)
T ss_dssp -HTCHHHHHHHHHHS
T ss_pred -cCCHHHHHHHHHHH
Confidence 44444555555443
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.70 E-value=5.8e-08 Score=72.16 Aligned_cols=88 Identities=18% Similarity=0.113 Sum_probs=72.8
Q ss_pred HHHhhhccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCC---ChHHH
Q 044796 81 ICFLKLGKFEESIKECTKALEL--------NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF-----DPS---NNQAK 144 (186)
Q Consensus 81 ~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~---~~~~~ 144 (186)
.-+..+|+|++|+..+++++.+ +|.-...+.++|.+|..+|++++|+.++++++.+ .|+ ....+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 4455788999999999999976 3344568899999999999999999999999975 344 45568
Q ss_pred HHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 145 RTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 145 ~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
.++|.++.. +|++++|+..|++++
T Consensus 375 ~nLa~~~~~-----~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 375 MKVGKLQLH-----QGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----cCCHHHHHHHHHHHH
Confidence 888888888 999999999998874
No 220
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.68 E-value=7.1e-08 Score=75.48 Aligned_cols=162 Identities=6% Similarity=-0.109 Sum_probs=116.9
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhcc-----------CC-----------Chhhhhccchhh-hhcCchhHHHhhC
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVA-----------SV-----------PERAESASAPEA-KEGQSASEKKEVA 63 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----------p~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~ 63 (186)
..++..+......|++++|...|++++... |. ...+|...+... ..++.+.+...+.
T Consensus 379 ~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~ 458 (679)
T 4e6h_A 379 VLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFG 458 (679)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456677888888999999999999999853 42 223455555443 3344444443333
Q ss_pred CCcch-hHHHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--
Q 044796 64 PAPEM-AELRSICHSNRGICFLKLG-KFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS-- 139 (186)
Q Consensus 64 ~~~~~-~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-- 139 (186)
..... .+.....|...|.+....+ +++.|...|+++++..|+++..|...+......|+.+.|...|++++...|+
T Consensus 459 ~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~ 538 (679)
T 4e6h_A 459 KCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSH 538 (679)
T ss_dssp HHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTT
T ss_pred HHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHH
Confidence 22221 1112366777777776665 4899999999999999999999999999999999999999999999999883
Q ss_pred -ChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 140 -NNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 140 -~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
....|......-.. .|..+.+....+++.
T Consensus 539 ~~~~lw~~~~~fE~~-----~G~~~~~~~v~~R~~ 568 (679)
T 4e6h_A 539 LLKMIFQKVIFFESK-----VGSLNSVRTLEKRFF 568 (679)
T ss_dssp HHHHHHHHHHHHHHH-----TCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHH
Confidence 45667777666666 677777777777664
No 221
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.40 E-value=1.5e-05 Score=48.75 Aligned_cols=82 Identities=13% Similarity=0.016 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhhhc---cHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 72 RSICHSNRGICFLKLG---KFEESIKECTKALELNPT-YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
.+.+.+++|.++.+.. +..++|..++..++.+|. .-+.++.+|..++++|+|+.|.++.+.+++..|+|..+....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 4477777777776654 456899999999999884 578999999999999999999999999999999999987765
Q ss_pred HHHHHH
Q 044796 148 LRKLKE 153 (186)
Q Consensus 148 ~~~~~~ 153 (186)
..+-..
T Consensus 119 ~~Ie~k 124 (134)
T 3o48_A 119 SMVEDK 124 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544333
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.38 E-value=1.3e-05 Score=50.95 Aligned_cols=117 Identities=12% Similarity=0.044 Sum_probs=81.5
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhcc
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGK 88 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 88 (186)
++.-...++..|.|+.|+-....++.+..+++++ -........+..+|..++..++
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~------------------------~sp~~~~~~l~~ladalf~~~e 78 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPEL------------------------FSPPQKYQLLVYHADSLFHDKE 78 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTS------------------------SCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccc------------------------ccHHHHHHHHHHHHHHHHcccH
Confidence 5666778889999999999999988775442211 0122245788999999999999
Q ss_pred HHHHHHHHHHHHhcCc---c----------------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 89 FEESIKECTKALELNP---T----------------------YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p---~----------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
|..|...|+++++... . +.+..+.++.|+..+|++++|+..++..=.. -.++.+
T Consensus 79 yrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k-~Rt~kv 157 (167)
T 3ffl_A 79 YRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSR-QRTPKI 157 (167)
T ss_dssp HHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGG-GCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCch-hcCHHH
Confidence 9999999999976521 1 1257778888888888888888876653211 123455
Q ss_pred HHHHHHH
Q 044796 144 KRTILRK 150 (186)
Q Consensus 144 ~~~l~~~ 150 (186)
...||+.
T Consensus 158 nm~LakL 164 (167)
T 3ffl_A 158 NMLLANL 164 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 223
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.35 E-value=4.5e-06 Score=50.81 Aligned_cols=98 Identities=10% Similarity=0.004 Sum_probs=64.8
Q ss_pred HcccHHHHHHHHHHHHhccCCChhhhhccchhh-hhcCchhH-------HHhhCCCcchhHHHHHHHHHHHHHHhhhccH
Q 044796 18 AEGKYEEALLQYEVALRVASVPERAESASAPEA-KEGQSASE-------KKEVAPAPEMAELRSICHSNRGICFLKLGKF 89 (186)
Q Consensus 18 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 89 (186)
.......+...|.+.+..++...++.+.++..+ ......+. ...+... .+...-.+.+.+|..+++.|+|
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~--~p~~~Rd~lY~LAvg~yklg~Y 90 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG--SKEEQRDYVFYLAVGNYRLKEY 90 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS--CHHHHHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHhhhH
Confidence 344555666667776666666666666666554 22222111 1112211 0113458999999999999999
Q ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 044796 90 EESIKECTKALELNPTYMKALIRRAEAH 117 (186)
Q Consensus 90 ~~A~~~~~~al~~~p~~~~~~~~lg~~~ 117 (186)
++|..+++..|++.|++..+......+-
T Consensus 91 ~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 91 EKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999998877665543
No 224
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.28 E-value=1.7e-05 Score=48.47 Aligned_cols=80 Identities=11% Similarity=0.009 Sum_probs=65.5
Q ss_pred HHHHHHhHhHHHHccc---HHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGK---YEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
+...|+.|.++.+..+ ..+++..++..++..|.. ..++++.+|..
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~--------------------------------~Rd~LYyLAvg 87 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--------------------------------RRECLYYLTIG 87 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG--------------------------------HHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch--------------------------------hHHHHHHHHHH
Confidence 4677888888887664 457888888888876641 23899999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEAH 117 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 117 (186)
+.++|+|++|..+.+.++++.|++..+......+-
T Consensus 88 ~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie 122 (134)
T 3o48_A 88 CYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 122 (134)
T ss_dssp HHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 99999999999999999999999998877665543
No 225
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.25 E-value=6.6e-05 Score=46.50 Aligned_cols=82 Identities=13% Similarity=0.009 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhhhc---cHHHHHHHHHHHHhcCc-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 044796 72 RSICHSNRGICFLKLG---KFEESIKECTKALELNP-TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTI 147 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 147 (186)
.....+++|.++.+.. +-.+++..++..+...| ..-+.+|.+|..++++|+|++|.++.+..++.+|+|.++....
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4477788888877655 45689999999999888 4578999999999999999999999999999999999887765
Q ss_pred HHHHHH
Q 044796 148 LRKLKE 153 (186)
Q Consensus 148 ~~~~~~ 153 (186)
..+-..
T Consensus 118 ~~Ie~~ 123 (144)
T 1y8m_A 118 SMVEDK 123 (144)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544433
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.23 E-value=4.2e-05 Score=47.40 Aligned_cols=79 Identities=11% Similarity=0.007 Sum_probs=65.1
Q ss_pred HHHHHHhHhHHHHccc---HHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGK---YEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.+..|+.|.++.+..+ ..+++..++..+...|.. .-++.+.+|..
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~--------------------------------~RdcLYyLAvg 86 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--------------------------------RRECLYYLTIG 86 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST--------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc--------------------------------hhHHHHHHHHH
Confidence 5677888888887664 457888888888877651 23789999999
Q ss_pred HhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHH
Q 044796 83 FLKLGKFEESIKECTKALELNPTYMKALIRRAEA 116 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 116 (186)
+.++|+|++|..+++..|++.|++..+......+
T Consensus 87 ~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 87 CYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 9999999999999999999999998886665544
No 227
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.23 E-value=0.00012 Score=45.77 Aligned_cols=115 Identities=9% Similarity=-0.075 Sum_probs=91.9
Q ss_pred HHHHHHHhHhHHHHcccH------HHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHH
Q 044796 5 EANEAKLEGNKLFAEGKY------EEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~------~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
..+.|+......-..|+. ++-++.|++|+..-|.... .........|..
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~-------------------------~~wrrYI~LWIr 66 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKY-------------------------GQNESFARIQVR 66 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGG-------------------------TTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCcccc-------------------------ccHHHHHHHHHH
Confidence 457788777777777888 8888999999988776310 001112367777
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHH
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKR 145 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 145 (186)
.|.. ...++.++|...|+.++......+.+|...|..-.++|+...|...+.+++.+.|...+...
T Consensus 67 YA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 67 FAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred HHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 7755 56689999999999999988888999999999999999999999999999999998766544
No 228
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.13 E-value=1e-05 Score=51.50 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH---------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------C
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYM---------KALIRRAEAHEKLEHFEEAIADMKKILEFD------P 138 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------p 138 (186)
++++.........|.|+.|+-....++....+++ .++..+|.+++..|+|..|...|+++++.. |
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5566667778889999999999999887644333 378899999999999999999999987542 1
Q ss_pred -------------------CChHHHHHHHHHHHHHHHHhhccccccchhhhhc
Q 044796 139 -------------------SNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 139 -------------------~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
.+.++.+.++.|+.. ++++++|+..++.+
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~-----l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTV-----LKQDKDAIAILDGI 148 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHH-----TTCHHHHHHHHHTS
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHH-----HCCHHHHHHHHhcC
Confidence 112688999999999 99999999998875
No 229
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.97 E-value=5.4e-05 Score=59.77 Aligned_cols=61 Identities=20% Similarity=0.235 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKI 133 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (186)
...+...+..+..+|+++-|+.+.++|+..-|.....|+.|+.||..+|+|+.|+-.++.+
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4567778888899999999999999999999999999999999999999999999988876
No 230
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.88 E-value=0.00046 Score=52.26 Aligned_cols=111 Identities=8% Similarity=-0.135 Sum_probs=83.6
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhh
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKL 86 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 86 (186)
..|...+....+.++.+.|...|.++ . .|.. ....|...|......
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~--------------------------------~~~v~i~~A~lE~~~ 332 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-G-NEGV--------------------------------GPHVFIYCAFIEYYA 332 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCC--------------------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCC--------------------------------ChHHHHHHHHHHHHH
Confidence 44556666666677889999999988 3 3330 114566666666665
Q ss_pred c-cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 044796 87 G-KFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMG 155 (186)
Q Consensus 87 ~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 155 (186)
+ +.+.|...|+.+++..|+.+..+...+......|+.+.|...|+++ +.....|......-...|
T Consensus 333 ~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G 398 (493)
T 2uy1_A 333 TGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVG 398 (493)
T ss_dssp HCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCC
Confidence 6 5999999999999999999998888888889999999999999998 345667777776666633
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.77 E-value=0.00095 Score=50.67 Aligned_cols=151 Identities=9% Similarity=-0.010 Sum_probs=103.8
Q ss_pred HhHhHHHHcccHHHHHHHHHHHHhcc--CCChhhhhccchhhhhcC---------chhHHHhh------CCCcchhHHHH
Q 044796 11 LEGNKLFAEGKYEEALLQYEVALRVA--SVPERAESASAPEAKEGQ---------SASEKKEV------APAPEMAELRS 73 (186)
Q Consensus 11 ~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~---------~~~~~~~~------~~~~~~~~~~~ 73 (186)
..-..+.+.|++++|+..|++..+.. |+.......+..+...+. .+.+...+ ...| +.
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P-----d~ 105 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP-----NE 105 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC-----CH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC-----CH
Confidence 33356678999999999999987753 432221111111111110 11111111 1122 34
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-ChHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALEL--NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS-NNQAKRTILRK 150 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~ 150 (186)
..|..+-..+.+.|++++|...+++.... .| +...|..+-..+.+.|+.++|.+.|.+..+..-. +..++..+..+
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~ 184 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 184 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 67888889999999999999999998764 44 5667777888899999999999999999875322 45678888878
Q ss_pred HHHHHHHhhccccccchhhhhc
Q 044796 151 LKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 151 ~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
+.. .|+.++|.+.+++.
T Consensus 185 ~~~-----~g~~d~A~~ll~~M 201 (501)
T 4g26_A 185 SMD-----TKNADKVYKTLQRL 201 (501)
T ss_dssp HHH-----TTCHHHHHHHHHHH
T ss_pred Hhh-----CCCHHHHHHHHHHH
Confidence 888 88999999998765
No 232
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.73 E-value=0.00018 Score=45.05 Aligned_cols=96 Identities=11% Similarity=0.004 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHhhhccH------HHHHHHHHHHHhcCcc--------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 044796 72 RSICHSNRGICFLKLGKF------EESIKECTKALELNPT--------YMKALIRRAEAHEKLEHFEEAIADMKKILEFD 137 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~------~~A~~~~~~al~~~p~--------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (186)
+++.|........+.|+. ++-+..|++|+..-|. +...|...|.. ...++.+.|.+.|+.++.++
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~h 90 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANC 90 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHh
Confidence 347777777777777887 8888999999987654 35677777855 67799999999999999998
Q ss_pred CCChHHHHHHHHHHHHHHHHhhccccccchhhhhcc
Q 044796 138 PSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAVK 173 (186)
Q Consensus 138 p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~~ 173 (186)
...+.+|...++.-.. +|....|...+.+++
T Consensus 91 KkFAKiwi~~AqFEiR-----qgnl~kARkILg~Ai 121 (161)
T 4h7y_A 91 KKFAFVHISFAQFELS-----QGNVKKSKQLLQKAV 121 (161)
T ss_dssp TTBHHHHHHHHHHHHH-----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----cccHHHHHHHHHHHh
Confidence 8888888888887777 777777777776665
No 233
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.67 E-value=0.0037 Score=45.87 Aligned_cols=118 Identities=16% Similarity=0.117 Sum_probs=84.1
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhh
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKL 86 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 86 (186)
+.+...|......|+.+.|...+.+++.+.....-.- ... ....... ..........+...++..+...
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~--~~~------~~w~~~~---r~~l~~~~~~a~~~~~~~~l~~ 184 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDD--LRD------FQFVEPF---ATALVEDKVLAHTAKAEAEIAC 184 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGG--GTT------STTHHHH---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCC--CCc------hhHHHHH---HHHHHHHHHHHHHHHHHHHHHC
Confidence 4455556666677899999999999999864422110 000 0000000 0001111235666778888999
Q ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 87 GKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
|++.+|+..+..++..+|.+..++..+-.++...|+..+|+..|+++..
T Consensus 185 g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 185 GRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988754
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=97.61 E-value=0.00079 Score=50.89 Aligned_cols=80 Identities=11% Similarity=0.003 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKE 153 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 153 (186)
.++..+|.+......+..|..+|.+|..+.|++..+++.+|.+....|+.-+|+-+|-+++......+.+..++...+..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999888889999998877665
No 235
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.21 E-value=0.021 Score=41.90 Aligned_cols=100 Identities=15% Similarity=0.007 Sum_probs=76.2
Q ss_pred HhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHH
Q 044796 11 LEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFE 90 (186)
Q Consensus 11 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 90 (186)
.+|..++..|+|.+|.+.+.+.++.-.... .......++.....+|...+++.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d---------------------------d~~~llev~lle~~~~~~~~n~~ 156 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD---------------------------DKNLLVEVQLLESKTYHALSNLP 156 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS---------------------------CTHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc---------------------------cchhHHHHHHHHHHHHHHhccHH
Confidence 689999999999999999999887554411 11223477888889999999999
Q ss_pred HHHHHHHHHHhcCc---cc----HHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcC
Q 044796 91 ESIKECTKALELNP---TY----MKALIRRAEAHE-KLEHFEEAIADMKKILEFD 137 (186)
Q Consensus 91 ~A~~~~~~al~~~p---~~----~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~ 137 (186)
++...+.++..... .+ +.....-|..+. ..++|..|...|-.+.+-.
T Consensus 157 k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 157 KARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 99999998876521 12 334555688888 8999999999999997543
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.90 E-value=0.0092 Score=45.19 Aligned_cols=42 Identities=12% Similarity=-0.070 Sum_probs=33.6
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchh
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPE 49 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 49 (186)
-+..+|........+..|..+|.+|+.+.|++..++..+|.+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavl 195 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAIL 195 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHH
Confidence 466789888889999999999999999999965444444443
No 237
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.84 E-value=0.041 Score=35.36 Aligned_cols=71 Identities=14% Similarity=0.122 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHh--c---------------CcccHH-HHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALE--L---------------NPTYMK-ALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~---------------~p~~~~-~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
...+..+.|+.+.++|.+|+.+++..++ . +|.+.+ .+..+|.++...|+.++|+.+|.....
T Consensus 63 Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~ 142 (242)
T 3kae_A 63 TSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFG 142 (242)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcC
Confidence 5667788999999999999999999993 2 233333 566789999999999999999999998
Q ss_pred cCCCChHHH
Q 044796 136 FDPSNNQAK 144 (186)
Q Consensus 136 ~~p~~~~~~ 144 (186)
..|-.+.+-
T Consensus 143 ~~~lf~~vE 151 (242)
T 3kae_A 143 KSFLFSPVE 151 (242)
T ss_dssp HCCCHHHHH
T ss_pred CccccchHH
Confidence 888655443
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.82 E-value=0.056 Score=37.33 Aligned_cols=62 Identities=19% Similarity=0.255 Sum_probs=52.1
Q ss_pred hHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccHHHHH
Q 044796 14 NKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKFEESI 93 (186)
Q Consensus 14 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~ 93 (186)
..+++.|..++|+......++.+|.+. .....+-..+.-.|+|+.|.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da---------------------------------~~R~~LfqLLcv~G~w~RA~ 51 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDA---------------------------------SLRSSFIELLCIDGDFERAD 51 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCH---------------------------------HHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCH---------------------------------HHHHHHHHHHHhcCCHHHHH
Confidence 356789999999999999999999943 55566677788889999999
Q ss_pred HHHHHHHhcCcccHH
Q 044796 94 KECTKALELNPTYMK 108 (186)
Q Consensus 94 ~~~~~al~~~p~~~~ 108 (186)
..++.+.+++|....
T Consensus 52 ~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 52 EQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHHHHHHCGGGHH
T ss_pred HHHHHHHHhCchhhH
Confidence 999999999998643
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.77 E-value=0.021 Score=39.38 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=57.6
Q ss_pred HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 82 CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 82 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
..++.|+.++|+......++.+|.+......+-..+.-.|+++.|...++.+.+++|.....
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 45678999999999999999999999999999999999999999999999999999987544
No 240
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.047 Score=40.57 Aligned_cols=102 Identities=10% Similarity=-0.148 Sum_probs=78.4
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhc
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLG 87 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 87 (186)
.+..+|..++..|+++.|.++|.++....... .. ...++.....++...+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~--------------------------~~----kid~~l~~irl~l~~~ 182 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAIST--------------------------GA----KIDVMLTIARLGFFYN 182 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC--------------------------CS----HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh--------------------------HH----HHHHHHHHHHHHHHhc
Confidence 46678999999999999999999988766551 11 2377888888888999
Q ss_pred cHHHHHHHHHHHHhcC--ccc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 044796 88 KFEESIKECTKALELN--PTY----MKALIRRAEAHEKLEHFEEAIADMKKILEFDPS 139 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~--p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 139 (186)
+|..+...++++.... ..+ .......|..+...++|..|...|..+..-...
T Consensus 183 d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 183 DQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 9999999999987542 112 234445678888999999999999988765443
No 241
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.60 E-value=0.066 Score=34.45 Aligned_cols=88 Identities=19% Similarity=0.129 Sum_probs=61.9
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHh--cc--CCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALR--VA--SVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSN 78 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (186)
+..+...+-.+.|+...+++..|+.+++..+. .+ |+ .++ ....+-..+.. ..-.+..
T Consensus 59 lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~-~d~---------------~~~~ffvd~~D---kEfFy~l 119 (242)
T 3kae_A 59 LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPD-VDA---------------RIQEMFVDPGD---EEFFESL 119 (242)
T ss_dssp CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCC-CCH---------------HHHTTSCCTTC---HHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc-ccc---------------ccceeeeccch---HHHHHHH
Confidence 34566777889999999999999999999994 32 33 111 11111112221 2256677
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCcccHHH
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTYMKA 109 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 109 (186)
+|..+.+.|+-++|+.++.......|-.+.+
T Consensus 120 ~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 120 LGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 8999999999999999999999988765443
No 242
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.60 E-value=0.033 Score=40.82 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=71.6
Q ss_pred HHHHHHHHhhhccHHHHHHHHHHHHhcCcc----------c------------HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 044796 76 HSNRGICFLKLGKFEESIKECTKALELNPT----------Y------------MKALIRRAEAHEKLEHFEEAIADMKKI 133 (186)
Q Consensus 76 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~----------~------------~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (186)
....|......|+.+.|...+.+|+.+... . ..+...++.++...|++.+++..+..+
T Consensus 118 l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~ 197 (388)
T 2ff4_A 118 EKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEAL 197 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 334444455568888999999999887321 0 124445677888999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhhhc
Q 044796 134 LEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 134 l~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
+..+|-+-.++..+-.++.. .|+..+|++.|...
T Consensus 198 ~~~~P~~E~~~~~lm~al~~-----~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 198 TFEHPYREPLWTQLITAYYL-----SDRQSDALGAYRRV 231 (388)
T ss_dssp HHHSTTCHHHHHHHHHHHHT-----TTCHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHH-----cCCHHHHHHHHHHH
Confidence 99999999999999999888 77777888877654
No 243
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.54 E-value=0.17 Score=38.44 Aligned_cols=76 Identities=9% Similarity=0.072 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--CCCChHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALEL--NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF--DPSNNQAKRTILR 149 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~ 149 (186)
..|..+-..+.+.|+.++|...|++..+. .| +...|..+-.++.+.|+.++|.+.+++..+. .|+ ..++..+..
T Consensus 141 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps-~~T~~~l~~ 218 (501)
T 4g26_A 141 RSYGPALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS-KSTFDMIEE 218 (501)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC-HHHHHHHHH
T ss_pred ceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC-HHHHHHHHH
Confidence 67777888889999999999999998865 44 4567788888899999999999999998764 454 334444444
Q ss_pred HH
Q 044796 150 KL 151 (186)
Q Consensus 150 ~~ 151 (186)
.+
T Consensus 219 ~F 220 (501)
T 4g26_A 219 WF 220 (501)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 244
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.018 Score=45.85 Aligned_cols=80 Identities=11% Similarity=0.030 Sum_probs=62.2
Q ss_pred cHHHHHHHHHHHHhc--------Ccc----------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 88 KFEESIKECTKALEL--------NPT----------YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 88 ~~~~A~~~~~~al~~--------~p~----------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
+--+|++...++++. .+. ....+..-+..+...|+++-|+.+-++++...|....+|..|+.
T Consensus 300 ~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~ 379 (754)
T 4gns_B 300 KELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLAR 379 (754)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHH
Confidence 345678877777742 111 12244445777888999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhhhc
Q 044796 150 KLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 150 ~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
+|.. +|+|+.|.-.+.-+
T Consensus 380 vYi~-----l~d~e~ALLtLNSc 397 (754)
T 4gns_B 380 CHIK-----KEEYEKALFAINSM 397 (754)
T ss_dssp HHHH-----TTCHHHHHHHHHHS
T ss_pred HHHH-----hccHHHHHHHHhcC
Confidence 9999 88888887766554
No 245
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.18 Score=37.63 Aligned_cols=106 Identities=14% Similarity=0.009 Sum_probs=79.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICF 83 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 83 (186)
+.+.....++..+...|++.+|...+.......-. ..........+......+
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~---------------------------~~~~~~kve~~l~q~rl~ 187 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYG---------------------------SMEMSEKIQFILEQMELS 187 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS---------------------------SSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh---------------------------cccHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999987643221 001112347778888999
Q ss_pred hhhccHHHHHHHHHHHHh---cCccc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 044796 84 LKLGKFEESIKECTKALE---LNPTY----MKALIRRAEAHEKLEHFEEAIADMKKILEF 136 (186)
Q Consensus 84 ~~~~~~~~A~~~~~~al~---~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (186)
...+++.+|...++++.. ..+.. ...+...|..+...++|.+|..+|..+...
T Consensus 188 l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 188 ILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 999999999999998743 12222 245667788899999999999999988764
No 246
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.41 E-value=0.032 Score=40.96 Aligned_cols=165 Identities=12% Similarity=0.046 Sum_probs=98.2
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccc---h--hh-h-hcCc----hhHHHhhCCCcchhHH--
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASA---P--EA-K-EGQS----ASEKKEVAPAPEMAEL-- 71 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~---~--~~-~-~~~~----~~~~~~~~~~~~~~~~-- 71 (186)
+-.+...+|..+...|+.++-.+++.......+.-+.+...-. . .. . .+.. +.....+.........
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~fl 97 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999998888876555544443322211 0 00 0 0111 1111111111111100
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc----C--cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCChH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL----N--PTYMKALIRRAEAHEKLEHFEEAIADMKKILEFD---PSNNQ 142 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~~~~ 142 (186)
.-..-..+|..|+..|+|.+|...+.+.++. + ..-.+++.....++..+|++..+...+.++.... +.+|.
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~ 177 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPK 177 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHH
Confidence 1123347899999999999999999988864 1 1225677777888999999999999999997653 12232
Q ss_pred HHHHHHHHHHHHH--HH-hhccccccchhhhhc
Q 044796 143 AKRTILRKLKEMG--NS-ILGRFGMSTDNFKAV 172 (186)
Q Consensus 143 ~~~~l~~~~~~~~--~~-~~~~~~~A~~~~~~~ 172 (186)
.. |.+...-| .. ..++|..|...|-.+
T Consensus 178 i~---a~i~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 178 VQ---GALDLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HH---HHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HH---HHHHHHhhHHHHHhccCHHHHHHHHHHH
Confidence 22 22222222 22 267777777776444
No 247
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.73 E-value=0.033 Score=36.01 Aligned_cols=45 Identities=11% Similarity=0.013 Sum_probs=30.3
Q ss_pred hhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 044796 85 KLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKIL 134 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (186)
..|+++.|....+.. ++...|..+|......|+++-|..+|.++-
T Consensus 17 ~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 557777776666543 456677777777777777777777776653
No 248
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=95.67 E-value=0.3 Score=38.14 Aligned_cols=57 Identities=11% Similarity=-0.113 Sum_probs=46.6
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
++...+..|+++.|..++++.-...+..+.+.|.+|.++..+|+.++|...|.++..
T Consensus 291 ~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 291 RVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 333455679999999999876654446688899999999999999999999999985
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.65 E-value=0.12 Score=41.06 Aligned_cols=27 Identities=22% Similarity=0.155 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHH
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKA 99 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~a 99 (186)
...|..+|..+.+.++++.|+.+|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 378999999999999999999999985
No 250
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.15 Score=38.68 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcc-------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPT-------YMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 142 (186)
.+..+..+-..|...+.+++|.....++. .|. ....++.+|.++.-.++|.+|.+++..|+...|.+..
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~ 305 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSK 305 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchh
Confidence 45777888899999999999999999985 332 1456777899999999999999999999998886543
No 251
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.62 E-value=0.83 Score=36.31 Aligned_cols=27 Identities=11% Similarity=0.115 Sum_probs=18.4
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHH
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVA 32 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~a 32 (186)
...|..+|..+.+.++++.|+.+|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 455667777777777777777777654
No 252
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=94.11 E-value=0.39 Score=39.79 Aligned_cols=92 Identities=8% Similarity=-0.059 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHh-----cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--CCCChHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALE-----LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF--DPSNNQAKRT 146 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~ 146 (186)
..+..+-..+.+.|+.++|...|....+ ..| +...|.-+-..+.+.|+.++|.+.|++..+. .|+ ..++..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD-vvTYnt 205 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD-LLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc-HHHHHH
Confidence 4677788899999999999999976443 345 5668888888999999999999999999875 454 556776
Q ss_pred HHHHHHHHHHHhhccc-cccchhhhhc
Q 044796 147 ILRKLKEMGNSILGRF-GMSTDNFKAV 172 (186)
Q Consensus 147 l~~~~~~~~~~~~~~~-~~A~~~~~~~ 172 (186)
+..++.. .|+. +.|.+.|+..
T Consensus 206 LI~glcK-----~G~~~e~A~~Ll~EM 227 (1134)
T 3spa_A 206 ALQCMGR-----QDQDAGTIERCLEQM 227 (1134)
T ss_dssp HHHHHHH-----HTCCHHHHHHHHHHH
T ss_pred HHHHHHh-----CCCcHHHHHHHHHHH
Confidence 6666666 5554 4566666544
No 253
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.97 E-value=0.56 Score=30.27 Aligned_cols=60 Identities=8% Similarity=-0.177 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCc--------ccHHHH-------------HHHHHHHHHhcCHHHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNP--------TYMKAL-------------IRRAEAHEKLEHFEEAIADMKK 132 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~-------------~~lg~~~~~~g~~~~A~~~~~~ 132 (186)
..|..+|......|+++-|..+|.++-.... .+.+-+ .....++..+|+++++++.|.+
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHH
Confidence 7888888888888888888888877433211 111111 1223456677888888887765
Q ss_pred H
Q 044796 133 I 133 (186)
Q Consensus 133 a 133 (186)
.
T Consensus 115 ~ 115 (177)
T 3mkq_B 115 G 115 (177)
T ss_dssp T
T ss_pred C
Confidence 5
No 254
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.84 E-value=0.31 Score=40.95 Aligned_cols=93 Identities=8% Similarity=0.050 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhc---C--------------------cccHHHHHHHHHHHHHhcCHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALEL---N--------------------PTYMKALIRRAEAHEKLEHFEEAIADM 130 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~--------------------p~~~~~~~~lg~~~~~~g~~~~A~~~~ 130 (186)
...+.+|.++...|++++|..+|.++-.- + ...+..|+....++...|.++.+++.-
T Consensus 843 ~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa 922 (1139)
T 4fhn_B 843 IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFS 922 (1139)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45688999999999999999999886321 0 112345677788899999999999999
Q ss_pred HHHHhcCCCChH-----HHHHHHHHHHHHHHHhhccccccchhhhh
Q 044796 131 KKILEFDPSNNQ-----AKRTILRKLKEMGNSILGRFGMSTDNFKA 171 (186)
Q Consensus 131 ~~al~~~p~~~~-----~~~~l~~~~~~~~~~~~~~~~~A~~~~~~ 171 (186)
+.|++..+.+.. .|..+-..... .++|++|-..+-.
T Consensus 923 ~lAi~~~~~~~~~~~~~l~~~iFk~~L~-----l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 923 LLADASKETDDEDLSIAITHETLKTACA-----AGKFDAAHVALMV 963 (1139)
T ss_dssp HHHHHHCCSCCHHHHHHHHHHHHHHHHH-----HCCSGGGGHHHHH
T ss_pred HHHHHhccCCChhhHHHHHHHHHHHHHh-----hCCHHHHHHHHHh
Confidence 999987654332 34444444444 8899988777644
No 255
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=93.45 E-value=3 Score=34.89 Aligned_cols=95 Identities=6% Similarity=-0.088 Sum_probs=74.3
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHh-----ccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALR-----VASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
.+..+-..+.+.|+.++|...|.+.-+ ..|+ ...|..+-..
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----------------------------------vvTYNtLI~G 174 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----------------------------------LDMYNAVMLG 174 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----------------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----------------------------------HhHHHHHHHH
Confidence 356667788999999999999976443 3444 2678888889
Q ss_pred HhhhccHHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHhcC-HHHHHHHHHHHHhcC
Q 044796 83 FLKLGKFEESIKECTKALEL--NPTYMKALIRRAEAHEKLEH-FEEAIADMKKILEFD 137 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~-~~~A~~~~~~al~~~ 137 (186)
+.+.|++++|...|++-.+. .| +...|..+-.++.+.|+ .++|.+.|++..+..
T Consensus 175 lck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 175 WARQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 99999999999999998764 46 45566666667888887 578999999998754
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.45 E-value=0.14 Score=42.93 Aligned_cols=115 Identities=8% Similarity=-0.060 Sum_probs=72.8
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhcc
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGK 88 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 88 (186)
.+.+|.+++..|++++|..+|.++-......... ..... ............. ..+..|......+.+.+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l---~~~~~---~~~~~~~~~~~~~----~l~~YY~hv~~LFe~~~~ 914 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQ---FAVLR---EFQEIAEKYHHQN----LLSCYYLHLSKKLFEESA 914 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCS---CSSHH---HHHHHHHTTTSCC----SSHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchh---hhhhc---ccccccccccccc----cHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999864321111000 00000 0000001111111 123567777888888999
Q ss_pred HHHHHHHHHHHHhcCc-ccH----HHHHHHHHHHHHhcCHHHHHHHHHHH
Q 044796 89 FEESIKECTKALELNP-TYM----KALIRRAEAHEKLEHFEEAIADMKKI 133 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p-~~~----~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (186)
++.+++..+.|++..+ ++. ..|.++=.....+|+|++|...+...
T Consensus 915 ~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 915 YIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp CHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9999999999998643 332 25666667788999999998777543
No 257
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.33 E-value=0.43 Score=35.43 Aligned_cols=98 Identities=8% Similarity=0.041 Sum_probs=69.0
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCc---ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CChHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNP---TYMKALIRRAEAHEKLEHFEEAIADMKKILEFDP--SNNQAKRTIL 148 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~l~ 148 (186)
.++..+|..+...|++++|...+.++..... .-...+...-.++...+++..+...+.++..+.. .++.....+
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l- 210 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY- 210 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH-
Confidence 4677899999999999999999999886532 3367778888888999999999999999976532 233333222
Q ss_pred HHHHHHHHHhhccccccchhhhhc
Q 044796 149 RKLKEMGNSILGRFGMSTDNFKAV 172 (186)
Q Consensus 149 ~~~~~~~~~~~~~~~~A~~~~~~~ 172 (186)
.++..+.....++|..|...|-.+
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~f~e~ 234 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKLLVDS 234 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChHHHHHHHHHHH
Confidence 222222223467777777776544
No 258
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=92.90 E-value=0.76 Score=35.94 Aligned_cols=132 Identities=11% Similarity=-0.074 Sum_probs=72.8
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhc
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLG 87 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 87 (186)
.....+...+...+.+.|...+.......+-... .....+..+|......+
T Consensus 216 ~~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~ia~~~~~~~ 266 (618)
T 1qsa_A 216 QMAAVAFASVARQDAENARLMIPSLAQAQQLNED-----------------------------QIQELRDIVAWRLMGND 266 (618)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHH-----------------------------HHHHHHHHHHHTSCSTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHH-----------------------------HHHHHHHHHHHHHHHcC
Confidence 3445555556666778888888776543322110 01133334444444555
Q ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccch
Q 044796 88 KFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTD 167 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~ 167 (186)
...++...+.+.....+++.......+.++ ..|+++.|...|.+.-.-.+..+...+.+|+++.. .|+.++|..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-----~g~~~~a~~ 340 (618)
T 1qsa_A 267 VTDEQAKWRDDAIMRSQSTSLIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-----RGREAEAKE 340 (618)
T ss_dssp CCHHHHHHHHHHHHTCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-----TTCHHHHHH
T ss_pred CChHHHHHHHhccccCCChHHHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-----cCCHHHHHH
Confidence 345566666665544443333333334433 45788887777766554333456667777777777 555556666
Q ss_pred hhhhccc
Q 044796 168 NFKAVKD 174 (186)
Q Consensus 168 ~~~~~~~ 174 (186)
.|+.+..
T Consensus 341 ~~~~~a~ 347 (618)
T 1qsa_A 341 ILHQLMQ 347 (618)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 6655543
No 259
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.58 E-value=2.3 Score=31.76 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=54.4
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHh-ccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHH
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALR-VASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGIC 82 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 82 (186)
...+.+......++..+++.+|...+.++.. ..+. +.........+...|..
T Consensus 175 ~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~---------------------------~~~~~lk~~~~~~~~~~ 227 (445)
T 4b4t_P 175 EKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN---------------------------PKYESLKLEYYNLLVKI 227 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS---------------------------SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc---------------------------CCcHHHHHHHHHHHHHH
Confidence 4567788888899999999999999998743 2211 11112344677888999
Q ss_pred HhhhccHHHHHHHHHHHHhc
Q 044796 83 FLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 83 ~~~~~~~~~A~~~~~~al~~ 102 (186)
+...++|.+|-.+|..+...
T Consensus 228 ~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 228 SLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHCCHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhc
Confidence 99999999999999998864
No 260
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.48 E-value=2 Score=32.79 Aligned_cols=74 Identities=9% Similarity=-0.063 Sum_probs=55.7
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
++..+..+-..|+..+.+++|.....++. .|... .........++..|.++.
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~--------------------------~sn~q~~rY~YY~GRI~a 281 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLE--YPHTD--------------------------VSSSLEARYFFYLSKINA 281 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTT--------------------------SCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCccc--------------------------CCHHHHHHHHHHHHHHHH
Confidence 45666777778888899999999988864 55411 111123477888999999
Q ss_pred hhccHHHHHHHHHHHHhcCccc
Q 044796 85 KLGKFEESIKECTKALELNPTY 106 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~~p~~ 106 (186)
.+++|.+|..++..|+...|.+
T Consensus 282 ~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 282 IQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HTTCHHHHHHHHHHHTSSCSCS
T ss_pred HhccHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999876643
No 261
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=91.46 E-value=0.48 Score=26.41 Aligned_cols=33 Identities=30% Similarity=0.339 Sum_probs=28.5
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
++.|-.+...|...=..|++++|+.+|..+++.
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 356777888898889999999999999999875
No 262
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=91.09 E-value=0.62 Score=26.35 Aligned_cols=33 Identities=36% Similarity=0.445 Sum_probs=27.8
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
+..|..+-.++..+...|+|++||++.+++...
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 456777788999999999999999998887754
No 263
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=90.70 E-value=0.6 Score=25.26 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=28.9
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhccCCChh
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVASVPER 41 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 41 (186)
-..+|..+...|++++|..+|-+|+...|+..+
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 356899999999999999999999999998443
No 264
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=90.62 E-value=1.8 Score=28.56 Aligned_cols=53 Identities=17% Similarity=0.043 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHH-----HHHHHHHHHHHhcCHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNPTYMK-----ALIRRAEAHEKLEHFE 124 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-----~~~~lg~~~~~~g~~~ 124 (186)
.....+.+|.+++..++|.+|...+..|+..-|.... ++..+-.+-.-+|+..
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3467788999999999999999999999988775432 2333334445567653
No 265
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.59 E-value=0.64 Score=25.88 Aligned_cols=33 Identities=30% Similarity=0.317 Sum_probs=28.4
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
++.|-.+...|...=..|++++|+.+|..+++.
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 356777888898888999999999999998875
No 266
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=90.37 E-value=2.1 Score=26.58 Aligned_cols=121 Identities=13% Similarity=0.037 Sum_probs=71.8
Q ss_pred hHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccch------------------hh---hhcCchhHHHhhCCCcchhH
Q 044796 12 EGNKLFAEGKYEEALLQYEVALRVASVPERAESASAP------------------EA---KEGQSASEKKEVAPAPEMAE 70 (186)
Q Consensus 12 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~------------------~~---~~~~~~~~~~~~~~~~~~~~ 70 (186)
-|...+-.|..++.++...+.....|....-|.-.-. ++ .-+...............
T Consensus 13 eAK~~ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~~-- 90 (172)
T 1wy6_A 13 DAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTL-- 90 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCC--
T ss_pred HHHHHHHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcch--
Confidence 3556677899999999999988877765544442211 11 001111111111101100
Q ss_pred HHHHHHHHHHH-HHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 044796 71 LRSICHSNRGI-CFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFD 137 (186)
Q Consensus 71 ~~~~~~~~~a~-~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (186)
.-+..+|. ....+|+-++-...+...+..++-+|..++.+|.+|.+.|+..+|-+.+.+|.+..
T Consensus 91 ---se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 91 ---NEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp ---CHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 12333443 23345666666666666566667779999999999999999999999999998643
No 267
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=88.88 E-value=3.2 Score=31.14 Aligned_cols=64 Identities=2% Similarity=-0.124 Sum_probs=49.1
Q ss_pred HHHHHHHhhhccHHHHHHHHHHHHhcCc----------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCC
Q 044796 77 SNRGICFLKLGKFEESIKECTKALELNP----------TYMKALIRRAEAHEKLEHFEEAIADMKKILEF-DPSN 140 (186)
Q Consensus 77 ~~~a~~~~~~~~~~~A~~~~~~al~~~p----------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~ 140 (186)
..+-.+|++.++...+...++..-...+ .....+|.+|..+...++|.+|.+.+..|+.. .|.+
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 3455888999998888777755433221 12457888999999999999999999999998 7754
No 268
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=88.80 E-value=1.8 Score=23.44 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=20.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChH
Q 044796 112 RRAEAHEKLEHFEEAIADMKKILEFDPSNNQ 142 (186)
Q Consensus 112 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 142 (186)
.+|..+...|++++|..+|-+|+.+.|.-..
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 4566666777777777777777776665443
No 269
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=88.62 E-value=1.1 Score=25.00 Aligned_cols=33 Identities=27% Similarity=0.247 Sum_probs=28.6
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
+..+..+...|...-..|++++|+.+|..+++.
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 467778888898888999999999999999875
No 270
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=88.44 E-value=1.1 Score=25.51 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=28.4
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
++.|-.+...|...-..|+|++|+.+|..+++.
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 356777888998899999999999999998875
No 271
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.29 E-value=1.5 Score=24.59 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=26.5
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
.+..+...|...-..|++++|+.+|..+++.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4666778888888999999999999999875
No 272
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=86.60 E-value=1.3 Score=26.39 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=28.3
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
+..|..+...|...-..|+|++|+.+|..+++.
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 466777888888888899999999999999875
No 273
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=86.34 E-value=3.4 Score=32.60 Aligned_cols=50 Identities=16% Similarity=0.294 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 044796 108 KALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS 157 (186)
Q Consensus 108 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 157 (186)
......|...+..|+|.-|.+....++..+|+|..++..++.++.++|..
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 44566788888999999999999999999999999999999999998875
No 274
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=86.25 E-value=0.97 Score=25.83 Aligned_cols=31 Identities=29% Similarity=0.476 Sum_probs=27.9
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhccCCC
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVASVP 39 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 39 (186)
-..+|..+...|+++.|+.+|-+|+...|+.
T Consensus 23 eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 23 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3568999999999999999999999999984
No 275
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=84.62 E-value=2.2 Score=24.15 Aligned_cols=29 Identities=34% Similarity=0.355 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHh
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALE 101 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 101 (186)
+..+-.++..+...|+|++||.+.+++..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 46677788999999999999988887664
No 276
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.58 E-value=12 Score=31.06 Aligned_cols=69 Identities=7% Similarity=-0.002 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHh-cCc----------------------ccHHHHHHHHHHHHHhcCHHHHHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALE-LNP----------------------TYMKALIRRAEAHEKLEHFEEAIADM 130 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~p----------------------~~~~~~~~lg~~~~~~g~~~~A~~~~ 130 (186)
..-+.+|.++...|++++|..+|++|-. +.+ .....|.....++...+-++-++..-
T Consensus 841 ~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA 920 (950)
T 4gq2_M 841 IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFS 920 (950)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4457788888888888888888887542 100 01235667777888888888888888
Q ss_pred HHHHhc-CCCChH
Q 044796 131 KKILEF-DPSNNQ 142 (186)
Q Consensus 131 ~~al~~-~p~~~~ 142 (186)
+.|++. .++++.
T Consensus 921 ~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 921 LLADASKETDDED 933 (950)
T ss_dssp HHHHHTCCSCCHH
T ss_pred HHHHhhcccCCcc
Confidence 888864 344443
No 277
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=83.29 E-value=6.6 Score=24.85 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=49.1
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHH-HHHHHHHhhh
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICH-SNRGICFLKL 86 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~ 86 (186)
.-+..|..++..|+|-+|-+.++.+-...+... ....-...-+. ...|..+...
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~-------------------------~er~~lqGLIQ~lAvAl~H~~r 88 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN-------------------------TESKFLHGMVQVAAGAYKHFDF 88 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS-------------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc-------------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 446678889999999999999999888766520 00111122344 4456677778
Q ss_pred ccHHHHHHHHHHHHhc
Q 044796 87 GKFEESIKECTKALEL 102 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~ 102 (186)
|+..-|...+.+++..
T Consensus 89 gN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 89 EDDDGMRSLFRTSLQY 104 (161)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999998863
No 278
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=81.95 E-value=2.9 Score=23.87 Aligned_cols=28 Identities=21% Similarity=0.339 Sum_probs=14.8
Q ss_pred HHHHHHHhhhccHHHHHHHHHHHHhcCc
Q 044796 77 SNRGICFLKLGKFEESIKECTKALELNP 104 (186)
Q Consensus 77 ~~~a~~~~~~~~~~~A~~~~~~al~~~p 104 (186)
..+|..+...|+++.|+.+|-+|+...|
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 3455555555555555555555555433
No 279
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=81.56 E-value=5.5 Score=26.23 Aligned_cols=37 Identities=11% Similarity=-0.046 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHH
Q 044796 107 MKALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQA 143 (186)
Q Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 143 (186)
....+.+|.++...++|.+|...+..|+...|.+...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHH
Confidence 4466778888888888888888888888887766543
No 280
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=80.65 E-value=5.9 Score=22.51 Aligned_cols=63 Identities=21% Similarity=0.122 Sum_probs=41.7
Q ss_pred HHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhccH
Q 044796 10 KLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGKF 89 (186)
Q Consensus 10 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 89 (186)
+..|..++..|+|-+|-+.++..-...|.. ...-...-+...-|..+...|+.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~---------------------------~~~~~qGLIq~Ava~~h~~~gn~ 57 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGE---------------------------ERRLLQGVILLAAALHQRRLGRP 57 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHH---------------------------HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCc---------------------------hHHHHHHHHHHHHHHHHHHcCcH
Confidence 456778888899999999999888776541 11111223444455566667777
Q ss_pred HHHHHHHHHHHh
Q 044796 90 EESIKECTKALE 101 (186)
Q Consensus 90 ~~A~~~~~~al~ 101 (186)
|...+.+++.
T Consensus 58 --a~~ll~~a~~ 67 (94)
T 2cwy_A 58 --GLRNLRKAEA 67 (94)
T ss_dssp --CHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 8788888775
No 281
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=79.60 E-value=5.3 Score=31.53 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFE 124 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~ 124 (186)
......|...+..|+|.-|.+..+.++..+|++..+...++.++.++|.-.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 445667788889999999999999999999999999999999999998443
No 282
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=78.62 E-value=5.3 Score=22.11 Aligned_cols=20 Identities=35% Similarity=0.310 Sum_probs=7.9
Q ss_pred HHHHhhhccHHHHHHHHHHH
Q 044796 80 GICFLKLGKFEESIKECTKA 99 (186)
Q Consensus 80 a~~~~~~~~~~~A~~~~~~a 99 (186)
|.-.-..|++++|+.+|..+
T Consensus 26 Ave~D~~g~y~eAl~lY~~a 45 (83)
T 2w2u_A 26 AVKADKEGNAEEAITNYKKA 45 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHH
Confidence 33333344444444433333
No 283
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.61 E-value=3.2 Score=24.64 Aligned_cols=46 Identities=9% Similarity=0.203 Sum_probs=27.3
Q ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 044796 86 LGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS 139 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 139 (186)
...+++|..+..++|.++.. |.--..+.-|.+++..+.+++.+..+
T Consensus 16 k~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 34578888899999887652 22222222344555666666666553
No 284
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=76.50 E-value=18 Score=25.75 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=27.9
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhccC
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRVAS 37 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 37 (186)
........|..++..|+|++|+..|+.+|-.-|
T Consensus 101 ~l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 133 (320)
T 3mkr_B 101 DLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVP 133 (320)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 344567889999999999999999999987655
No 285
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=76.29 E-value=6.2 Score=21.79 Aligned_cols=11 Identities=18% Similarity=0.015 Sum_probs=5.6
Q ss_pred HHHHHHHHHHh
Q 044796 91 ESIKECTKALE 101 (186)
Q Consensus 91 ~A~~~~~~al~ 101 (186)
+|+....+|++
T Consensus 10 ~Ai~lv~~Ave 20 (83)
T 2v6y_A 10 MARKYAILAVK 20 (83)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555544
No 286
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=75.79 E-value=7.2 Score=21.71 Aligned_cols=27 Identities=4% Similarity=0.151 Sum_probs=15.0
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHh
Q 044796 75 CHSNRGICFLKLGKFEESIKECTKALE 101 (186)
Q Consensus 75 ~~~~~a~~~~~~~~~~~A~~~~~~al~ 101 (186)
.+...|.-.-..|++++|+.+|..+++
T Consensus 18 ~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 18 TVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344455555556666666666555554
No 287
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.78 E-value=13 Score=30.72 Aligned_cols=89 Identities=8% Similarity=-0.067 Sum_probs=55.2
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhcc-CCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhc
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVA-SVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLG 87 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 87 (186)
-+-+|.+++..|++++|..+|++|-.-- +..... .. ............... .....|......+.+.+
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~-----~~--~~~~~~ll~~~e~~~----~~~~YY~hV~~LFE~~~ 911 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQF-----AV--LREFQEIAEKYHHQN----LLSCYYLHLSKKLFEES 911 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSC-----GG--GHHHHHHHHHTTTCS----HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccc-----cc--hhhhhhccCcccccc----hhHHHHHHHHHHHHhcC
Confidence 4789999999999999999999864211 110000 00 000001111111111 12357888899999999
Q ss_pred cHHHHHHHHHHHHhc-CcccHH
Q 044796 88 KFEESIKECTKALEL-NPTYMK 108 (186)
Q Consensus 88 ~~~~A~~~~~~al~~-~p~~~~ 108 (186)
-++-++...+.|++. .++++.
T Consensus 912 a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 912 AYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp CHHHHHHHHHHHHHTCCSCCHH
T ss_pred CHHHHHHHHHHHHhhcccCCcc
Confidence 999999999999975 344443
No 288
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=74.58 E-value=3.6 Score=22.51 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=24.8
Q ss_pred HHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 8 EAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
....+|..+...|+|+.|+.+|+-+++.-
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~qI 42 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQM 42 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 35568889999999999999999998753
No 289
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=73.72 E-value=9.7 Score=21.37 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=29.7
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCC
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVASV 38 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 38 (186)
+.+..+...|..++..++|.+|...|+++..+...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten 85 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN 85 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC
Confidence 45777888899999999999999999999875444
No 290
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=71.49 E-value=25 Score=25.21 Aligned_cols=28 Identities=11% Similarity=-0.111 Sum_probs=24.9
Q ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHH
Q 044796 104 PTYMKALIRRAEAHEKLEHFEEAIADMK 131 (186)
Q Consensus 104 p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (186)
-.+|..+..+|..+...+++.+|..+|-
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 4678999999999999999999998873
No 291
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=71.14 E-value=4.9 Score=21.99 Aligned_cols=28 Identities=11% Similarity=0.179 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 75 CHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 75 ~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
-...+|.-+...|+|+.|+.+|+.+++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3456777788888899888888888764
No 292
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=70.02 E-value=18 Score=22.88 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=46.4
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHhcCccc------HHHHHH-H--HHHHHHhcCHHHHHHHHHHHHhc
Q 044796 75 CHSNRGICFLKLGKFEESIKECTKALELNPTY------MKALIR-R--AEAHEKLEHFEEAIADMKKILEF 136 (186)
Q Consensus 75 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~-l--g~~~~~~g~~~~A~~~~~~al~~ 136 (186)
--+..|..++..|+|=+|-..++.+-...+.. ...+.. + |......|+...|...+.+++..
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34557778888899999999999988775433 233444 3 34456789999999999999874
No 293
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=69.90 E-value=10 Score=20.92 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=14.1
Q ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHh
Q 044796 75 CHSNRGICFLKLGKFEESIKECTKALE 101 (186)
Q Consensus 75 ~~~~~a~~~~~~~~~~~A~~~~~~al~ 101 (186)
.+...|.-.-..|++++|+..|..+++
T Consensus 15 ~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 15 ELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334444444555555555555555554
No 294
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=68.56 E-value=11 Score=21.28 Aligned_cols=24 Identities=4% Similarity=0.191 Sum_probs=11.0
Q ss_pred HHHHHHHhhhccHHHHHHHHHHHH
Q 044796 77 SNRGICFLKLGKFEESIKECTKAL 100 (186)
Q Consensus 77 ~~~a~~~~~~~~~~~A~~~~~~al 100 (186)
...|.-.-..|+|++|+.+|..++
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 334444444445554444444444
No 295
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=67.86 E-value=33 Score=25.10 Aligned_cols=77 Identities=9% Similarity=-0.048 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhhhccH--HHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCC
Q 044796 74 ICHSNRGICFLKLGKF--EESIKECTKALEL-----NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF------DPSN 140 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~--~~A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~ 140 (186)
.++-++|.+-...-.. ..++..|.+++.. +..+...+..+|-.+++.+++.+|+..+..+-.. ..++
T Consensus 256 mALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reD 335 (472)
T 3re2_A 256 MAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDD 335 (472)
T ss_dssp HHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGG
T ss_pred hhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccH
Confidence 4555555444322111 2266777777754 2334567777888999999999999999988654 3445
Q ss_pred hHHHHHHHHH
Q 044796 141 NQAKRTILRK 150 (186)
Q Consensus 141 ~~~~~~l~~~ 150 (186)
.+++..+-.+
T Consensus 336 eEIYKEf~eI 345 (472)
T 3re2_A 336 EEMYKEFHEI 345 (472)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666655543
No 296
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=67.63 E-value=26 Score=23.90 Aligned_cols=32 Identities=3% Similarity=0.028 Sum_probs=28.2
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCC
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASV 38 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 38 (186)
+.+..+|...-+.++|++.+.+.+++...++.
T Consensus 5 e~lv~~AklaeqaeRyddM~~~Mk~v~~~~~e 36 (248)
T 3uzd_A 5 EQLVQKARLAEQAERYDDMAAAMKNVTELNEP 36 (248)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc
Confidence 45677888999999999999999999998776
No 297
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=67.32 E-value=26 Score=23.72 Aligned_cols=32 Identities=9% Similarity=0.001 Sum_probs=28.4
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCC
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASV 38 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 38 (186)
+.+..+|...-+.++|++.+.+.+++...++.
T Consensus 9 e~~v~~AklaeqaeRyddM~~~mk~v~~~~~e 40 (236)
T 3iqu_A 9 ASLIQKAKLAEQAERYEDMAAFMKGAVEKGEE 40 (236)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 45777889999999999999999999998876
No 298
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=66.01 E-value=12 Score=22.17 Aligned_cols=10 Identities=30% Similarity=0.348 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 044796 91 ESIKECTKAL 100 (186)
Q Consensus 91 ~A~~~~~~al 100 (186)
+|+..+.+|+
T Consensus 17 kAi~lv~~Av 26 (117)
T 2cpt_A 17 KAIDLASKAA 26 (117)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444444
No 299
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.94 E-value=17 Score=21.53 Aligned_cols=32 Identities=22% Similarity=0.056 Sum_probs=22.9
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
++|..+...|...=..|+.+.|+.+|++.|..
T Consensus 20 ~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~e 51 (116)
T 2dl1_A 20 KKAFLFVNKGLNTDELGQKEEAKNYYKQGIGH 51 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Confidence 45666677776666678888888888877653
No 300
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=61.63 E-value=36 Score=23.41 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=6.6
Q ss_pred hccHHHHHHHHHHHH
Q 044796 86 LGKFEESIKECTKAL 100 (186)
Q Consensus 86 ~~~~~~A~~~~~~al 100 (186)
+++.++|....++++
T Consensus 211 ln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 211 LNEPRAAIDMAKEAF 225 (260)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 444444444444433
No 301
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=60.61 E-value=18 Score=23.05 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 044796 89 FEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS 139 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 139 (186)
...|...+..+...+|....+.-.+..++..+.+....+..|...+..+|.
T Consensus 72 L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~ 122 (175)
T 4abx_A 72 IGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPE 122 (175)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 445667777777788887788888888999888888888888887777775
No 302
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=59.82 E-value=45 Score=23.83 Aligned_cols=32 Identities=28% Similarity=0.228 Sum_probs=26.9
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhccC
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRVAS 37 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 37 (186)
.......|..++..|+|++|+..|+.+|-.-|
T Consensus 114 L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 145 (325)
T 3mv2_A 114 VNEKMNEGYKNFKLNKPDIAIECFREAIYRIT 145 (325)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 34466789999999999999999999987654
No 303
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=59.62 E-value=18 Score=22.43 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=27.5
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
..+..++..|..+...|+.+.|.-.|-+...+
T Consensus 38 rta~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 38 RSGVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56788999999999999999999888886544
No 304
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=59.13 E-value=55 Score=24.64 Aligned_cols=35 Identities=9% Similarity=-0.000 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc-Cccc
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL-NPTY 106 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-~p~~ 106 (186)
.....+.+|..+...++|.+|..++..|+.. -|..
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 3478889999999999999999999999988 5643
No 305
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=57.01 E-value=33 Score=21.41 Aligned_cols=32 Identities=6% Similarity=-0.013 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcC
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELN 103 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 103 (186)
++..+..+|.+|.+.|+..+|-..+.+|.+..
T Consensus 124 ~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 124 SASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 45899999999999999999999999998753
No 306
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=56.83 E-value=40 Score=25.14 Aligned_cols=29 Identities=3% Similarity=0.004 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHh
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALE 101 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 101 (186)
..++..+|.+++.+++|++|+..+++++.
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 46777788888888899999888888875
No 307
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=56.56 E-value=23 Score=19.77 Aligned_cols=29 Identities=7% Similarity=-0.016 Sum_probs=23.5
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEV 31 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ 31 (186)
++.+..++.-|.-++..|++..|+.++.=
T Consensus 36 l~mA~~Y~~Da~~fl~kGD~v~Ala~isY 64 (87)
T 2pmr_A 36 VERALNYRDDSVYYLEKGDHITSFGCITY 64 (87)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 46778888888888899999998887653
No 308
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=56.51 E-value=24 Score=20.52 Aligned_cols=31 Identities=23% Similarity=0.108 Sum_probs=24.7
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
.|......|....+.|+|++|...++++-+.
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~ 49 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSC 49 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3556677788888999999999999887653
No 309
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=56.40 E-value=24 Score=20.41 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=24.8
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
.++.....|....+.|+|++|...++++-+.
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~ 47 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRMA 47 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3566677788888999999999999887653
No 310
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=56.20 E-value=24 Score=19.66 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=25.2
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHH
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVA 32 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a 32 (186)
++.+..++.-|.-++..|++..|+.++.=+
T Consensus 32 l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 32 MRNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 567888999999999999999999887543
No 311
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=60.80 E-value=2.4 Score=33.53 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 044796 109 ALIRRAEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILRKLKEMGNS 157 (186)
Q Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 157 (186)
.....|...+..|+|.-|.+....++..+|++.+++..++.++.++|..
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 4455667778889999999999999999999999999999999998865
No 312
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=55.11 E-value=37 Score=21.43 Aligned_cols=21 Identities=24% Similarity=0.564 Sum_probs=14.5
Q ss_pred HHhHhHHHHcccHHHHHHHHH
Q 044796 10 KLEGNKLFAEGKYEEALLQYE 30 (186)
Q Consensus 10 ~~~g~~~~~~~~~~~A~~~~~ 30 (186)
+..+...|-..+|.+.+..++
T Consensus 12 ~i~a~~afl~~dYs~VI~~L~ 32 (161)
T 2ynq_A 12 YIQSTELFLQNKYSDVITTLE 32 (161)
T ss_dssp HHHHHHHHTTTCHHHHHHHHT
T ss_pred HHHHHHHHHHhhHHHHHHHHh
Confidence 345666777778887777765
No 313
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=55.06 E-value=44 Score=24.96 Aligned_cols=29 Identities=14% Similarity=0.246 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHh
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALE 101 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 101 (186)
..++..+|.+++-+|+|++|+..+++++.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 46777888888888999999988888875
No 314
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=54.82 E-value=49 Score=22.78 Aligned_cols=30 Identities=7% Similarity=0.016 Sum_probs=26.4
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
+.+..++....+.++|++.+.+++++...+
T Consensus 29 e~~v~~AkLaeqaeRyddmv~~mk~v~~~~ 58 (260)
T 2npm_A 29 ESNVYMAKLAEQAERYDEMAKYMKDVVEAR 58 (260)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcc
Confidence 456678888899999999999999999976
No 315
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=53.89 E-value=58 Score=23.28 Aligned_cols=89 Identities=18% Similarity=0.137 Sum_probs=48.5
Q ss_pred hHhHHHHcccHHHHHHHHHHHHhccC-CChhhhhc----------------cch----hhhhcCchhHHHhhCCCcchhH
Q 044796 12 EGNKLFAEGKYEEALLQYEVALRVAS-VPERAESA----------------SAP----EAKEGQSASEKKEVAPAPEMAE 70 (186)
Q Consensus 12 ~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~----------------~~~----~~~~~~~~~~~~~~~~~~~~~~ 70 (186)
++-.+...|.|+.|+..+++-+..-. .....+.. +.. +....+.......+...+...
T Consensus 34 laadhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~~~~~~lP~i~~l~- 112 (325)
T 3mv2_A 34 LPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVPGLD- 112 (325)
T ss_dssp SHHHHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSSCGGGCCBCCCCHH-
T ss_pred cHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCccccccccCCCCCCCHH-
Confidence 46678899999999999998765421 11111100 000 000001111111122222111
Q ss_pred HHHHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 71 LRSICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 71 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
........|.-+...|+|++|+..|+.++..
T Consensus 113 -~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~ 143 (325)
T 3mv2_A 113 -VVNEKMNEGYKNFKLNKPDIAIECFREAIYR 143 (325)
T ss_dssp -HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 1122455788888999999999999988764
No 316
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=52.85 E-value=70 Score=23.94 Aligned_cols=81 Identities=7% Similarity=0.006 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhhhcc--HHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCC
Q 044796 74 ICHSNRGICFLKLGK--FEESIKECTKALEL-----NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEF------DPSN 140 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~--~~~A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~ 140 (186)
.++.++|.+...... -..++..|++|+.. ...+...|..+|-.+++.+++.+|+..+..+-.. ..++
T Consensus 263 mALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reD 342 (489)
T 4gq4_A 263 MALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCRED 342 (489)
T ss_dssp HHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTC
T ss_pred hhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccch
Confidence 555556655432211 12356667776653 2334566777788899999999999999998653 4567
Q ss_pred hHHHHHHHHHHHHH
Q 044796 141 NQAKRTILRKLKEM 154 (186)
Q Consensus 141 ~~~~~~l~~~~~~~ 154 (186)
.+++..+-.+...+
T Consensus 343 eEiYke~~eIanel 356 (489)
T 4gq4_A 343 EEIYKEFFEVANDV 356 (489)
T ss_dssp HHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHh
Confidence 77776665544433
No 317
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=52.85 E-value=59 Score=23.06 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHH----------------h---cCcccHHHHHHHHHH-HHHhcCHHHHHHHHH
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKAL----------------E---LNPTYMKALIRRAEA-HEKLEHFEEAIADMK 131 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al----------------~---~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~ 131 (186)
++..+..+|..+...+++.+|..+|-..- + -.|.....+..++.+ +..+|+...|...|.
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~ 212 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKD 212 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 56788899999999999999988774211 1 234445555555544 678899999988888
Q ss_pred HHHh
Q 044796 132 KILE 135 (186)
Q Consensus 132 ~al~ 135 (186)
...+
T Consensus 213 ~f~~ 216 (312)
T 2wpv_A 213 IFLE 216 (312)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 318
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=52.50 E-value=30 Score=20.26 Aligned_cols=31 Identities=23% Similarity=0.143 Sum_probs=24.6
Q ss_pred HHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 5 EANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 5 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
.|......|....+.|+|++|...++++-+.
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~ 51 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEA 51 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3566677788888999999999999887543
No 319
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=52.48 E-value=47 Score=21.88 Aligned_cols=64 Identities=14% Similarity=-0.046 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALE--LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDP 138 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 138 (186)
.+|...+..+ ..+...++...|..... +....+..|...|..+...|++.+|...|+..++..-
T Consensus 81 klWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 81 KIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 6777777664 22335577777777664 4566788888999999999999999999999998664
No 320
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=50.41 E-value=56 Score=24.70 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
..++..+|.+++.+++|++|+..+++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 467788899999999999999999999864
No 321
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=50.27 E-value=33 Score=20.47 Aligned_cols=30 Identities=20% Similarity=0.024 Sum_probs=24.0
Q ss_pred HHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 6 ANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 6 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
|+.....|....+.|+|++|...++++-+.
T Consensus 37 ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~ 66 (120)
T 3l8r_A 37 ARSIVHEAFDAMREKNYILAEQKLQEANDE 66 (120)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 556667777888999999999999887543
No 322
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=50.22 E-value=30 Score=22.82 Aligned_cols=33 Identities=15% Similarity=-0.116 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhcCc
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALELNP 104 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 104 (186)
.+..|...|..+...|++.+|...|+.+++...
T Consensus 114 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 114 LSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 347888899999999999999999999998754
No 323
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=50.04 E-value=52 Score=24.66 Aligned_cols=31 Identities=10% Similarity=0.256 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
...++..+|.+++.+++|++|+..+++++..
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3467788899999999999999999998864
No 324
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=49.94 E-value=16 Score=16.36 Aligned_cols=16 Identities=13% Similarity=0.366 Sum_probs=13.1
Q ss_pred cHHHHHHHHHHHHhcC
Q 044796 88 KFEESIKECTKALELN 103 (186)
Q Consensus 88 ~~~~A~~~~~~al~~~ 103 (186)
-|++|+..|+.+++..
T Consensus 17 ayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 17 AYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4789999999988754
No 325
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=49.21 E-value=53 Score=23.40 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=23.0
Q ss_pred HHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 76 HSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 76 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
....|.-+...|+|++|+..|+.++..
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~ 131 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLS 131 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 456788888999999999999998865
No 326
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=48.65 E-value=63 Score=22.24 Aligned_cols=30 Identities=17% Similarity=0.056 Sum_probs=26.6
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
+.+..++....+.++|++.+.+++++...+
T Consensus 9 e~~v~~AkLaeqaeRyddm~~~mk~v~~~~ 38 (260)
T 1o9d_A 9 EENVYMAKLAEQAERYEEMVEFMEKVSNSL 38 (260)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHccC
Confidence 456678888999999999999999999987
No 327
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=48.45 E-value=15 Score=20.58 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=14.1
Q ss_pred HHHHHHhHhHHHHc---ccHHHHHHHHHHHHh
Q 044796 6 ANEAKLEGNKLFAE---GKYEEALLQYEVALR 34 (186)
Q Consensus 6 a~~~~~~g~~~~~~---~~~~~A~~~~~~al~ 34 (186)
|-.+.+.|...=.. |+.++|+.+|++.+.
T Consensus 16 AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~ 47 (89)
T 3eab_A 16 AFEYISIALRIDEDEKAGQKEQAVEWYKKGIE 47 (89)
T ss_dssp HHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 33444444444334 555555555555544
No 328
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=48.24 E-value=41 Score=20.81 Aligned_cols=33 Identities=15% Similarity=0.035 Sum_probs=28.1
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
..+..++..|..+...|+.+.|--.|-+-+.+.
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~ 72 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVY 72 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 567889999999999999999998888865553
No 329
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=48.10 E-value=71 Score=22.64 Aligned_cols=27 Identities=7% Similarity=-0.298 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHH
Q 044796 105 TYMKALIRRAEAHEKLEHFEEAIADMK 131 (186)
Q Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (186)
.+|..+..+|..+...|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 478889999999999999999888876
No 330
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=47.68 E-value=32 Score=23.10 Aligned_cols=57 Identities=11% Similarity=-0.057 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALEL-----NPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS 139 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 139 (186)
.+|...+... +++...|...... -.. .|...|..+...|++.+|...|+..++..-.
T Consensus 121 klWl~Ya~~~------~~p~~if~~L~~~~IG~~~Al---fYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 121 RIWMQYVNYI------DEPVELFSFLAHHHIGQESSI---FYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp HHHHHHHTTC------SCHHHHHHHHHHTTCSTTBHH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred HHHHHHHHcc------CCHHHHHHHHHHCCcchhHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 5666655531 3455666665532 233 5566788899999999999999999987644
No 331
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=52.78 E-value=4 Score=32.28 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHH
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEA 126 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 126 (186)
......|...+..|+|.-|.+..+.++..+|++..+...++.++.++|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 34456677778899999999999999999999999999999999999966553
No 332
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=45.77 E-value=49 Score=24.76 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
...++..+|.+++.+++|++|+..+++++..
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3467778888888899999999999888753
No 333
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=45.68 E-value=72 Score=22.00 Aligned_cols=32 Identities=6% Similarity=0.069 Sum_probs=28.3
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCC
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASV 38 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 38 (186)
+.+..+|...-+.++|++.+.+.+++...++.
T Consensus 32 e~lv~~AKLaeqaeRYddMv~~MK~v~~~~~e 63 (261)
T 3ubw_A 32 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVE 63 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 56777888899999999999999999998776
No 334
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=44.99 E-value=69 Score=21.64 Aligned_cols=32 Identities=6% Similarity=0.069 Sum_probs=27.6
Q ss_pred HHHHHhHhHHHHcccHHHHHHHHHHHHhccCC
Q 044796 7 NEAKLEGNKLFAEGKYEEALLQYEVALRVASV 38 (186)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 38 (186)
+.+..++....+.++|++.+.+++++...+|.
T Consensus 6 e~~v~~AklaeqaeRyddm~~~mk~v~~~~~e 37 (234)
T 2br9_A 6 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVE 37 (234)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHhcccCC
Confidence 45667888889999999999999999998765
No 335
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=44.84 E-value=4.6 Score=27.74 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=0.0
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
..|-.+...|..+-..|+|++|+.+|..+++..
T Consensus 21 ~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~L 53 (257)
T 2ymb_A 21 TAAATVLKRAVELDSESRYPQALVCYQEGIDLL 53 (257)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 456667788888889999999999999998764
No 336
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=43.17 E-value=45 Score=20.20 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=26.4
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHh
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALR 34 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~ 34 (186)
++.++.+...|..++..|++-+|-+-+-+|..
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 46788999999999999999888777666655
No 337
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=43.12 E-value=1e+02 Score=22.97 Aligned_cols=47 Identities=13% Similarity=-0.011 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhcCc--------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 044796 90 EESIKECTKALELNP--------TYMKALIRRAEAHEKLEHFEEAIADMKKILEF 136 (186)
Q Consensus 90 ~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (186)
+..+..++.|+..=| +-.-++..+|.++...|++++|....++++..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 445555666665433 23557888999999999999999999999853
No 338
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=42.71 E-value=76 Score=21.44 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHh-----cCCCChHHHHHHHHHHHHHHHHhhccccccchhhhh
Q 044796 124 EEAIADMKKILE-----FDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFKA 171 (186)
Q Consensus 124 ~~A~~~~~~al~-----~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~~ 171 (186)
+.|...|+.|++ +.|.+| ++..++.-+..+-..+++..+.|...-++
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthP-irLgLaLN~SVF~yEil~~~~~A~~lAk~ 198 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHP-IRLGLALNFSVFYYEILNSPDRACRLAKA 198 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCH-HHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCc-HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 457777887764 567666 44445543333333345665555554443
No 339
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=42.21 E-value=30 Score=22.81 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=20.2
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 044796 114 AEAHEKLEHFEEAIADMKKILEFDPSNNQAKRTILR 149 (186)
Q Consensus 114 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 149 (186)
-.++...|.+++|.+.+++...-+|++......|..
T Consensus 124 V~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~ 159 (211)
T 3bqo_A 124 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLM 159 (211)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 345677778888888877777766665554444443
No 340
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=41.45 E-value=57 Score=19.65 Aligned_cols=76 Identities=8% Similarity=-0.053 Sum_probs=46.4
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHH
Q 044796 78 NRGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS--NNQAKRTILRKLKE 153 (186)
Q Consensus 78 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~ 153 (186)
.-...++..++.+..+..++...+.-...|......+....--.+..+|..++++..+.... ...+|..+-.++.+
T Consensus 45 eASrlyf~~~n~~~m~~~L~pLh~~l~~~PeT~~E~sF~~~fG~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~~Vf~r 122 (126)
T 2npu_A 45 EASRLYFGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRR 122 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Confidence 34456668889999888887763322222334444555555556777888888888754322 23567666666655
No 341
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=41.08 E-value=98 Score=22.24 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhhccccccchhhh
Q 044796 125 EAIADMKKILEFDPSNNQAKRTILRKLKEMGNSILGRFGMSTDNFK 170 (186)
Q Consensus 125 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~A~~~~~ 170 (186)
.|+.+-.+.=...-.+++.+..+|..+.. .+++.+|..+|-
T Consensus 120 ~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~-----e~~~~~Ae~H~i 160 (336)
T 3lpz_A 120 EMIDWSKKFGDYPAGDPELHHVVGTLYVE-----EGEFEAAEKHLV 160 (336)
T ss_dssp HHHHHHHHHSSCTTCCHHHHHHHHHHHHH-----TTCHHHHHHHHT
T ss_pred HHHHHHhhcCCCCCCCHHHHHHHHHHHHc-----cCCHHHHHHHHH
Confidence 34444443222334678999999999988 677777877773
No 342
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=40.97 E-value=1.1e+02 Score=22.82 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCc--------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 044796 90 EESIKECTKALELNP--------TYMKALIRRAEAHEKLEHFEEAIADMKKILEF 136 (186)
Q Consensus 90 ~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (186)
+..+..++.|+..=| +-.-++..+|.++...|++++|....++++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 344555566655433 23567888999999999999999999999863
No 343
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=40.27 E-value=89 Score=23.45 Aligned_cols=31 Identities=10% Similarity=-0.028 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 72 RSICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 72 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
...++..+|.+++-+|+|++|+..+++++..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 3467888999999999999999999999864
No 344
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=39.65 E-value=51 Score=18.54 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
++....-|.-++..++|.+|...|+++...
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 355555666666677777777777776643
No 345
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=39.22 E-value=39 Score=17.14 Aligned_cols=48 Identities=8% Similarity=-0.022 Sum_probs=19.7
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCccc-HHHHHHHHHHHHHhcCHHHHH
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTY-MKALIRRAEAHEKLEHFEEAI 127 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~~g~~~~A~ 127 (186)
+|..--.....++|....+- +...+.. .-+-.-+...+...|+|++|+
T Consensus 12 ~AL~~TG~HcH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 12 LALAGTGHHCHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHTTTCHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHccchHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 33333334455666554433 4444443 223334456677788888775
No 346
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=38.60 E-value=39 Score=16.88 Aligned_cols=33 Identities=9% Similarity=-0.008 Sum_probs=26.1
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
+..+..+-..|...+.-.+...|++.+++++++
T Consensus 17 i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~l 49 (53)
T 2rkl_A 17 IEQIQKLAKYAISALNYEDLPTAKDELTKALDL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 345666777788888888999999999988875
No 347
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=38.35 E-value=94 Score=21.51 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=29.8
Q ss_pred hccHHHHHHHHHHHHhcCcccHH---HHHHHHHHHH-HhcCHHHHHHHHHHHHhc
Q 044796 86 LGKFEESIKECTKALELNPTYMK---ALIRRAEAHE-KLEHFEEAIADMKKILEF 136 (186)
Q Consensus 86 ~~~~~~A~~~~~~al~~~p~~~~---~~~~lg~~~~-~~g~~~~A~~~~~~al~~ 136 (186)
..-|++|....+.-++..|.+|. .-.+.+..|+ -++++++|...-++++.-
T Consensus 172 ~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 172 VEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34567777777665533555552 3334444444 467777777776666554
No 348
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=38.14 E-value=1.3e+02 Score=22.76 Aligned_cols=30 Identities=20% Similarity=0.021 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 044796 107 MKALIRRAEAHEKLEHFEEAIADMKKILEF 136 (186)
Q Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (186)
.-++..+|.++...|++++|....++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 458888999999999999999999999865
No 349
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=36.97 E-value=1.3e+02 Score=22.59 Aligned_cols=49 Identities=12% Similarity=0.223 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcCc--------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 044796 89 FEESIKECTKALELNP--------TYMKALIRRAEAHEKLEHFEEAIADMKKILEFD 137 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (186)
++.-+..++.|+..=| +-.-++..+|.++...|++++|....++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 3445555666665433 234578889999999999999999999998743
No 350
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=36.09 E-value=59 Score=18.29 Aligned_cols=56 Identities=11% Similarity=0.083 Sum_probs=37.2
Q ss_pred HHHHHHhhhccHHHHHHHHHHHHhcCcccH----HHHHHHH--HHHHHhcCHHHHHHHHHHHHh
Q 044796 78 NRGICFLKLGKFEESIKECTKALELNPTYM----KALIRRA--EAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 78 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~lg--~~~~~~g~~~~A~~~~~~al~ 135 (186)
..|..++..|+|=+|-+.++..-...|... ..+..++ ......|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 356677778999999888888887765431 2333333 334456666 8888888866
No 351
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=35.54 E-value=1.1e+02 Score=21.13 Aligned_cols=46 Identities=20% Similarity=0.103 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHh-----cCcccHH---HHHHHHHHHHH-hcCHHHHHHHHHHHHh
Q 044796 90 EESIKECTKALE-----LNPTYMK---ALIRRAEAHEK-LEHFEEAIADMKKILE 135 (186)
Q Consensus 90 ~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 135 (186)
+.|...|+.|.. +.|.+|. .-.+.+..++. ++++++|...-++++.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567777877765 4566653 33344445444 7899888876666643
No 352
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=34.46 E-value=1.2e+02 Score=23.04 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
..++..+|.+++..++|++|+..+++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467778888888889999999999988863
No 353
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=33.63 E-value=22 Score=23.42 Aligned_cols=38 Identities=11% Similarity=0.010 Sum_probs=24.9
Q ss_pred HHHHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHH
Q 044796 79 RGICFLKLGKFEESIKECTKALELNPTYMKALIRRAEA 116 (186)
Q Consensus 79 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 116 (186)
.-.++...|.|++|...+++....++++......|..+
T Consensus 123 AV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 123 AIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 34678899999999999999998877665554444444
No 354
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=33.59 E-value=1.1e+02 Score=20.55 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcC
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELN 103 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 103 (186)
..|...|..+...|++.+|...|+.+++..
T Consensus 151 lfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 151 IFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 555566666666666666666666666654
No 355
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=33.56 E-value=1.1e+02 Score=20.82 Aligned_cols=46 Identities=22% Similarity=0.086 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHh-----cCcccHH---HHHHHHHHHH-HhcCHHHHHHHHHHHHh
Q 044796 90 EESIKECTKALE-----LNPTYMK---ALIRRAEAHE-KLEHFEEAIADMKKILE 135 (186)
Q Consensus 90 ~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~-~~g~~~~A~~~~~~al~ 135 (186)
+.|...|+.|.. +.|.+|. .-.+.+..|+ -+++++.|...-++++.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567777877765 4666663 3334444444 47899988876666643
No 356
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=33.17 E-value=80 Score=18.93 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=26.5
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
+++|+..+..|...+..|.|+.|.-..+++++.
T Consensus 13 ~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Ek 45 (135)
T 1o3u_A 13 MDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEK 45 (135)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 467888888898889999998888777776654
No 357
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=33.01 E-value=74 Score=23.23 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=29.4
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
...+..++.+|..+++.|++++|.-++-.++-.-
T Consensus 95 ~~~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~ 128 (370)
T 2wxu_A 95 ESQIRKFSALARYEWQRGNYKQATFYLGEAMHYF 128 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 3456889999999999999999999999987653
No 358
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=32.46 E-value=2.3e+02 Score=23.90 Aligned_cols=61 Identities=10% Similarity=-0.082 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHhcCcccH--HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALELNPTYM--KALIRRAEAHEKLEHFEEAIADMKKILE 135 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (186)
.+-..+|.++...++ ++++..+...+..+.... .+-+.+|.++...|+-+.....+..+.+
T Consensus 456 gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e 518 (963)
T 4ady_A 456 GASLGIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE 518 (963)
T ss_dssp HHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc
Confidence 445566666665555 455666666665332211 2344556666666666555555444443
No 359
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=31.26 E-value=1.7e+02 Score=22.07 Aligned_cols=45 Identities=9% Similarity=0.082 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCChHHHHHHHH
Q 044796 105 TYMKALIRRAEAHEKLEHFEEAIADMKKILEF------DPSNNQAKRTILR 149 (186)
Q Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~ 149 (186)
.+...|..+|-.+++.+++.+|+..+..+-.. ..++.+++..+-.
T Consensus 316 ~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 366 (550)
T 3u84_A 316 EHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFE 366 (550)
T ss_dssp CCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred CCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 34566777788999999999999999888653 3456666665554
No 360
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=30.77 E-value=72 Score=17.64 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=17.7
Q ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHH
Q 044796 87 GKFEESIKECTKALELNPTYMKALIRR 113 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~~p~~~~~~~~l 113 (186)
++..+++....++++.+|++|..+..+
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LAey 50 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLAEY 50 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 345566666677777788888664433
No 361
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=30.43 E-value=1.3e+02 Score=20.65 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHh-----cCcccHH---HHHHHHHHHH-HhcCHHHHHHHHHHHHh
Q 044796 90 EESIKECTKALE-----LNPTYMK---ALIRRAEAHE-KLEHFEEAIADMKKILE 135 (186)
Q Consensus 90 ~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~-~~g~~~~A~~~~~~al~ 135 (186)
+.|...|+.|.. +.|.+|. .-.+.+..|+ -++++++|...-++++.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 567778888775 4666653 3334445544 47999998887666653
No 362
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=30.39 E-value=84 Score=18.31 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=24.5
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
++.|...+..|...+..|.|+.|.-..+++++.
T Consensus 8 l~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek 40 (122)
T 1wol_A 8 IKQAERDLEEARYAKSGGYYELACFLSQQCAEK 40 (122)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 356777777888888899998887777666543
No 363
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=30.20 E-value=78 Score=17.86 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=17.1
Q ss_pred ccHHHHHHHHHHHHhcCcccHHHHH
Q 044796 87 GKFEESIKECTKALELNPTYMKALI 111 (186)
Q Consensus 87 ~~~~~A~~~~~~al~~~p~~~~~~~ 111 (186)
+...+++....++++.+|++|..+-
T Consensus 30 ~~~~~~l~~Al~~L~~~psNPa~LA 54 (92)
T 2g0u_A 30 KDLNKQLQDAQANLTKNPSDPTALA 54 (92)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 4556666666777778888887643
No 364
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=30.12 E-value=1e+02 Score=19.21 Aligned_cols=60 Identities=8% Similarity=-0.074 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALE--LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDPS 139 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 139 (186)
.+|...+... +++...|..... +....+..|...|..+...|++.+|...|+..++....
T Consensus 72 klWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 72 SYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp HHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 5555555442 236666766664 45566888888999999999999999999999986543
No 365
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3
Probab=29.58 E-value=82 Score=22.98 Aligned_cols=36 Identities=11% Similarity=0.126 Sum_probs=30.4
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccCC
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVASV 38 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 38 (186)
...+..++.+|..+++.|++.+|.-++-.++-.-.+
T Consensus 95 ~~~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~~D 130 (370)
T 1olp_A 95 ESQTRKFATLAKNEWDKGNYEKAAWYLGQGMHYFGD 130 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhc
Confidence 345688999999999999999999999999865444
No 366
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=28.72 E-value=92 Score=18.22 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=23.9
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
++.|...+..|...+..|.|+.|.-..+++++.
T Consensus 8 ~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek 40 (127)
T 1ufb_A 8 LEQARHNLRHAQGSLGLGDYAWACFAAQQAAEA 40 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 356777777787888888888887766666543
No 367
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=27.86 E-value=13 Score=27.76 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=0.0
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhccC
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRVAS 37 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 37 (186)
++.|-.+...|...-..|+|++|+.+|..+++..-
T Consensus 8 ~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~ 42 (444)
T 2zan_A 8 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 42 (444)
T ss_dssp -----------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 35566777888888889999999999999987643
No 368
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=26.73 E-value=1.6e+02 Score=22.46 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHhc
Q 044796 73 SICHSNRGICFLKLGKFEESIKECTKALEL 102 (186)
Q Consensus 73 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 102 (186)
..++..+|.+++..++|++|...+++++..
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 467778888888889999999999988863
No 369
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.40 E-value=85 Score=23.55 Aligned_cols=31 Identities=26% Similarity=0.167 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 044796 107 MKALIRRAEAHEKLEHFEEAIADMKKILEFD 137 (186)
Q Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (186)
+++++..|.+..++|+..+|+..+.++....
T Consensus 364 AEv~Li~AEA~~~~g~~~~A~~~lN~vR~Ra 394 (478)
T 3hdx_A 364 EDITLLRAEALCALNRSTEAVSYLNMIRTNR 394 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHc
Confidence 7899999999999999999999998876653
No 370
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=25.56 E-value=2.1e+02 Score=21.34 Aligned_cols=101 Identities=12% Similarity=0.015 Sum_probs=47.8
Q ss_pred HHHhHhHHHHcccHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHhhhcc
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFLKLGK 88 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 88 (186)
+..++..+...++|.+|--++.....+-.=+..... ......+ ... ...........+......+.+-+.
T Consensus 38 l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~--~~~~~~~-------~~~-~qt~~~~ke~L~~~~i~~f~kg~~ 107 (436)
T 2yin_A 38 LYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCA--SQVMQTG-------QQH-PQTHRQLKETLYETIIGYFDKGKM 107 (436)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC------------------------CHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccC--cccccCC-------CCc-cccHHHHHHHHHHHHHHHHHhcCc
Confidence 356788888999999998888554433211100000 0000000 000 000001111334444555555667
Q ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Q 044796 89 FEESIKECTKALELNPTYMKALIRRAEAHEK 119 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 119 (186)
|+.|+..++..+........-+..++.++..
T Consensus 108 ~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~ 138 (436)
T 2yin_A 108 WEEAISLCKELAEQYEMEIFDYELLSQNLIQ 138 (436)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998876533221223344444443
No 371
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=23.65 E-value=89 Score=23.38 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=27.6
Q ss_pred hHHHHHHHhHhHHHHcccHHHHHHHHHHHHhcc
Q 044796 4 NEANEAKLEGNKLFAEGKYEEALLQYEVALRVA 36 (186)
Q Consensus 4 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 36 (186)
.+.-+.-.+|.+++..++|++|....++++...
T Consensus 189 tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 189 NTDVVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 445667778999999999999999999999753
No 372
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=23.23 E-value=1.5e+02 Score=18.75 Aligned_cols=59 Identities=17% Similarity=0.099 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 044796 74 ICHSNRGICFLKLGKFEESIKECTKALE--LNPTYMKALIRRAEAHEKLEHFEEAIADMKKILEFDP 138 (186)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 138 (186)
.+|...+... + .+...|..... +....+..|...|..+...|++.+|...|+.+++...
T Consensus 67 klWl~ya~~~---~---~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 67 NLWLKLGRLC---N---EPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHHC---S---CHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhc---C---CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 6666666553 2 35556666554 4566788888999999999999999999999998763
No 373
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=22.68 E-value=1e+02 Score=23.38 Aligned_cols=33 Identities=9% Similarity=0.213 Sum_probs=27.7
Q ss_pred hhHHHHHHHhHhHHHHcccHHHHHHHHHHHHhc
Q 044796 3 LNEANEAKLEGNKLFAEGKYEEALLQYEVALRV 35 (186)
Q Consensus 3 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 35 (186)
..+.-++-.+|.+++..++|++|+...++++..
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345567777899999999999999999999964
No 374
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=22.60 E-value=1.8e+02 Score=19.53 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=27.9
Q ss_pred HHHhhhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Q 044796 81 ICFLKLGKFEESIKECTKALELNPTYMKALIRRAEAHEK 119 (186)
Q Consensus 81 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 119 (186)
.++...|.|++|...+++....+|.+......|..+-..
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 456778888888888888888777666666656555433
No 375
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=21.60 E-value=2.5e+02 Score=20.76 Aligned_cols=86 Identities=16% Similarity=0.112 Sum_probs=48.4
Q ss_pred HHHHhHhHHHHcc---cHHHHHHHHHHHHhccCCChhhhhccchhhhhcCchhHHHhhCCCcchhHHHHHHHHHHHHHHh
Q 044796 8 EAKLEGNKLFAEG---KYEEALLQYEVALRVASVPERAESASAPEAKEGQSASEKKEVAPAPEMAELRSICHSNRGICFL 84 (186)
Q Consensus 8 ~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 84 (186)
....+-..++..| +|.-|+..+...-+++|.....-. ..........+..... +. ..-.|..+|-++.
T Consensus 237 LQq~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~---l~L~~~AI~sa~~yY~-n~-----HvYPYtylgGy~y 307 (472)
T 3re2_A 237 LQQELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPA---EELFKEAITVAKREYS-DH-----HIYPYTYLGGYYY 307 (472)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCH---HHHHHHHHHHHHHHST-TC-----CSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCH---HHHHHHHHHHHHHHhc-cC-----Cccchhhhhhhhh
Confidence 3344445556555 678888888888888776322110 0000000011111111 11 1145677888999
Q ss_pred hhccHHHHHHHHHHHHhc
Q 044796 85 KLGKFEESIKECTKALEL 102 (186)
Q Consensus 85 ~~~~~~~A~~~~~~al~~ 102 (186)
+.+++.+|+..+-.+-..
T Consensus 308 R~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 308 RKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHH
Confidence 999999999999887653
No 376
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=21.52 E-value=2.5e+02 Score=20.81 Aligned_cols=23 Identities=17% Similarity=0.133 Sum_probs=19.7
Q ss_pred HHHhHhHHHHcccHHHHHHHHHH
Q 044796 9 AKLEGNKLFAEGKYEEALLQYEV 31 (186)
Q Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~ 31 (186)
+..++..+...|+|.+|.-++-.
T Consensus 14 l~~La~~h~~~~n~~EAa~cl~~ 36 (428)
T 2wm9_A 14 LDSMARIHVKNGDLSEAAMCYVH 36 (428)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHH
Confidence 56788999999999999988863
No 377
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.22 E-value=2.2e+02 Score=21.40 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhcCc--------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 044796 89 FEESIKECTKALELNP--------TYMKALIRRAEAHEKLEHFEEAIADMKKIL 134 (186)
Q Consensus 89 ~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (186)
++..+..++.|+..=| +-.-++..+|.++...+++++|....++++
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Done!