BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044799
(304 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147798084|emb|CAN67257.1| hypothetical protein VITISV_039435 [Vitis vinifera]
Length = 507
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 14/241 (5%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV L G ++ D+ +I + P ++ + ++S+Q+LI++L
Sbjct: 227 IVTLAVHPSGCNVFIRLTEACDANQLSQILSKLILPPSTIIRVSHDPIGSKSIQRLIQVL 286
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
SP + V++A F ++M ++ + VI +CL L ++NE LY AA+ LATH
Sbjct: 287 RRSPLVVPVVTALAAGFYELMKDQQGAMVISRCLALLSSEQNEELYRAAILPCVALATHA 346
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
+GC++LN+FIN + GP R LL I+ + FLS+DP GN+VVQH+L L ++ KIC L
Sbjct: 347 KGCIALNSFINNVIGPYRDLLLHKITDNTVFLSQDPRGNFVVQHILELHHPVFTSKICHL 406
Query: 221 LKGKFEELSLLRCGSHLVEKYQRPSIFT------------P--CQHKYGNFVIQQALRVT 266
L+G + LS+ + GSH+VEK + + P ++GN+VIQ ALRVT
Sbjct: 407 LQGYYVRLSVQKSGSHIVEKCLKSHWMSFAVKELTTSGRLPQLAHDQFGNYVIQTALRVT 466
Query: 267 K 267
K
Sbjct: 467 K 467
>gi|255553119|ref|XP_002517602.1| RNA binding protein, putative [Ricinus communis]
gi|223543234|gb|EEF44766.1| RNA binding protein, putative [Ricinus communis]
Length = 471
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 155/301 (51%), Gaps = 60/301 (19%)
Query: 27 TYGKNALLAQPDYD-IVLLGKTEGGSLFLQKMLSGKDSTITY-----KIFEAVYKYPFD- 79
T G++++ + D ++ T+ GS +LQ +L+ DS +T K+ +V P
Sbjct: 129 TVGQDSIPGMQNQDSFIMFASTQQGSEYLQDLLATSDSYLTTSKILDKVTASVVGIPVIN 188
Query: 80 -LMTDGYGCHL------------------------------------ARSMQKLIKLLVG 102
LM D +G H+ ++ ++KLIK +
Sbjct: 189 YLMVDQHGYHVCSKLIDSCNDIQLTLILERITKNTEQFVRICCAINGSKMIKKLIKKVKR 248
Query: 103 SPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRG 162
S IS + + Y+ F + ++ S V++ C++ LD Q+N +LY AA++H LAT G
Sbjct: 249 SCLISYLTVSLYKGFYQLAINQIGSYVVVFCMDCLDIQQNALLYEAAISHCLILATDAIG 308
Query: 163 CVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
CVS N FI+ ++G RR LL+LIS +A FLS+DPSGN+VVQ VLGL + + KI + LK
Sbjct: 309 CVSANKFIDRIQGSRRQTLLELISDNAVFLSQDPSGNHVVQKVLGLENPIINAKIGAQLK 368
Query: 223 GKFEELSLLRCGSHLVEK--------YQRPSIFTP--------CQHKYGNFVIQQALRVT 266
G + LS + GSH+VEK Y + T + ++GN+VIQ+AL+VT
Sbjct: 369 GHYVRLSFQKWGSHVVEKCLVSQAMVYAVQDLLTCGSSQLLQIARDQFGNYVIQKALKVT 428
Query: 267 K 267
K
Sbjct: 429 K 429
>gi|255544718|ref|XP_002513420.1| conserved hypothetical protein [Ricinus communis]
gi|223547328|gb|EEF48823.1| conserved hypothetical protein [Ricinus communis]
Length = 483
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 58/289 (20%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFD------LMTDGYGCHL------ 89
++ T+ GS LQ +L+ +S K+ E V + LM D YGCH+
Sbjct: 154 IMFASTQQGSKHLQDLLAYSNSDFASKLLETVTASVVEIPVINYLMVDQYGCHVCSKLID 213
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
++ ++KLIK + S I + + Y+ F
Sbjct: 214 SCNDKQLALILERITRNDEQFVQICCNINGSKMIKKLIKKVKRSCLICYMTVSLYKGFCQ 273
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
+ ++ S V++ C++ LD +++ +LY AA++H LAT GCVS+NNFI+ ++G R
Sbjct: 274 LAINQIGSYVVVFCMDCLDVKQSALLYEAAISHCLILATDATGCVSINNFIDRIQGSHRQ 333
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
LL+LIS +A FLS+DPSGN+VVQ VL L + + KI + LKG + LS + GSH+VE
Sbjct: 334 TLLELISDNAVFLSQDPSGNHVVQKVLELENPIINAKIGAQLKGHYARLSFQKWGSHVVE 393
Query: 240 K--YQRPSIFT-----PC---------QHKYGNFVIQQALRVTKGFQMT 272
K +P ++ C + ++GN+VIQ+AL+VTK +T
Sbjct: 394 KCLVSQPIVYVVQDLLTCGSSQLSQIARDQFGNYVIQKALKVTKKKNIT 442
>gi|224117628|ref|XP_002317626.1| predicted protein [Populus trichocarpa]
gi|222860691|gb|EEE98238.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 140/265 (52%), Gaps = 27/265 (10%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMT------- 82
+N + + Y+ VL + G ++ L+ ML + ++ +A+ L+T
Sbjct: 197 RNPEITREIYNKVLALSSRGIAVVLELMLDQHGWHVFGELIDALNYQQLKLITYEITKNL 256
Query: 83 DGY-----GCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETL 137
D + H + S++K+I+LL SP ++LV++ F +M ++ S + +C L
Sbjct: 257 DNFVSLTLDTHGSNSIRKVIRLLRRSPLVTLVMNNLRAAFFTIMTNRIGSYAVSECFNQL 316
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
+ N +LY AA+ +LA G ++L IN ++G +R LLD++S++ FLS+DP
Sbjct: 317 SAEDNRLLYEAAIECCLDLAIDHEGSLALIRVINTIQGLQRYRLLDILSTYVAFLSQDPK 376
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---------------YQ 242
GNYVVQ V+ L + +++KIC L+G + +SL + GSH+ EK
Sbjct: 377 GNYVVQKVISLNNPLFTQKICHHLRGYYGTISLQKGGSHIAEKCLDTEWKSWVIEDFLSN 436
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTK 267
++ + ++GN+VIQ+AL+VTK
Sbjct: 437 TNTLLQVAKDEFGNYVIQKALKVTK 461
>gi|224056741|ref|XP_002299000.1| predicted protein [Populus trichocarpa]
gi|222846258|gb|EEE83805.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 112/198 (56%), Gaps = 15/198 (7%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
+ H + ++K+I++L S IS V + F +M ++ S V+ +CL L + N+
Sbjct: 258 FHTHGSNLIKKVIRILRRSHLISFVTNNLCAAFLLIMTNRIGSYVVSECLNHLRAEDNKA 317
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
LY AA+ +LA G ++L IN ++G +R LL+++S +A FLS+DP GNYV+Q
Sbjct: 318 LYEAAITWCLDLAIDHEGSIALIRVINTIQGLQRYRLLNILSRNAVFLSQDPEGNYVIQK 377
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---------------YQRPSIFTP 249
V+ L + +++ +C LL G +E +SL + GSH+VEK ++
Sbjct: 378 VISLNNPLFTQNVCHLLIGHYETISLQKGGSHIVEKCLDTEWKGWIIENFLSNTNTLLHV 437
Query: 250 CQHKYGNFVIQQALRVTK 267
+ +GN+VIQ+AL+VTK
Sbjct: 438 AKDAFGNYVIQKALKVTK 455
>gi|356551678|ref|XP_003544201.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 622
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 16/246 (6%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D+V L G+ +QK+L ++ + K P L+ H R +QKLI
Sbjct: 345 DVVELMVDPFGNYLVQKLLDVGGDDERLQVVSMLTKEPGQLIKTSLNIHGTRVVQKLITT 404
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+ I++++SA F ++ + VI +CL+ + NE ++ AA E+ATH
Sbjct: 405 VDSRKQIAMLMSAIQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATH 464
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC L I+ G + L+ I H L++DP GNYVVQ+++ + + S K+ S
Sbjct: 465 QHGCCVLQRCIDYSTGKYQDKLVKEICRHGLLLAQDPFGNYVVQYIIEMENPTASFKLHS 524
Query: 220 LLKGKFEELSLLRCGSHLVEK----------------YQRPSIFTPCQHKYGNFVIQQAL 263
KG + LS+ + SH+VEK P Q YGN+V+Q+AL
Sbjct: 525 QFKGNYTNLSMQKYSSHVVEKCLVHLAEIKSRIVQEFLSFPHFEQLLQDLYGNYVVQRAL 584
Query: 264 RVTKGF 269
VTKGF
Sbjct: 585 GVTKGF 590
>gi|297793565|ref|XP_002864667.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297310502|gb|EFH40926.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 34/271 (12%)
Query: 43 LLGKTEGGSLFLQKMLSGKDSTITYK---IFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
L+ EG S F + M+S D T+ + + + Y ++T+ YG +R +QKL+
Sbjct: 48 LMTDGEGVSYF-KGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYG---SRRVQKLLG- 102
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+L +A RRF + K A+ V I+ + D++ + +Y + H +LA
Sbjct: 103 -KSDDADALFCAAILRRFLHITTDKYATYVTIRAMVVFDKEMKKAMYEHILYHALDLACD 161
Query: 160 VRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
GC++LN+ I + P R LLDL++S+A LS D SGN+VVQHVL L DL+ + I
Sbjct: 162 QHGCIALNDIITDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIA 221
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQRP-----------------SIFTPCQHKYGNFVIQQ 261
L G +LS + GS++VEK ++ ++++GNFV+ +
Sbjct: 222 VNLYGHCIDLSFKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVK 281
Query: 262 ALRVTKGFQMTERNIIQELGQSSFIQGIVPF 292
ALR TK M++ ++ L +Q ++PF
Sbjct: 282 ALRFTKA--MSKIDLFWGL-----VQKLMPF 305
>gi|297790088|ref|XP_002862953.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297308739|gb|EFH39212.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 34/271 (12%)
Query: 43 LLGKTEGGSLFLQKMLSGKDSTITYK---IFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
L+ EG S F + M+S D T+ + + + Y ++T+ YG +R +QKL+
Sbjct: 48 LMTDGEGVSYF-KGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYG---SRRVQKLLG- 102
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+L +A RRF + K A+ V I+ + D++ + +Y + H +LA
Sbjct: 103 -KSDDADALFCAAILRRFLHITTDKYATYVTIRAMVVFDKEMKKAMYEHILYHALDLACD 161
Query: 160 VRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
GC++LN+ I + P R LLDL++S+A LS D SGN+VVQHVL L DL+ + I
Sbjct: 162 QHGCIALNDIITDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIA 221
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQRP-----------------SIFTPCQHKYGNFVIQQ 261
L G +LS + GS++VEK ++ ++++GNFV+ +
Sbjct: 222 VNLYGHCIDLSFKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVK 281
Query: 262 ALRVTKGFQMTERNIIQELGQSSFIQGIVPF 292
ALR TK M++ ++ L +Q ++PF
Sbjct: 282 ALRFTKA--MSKIDLFWGL-----VQKLMPF 305
>gi|9454526|gb|AAF87849.1|AC073942_3 Contains similarity to RNA binding protein PufA from Dictyostelium
discoideum gi|5106561 and contains multiple
Pumilio-family RNA binding PF|00806 domains [Arabidopsis
thaliana]
Length = 514
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +I V P L+ + R +Q+L++ + ISLV
Sbjct: 247 GNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLV 306
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
SA F +++ + VI +CL+ L + NE ++ A ++ATH GC L
Sbjct: 307 KSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKC 366
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G +R L+ IS ++ FL++DP GNY VQ VL L D + + LKG + ELS
Sbjct: 367 IAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELS 426
Query: 230 LLRCGSHLVEK------YQRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
+ + SH+VE+ RP I Q Y NFVIQ AL VTKG
Sbjct: 427 MQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKG 481
>gi|15219849|ref|NP_173643.1| protein pumilio 8 [Arabidopsis thaliana]
gi|313471411|sp|Q9LM20.2|PUM8_ARATH RecName: Full=Putative pumilio homolog 8, chloroplastic;
Short=APUM-8; Short=AtPUM8; Flags: Precursor
gi|332192094|gb|AEE30215.1| protein pumilio 8 [Arabidopsis thaliana]
Length = 515
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +I V P L+ + R +Q+L++ + ISLV
Sbjct: 248 GNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLV 307
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
SA F +++ + VI +CL+ L + NE ++ A ++ATH GC L
Sbjct: 308 KSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKC 367
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G +R L+ IS ++ FL++DP GNY VQ VL L D + + LKG + ELS
Sbjct: 368 IAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELS 427
Query: 230 LLRCGSHLVEK------YQRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
+ + SH+VE+ RP I Q Y NFVIQ AL VTKG
Sbjct: 428 MQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKG 482
>gi|297845242|ref|XP_002890502.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
gi|297336344|gb|EFH66761.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 131/311 (42%), Gaps = 54/311 (17%)
Query: 12 RGIGIANLSTSIGPGTYGKNALLAQPDYD--IVLLGKTEGGSLFLQKMLSGKDSTITYKI 69
R G+ L G + +L ++ + L+ K + G FLQ++ + I
Sbjct: 182 RKSGVGTLFDDQGSSSNTNQSLPKVSEFQGYVYLMAKDQHGCRFLQRIFEDGSALDAMVI 241
Query: 70 FEAVYKYPFDLMTDGYGCHL------------------------------------ARSM 93
F V + +LM D +G +L R +
Sbjct: 242 FNEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVV 301
Query: 94 QKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHF 153
Q+L++ + ISLV A F +++ + VI +CL+ L + NE ++ A
Sbjct: 302 QRLVESIKTRKQISLVKLALRPGFLNLIRDLNGNHVIQRCLKCLSTKDNEFIFEDATKFC 361
Query: 154 RELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKY 213
++ATH GC L I G +R L+ IS ++ FL++DP GNY VQ VL L D
Sbjct: 362 IDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSA 421
Query: 214 SEKICSLLKGKFEELSLLRCGSHLVEK------YQRPSIFTP----------CQHKYGNF 257
+ + LKG + ELS+ + SH+VE+ RP I Q Y NF
Sbjct: 422 IAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANF 481
Query: 258 VIQQALRVTKG 268
VIQ AL VTKG
Sbjct: 482 VIQAALAVTKG 492
>gi|145354443|ref|XP_001421494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581731|gb|ABO99787.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 326
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 20/215 (9%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
+L+T H R++QKLI++L +SL +A ++ + VI +CL+ L
Sbjct: 84 ELVTIALNTHGTRAVQKLIEMLNSPEEVSLATNALRPGVVTLIKDLNGNHVIQRCLQRLS 143
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
+ N+ +Y AA H E+ATH GC L I+ +R L+ I+S A LS+DP G
Sbjct: 144 SEDNQFIYDAAKVHCVEIATHRHGCCVLQRCIDHAIDEQRRPLVLEIASQALVLSQDPFG 203
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------------------ 240
NYVVQ++L LG + ++ + L G + ELS+ + S++VEK
Sbjct: 204 NYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFSSNVVEKCLKLADASLEKNRNTVVR 263
Query: 241 --YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
Q P + YGN+V+Q L VTKG TE
Sbjct: 264 EIMQSPLLDRLLMDPYGNYVVQSTLTVTKGVLHTE 298
>gi|356518481|ref|XP_003527907.1| PREDICTED: putative pumilio homolog 10-like [Glycine max]
Length = 668
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
++V L G+ +QK+L +I + +P L+ H R +QKLI+
Sbjct: 391 NVVELMIDSFGNYLVQKLLDVCTDDQRLQIVLMLTNHPAQLVRVSLNTHGTRVVQKLIET 450
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
L + +SLV SA F D++ + +I +CL+ L Q N+ ++ AA+ E+ATH
Sbjct: 451 LTSTEQVSLVKSAIQPGFLDLIKDLNGNHLIQRCLQCLSCQDNQFIFDAAVKFCVEIATH 510
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC L I+ G R L+ I H L++D GNYVVQ+V+ S K+ S
Sbjct: 511 QHGCFVLQRCIHHSVGKNRDKLVTEICKHGLLLAQDAFGNYVVQYVIESDTAAVSAKLLS 570
Query: 220 LLKGKFEELSLLRCGSHLVEKYQR----------------PSIFTPCQHKYGNFVIQQAL 263
K F LS + SH+VEK + P Q +Y N+VIQ AL
Sbjct: 571 QFKENFVMLSTQKFSSHVVEKCLQHIGDSRSRIVRELLSVPRFEQLLQDQYANYVIQSAL 630
Query: 264 RVTKG 268
TKG
Sbjct: 631 LFTKG 635
>gi|297793151|ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 22 SIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLM 81
S+ P Y LA+ I L K + G FLQ++ + KD IF+ + Y +LM
Sbjct: 268 SLQPQKYNS---LAEARGKIYYLAKDQHGCRFLQRIFAEKDGNDIEMIFDEIIDYISELM 324
Query: 82 TDGYGCHL------------------------------------ARSMQKLIKLLVGSPC 105
D +G +L R++QK+++
Sbjct: 325 IDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEE 384
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
IS++ISA +++ + + V+ +CL+ L + L+ AA+ H +LAT GC
Sbjct: 385 ISIIISALKHGIVNLIKNVNGNHVVQRCLQYLLPHCGKFLFEAAITHCVDLATDRHGCCV 444
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L + G ++ L+ I+S+A LS+DP GNYV+Q+V L + +I L+G +
Sbjct: 445 LQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNY 504
Query: 226 EELSLLRCGSHLVEK-------YQRPSIFTPCQH----------KYGNFVIQQALRVTKG 268
ELS+ +C S++VEK R I + YGN+VIQ ALR +KG
Sbjct: 505 TELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALRQSKG 564
>gi|356510185|ref|XP_003523820.1| PREDICTED: uncharacterized protein LOC100784921 [Glycine max]
Length = 653
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
++V L G+ +QK+L +I + +P L+ H R +QKLI+
Sbjct: 376 NVVELMIDSFGNYLVQKLLDVCTDDQLLQIVLLLTNHPTQLVRISLNTHGTRVVQKLIET 435
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
L +SLV SA F D++ + VI +CL+ Q N+ ++ AA+ E+ATH
Sbjct: 436 LTSDEQVSLVKSAIQPGFLDLIKDLNGNHVIQRCLQCFSCQDNQFIFDAAVKFCVEIATH 495
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC L I+ G R L+ I H L++D GNYVVQ+V+ S K+ S
Sbjct: 496 RHGCCVLQCCIHHSTGKNRDKLVTEICKHGLLLAQDAFGNYVVQYVIESDTPAVSVKLLS 555
Query: 220 LLKGKFEELSLLRCGSHLVEK------YQRPSIF-----TP-----CQHKYGNFVIQQAL 263
KG F LS + SH+VEK RP I P Q Y N+VI+ AL
Sbjct: 556 QFKGSFVILSTQKFSSHVVEKCLKHIGNSRPRIVGELTSVPRFEQLLQDPYANYVIRSAL 615
Query: 264 RVTKG 268
TKG
Sbjct: 616 LFTKG 620
>gi|308812071|ref|XP_003083343.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
gi|116055223|emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
Length = 340
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
+L+T H R++QKLI++L +SL +A ++ + VI +CL+ L
Sbjct: 96 ELVTIALNTHGTRAVQKLIEMLNSPEEVSLATTALRPGVVTLIKDLNGNHVIQRCLQRLS 155
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
N+ +Y AA H E+ATH GC L I+ +R L+ I+S A LS+DP G
Sbjct: 156 CDDNQFIYDAAKVHCVEIATHRHGCCVLQRCIDHATEEQRRPLVHEIASQALVLSQDPFG 215
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------------------ 240
NYVVQ++L LG + ++ + L G + ELS+ + S++VEK
Sbjct: 216 NYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFSSNVVEKCLKLADASLEKNRNTVVR 275
Query: 241 --YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
Q P + YGN+V+Q L VTKG TE
Sbjct: 276 EIMQSPLLDRLLMDPYGNYVVQSTLTVTKGVLHTE 310
>gi|356557551|ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 770
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L D ++ V + P L+ H R +QK+I+ L
Sbjct: 492 VVELMMNPFGNYLMQKLLDVCDENQRMQMILMVTEEPGQLVRISLNTHGTRVVQKVIETL 551
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
ISLV++A F ++ + V+ CL+ L + N+ +++AA + ++ATH
Sbjct: 552 KTRQQISLVVAALEPGFLALIKDLNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQ 611
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L I RG R L++ IS++A L++D GNYVVQ +L L + +
Sbjct: 612 HGCCVLQRCIGHSRGEHREKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQ 671
Query: 221 LKGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQAL 263
+GK+ LS+ + GSH+VEK P Q + N+VIQ A+
Sbjct: 672 FEGKYVHLSMQKFGSHVVEKCLAVFNDENRSRVIHELLSAPHFEQLLQDPHANYVIQSAV 731
Query: 264 RVTKG 268
R ++G
Sbjct: 732 RHSEG 736
>gi|356550783|ref|XP_003543763.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 623
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 20/247 (8%)
Query: 40 DIVLLGKTEGGSLFLQKMLS--GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI 97
D+V L G+ +QK+L G+D + ++ + + P L+ H R +QKLI
Sbjct: 346 DVVELMIDPFGNYLVQKLLDVCGEDERL--QVVSMLTEEPGQLVKTSLNLHGTRVVQKLI 403
Query: 98 KLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELA 157
+ I+++ SA F ++ + VI +CL+ + NE ++ AA E+A
Sbjct: 404 TTVDSRKQIAMLRSAIQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIA 463
Query: 158 THVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKI 217
TH GC L I+ G + L+ I H L++DP GNYVVQ+++ + + S K+
Sbjct: 464 THQHGCCVLQRCIDYSTGKYKDMLVKEICRHGHLLAQDPFGNYVVQYIIEMENPSASLKL 523
Query: 218 CSLLKGKFEELSLLRCGSHLVEK----------------YQRPSIFTPCQHKYGNFVIQQ 261
S KG + LS+ + SH+VEK P + Q Y N+V+Q+
Sbjct: 524 HSQFKGNYANLSMQKFSSHVVEKCLVHIVEIRSRIVQELSSFPHLERLLQDPYANYVVQR 583
Query: 262 ALRVTKG 268
AL VTKG
Sbjct: 584 ALGVTKG 590
>gi|22327888|ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName: Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis thaliana]
Length = 596
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 138/312 (44%), Gaps = 56/312 (17%)
Query: 10 LNRGIGIANLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKI 69
LN + ++ + S+ P Y +A+ I L K + G FLQ++ S KD I
Sbjct: 254 LNEDLTMSLNNLSLQPQKYNS---IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMI 310
Query: 70 FEAVYKYPFDLMTDGYGCHL------------------------------------ARSM 93
F + Y +LM D +G +L R++
Sbjct: 311 FNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAV 370
Query: 94 QKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHF 153
QK+++ IS++ISA ++ + + V+ +CL+ L + L+ AA+ H
Sbjct: 371 QKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHC 430
Query: 154 RELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKY 213
ELAT GC L + G ++ L+ I+S+A LS+DP GNYV+Q+V L
Sbjct: 431 VELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWA 490
Query: 214 SEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIFTPCQH----------KYGN 256
+ +I L+G + ELS+ +C S++VEK R I + YGN
Sbjct: 491 TFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGN 550
Query: 257 FVIQQALRVTKG 268
+VIQ AL+ +KG
Sbjct: 551 YVIQAALKQSKG 562
>gi|356528751|ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
Length = 763
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L D +I V + P L+ H R +QKLI+ L ISLV
Sbjct: 494 GNYLMQKLLDVCDEKQRMQIILMVTEEPGQLVRISLNIHGTRVVQKLIETLKTRQQISLV 553
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
++A F ++ + V+ CL+ L + N+ +++AA + ++ATH GC L
Sbjct: 554 VAALEPGFLALIKDLNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRC 613
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I RG R L++ IS++A L++D GNYVVQ +L L + + + K+ LS
Sbjct: 614 IGHSRGEHREKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFERKYVHLS 673
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ + GSH+VEK P Q + N+VIQ ALR ++G
Sbjct: 674 MQKFGSHVVEKCLAVFNDENQSRVIHELLSAPHFEQLLQDPHANYVIQSALRHSEG 729
>gi|357489613|ref|XP_003615094.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516429|gb|AES98052.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 712
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 110/245 (44%), Gaps = 16/245 (6%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
++V L G+ +QK+L +I + K P L+ + H RS+QKLI
Sbjct: 435 NVVELMMDPFGNYLVQKLLEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLIST 494
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
L I+LV SA F D++ + VI +CL Q NE ++ AA ++ATH
Sbjct: 495 LKSRRQIALVRSAILPGFLDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATH 554
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC L I+ +G L+ I H L++DP GNYV+Q+++ L K+
Sbjct: 555 QHGCCVLQRCIDFSKGKSLEKLVKEICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTP 614
Query: 220 LLKGKFEELSLLRCGSHLVEK----------------YQRPSIFTPCQHKYGNFVIQQAL 263
KG + LS + SH+VEK P Q Y N+V+Q+AL
Sbjct: 615 QFKGNYVILSTQKFSSHVVEKCLIYIVETRARIVQELLSVPHFERLLQDPYANYVVQKAL 674
Query: 264 RVTKG 268
TKG
Sbjct: 675 EYTKG 679
>gi|384494806|gb|EIE85297.1| hypothetical protein RO3G_10007 [Rhizopus delemar RA 99-880]
Length = 416
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD-GYGCHLARSMQKLIK 98
+I LL K + G +LQK L + IF VY + +LMT+ H R++Q++I+
Sbjct: 102 EIYLLCKDQNGCRYLQKKLEETNLEQREIIFNQVYPHFVELMTEISLNMHGTRAVQRMIE 161
Query: 99 LLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
L+ I ++ A ++ + VI KCL + + +Y A + E+AT
Sbjct: 162 LISLDEQIQAIVKAFSPIVVTLIKDINGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVAT 221
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
H GC L I+ + L+D I SHA L +DP GNYVVQ+VL LGD K+S+++
Sbjct: 222 HRHGCCVLQRCIDYSANHQTKQLVDEIISHALTLVQDPYGNYVVQYVLELGDAKFSDRLI 281
Query: 219 SLLKGKFEELSLLRCGSHLVEK 240
G +LS+ + S+++EK
Sbjct: 282 RQFIGNLSKLSIQKYSSNVMEK 303
>gi|384252508|gb|EIE25984.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 380
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 120/283 (42%), Gaps = 55/283 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
++ + K + G FLQ+ + V ++ +LM D +G
Sbjct: 64 VMAVAKDQNGCRFLQRKFDEGGPAAIQAVLPEVLEHLIELMMDPFGNYLIQKLLDRCSED 123
Query: 87 ---------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE 125
H R++QKLI+ L ++LV A ++
Sbjct: 124 QRLAVLKKAAERKELVQVALNTHGTRAVQKLIETLTSREQVALVTDALRGGVVSLIRDLN 183
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI +CL+ L + ++ +Y AA H ++ATH GC L I+ P++ L+D I
Sbjct: 184 GNHVIQRCLQRLGPEDSQFVYDAAAAHTMDIATHRHGCCVLQRCIDFATPPQKRRLVDQI 243
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
+SHA LS+DP GNYVVQ+VL LG + +E I L G + EL+ + S++VEK
Sbjct: 244 TSHALPLSQDPFGNYVVQYVLELGHSEATESIMRQLCGHYPELAQQKFSSNVVEKCLKLG 303
Query: 241 ---------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
P + Q Y N+V+Q AL V+
Sbjct: 304 GQSLAEMRERVIRELLNSPLMPRLLQDPYANYVLQSALSVSSA 346
>gi|357151863|ref|XP_003575930.1| PREDICTED: pumilio homolog 12-like [Brachypodium distachyon]
Length = 767
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L G +I V K P L+ H R++QK+I+ + +S V
Sbjct: 490 GNYLVQKLLEGCSEDQRMRILCEVTKMPGQLIAVSCNMHGTRAVQKIIETINSPDQVSKV 549
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA +M S V +CL+ L + L AA H+ ELATH +GC +
Sbjct: 550 VSALSPGAMHLMLDPNGSHVANRCLQKLLPESKVFLLDAATLHYLELATHQQGCCIIQKC 609
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I ++ LL I S A LS D GNYV+Q +L + KI L+G F LS
Sbjct: 610 IEHSNDEQKYSLLSNIISSALTLSDDQFGNYVIQSILNHNIGWATCKIVDELEGHFGYLS 669
Query: 230 LLRCGSHLVEKYQRPSIFTPCQHK---------------------YGNFVIQQALRVTKG 268
+ +CGSH+VE R + QHK +GNFVIQ AL KG
Sbjct: 670 MQKCGSHVVENCLRQAP----QHKRDRIIGELMNDPKLPHIMVDQFGNFVIQTALEHCKG 725
>gi|297796981|ref|XP_002866375.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297312210|gb|EFH42634.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 136/268 (50%), Gaps = 34/268 (12%)
Query: 47 TEGGSL-FLQKMLSGKDSTITYK---IFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG 102
T+G ++ + ++M+S D T+ + + + Y ++T+ YG +R +QKL+
Sbjct: 50 TDGEAVSYFREMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYG---SRRVQKLLG--KS 104
Query: 103 SPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRG 162
+ +A RRF + K AS V I+ + D++ + +Y + H ++A G
Sbjct: 105 DEVDAFFCAAILRRFLHITTDKYASYVTIRGMVVFDKEMKKPMYEHILYHALDIACDQHG 164
Query: 163 CVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL 221
C++LN+ I + P R LLDL++S+A LS D SGN+VVQHVL L +L+ I L
Sbjct: 165 CIALNDIITDADDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYELRCIHNIAVNL 224
Query: 222 KGKFEELSLLRCGSHLVEKYQRP-----------------SIFTPCQHKYGNFVIQQALR 264
G +LS + GS++VEK ++ ++++GNFV+ +ALR
Sbjct: 225 FGHCIDLSFKKYGSYIVEKLLEAEESMLVVVVELLDCDGDTLMRLARNEFGNFVVVKALR 284
Query: 265 VTKGFQMTERNIIQELGQSSFIQGIVPF 292
TK M++ ++ L +Q ++PF
Sbjct: 285 FTKA--MSKIDLFWGL-----VQKLMPF 305
>gi|302844187|ref|XP_002953634.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300261043|gb|EFJ45258.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 271
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
+L+T H R++QKLI+ L ++ I A ++ + V+ +CL+ L
Sbjct: 30 ELVTVALNTHGTRAVQKLIETLSSREQRAIAIEALRPGVVSLIKDLNGNHVVQRCLQRLG 89
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
+ ++ +Y AA+ E+ATH GC L I+ ++ L+ I++HA LS+D G
Sbjct: 90 PEDSQFIYDAAVAQCVEVATHRHGCCVLQRCIDFATPAQKQALVQEIANHALVLSQDAFG 149
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--------YQRPSI---- 246
NYVVQ+VL LG L+ ++ S L+G F LSL + S++VE+ +R +I
Sbjct: 150 NYVVQYVLELGHLETCTQVVSALRGSFSSLSLQKFSSNVVERCLKLGGMDAEREAIVREL 209
Query: 247 FTPC------QHKYGNFVIQQALRVTKG 268
P Q +GN+VIQ AL VT G
Sbjct: 210 IAPTSLSRLLQDGFGNYVIQSALSVTSG 237
>gi|310798475|gb|EFQ33368.1| hypothetical protein GLRG_08647 [Glomerella graminicola M1.001]
Length = 802
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 50/273 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L ++ + I+ ++ +LMTD +G C
Sbjct: 384 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 443
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + I ++I+A + +++ +
Sbjct: 444 ERTVLIQNAAADMVRIALNQHGTRALQKMIEFVTTPTQIEMIINALRFQVVELIQDLNGN 503
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L Q + ++ A H ++ TH GC L I+ G ++ L+ I+
Sbjct: 504 HVIQKCLNKLSAQDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGDQKTWLIAKITE 563
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQR 243
HA L +DP GNYVVQ+++ L + ++E I + + + +LS + S+++EK Q
Sbjct: 564 HAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFQNRIGQLSRHKFSSNVIEKCLRCSQE 623
Query: 244 PS-------IFTPCQ------HKYGNFVIQQAL 263
PS + TP + Y N+VIQ AL
Sbjct: 624 PSRDMIVEELLTPGEIERLLRDSYANYVIQTAL 656
>gi|15238618|ref|NP_200819.1| pumilio 18 [Arabidopsis thaliana]
gi|75335543|sp|Q9LVG3.1|PUM18_ARATH RecName: Full=Pumilio homolog 18; Short=APUM-18; Short=AtPUM18
gi|8777350|dbj|BAA96940.1| unnamed protein product [Arabidopsis thaliana]
gi|67633898|gb|AAY78873.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332009896|gb|AED97279.1| pumilio 18 [Arabidopsis thaliana]
Length = 327
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 36/296 (12%)
Query: 19 LSTSIGPGTYGKNALLAQPDYDIVLLGKTEG-GSLFLQKMLSGKDSTITYK---IFEAVY 74
+S SI P + A A P + + T+G G + ++M+S D T + + +
Sbjct: 23 ISGSIPPPGFAPRAS-ATPLHAALFNLMTDGDGVSYFKEMISNSDKTELQRMASLLTSDS 81
Query: 75 KYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCL 134
Y ++T +G +R +QKL+ + +A RRF + K AS V I+ +
Sbjct: 82 DYFMSIVTTKFG---SRRVQKLLG--KSDDVDAFFCAAILRRFLHITTDKYASYVTIRAM 136
Query: 135 ETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLS 193
D+ + LY + H +LA GC++LN+ I + P R LL+L++S+A LS
Sbjct: 137 VVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVASNALRLS 196
Query: 194 KDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---------- 243
D SGN+VVQHVL L D + I L G+ ELS + GS++VEK
Sbjct: 197 NDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVV 256
Query: 244 -------PSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIVPF 292
+ ++++GNFV+ +ALR TK M+ ++ L +Q ++PF
Sbjct: 257 ELLGCDGDRLMRLARNEFGNFVVVKALRFTK---MSRMDLFWGL-----VQKLMPF 304
>gi|297839687|ref|XP_002887725.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
gi|297333566|gb|EFH63984.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 119/280 (42%), Gaps = 52/280 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
+ L+ K + G FLQ++ S IF V + +LM D +G +L
Sbjct: 341 VYLMAKDQHGCRFLQRIFDEGTSADAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 400
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R +Q+L++ + ISLV SA F D++
Sbjct: 401 QRTQIVLVATAEPGQLIRISLNAYGTRVVQRLVETIRTGKQISLVKSALRPGFLDLIKDL 460
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI +CL+ L + N+ ++ AA E+ATH GC L I +R L+
Sbjct: 461 NGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAE 520
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
IS ++ L++DP GNY VQ V+ L + + LKG + +LS+ + SH+VE+
Sbjct: 521 ISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMH 580
Query: 241 --YQRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
RP I Q Y NFVIQ AL TKG
Sbjct: 581 CPESRPQIVRELISVPHFDQLLQDPYANFVIQAALAATKG 620
>gi|396458556|ref|XP_003833891.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
gi|312210439|emb|CBX90526.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
Length = 1025
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 50/286 (17%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--- 89
L P ++I L K + G FLQK L ++ IFE + +LMTD +G +L
Sbjct: 610 LKTMPRHEIYTLCKDQHGCRFLQKKLEDRNHEHIQIIFEETNPHVVELMTDPFGNYLCQK 669
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
R++QK+I+ + ++I A + D
Sbjct: 670 LLEFCNDEQRNTLVRNASPAMVSIALNQHGTRALQKMIEYISTEDQTQMIIQALSGQVVD 729
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + + ++ A H + TH GC L I+ G ++
Sbjct: 730 LIQDLNGNHVIQKCLNHLKPSEAQFIFDAVGEHCVTVGTHRHGCCVLQRCIDHAAGYQKI 789
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ I+ +A L +DP GNYVVQ++L L D ++ +C +G+ ELS + S+++E
Sbjct: 790 DLVHRITQNAFSLVQDPFGNYVVQYILDLNDENFTTPMCKSFEGRVPELSKQKFSSNVIE 849
Query: 240 KYQRPSIFTP-----------------CQHKYGNFVIQQALRVTKG 268
K R + + +YGN+VIQ AL G
Sbjct: 850 KCIRCANMDAKAMMIQELLDMVELEMLMRDQYGNYVIQTALEFAPG 895
>gi|225448285|ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
Length = 810
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 27/250 (10%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L + +I + + +L+ H R +QKLI+ L
Sbjct: 532 VVELMMNPFGNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETL 591
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
IS VISA F ++ + VI +CL+ L ++ N+ +++AA + E+ATH
Sbjct: 592 KTRQQISRVISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQ 651
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L I+ G R L+ ISS+ L++D GNYVVQ +L L + + +
Sbjct: 652 HGCCVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQ 711
Query: 221 LKGKFEELSLLRCGSHLVEKYQRPSIFTPC----------------------QHKYGNFV 258
+G + LS R SH+VEK T C QH + N+V
Sbjct: 712 FEGNYVHLSTQRFSSHVVEK-----CLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYV 766
Query: 259 IQQALRVTKG 268
IQ+AL+V +G
Sbjct: 767 IQKALQVYEG 776
>gi|407917960|gb|EKG11259.1| hypothetical protein MPH_11603 [Macrophomina phaseolina MS6]
Length = 1088
Score = 97.4 bits (241), Expect = 8e-18, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 50/275 (18%)
Query: 39 YDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD---GYGC-------- 87
+DIV L K + G +LQK + G++ I KIFEA + DLM D Y C
Sbjct: 667 HDIVELCKDQHGCRYLQKQIEGRNLDIVRKIFEATKDHVVDLMQDPFANYLCQKMYEFCN 726
Query: 88 ----------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE 125
H R++QK+I+ + + I+++I A ++
Sbjct: 727 DEQRTALVHNAAPQMVKIALNQHGTRALQKMIEYVSTAEQINIIIEALRHNVVTLIQDLN 786
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI KCL L + ++ ++ A + TH GC L I+ G +R L+ I
Sbjct: 787 GNHVIQKCLNHLGSKDSQFIFEAVGAACIVVGTHRHGCCVLQRCIDHASGDQRIALIGAI 846
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+++A L +DP GNYVVQ++L L + +++ +C+ +G LS + S++VEK R S
Sbjct: 847 TANAYSLVQDPFGNYVVQYILDLQEEQFTIPMCNAFRGNVPMLSKQKFSSNVVEKCIRVS 906
Query: 246 -----------IFTP------CQHKYGNFVIQQAL 263
+ P + Y N+V+Q +L
Sbjct: 907 NAETRRNLIEELLIPGELEKLIRDSYANYVVQTSL 941
>gi|168015525|ref|XP_001760301.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688681|gb|EDQ75057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 18/245 (7%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
I L K G+ +QK+L D + +I V +L+ H R++QKLI+ L
Sbjct: 70 ITELMKDPFGNYLVQKLLEVCDESQRMEILRVVTT-DGELVKISLNMHGTRAVQKLIETL 128
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+++VI+A +++ + V+ +CL+ L + ++ ++ AA H E+ATH
Sbjct: 129 KSPDQVTMVITALTEGVVELIKDLNGNHVVQRCLQKLSHEDSQFIFDAAAAHCVEIATHR 188
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC + ++ P++ L+ +I+++A LS+DP GNYVVQ++L L + ++
Sbjct: 189 HGCCVMQRCVDFASAPQKQRLVAVIAANALTLSQDPYGNYVVQYILDLKQGWATSEVMLR 248
Query: 221 LKGKFEELSLLRCGSHLVEKYQRPSI----------FTPC-------QHKYGNFVIQQAL 263
L+G + L++ + S++VEK + + T Q +Y N+VIQ AL
Sbjct: 249 LEGSYAFLAMQKFSSNVVEKCLKLGVEEHRGRLVRELTASSRLGQLLQDQYANYVIQSAL 308
Query: 264 RVTKG 268
V KG
Sbjct: 309 SVCKG 313
>gi|347835278|emb|CCD49850.1| similar to RNA-binding protein [Botryotinia fuckeliana]
Length = 794
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q +I L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 367 NVALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLC 426
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + + + +I A R
Sbjct: 427 QKLLEYCNDEERTVLIENASHDLVRIALNQHGTRALQKMIEFISTAGQVQTIIGALRYRV 486
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + ++ A H ++ TH GC L I+ G +
Sbjct: 487 VELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQ 546
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L+ IS++A L +DP GNYVVQ++L L + ++E + ++ G+ +LS + S++
Sbjct: 547 KAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNV 606
Query: 238 VEK----YQRPS-------IFTPCQ------HKYGNFVIQQAL 263
+EK Q PS + P Q + N+VIQ AL
Sbjct: 607 IEKCLRCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTAL 649
>gi|296086803|emb|CBI32952.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 27/241 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +I + + +L+ H R +QKLI+ L IS V
Sbjct: 6 GNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQISRV 65
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
ISA F ++ + VI +CL+ L ++ N+ +++AA + E+ATH GC L
Sbjct: 66 ISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCCVLQRC 125
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I+ G R L+ ISS+ L++D GNYVVQ +L L + + + +G + LS
Sbjct: 126 ISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLS 185
Query: 230 LLRCGSHLVEKYQRPSIFTPC----------------------QHKYGNFVIQQALRVTK 267
R SH+VEK T C QH + N+VIQ+AL+V +
Sbjct: 186 TQRFSSHVVEK-----CLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKALQVYE 240
Query: 268 G 268
G
Sbjct: 241 G 241
>gi|451846158|gb|EMD59469.1| hypothetical protein COCSADRAFT_259016 [Cochliobolus sativus
ND90Pr]
Length = 1004
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 50/281 (17%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--- 89
L P +I L K + G FLQK L +++ IF+ + +LMTD +G +L
Sbjct: 583 LKTMPRQEIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQK 642
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
R++QK+I+ + ++I A + D
Sbjct: 643 LLEFCNDEQRNTLVRNAAPAMVQIAFNQHGTRALQKMIEFISTDDQTQMIIRALSGQVVD 702
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + ++ A H + TH GC L I+ G ++
Sbjct: 703 LIQDLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKV 762
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ I++H+ L +DP GNYVVQ++L L D ++ +C +GK ELS + S+++E
Sbjct: 763 DLIRKITAHSFHLVQDPFGNYVVQYILDLNDTSFTTPMCQGFQGKICELSKQKFSSNVIE 822
Query: 240 KYQR-----------------PSIFTPCQHKYGNFVIQQAL 263
K R + + YGN+VIQ AL
Sbjct: 823 KCIRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTAL 863
>gi|168003728|ref|XP_001754564.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694185|gb|EDQ80534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 18/245 (7%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
I L K G+ +QK+L D + +I V +L+ H R++QKLI+ L
Sbjct: 84 ITELMKDPFGNYLVQKLLEVCDESQRMEILRVV-TMDGELVKISLNMHGTRAVQKLIETL 142
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+++VI+A +++ + V+ +CL+ L + ++ ++ AA H E+ATH
Sbjct: 143 KSPEQVTMVITALTEGVVELIKDLNGNHVVQRCLQKLCHEDSQFIFDAAAAHCVEIATHR 202
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC + ++ P++ L+ +I+++A LS+DP GNYVVQ++L L + ++
Sbjct: 203 HGCCVMQRCVDFASAPQKQRLVAVIAANALALSQDPYGNYVVQYILDLKQGWATSEVMVR 262
Query: 221 LKGKFEELSLLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQAL 263
L+G + L++ + S++VEK + + Q +Y N+VIQ AL
Sbjct: 263 LEGSYAFLAMQKFSSNVVEKCLKLGMEENRGRLVRELTASSRLGQLLQDQYANYVIQSAL 322
Query: 264 RVTKG 268
V KG
Sbjct: 323 SVCKG 327
>gi|429851913|gb|ELA27072.1| pumilio domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 997
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 50/270 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 577 LCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDDERT 636
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + S I ++I+A + +++ + VI
Sbjct: 637 VLIQNAAADMVRIALNQHGTRALQKMIEFVTTSTQIEMIINALRYQVVELIQDLNGNHVI 696
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + ++ A + ++ TH GC L I+ G ++ L+ I+ HA
Sbjct: 697 QKCLNKLSAKDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGDQKVWLISKITEHAP 756
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQRPS- 245
L +DP GNYVVQ+++ L + ++E I + K + +LS + S+++EK Q PS
Sbjct: 757 ILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLRCSQEPSR 816
Query: 246 ------IFTP------CQHKYGNFVIQQAL 263
+ TP + Y N+VIQ AL
Sbjct: 817 DMIVEELLTPGEIERLLRDSYANYVIQTAL 846
>gi|154316386|ref|XP_001557514.1| hypothetical protein BC1G_04124 [Botryotinia fuckeliana B05.10]
Length = 1088
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q +I L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 661 NVALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLC 720
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + + + +I A R
Sbjct: 721 QKLLEYCNDEERTVLIENASHDLVRIALNQHGTRALQKMIEFISTAGQVQTIIGALRYRV 780
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + ++ A H ++ TH GC L I+ G +
Sbjct: 781 VELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQ 840
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L+ IS++A L +DP GNYVVQ++L L + ++E + ++ G+ +LS + S++
Sbjct: 841 KAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNV 900
Query: 238 VEK----YQRPS-------IFTPCQ------HKYGNFVIQQAL 263
+EK Q PS + P Q + N+VIQ AL
Sbjct: 901 IEKCLRCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTAL 943
>gi|412986524|emb|CCO14950.1| predicted protein [Bathycoccus prasinos]
Length = 699
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 63/291 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
I +L + + G FLQ+ S F+ + + DLM D +G
Sbjct: 372 ISILARDQYGCRFLQRKFDEDGSAAIDACFDEIIEEAVDLMMDPFGNYLLQKLLECCSDK 431
Query: 87 -----------------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRF 117
H R++QKLI+ L I L A
Sbjct: 432 QRADVVRAVSVVNENANTGLPELVSIALNAHGTRAVQKLIETLSSDEEIELTTKALRPGV 491
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
++ + V+ +CL+ L + N+ +Y AA H E+ATH GC L I+ +
Sbjct: 492 VTLIKDLNGNHVVQRCLQRLSAEDNQFIYEAAKKHSVEIATHRHGCCVLQRCIDHATEEQ 551
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L+ I+ A LS+DP GNYVVQ++L LG + ++ L G + ELS+ + S++
Sbjct: 552 KRPLVQEIADQALTLSRDPFGNYVVQYILDLGLSWANAEVMMRLVGNYAELSMQKFSSNV 611
Query: 238 VEKYQRPSIFTPCQHK--------------------YGNFVIQQALRVTKG 268
VEK + + +H+ YGN+V+Q L VTKG
Sbjct: 612 VEKCLKLADQQLEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLMVTKG 662
>gi|361131374|gb|EHL03072.1| putative Pumilio domain-containing protein C6G9.14 [Glarea
lozoyensis 74030]
Length = 626
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q +I L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 197 NLALEQLGGEIYNLCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLC 256
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + I+++I + R
Sbjct: 257 QKLLEYCNDEERTVLIENASHDLVRIALNQHGTRALQKMIEFISTETQINIIIRSLKNRV 316
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L Q+++ ++ A H ++ TH GC L I+ G +
Sbjct: 317 VELIQDLNGNHVIQKCLNRLTAQQSQFIFDAVGIHCIDVGTHRHGCCVLQRCIDHASGDQ 376
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L+ IS++A L +DP GNYVVQ++L L + ++E + ++ +G+ +LS + S++
Sbjct: 377 KSWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFQGRVGQLSKQKFSSNV 436
Query: 238 VEKYQR----PS-------IFTPCQ------HKYGNFVIQQAL 263
+EK R PS + P + + N+VIQ AL
Sbjct: 437 IEKCLRCAKEPSKDMLIEEMLQPTELDRLLRDSFANYVIQTAL 479
>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis]
gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]
Length = 1204
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 16/235 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK L + +I V + P L+ + R++QKLI+ L IS V
Sbjct: 937 GNYVIQKFLDVCNEEQRLQIVFMVTEEPGQLLRICLNTYGTRAVQKLIETLKTRQQISFV 996
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ A F D++ + + VI +CL+ L N+ ++ AA ++ATH GC +
Sbjct: 997 VMALRPGFLDLVKDQNGNHVIQRCLQCLHNDDNKFIFDAAAKFSVQIATHRHGCCVMQRC 1056
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G R L+ IS +A L++DP GNYVVQ+++ L + + + S + + LS
Sbjct: 1057 ITHSTGKHREKLITEISKNALLLAQDPFGNYVVQYIVELKNPSAAVNLLSQFRRHYVHLS 1116
Query: 230 LLRCGSHLVEK------YQRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
+ + SH+VEK R I Q + N+VIQ AL VTKG
Sbjct: 1117 MQKFSSHVVEKCLKHLEESREQIVHELISVSRFEQLLQDPFANYVIQSALAVTKG 1171
>gi|242071465|ref|XP_002451009.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
gi|241936852|gb|EES09997.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
Length = 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 66 TYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE 125
TY I E + K P L H R +QK+I+ + S +S+V+S +M
Sbjct: 475 TYLIRE-ITKAPISLHKASCNMHGTRVVQKVIETMNTSDQVSMVVSTLNTGIMRLMTDSY 533
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ V + CLE L + L A + + +LA GC L I +R LL I
Sbjct: 534 GNHVALHCLEKLLPEHKAFLLETATSRYLQLARDRHGCCVLQKCIENSSDEQRNNLLCKI 593
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE---KYQ 242
+S A LS+D GNYV+Q +L L + +I L G F LS+ +CGSH+VE K
Sbjct: 594 TSSALVLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFGNLSMQKCGSHVVEHCLKLP 653
Query: 243 RP---SIFTPCQH----------KYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGI 289
RP I H +YGNFVIQ AL+ +G Q ++F++ I
Sbjct: 654 RPICDRIINELMHDPKLLHIILDQYGNFVIQTALKQCQGEQ-----------HAAFVETI 702
Query: 290 VP 291
P
Sbjct: 703 RP 704
>gi|328768244|gb|EGF78291.1| hypothetical protein BATDEDRAFT_37298 [Batrachochytrium
dendrobatidis JAM81]
Length = 636
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 33/236 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I +L K + G +LQ+ L ++ I+ ++ +LMTD +G +L
Sbjct: 258 ISVLSKDQHGCRYLQRKLEEQNEKHLDMIYVEIFPNFAELMTDPFGNYLCQKLLEYCTEE 317
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QKLI+ L IS V+ A ++ +
Sbjct: 318 QRNMLVEHVAPDLAAVSLNMHGTRAVQKLIEFLSTHHQISTVVRALALNVVSLIKDLNGN 377
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L + N+ +Y A H E+ATH GC L I+ +R L+ I+
Sbjct: 378 HVIQKCLNRLSHENNQFIYNAVRKHCTEIATHRHGCCVLQRCIDHASDSQRVQLVAEITY 437
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
HA L +DP GNYVVQ+VL L ++K+SE I G LS+ + S+++EK R
Sbjct: 438 HALTLVQDPFGNYVVQYVLDLAEIKFSEAIVHRFLGNICLLSVQKFSSNVIEKCIR 493
>gi|22330712|ref|NP_177940.2| pumilio 7 [Arabidopsis thaliana]
gi|313471413|sp|Q9C9R6.2|PUM7_ARATH RecName: Full=Putative pumilio homolog 7, chloroplastic;
Short=APUM-7; Short=AtPUM7; Flags: Precursor
gi|332197954|gb|AEE36075.1| pumilio 7 [Arabidopsis thaliana]
Length = 650
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 118/280 (42%), Gaps = 52/280 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
+ L+ K + G FLQ++ S IF V + +LM D +G +L
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R +Q+L++ + ISLV A F D++
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDL 457
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI +CL+ L + N+ ++ AA E+ATH GC L I +R L+
Sbjct: 458 NGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAE 517
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
IS ++ L++DP GNY VQ V+ L + + LKG + +LS+ + SH+VE+
Sbjct: 518 ISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMH 577
Query: 241 --YQRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
RP I Q Y NFVIQ AL TKG
Sbjct: 578 CPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKG 617
>gi|346972361|gb|EGY15813.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 905
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 50/273 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L ++ + I+ ++ +LMTD +G C
Sbjct: 448 IYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDD 507
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + S + ++I A R +++ +
Sbjct: 508 ERTVLIQNAAQDMVRIALNQHGTRALQKMIEFVTTSIQVQMIIDALRYRVVELIQDLNGN 567
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L + ++ A NH ++ TH GC L I+ G ++ L+ I+
Sbjct: 568 HVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCIDHADGAQKVWLIGKITE 627
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS-- 245
HA L +DP GNYVVQ+++ L + ++E + + + + +LS + S+++EK R S
Sbjct: 628 HAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRHKFSSNVIEKLLRCSQA 687
Query: 246 ---------IFTPCQ------HKYGNFVIQQAL 263
+ P + Y N+VIQ AL
Sbjct: 688 QGRDMIVDELLQPGEMDRLLRDSYANYVIQTAL 720
>gi|8885569|dbj|BAA97499.1| unnamed protein product [Arabidopsis thaliana]
Length = 315
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 120/247 (48%), Gaps = 27/247 (10%)
Query: 47 TEG-GSLFLQKMLSGKDSTITYK---IFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG 102
T+G G + ++M+S D T + + + Y ++T +G +R +QKL+
Sbjct: 38 TDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFG---SRRVQKLLG--KS 92
Query: 103 SPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRG 162
+ +A RRF + K AS V I+ + D+ + LY + H +LA G
Sbjct: 93 DDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHG 152
Query: 163 CVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL 221
C++LN+ I + P R LL+L+ S+A LS D SGN+VVQHVL L D + I L
Sbjct: 153 CIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNL 212
Query: 222 KGKFEELSLLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALR 264
G+ ELS + GS++VEK + ++++GNFV+ +ALR
Sbjct: 213 YGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALR 272
Query: 265 VTKGFQM 271
TK +M
Sbjct: 273 FTKEMRM 279
>gi|303282033|ref|XP_003060308.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457779|gb|EEH55077.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 333
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + I +A P +L++ H R++QKL++ L I L
Sbjct: 60 GNYLVQKLLECCNDEQRTGILKAGDGVP-ELVSVALNTHGTRAVQKLVETLRTPEHIRLA 118
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
A ++ + VI +CL+ L+ + N+ +Y AA E+ATH GC L
Sbjct: 119 TEALKPGVVTLIKDLNGNHVIQRCLQRLEAEDNQFVYDAAKACSVEIATHRHGCCVLQRC 178
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
++ +R L++ I++ A LS+DP GNYVVQ++L LG + ++ L G + ELS
Sbjct: 179 VDHAADSQRRALVNEIAAQALVLSQDPFGNYVVQYILDLGLPWANAEVMVRLGGAYAELS 238
Query: 230 LLRCGSHLVEK---------------YQRPSIFTPCQHK-----YGNFVIQQALRVTKG 268
+ + S++VEK R + +P + YGN+V+Q L VTKG
Sbjct: 239 MQKFSSNVVEKCLKLAGQELEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLTVTKG 297
>gi|15238635|ref|NP_200826.1| pumilio 19 [Arabidopsis thaliana]
gi|313471418|sp|Q9LSS8.2|PUM19_ARATH RecName: Full=Putative pumilio homolog 19; Short=APUM-19;
Short=AtPUM19
gi|332009907|gb|AED97290.1| pumilio 19 [Arabidopsis thaliana]
Length = 327
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 120/247 (48%), Gaps = 27/247 (10%)
Query: 47 TEG-GSLFLQKMLSGKDSTITYK---IFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG 102
T+G G + ++M+S D T + + + Y ++T +G +R +QKL+
Sbjct: 50 TDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFG---SRRVQKLLG--KS 104
Query: 103 SPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRG 162
+ +A RRF + K AS V I+ + D+ + LY + H +LA G
Sbjct: 105 DDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHG 164
Query: 163 CVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL 221
C++LN+ I + P R LL+L+ S+A LS D SGN+VVQHVL L D + I L
Sbjct: 165 CIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNL 224
Query: 222 KGKFEELSLLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALR 264
G+ ELS + GS++VEK + ++++GNFV+ +ALR
Sbjct: 225 YGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALR 284
Query: 265 VTKGFQM 271
TK +M
Sbjct: 285 FTKEMRM 291
>gi|406863177|gb|EKD16225.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1055
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 50/274 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 632 EIYALCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCND 691
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + I +I A R +++
Sbjct: 692 DERTVLIENASHDLVRIALNQHGTRALQKMIEFISTPGQIQTIIEALRHRVVELIQDLNG 751
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + ++ A H ++ TH GC L I+ G ++ L+ IS
Sbjct: 752 NHVIQKCLNKLSSTDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGEQKAWLIRQIS 811
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQ 242
++A L +DP GNYVVQ++L L + ++E + ++ +G+ +LS + S+++EK Q
Sbjct: 812 NNAYVLVQDPFGNYVVQYILDLNEPTFTEPLVAMFQGRVGQLSKQKFSSNVIEKCLRCAQ 871
Query: 243 RPS-------IFTPCQ------HKYGNFVIQQAL 263
PS + P + + N+VIQ AL
Sbjct: 872 EPSKDMLIEEMLQPAELDRLLRDSFANYVIQTAL 905
>gi|212537853|ref|XP_002149082.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068824|gb|EEA22915.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 1026
Score = 94.7 bits (234), Expect = 5e-17, Method: Composition-based stats.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q ++ L K + G +LQ+ L +++ IFE + + +LMTD +G +L
Sbjct: 604 NLPLEQYRGELYGLCKDQHGCRYLQRKLEERNADHVQMIFEETHMHVVELMTDPFGNYLC 663
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + I +VI A
Sbjct: 664 QKLLEYSNDDQRTRLIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIRMVIDALRGHV 723
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
D++ + VI KCL L + + +Y A H + TH GC L I+ G +
Sbjct: 724 VDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQ 783
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L+ I+S+A L +DP GNYVVQ++L L + +++ +C G LS + S++
Sbjct: 784 RARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSKQKFSSNV 843
Query: 238 VEKYQRPS-----------IFTP------CQHKYGNFVIQQAL 263
+EK R + I P + Y N+V+Q A+
Sbjct: 844 IEKCLRTAEYPMRCRMIDEILVPRELDAMLRDSYANYVVQTAM 886
>gi|302412761|ref|XP_003004213.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261356789|gb|EEY19217.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1157
Score = 94.7 bits (234), Expect = 5e-17, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 50/270 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 772 LCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDDERT 831
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + S + ++I A R +++ + VI
Sbjct: 832 VLIQNAAQDMVRIALNQHGTRALQKMIEFVTTSIQVQMIIDALRYRVVELIQDLNGNHVI 891
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A NH ++ TH GC L I+ G ++ L+ I+ HA
Sbjct: 892 QKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCIDHADGAQKVWLIGKITEHAP 951
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS----- 245
L +DP GNYVVQ+++ L + ++E + + + + +LS + S+++EK R S
Sbjct: 952 VLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRHKFSSNVIEKLLRCSQAQGR 1011
Query: 246 ------IFTP------CQHKYGNFVIQQAL 263
+ P + Y N+VIQ AL
Sbjct: 1012 DMIVDELLQPGEMDRLLRDSYANYVIQTAL 1041
>gi|189195174|ref|XP_001933925.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979804|gb|EDU46430.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1009
Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 50/281 (17%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--- 89
L P +I L K + G FLQK L ++ IF+ + +LMTD +G +L
Sbjct: 588 LKTMPRQEIYGLCKDQHGCRFLQKKLEERNPEHIQIIFDETALHVVELMTDPFGNYLCQK 647
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
R++QK+I+ + ++I A D
Sbjct: 648 LLEYCNDEQRNTLVRNATSAMVQIAFNQHGTRALQKMIEFISTDEQTQMIIQALSGEVVD 707
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + + ++ A H + TH GC L I+ G ++
Sbjct: 708 LIQDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKV 767
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ I++H+ L +DP GNYV+Q++L L D ++ +C +GK ELS+ + S+++E
Sbjct: 768 DLIRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQGKICELSMQKFSSNVIE 827
Query: 240 KYQR-----------------PSIFTPCQHKYGNFVIQQAL 263
K R + + + +GN+VIQ AL
Sbjct: 828 KCIRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTAL 868
>gi|451994865|gb|EMD87334.1| hypothetical protein COCHEDRAFT_1113338 [Cochliobolus
heterostrophus C5]
Length = 922
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 50/281 (17%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------ 86
L P +I L K + G FLQK L +++ IF+ + +LMTD +G
Sbjct: 501 LKTMPRQEIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQK 560
Query: 87 ----C-----------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
C H R++QK+I+ + ++I A + D
Sbjct: 561 LLEFCNDEQRNILVRNAAPAMVQIAFNQHGTRALQKMIEFISTDDQTQMIIRALSGQVVD 620
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + ++ A H + TH GC L I+ G ++
Sbjct: 621 LIQDLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKV 680
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ I++H+ L +DP GNYVVQ++L L D ++ +C +GK ELS + S+++E
Sbjct: 681 DLIRKITAHSFHLVQDPFGNYVVQYILDLNDASFTTPMCQGFQGKICELSKQKFSSNVIE 740
Query: 240 KYQR-----------------PSIFTPCQHKYGNFVIQQAL 263
K R + + YGN+VIQ AL
Sbjct: 741 KCIRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTAL 781
>gi|219887147|gb|ACL53948.1| unknown [Zea mays]
gi|413916364|gb|AFW56296.1| hypothetical protein ZEAMMB73_526143 [Zea mays]
Length = 685
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + I + K P L+ H R +QK+I+ + S +S+V
Sbjct: 412 GNYLIQKIFEKCNDNQKMHILYEITKIPGQLIEVACNMHGTRVVQKVIESISTSDEVSMV 471
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA +M V +CL L + L AA + ELA +GC +
Sbjct: 472 VSALSHGAITLMMDSNGCHVAERCLLKLSPEGKAFLVNAATKYCVELAKDRQGCCIIQKC 531
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I +R LL I++ A L++D GNYV+Q VLGLG + ++ L+G + LS
Sbjct: 532 IAHASKEQRNRLLYSITTRALELAEDEYGNYVIQFVLGLGVAWATNEVLDKLEGSYGYLS 591
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+C S++VEK R P + KYGN+VIQ ALR ++G
Sbjct: 592 TQKCSSNVVEKCLREAPERERARIILELIHDPRLLNVLVDKYGNYVIQTALRESEG 647
>gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 64/320 (20%)
Query: 10 LNRGIGIANLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKI 69
LN + ++ + S+ P Y +A+ I L K + G FLQ++ S KD I
Sbjct: 254 LNEDLTMSLNNLSLQPQKYNS---IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMI 310
Query: 70 FEAVYKYPFDLMTDGYGCHL------------------------------------ARSM 93
F + Y +LM D +G +L R++
Sbjct: 311 FNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAV 370
Query: 94 QKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHF 153
QK+++ IS++ISA ++ + + V+ +CL+ L + L+ AA+ H
Sbjct: 371 QKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHC 430
Query: 154 RELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG--------NYVVQHV 205
ELAT GC L + G ++ L+ I+S+A LS+DP G NYV+Q+V
Sbjct: 431 VELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGIDANFFCRNYVLQYV 490
Query: 206 LGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIFTPCQH------ 252
L + +I L+G + ELS+ +C S++VEK R I +
Sbjct: 491 FELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQ 550
Query: 253 ----KYGNFVIQQALRVTKG 268
YGN+VIQ AL+ +KG
Sbjct: 551 VMLDPYGNYVIQAALKQSKG 570
>gi|255950610|ref|XP_002566072.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593089|emb|CAP99465.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1018
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ L K + G +LQ+ L ++ IF Y + +LMTD +G +L
Sbjct: 603 ELYSLCKDQHGCRYLQRKLEERNPEHVQLIFSETYMHVIELMTDPFGNYLCQKLLEYSND 662
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + S VI+A D++
Sbjct: 663 EQRTALIDNAAPELVKIALNQHGTRALQKMIEFISTSKQTQTVINALQYHVVDLVQDLNG 722
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + E +Y A + + TH GC L I+ G ++ L+ I+
Sbjct: 723 NHVIQKCLNRLTPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDHASGHQKARLISQIT 782
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
SH+ L +DP GNYVVQ++L L + ++ +CS G +LS + S+++EK
Sbjct: 783 SHSFALVQDPFGNYVVQYILDLAEPSFTNPLCSTFAGNIPQLSKQKFSSNVIEK 836
>gi|169596899|ref|XP_001791873.1| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
gi|160707392|gb|EAT90868.2| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 50/281 (17%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--- 89
L P +I L K + G FLQK L + IF+ + +LMTD +G +L
Sbjct: 596 LKTMPRQEIYSLCKDQHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQK 655
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
R++QK+I+ + ++I A + D
Sbjct: 656 LLEFANDEQRNTLVRNACPAMVSIALNQHGTRALQKMIEFISTEEQTEMIIQALSGQVVD 715
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + + ++ A H + TH GC L I+ G ++
Sbjct: 716 LIQDLNGNHVIQKCLNHLKSSEAQFIFDAVGEHCVIVGTHRHGCCVLQRCIDHASGYQKV 775
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ I++H+ L +DP GNYVVQ++L L D ++ +C +GK ELS + S+++E
Sbjct: 776 DLVRKITAHSFHLVQDPFGNYVVQYILDLNDAAFTTPMCEGFRGKVVELSKQKFSSNVIE 835
Query: 240 KYQRPSIFTPCQ-----------------HKYGNFVIQQAL 263
K R + + Q YGN+V+Q AL
Sbjct: 836 KCIRCAEMSAKQMLIEELCDVEELEHLMRDSYGNYVVQTAL 876
>gi|336272059|ref|XP_003350787.1| hypothetical protein SMAC_12592 [Sordaria macrospora k-hell]
gi|380094950|emb|CCC07452.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 670
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 50/273 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
I L K + G +LQK L ++ + I+ ++ +LMTD +G
Sbjct: 247 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 306
Query: 87 -------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I + I+L+I A R +++ +
Sbjct: 307 ERTVLIRNATPDMVRIALNAHGTRALQKMIDSVSSPVQINLIIEALRNRVVELIQDLNGN 366
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL LD ++ A + E+ TH GC L I+ G ++ L++ I++
Sbjct: 367 HVIQKCLNKLDATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGSKKIWLIERITA 426
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---P 244
+A L +DP GNYVVQ+++ L + ++E + G+ +LS + S++VEK R P
Sbjct: 427 NAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVRQFLGRIPQLSKHKFSSNVVEKCLRCASP 486
Query: 245 S--------------IFTPCQHKYGNFVIQQAL 263
+ I Q YGN+V+Q AL
Sbjct: 487 NSKDMIVSEIMSQNEIKQLMQDSYGNYVVQTAL 519
>gi|15242461|ref|NP_196523.1| pumilio 21 [Arabidopsis thaliana]
gi|75264321|sp|Q9LXC5.1|PUM21_ARATH RecName: Full=Putative pumilio homolog 21; Short=APUM-21;
Short=AtPUM21
gi|7671428|emb|CAB89369.1| putative protein [Arabidopsis thaliana]
gi|9758989|dbj|BAB09516.1| unnamed protein product [Arabidopsis thaliana]
gi|332004034|gb|AED91417.1| pumilio 21 [Arabidopsis thaliana]
Length = 517
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 37/249 (14%)
Query: 60 GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCIS-LVISAAYRRFK 118
G T T +IF L T+ YG Q L L SP + L+ A F
Sbjct: 253 GSALTTTKRIF-------LHLATNQYGS------QALRILFRRSPSLDHLLFCAVDTNFF 299
Query: 119 DMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
+M K +II + +D+ K E LY + LA GC++LNN + E+RG R
Sbjct: 300 LLMSDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQEIRGIYR 359
Query: 179 GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
+ + ++++A++LS DP G +VVQ++L L + + I L+G F L++ R GS++V
Sbjct: 360 DLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVV 419
Query: 239 EK-----YQRPSIFTP-----------CQHKYGNFVIQQALRVTKGFQMTERNIIQELGQ 282
EK + R + K+GNFV+Q ALRV K +M R +++E
Sbjct: 420 EKCLKSDFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEM--RPLLRE--- 474
Query: 283 SSFIQGIVP 291
F++ + P
Sbjct: 475 --FVEKLRP 481
>gi|115486015|ref|NP_001068151.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|77551702|gb|ABA94499.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645373|dbj|BAF28514.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|125577613|gb|EAZ18835.1| hypothetical protein OsJ_34373 [Oryza sativa Japonica Group]
gi|215717155|dbj|BAG95518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 746
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L +I + + P +L+T H R++QK+I + IS V
Sbjct: 469 GNYLVQKLLEECSDDQRTRIICEITRVPGELITVACNMHGTRTVQKVIDTINTPEQISKV 528
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETL-DEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+SA +M S V +CL+ L E K +L +AA+ R LA GC +
Sbjct: 529 VSALSPGAMRLMTDTNGSHVAQRCLKKLLPEYKAFLLDVAALRFLR-LAKDQHGCCIIQK 587
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
I ++ LL I+S A LS+D GNYV+Q V+ LG + KI LKG F L
Sbjct: 588 CIEHSNDEQKYNLLCKITSSALSLSEDQYGNYVIQFVVNLGIEWATSKIVKELKGHFGYL 647
Query: 229 SLLRCGSHLVEKYQR--------------------PSIFTPCQHKYGNFVIQQALRVTKG 268
S+ +CGSH+VE + P I +GNFVIQ AL+ KG
Sbjct: 648 SMQKCGSHVVENCLKQASELDREMIIHELMADSKLPHIMA---DPFGNFVIQTALKECKG 704
Query: 269 FQMTERNIIQELGQSSFIQGIVP 291
EL SSF++ I P
Sbjct: 705 ----------EL-HSSFVEAIRP 716
>gi|12324246|gb|AAG52093.1|AC012680_4 putative RNA-binding protein; 42664-44784 [Arabidopsis thaliana]
Length = 626
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 117/279 (41%), Gaps = 52/279 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
+ L+ K + G FLQ++ S IF V + +LM D +G +L
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R +Q+L++ + ISLV A F D++
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDL 457
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI +CL+ L + N+ ++ AA E+ATH GC L I +R L+
Sbjct: 458 NGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAE 517
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
IS ++ L++DP GNY VQ V+ L + + LKG + +LS+ + SH+VE+
Sbjct: 518 ISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMH 577
Query: 241 --YQRPSIFTP----------CQHKYGNFVIQQALRVTK 267
RP I Q Y NFVIQ AL TK
Sbjct: 578 CPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATK 616
>gi|156059478|ref|XP_001595662.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980]
gi|154701538|gb|EDO01277.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1085
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q +I L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 658 NLALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLC 717
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + + +I A R
Sbjct: 718 QKLLEYCNDEERTVLIENASHDLVRIALNQHGTRALQKMIEFISTPGQVQTIIGALRFRV 777
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + ++ A H ++ TH GC L I+ G +
Sbjct: 778 VELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQ 837
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L+ IS++A L +DP GNYVVQ++L L + ++E + ++ G+ +LS + S++
Sbjct: 838 KAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFGGRVAQLSKQKFSSNV 897
Query: 238 VEK----YQRPS-------IFTPCQ------HKYGNFVIQQAL 263
+EK Q PS + P Q + N+VIQ AL
Sbjct: 898 IEKCLRCAQEPSKDMLIEEMLQPNQLDSLLRDSFANYVIQTAL 940
>gi|242808102|ref|XP_002485093.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715718|gb|EED15140.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1029
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q ++ L K + G +LQ+ L ++ IF + + +LMTD +G +L
Sbjct: 577 NLPLEQYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLC 636
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + I +VI A
Sbjct: 637 QKLLEYSNDDQRTRLIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIQMVIDALRGHV 696
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
D++ + VI KCL L + + +Y A H + TH GC L I+ G +
Sbjct: 697 VDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQ 756
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L+ I+S+A L +DP GNYVVQ++L L + ++E +C G LS + S++
Sbjct: 757 RARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNV 816
Query: 238 VEKYQRPS-----------IFTP------CQHKYGNFVIQQAL 263
+EK R + I P + Y N+V+Q A+
Sbjct: 817 IEKCLRTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAM 859
>gi|242808097|ref|XP_002485092.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715717|gb|EED15139.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1001
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q ++ L K + G +LQ+ L ++ IF + + +LMTD +G +L
Sbjct: 577 NLPLEQYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLC 636
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + I +VI A
Sbjct: 637 QKLLEYSNDDQRTRLIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIQMVIDALRGHV 696
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
D++ + VI KCL L + + +Y A H + TH GC L I+ G +
Sbjct: 697 VDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQ 756
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L+ I+S+A L +DP GNYVVQ++L L + ++E +C G LS + S++
Sbjct: 757 RARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNV 816
Query: 238 VEKYQRPS-----------IFTP------CQHKYGNFVIQQAL 263
+EK R + I P + Y N+V+Q A+
Sbjct: 817 IEKCLRTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAM 859
>gi|255564824|ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis]
Length = 771
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 53/281 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
+ L+ K + G FLQ+ S KIF V + +LMTD +G +L
Sbjct: 427 VYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNED 486
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R++QK+I+ L S+V+S+ ++ +
Sbjct: 487 QRMQILCAITRKAGELVRISCDMHGTRAVQKVIETLKTPQQFSMVVSSLKPGIVTLIKNM 546
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ V +CL+ L + +E L+ AA + ELAT GC L ++ G +R L+
Sbjct: 547 NGNHVAQRCLQYLTPEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCLISE 606
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
I+S+A LS+DP GNYVVQ V L + I L+G + +LS+ + S+++EK
Sbjct: 607 ITSNALILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSSNVIEKCLKY 666
Query: 241 ---YQRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
R I Q YGN+VIQ AL +KG
Sbjct: 667 ASEEHRAHIIRQLISNTHLDQVMQDPYGNYVIQAALHQSKG 707
>gi|408388462|gb|EKJ68146.1| hypothetical protein FPSE_11613 [Fusarium pseudograminearum CS3096]
Length = 859
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L ++ + I+ K+ +LMTD +G C
Sbjct: 348 IYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDD 407
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + + ++I A R +++ +
Sbjct: 408 ERTTLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHIIIEALRFRVVELIQDLNGN 467
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L Q + ++ A N+ E+ TH GC L I+ G ++ L+ I+
Sbjct: 468 HVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITE 527
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HA L +DP GNYVVQ+++ L + ++E I K +LS + S+++EK
Sbjct: 528 HARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEK 580
>gi|380483203|emb|CCF40767.1| pumilio domain-containing protein [Colletotrichum higginsianum]
Length = 446
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 50/270 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 19 LCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT 78
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + I ++I+A + +++ + VI
Sbjct: 79 VLIQNAAVDMVRIALNQHGTRALQKMIEFVTTPTQIGMIINALRFQVVELIQDLNGNHVI 138
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A + ++ TH GC L I+ G ++ L+ I+ HA
Sbjct: 139 QKCLNKLSALDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGEQKVWLIAKITEHAP 198
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQRPS- 245
L +DP GNYVVQ+++ L + ++E I + K + +LS + S+++EK Q PS
Sbjct: 199 ILVQDPFGNYVVQYIIDLNEPTFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLRCSQEPSR 258
Query: 246 ------IFTP------CQHKYGNFVIQQAL 263
+ +P + Y N+VIQ AL
Sbjct: 259 DMIVEELLSPGEIERLLRDSYANYVIQTAL 288
>gi|115451267|ref|NP_001049234.1| Os03g0191700 [Oryza sativa Japonica Group]
gi|108706609|gb|ABF94404.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547705|dbj|BAF11148.1| Os03g0191700 [Oryza sativa Japonica Group]
Length = 708
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISA 112
+QK+L D +I + + P L+ H RS+QKLI+ + I L+ISA
Sbjct: 443 LVQKLLDVCDEEQRLRIIAVLTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIMLIISA 502
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
F ++ + VI KCL+ D ++N+ ++ AA H E+A + GC L + I+
Sbjct: 503 LQPGFIHLVNDPNGNHVIQKCLKNFDAEENKFIFEAAATHCVEMAINRHGCCVLQSCISN 562
Query: 173 MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLR 232
G + L+ I + +L++D GNYV+Q+VL L + ++ SL +G + LS +
Sbjct: 563 AYGEYQIKLIMQICADGLYLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQK 622
Query: 233 CGSHLVEKY-------QRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
GS++VEK + +I Q Y N+VI AL T+G
Sbjct: 623 VGSNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALVQTRG 675
>gi|224063219|ref|XP_002301047.1| predicted protein [Populus trichocarpa]
gi|222842773|gb|EEE80320.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 120/283 (42%), Gaps = 58/283 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA---------- 90
+ L+ + + G LFLQK+ S IF+ + + +LM +G ++
Sbjct: 15 VYLMAQDQNGCLFLQKIFEEGTSQDVELIFDEIIGHIVELMLKPFGNYVVQKLLDVCDEK 74
Query: 91 --------------------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R +Q+LI+ L IS VI A D++ +
Sbjct: 75 HRLLIVRMITNEPGMLVRICLNTYGTRVVQRLIETLKTRQQISSVILALKPGVLDLVKDQ 134
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI +CL L + N+ ++ AA E+ATH GC + I G L+
Sbjct: 135 NGNHVIQRCLNLLSNEDNKFIFDAATKFCVEIATHRHGCCVMQRCIAHATGKHWDKLMTE 194
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL---KGKFEELSLLRCGSHLVEK- 240
IS + L++DP GNYVVQ+++ DLK S I LL KG + LS+ + GSH+VE+
Sbjct: 195 ISRNGLLLAQDPFGNYVVQYIM---DLKNSCSIAILLSQFKGNYVHLSMQKFGSHVVERC 251
Query: 241 ---------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
P Q + N+VIQ AL VTKG
Sbjct: 252 LGHFEESRSQIVLELLSVPRFEQLLQDPFANYVIQCALAVTKG 294
>gi|85083831|ref|XP_957198.1| hypothetical protein NCU01775 [Neurospora crassa OR74A]
gi|18376126|emb|CAD21191.1| conserved hypothetical protein [Neurospora crassa]
gi|28918285|gb|EAA27962.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 677
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 50/273 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
I L K + G +LQK L ++ + I+ ++ +LMTD +G
Sbjct: 271 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 330
Query: 87 -------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I + I+L+I A R +++ +
Sbjct: 331 ERTVLIRNATSDMVRIALNAHGTRALQKMIDSVSSPAQINLIIEALRNRVVELIQDLNGN 390
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L+ ++ A + E+ TH GC L I+ G ++ L++ I++
Sbjct: 391 HVIQKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIERITA 450
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---P 244
+A L +DP GNYVVQ+++ L + ++E + G+ +LS + S++VEK R P
Sbjct: 451 NAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLRCASP 510
Query: 245 S--------------IFTPCQHKYGNFVIQQAL 263
+ I Q YGN+V+Q AL
Sbjct: 511 NSKDRIVSEIMSQNEIKQLMQDSYGNYVVQTAL 543
>gi|255085754|ref|XP_002505308.1| predicted protein [Micromonas sp. RCC299]
gi|226520577|gb|ACO66566.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYK----YPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
G+ +QK+L + AV K P +L++ H R++QKL++ L
Sbjct: 60 GNYLVQKLLECCTDEQRMGVLRAVAKDGDGVP-ELVSVALNTHGTRAVQKLVETLRTPEQ 118
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
++L A ++ + VI +CL+ L + N+ +Y AA E+ATH GC
Sbjct: 119 VALATEALKPGVVTLIKDLNGNHVIQRCLQRLGAEDNQFVYDAARKCCVEIATHRHGCCV 178
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L I+ +R L+ I++ A LS+DP GNYVVQ++L L + ++ L G +
Sbjct: 179 LQRCIDHAADGQRRALVQEIAAQALVLSQDPFGNYVVQYILDLSLPWANAEVMMRLAGNY 238
Query: 226 EELSLLRCGSHLVEKYQRPSIFTPCQHK--------------------YGNFVIQQALRV 265
ELS+ + S++VEK + + + +H+ YGN+V+Q L V
Sbjct: 239 AELSMQKFSSNVVEKCLKLADASLEEHRNVVVREIMTSPLLDRLLMDPYGNYVVQSTLSV 298
Query: 266 TKGFQMTE 273
TKG +E
Sbjct: 299 TKGALHSE 306
>gi|336468401|gb|EGO56564.1| hypothetical protein NEUTE1DRAFT_65206 [Neurospora tetrasperma FGSC
2508]
gi|350289343|gb|EGZ70568.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 676
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 50/273 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
I L K + G +LQK L ++ + I+ ++ +LMTD +G
Sbjct: 270 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 329
Query: 87 -------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I + I+L+I A R +++ +
Sbjct: 330 ERTVLIRNATSDMVRIALNAHGTRALQKMIDSVSSPAQINLIIEALRNRVVELIQDLNGN 389
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L+ ++ A + E+ TH GC L I+ G ++ L++ I++
Sbjct: 390 HVIQKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIERITA 449
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---P 244
+A L +DP GNYVVQ+++ L + ++E + G+ +LS + S++VEK R P
Sbjct: 450 NAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLRCASP 509
Query: 245 S--------------IFTPCQHKYGNFVIQQAL 263
+ I Q YGN+V+Q AL
Sbjct: 510 NSKDRIVSEIMSQNEIKQLMQDSYGNYVVQTAL 542
>gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gibberella zeae PH-1]
Length = 779
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L ++ + I+ K+ +LMTD +G C
Sbjct: 347 IYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDD 406
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + + ++I A R +++ +
Sbjct: 407 ERTTLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHIIIEALRFRVVELIQDLNGN 466
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L Q + ++ A N+ E+ TH GC L I+ G ++ L+ I+
Sbjct: 467 HVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITE 526
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HA L +DP GNYVVQ+++ L + ++E I K +LS + S+++EK
Sbjct: 527 HARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEK 579
>gi|358378205|gb|EHK15887.1| hypothetical protein TRIVIDRAFT_164108, partial [Trichoderma virens
Gv29-8]
Length = 751
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 48/278 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L ++ + I+ ++ +LMTD +G C
Sbjct: 328 IYELCKDQHGCRYLQKKLEEREGDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 387
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + + L+I A R +++ +
Sbjct: 388 ERTVLIQNASKDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRVVELIQDLNGN 447
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L + ++ A N+ E+ TH GC L I+ G ++ L+ I+
Sbjct: 448 HVIQKCLNKLTASDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHATGQQKLWLIQRITE 507
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQR 243
HA L +DP GNYVVQ+++ L + ++E I + +G +LS + S+++EK Q
Sbjct: 508 HARILVQDPFGNYVVQYIIDLNEPTFTEPIVATFQGCISQLSRHKFSSNVIEKCLRCAQA 567
Query: 244 PS-------IFTPCQH----KYGNFVIQQALRVTKGFQ 270
PS I + + N+VIQ AL + Q
Sbjct: 568 PSKDMIVEEILNEMERFLRDSFANYVIQTALDFSTPHQ 605
>gi|242083470|ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
gi|241942853|gb|EES15998.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
Length = 562
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D+ + + F L+ H R++QKLI+ L ISLV
Sbjct: 293 GNYLMQKLLAVCDAGQRMALVLTLTADAFVLVRISLNVHGTRAVQKLIESLRTREEISLV 352
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I A F +++ + V+ KCL+ + N+ ++ AA H ++ GC L
Sbjct: 353 IDALRPGFLELIKDPNGNHVVQKCLQAFEADDNKAIFDAAALHCLDIGMQCHGCCVLQRC 412
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I RG R L+ I+ + L++D GNYVVQ+V+ L + + +GK+ LS
Sbjct: 413 IARSRGEHRDKLVAAIAGNGFKLAQDAYGNYVVQYVIDLKIPNANSSLAQQFEGKYIHLS 472
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P + QH Y N+VI AL+ +KG
Sbjct: 473 MQKFSSNVVEKCLKVFKEVDKAKIILEILATPHLEQLLQHPYANYVIYSALQNSKG 528
>gi|290985728|ref|XP_002675577.1| predicted protein [Naegleria gruberi]
gi|284089174|gb|EFC42833.1| predicted protein [Naegleria gruberi]
Length = 737
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 51/282 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G FLQK ++ + + +F+ +Y + +LMTD +G +L
Sbjct: 415 LAKDQYGCRFLQKKITDGEQGLQM-VFDEIYDHIVELMTDPFGNYLCQKLVEHCTNEHKT 473
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QKLI+ L I +I A ++ + VI
Sbjct: 474 LIIRAVSKDLINISMNMHGTRAVQKLIECLTTQDQIGEIIEALKDSVVPLIKDLNGNHVI 533
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
+CL+ L + + +Y A E+ATH GC L I+ +R L+ + ++A
Sbjct: 534 QRCLQQLIPENKQFIYNAVAGRCVEVATHKHGCCVLQRCIDHAAESQRMMLIKEVIANAH 593
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR------- 243
L ++P GNYVVQ+VL LGD +EKI + G LS+ + S+++EK R
Sbjct: 594 TLIQNPFGNYVVQYVLDLGDDSINEKIIARFYGSIASLSINKFSSNVIEKCLRIGNENVK 653
Query: 244 ----------PSIFTPCQHKYGNFVIQQALRVTKGFQMTERN 275
++ Q +GN+V+Q A+ ++ Q N
Sbjct: 654 NTMIEEVLEDRNLSALLQDSFGNYVVQTAISISDANQFARFN 695
>gi|330925771|ref|XP_003301186.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
gi|311324291|gb|EFQ90713.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
Length = 1012
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 50/281 (17%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--- 89
L P +I L K + G FLQK L ++ IF+ + +LMTD +G +L
Sbjct: 590 LKTMPRQEIYGLCKDQHGCRFLQKKLEERNHEHIQIIFDETAPHVVELMTDPFGNYLCQK 649
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
R++QK+I+ + ++I A D
Sbjct: 650 LLEFCNDEQRNTLVRNATPAMVQIAFNQHGTRALQKMIEFISTDEQTQMIIQALSGEVVD 709
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + + ++ A H + TH GC L I+ G ++
Sbjct: 710 LIQDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKV 769
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ I++H+ L +DP GNYV+Q++L L D ++ +C + K ELS+ + S+++E
Sbjct: 770 DLIRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQTKICELSMQKFSSNVIE 829
Query: 240 KYQR-----------------PSIFTPCQHKYGNFVIQQAL 263
K R + + + +GN+VIQ AL
Sbjct: 830 KCIRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTAL 870
>gi|322696542|gb|EFY88333.1| RNA-binding protein, putative [Metarhizium acridum CQMa 102]
Length = 1012
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 50/277 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 584 LCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT 643
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + L+I A R +++ + VI
Sbjct: 644 VLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRVVELIQDLNGNHVI 703
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A N+ E+ TH GC L I+ G ++ L+ I+ HA
Sbjct: 704 QKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVGRITEHAR 763
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQRPS- 245
L +DP GNYVVQ+++ L + ++E + ++ +G +LS + S+++EK Q PS
Sbjct: 764 ILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLRCSQAPSK 823
Query: 246 ------IFTP------CQHKYGNFVIQQALRVTKGFQ 270
+ P + + N+VIQ AL Q
Sbjct: 824 DMIVEELLAPQEMERLLRDSFANYVIQTALEFATPHQ 860
>gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649310|dbj|BAF29822.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|125579396|gb|EAZ20542.1| hypothetical protein OsJ_36154 [Oryza sativa Japonica Group]
Length = 520
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D I + K PF L+ H R++QKLI+ L I LV
Sbjct: 251 GNYLMQKLLAVCDDEQRMAIVLTLTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQLV 310
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ A F +++ + V+ +CL++ D N+ ++ AA H ++ GC L
Sbjct: 311 VQALRPGFLELIKDPNGNHVVQRCLQSFDANDNKPIFEAAAVHCLDIGMQCHGCCVLQRC 370
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G +R L+ I+S+ L++D GNYVVQ+V+ L + + +G++ LS
Sbjct: 371 IARSGGEQREKLVAAIASNGFELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLS 430
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P QH + N+VI A++ +KG
Sbjct: 431 MQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNSKG 486
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G LQ+ ++ K+ A+ F+L D YG ++ +Q +I L V P +
Sbjct: 363 GCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGNYV---VQYVIDLKV--PTANAS 417
Query: 110 ISAAYR-RFKDMMFSKEASSVIIKCLETLDEQKNE--VLYLAAMNHFRELATHVRGCVSL 166
++ ++ R+ + K +S+V+ KCL+ E +L L A+ HF +L H +
Sbjct: 418 LTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVI 477
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
+ I +G L + I H E L P
Sbjct: 478 YSAIQNSKGSLHSALTNAIRPHVELLRTSP 507
>gi|322710722|gb|EFZ02296.1| RNA-binding protein, putative [Metarhizium anisopliae ARSEF 23]
Length = 1023
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 50/277 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 594 LCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT 653
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + L+I A R +++ + VI
Sbjct: 654 VLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRVVELIQDLNGNHVI 713
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A N+ E+ TH GC L I+ G ++ L+ I+ HA
Sbjct: 714 QKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVGRITEHAR 773
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQRPS- 245
L +DP GNYVVQ+++ L + ++E + ++ +G +LS + S+++EK Q PS
Sbjct: 774 ILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLRCSQAPSK 833
Query: 246 ------IFTP------CQHKYGNFVIQQALRVTKGFQ 270
+ P + + N+VIQ AL Q
Sbjct: 834 DMIVEELLAPQEMERLLRDSFANYVIQTALEFATPHQ 870
>gi|125536693|gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
Length = 503
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D I + K PF L+ H R++QKLI+ L I LV
Sbjct: 234 GNYLMQKLLAVCDDEQRMAIVLTLTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQLV 293
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ A F +++ + V+ +CL++ D N+ ++ AA H ++ GC L
Sbjct: 294 VEALRPGFLELIKDPNGNHVVQRCLQSFDANDNKPIFEAAAVHCLDIGMQCHGCCVLQRC 353
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G +R L+ I+S+ L++D GNYVVQ+V+ L + + +G++ LS
Sbjct: 354 IARSGGEQREKLVAAIASNGFELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLS 413
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P QH + N+VI A++ +KG
Sbjct: 414 MQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNSKG 469
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G LQ+ ++ K+ A+ F+L D YG ++ +Q +I L V P +
Sbjct: 346 GCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGNYV---VQYVIDLKV--PTANAS 400
Query: 110 ISAAYR-RFKDMMFSKEASSVIIKCLETLDEQKNE--VLYLAAMNHFRELATHVRGCVSL 166
++ ++ R+ + K +S+V+ KCL+ E +L L A+ HF +L H +
Sbjct: 401 LTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVI 460
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
+ I +G L + I H E L P
Sbjct: 461 YSAIQNSKGSLHSALTNAIRPHVELLRTSP 490
>gi|358396949|gb|EHK46324.1| hypothetical protein TRIATDRAFT_153608 [Trichoderma atroviride IMI
206040]
Length = 757
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 52/282 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L ++S + I+ ++ +LMTD +G C
Sbjct: 328 IYELCKDQHGCRYLQKKLEERNSDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 387
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + I L+I A R ++ +
Sbjct: 388 ERTVLIQNASQRMEDIALNQHGTRALQKMIEYVSTPQQIHLIIEALRNRVVKLIKDLNGN 447
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFR--ELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
VI KCL L + ++ A N + E+ TH GC L I+ G ++ L+ I
Sbjct: 448 HVIQKCLNKLTATDAQFIFDAVGNGDKCVEVGTHRHGCCVLQRCIDHATGEQKLWLIQRI 507
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR-- 243
+ HA L +DP GNYVVQ+++ L + ++E I + +G +LS + S+++EK R
Sbjct: 508 TEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCIAQLSRHKFSSNVIEKCLRCA 567
Query: 244 ---------------PSIFTPCQHKYGNFVIQQALRVTKGFQ 270
P + + + N+VIQ AL + Q
Sbjct: 568 QAPSKDMIVEELLSQPEMERLLRDSFANYVIQTALEFSTPHQ 609
>gi|116199395|ref|XP_001225509.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
gi|88179132|gb|EAQ86600.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
Length = 1010
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q I L K + G +LQK L + + I+ ++ +LMTD +G +L
Sbjct: 591 NLPLEQVGGTIYSLCKDQHGCRYLQKQLENRIPDQIHMIWLETNQHVVELMTDPFGNYLC 650
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + I+L++ A +
Sbjct: 651 QKLLEYCNDDERTVLVQNSTSNMVTIALNQHGTRALQKMIEHVTTQVQINLIVEALRNQV 710
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L ++ A H E+ TH GC L I+ G +
Sbjct: 711 VELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQ 770
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L++ I+ HA L +DP GNYVVQ+++ L + ++E + +G+ LS + S++
Sbjct: 771 KIWLIERITDHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVKQFQGRIGMLSKHKFSSNV 830
Query: 238 VEKYQR-----------PSIFTP------CQHKYGNFVIQQAL 263
VEK R + TP + +GN+VIQ AL
Sbjct: 831 VEKCLRCAAEESRDMIVSELLTPGEIDRLLRDSFGNYVIQTAL 873
>gi|345568412|gb|EGX51306.1| hypothetical protein AOL_s00054g376 [Arthrobotrys oligospora ATCC
24927]
Length = 965
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 38/243 (15%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I LL K + G FLQ+ L ++ IF + +LMTD +G +L
Sbjct: 567 EIYLLCKDQHGCRFLQRKLEEQNPKDIEIIFRETQAFIVELMTDPFGNYLCQKLLEHTNN 626
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ L I VI+A + +++
Sbjct: 627 EQRSKLVNNAAPHLVEIALNQHGTRALQKMIEFLSTPDQIQTVINALRGKVVELIQDLNG 686
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + + ++ A + + TH GC L I+ P+R L+ I+
Sbjct: 687 NHVIQKCLNRLKPEDAQFIFDAVGKNSVTVGTHRHGCCVLQRCIDHASTPQRAQLIAHIT 746
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+A L +DP GNYVVQ++L LG+ + +E + G+ ELS+ + S+++EK
Sbjct: 747 ENAFALVRDPFGNYVVQYILDLGEPELAEPMIHKFLGRIIELSMQKFSSNVIEKVCPFQI 806
Query: 242 QRP 244
QRP
Sbjct: 807 QRP 809
>gi|156844826|ref|XP_001645474.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116137|gb|EDO17616.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 55/291 (18%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L Q +I L K + G FLQK L IF ++ +LMTD +G +L
Sbjct: 410 NATLDQFIGEIYSLCKDQHGCRFLQKQLDVMGENAANAIFNETKEHTVELMTDSFGNYLI 469
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKL++ + LV+ +
Sbjct: 470 QKLLERVTVEQRLEIAQISAPYFVDIALNPHGTRALQKLVECVGTEEEAQLVVDSLQPSI 529
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
++ + V+ KCL+ LD + ++ AA ++AT GC L ++ +
Sbjct: 530 VELSKDLNGNHVVQKCLQKLDPTYFQFIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQ 589
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD----LKYSEKICSLLKGKFEELSLLRC 233
R GL +++ S+ + LS DP GNYVVQ+V+ YS KI +LK K ++LSL +
Sbjct: 590 RRGLCEMLLSNIDQLSIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLSLHKF 649
Query: 234 GSHLVEK-YQRPSIFTP-----------------CQHKYGNFVIQQALRVT 266
GS++VEK + P++ P YGN+V+Q AL V+
Sbjct: 650 GSNVVEKILKTPALSEPLILELLKNNDESEIQMLLNDSYGNYVLQTALDVS 700
>gi|293333240|ref|NP_001169187.1| hypothetical protein [Zea mays]
gi|223975405|gb|ACN31890.1| unknown [Zea mays]
gi|413925374|gb|AFW65306.1| hypothetical protein ZEAMMB73_251972 [Zea mays]
Length = 754
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 17/233 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISA 112
+QK+L + + + K P L H R +QK+I + +S+++SA
Sbjct: 480 LVQKILEECTNDQRTHMIREITKAPIKLHKASCNVHGTRVVQKVIDTMNTPDQVSMLVSA 539
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+M + V+ CL+ L + + AA + + +LA GC L I
Sbjct: 540 LNTGMMCLMTDSYGNHVVDHCLQKLLPEHKAFILEAAASCYLQLARDRHGCCVLQKCIGH 599
Query: 173 MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLR 232
+R LL I+S A LS+DP GNYV+Q +L L + ++ L G F LS+ +
Sbjct: 600 SSDEQRNNLLCKITSSALTLSEDPYGNYVIQFILDLNIEWITVRVVDELAGHFGNLSMQK 659
Query: 233 CGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
CGSH+VE P + +YGNFVIQ AL+ +G
Sbjct: 660 CGSHVVEHCLKLAPRLICDRIINELMHDPKLLDIILDQYGNFVIQTALKQCQG 712
>gi|346323846|gb|EGX93444.1| RNA-binding protein, putative [Cordyceps militaris CM01]
Length = 1060
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 50/270 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 641 LCKDQHGCRYLQKKLEERNPEQVHMIWFETNQHVIELMTDPFGNYLCQKLLEFCNDDERT 700
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + L+I A R +++ + VI
Sbjct: 701 VLIQNASQDMVRIALNQHGTRALQKMIEYVNTPQQVHLIIEALRFRVVELIQDLNGNHVI 760
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A N+ E+ TH GC L I+ G ++ L+ I++HA
Sbjct: 761 QKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVARITAHAR 820
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR------- 243
L +DP GNYVVQ+++ L + ++E + + +G +LS + S+++EK R
Sbjct: 821 ILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLRCAQPPSR 880
Query: 244 ----------PSIFTPCQHKYGNFVIQQAL 263
P I + + N+VIQ AL
Sbjct: 881 DMIVEEMLAAPEIERLLRDSFANYVIQTAL 910
>gi|302923594|ref|XP_003053709.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
gi|256734650|gb|EEU47996.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
Length = 829
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 50/280 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L +++ + I+ ++ +LMTD +G C
Sbjct: 365 IYDLCKDQHGCRYLQKKLEERNAEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 424
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + + L+I A R +++ +
Sbjct: 425 ERTVLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRVVELIQDLNGN 484
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L + ++ A ++ E+ TH GC L I+ G ++ L+ I+
Sbjct: 485 HVIQKCLNKLTAPDAQFIFDAVGHNCIEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITE 544
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQR 243
HA L +DP GNYVVQ+++ L + ++E I + +G +LS + S+++EK Q
Sbjct: 545 HARVLVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCISQLSRHKFSSNVIEKCLRCAQA 604
Query: 244 PS-------IFTP------CQHKYGNFVIQQALRVTKGFQ 270
PS + P + + N+VIQ AL Q
Sbjct: 605 PSKDMIVEELLGPQEMERLLRDSFANYVIQTALEYATPHQ 644
>gi|50284731|ref|XP_444793.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524095|emb|CAG57684.1| unnamed protein product [Candida glabrata]
Length = 786
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 58/284 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G FLQK L + IFE +Y +LMTD +G +L
Sbjct: 467 NIYSLCKDQHGCRFLQKQLDVLGKKASDAIFEETKEYTVELMTDSFGNYLIQKLLERVTD 526
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE- 125
R++QKLI+ + +V+ + + ++ SK+
Sbjct: 527 DQRVELAKIAAPKMVEISKDPHGTRALQKLIECISTKEEAEIVVKSL--QPDTVILSKDL 584
Query: 126 -ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI KCL+ L+ + ++ ++ AA N E+ATH GC L ++ + L +
Sbjct: 585 NGNHVIQKCLQKLNPEDSQFIFDAAGNECGEIATHRHGCCVLQRCLDHGTKTQFKDLCEK 644
Query: 185 ISSHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ + + L+ DP GNYVVQ+++ D Y+ KI + LK +F ELS+ + GS++VEK
Sbjct: 645 LLKYIDMLTFDPFGNYVVQYIISKETERNDYDYTYKIVNQLKPRFTELSVHKFGSNVVEK 704
Query: 241 YQRPSIFTPC-----------------QHKYGNFVIQQALRVTK 267
R + + +GN+V+Q AL +++
Sbjct: 705 VLRTPVVSETIINELINEGSAEVQALLNDSFGNYVLQTALDISR 748
>gi|297796877|ref|XP_002866323.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
gi|297312158|gb|EFH42582.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
Length = 324
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
++S+Q+L+ + A R F +M K AS V IK + + K E++Y
Sbjct: 89 SKSIQRLMGM--SDDVDVFFFEAIMRLFLYVMTDKYASYVAIKGMRVFQQDKRELMYEHI 146
Query: 150 MNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGL 208
+ + LA GC++LN I ++ P R LLD+++++A LS D GN+VVQHVL L
Sbjct: 147 LQNALYLARDQHGCIALNEIITDLDDPYYRNQLLDIVANNALLLSNDAYGNFVVQHVLKL 206
Query: 209 GDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------QRPSIFTPC 250
D + + I L G ELS + GS++VE+ +R +
Sbjct: 207 RDFRCTRNIADNLCGHCVELSFKKYGSYIVERLLEVGDSVMELVVMDLLACKREMLMRLA 266
Query: 251 QHKYGNFVIQQALRVTKG 268
+ +YGNFV+ AL +TK
Sbjct: 267 RSEYGNFVVYNALDLTKD 284
>gi|367035312|ref|XP_003666938.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
gi|347014211|gb|AEO61693.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
Length = 827
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 50/273 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
I L K + G +LQK L + + I+ ++ +LMTD +G C
Sbjct: 378 IYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCSDD 437
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R++QK+I+ + I+L++ A + +++ +
Sbjct: 438 ERTVLIQNAAPSMVSIALNQHGTRALQKMIEHVTTQVQINLIVEALRNQVVELIQDLNGN 497
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L ++ A H E+ TH GC L I+ G ++ L++ I+
Sbjct: 498 HVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGNQKVWLVECITE 557
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---- 243
HA L +DP GNYVVQ+++ L + ++E + +G+ +LS + S++VEK R
Sbjct: 558 HAVTLVQDPFGNYVVQYIIDLNEATFTEPLVKQFEGRIAQLSKHKFSSNVVEKCLRCASD 617
Query: 244 -------PSIFTPCQ------HKYGNFVIQQAL 263
+ P + +GN+VIQ AL
Sbjct: 618 ESRDMIVSELLAPGEIERLLRDSFGNYVIQTAL 650
>gi|425771288|gb|EKV09735.1| hypothetical protein PDIP_63380 [Penicillium digitatum Pd1]
gi|425776819|gb|EKV15020.1| hypothetical protein PDIG_28960 [Penicillium digitatum PHI26]
Length = 1020
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ L K + G +LQ+ L ++ IF Y + +LMTD +G +L
Sbjct: 605 ELYSLCKDQHGCRYLQRKLEERNQEHVQLIFSETYMHVIELMTDPFGNYLCQKLLEYSND 664
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + VI+A D++
Sbjct: 665 EQRTALINNAAPELVKIALNQHGTRALQKMIEFISTPQQTQTVINALQYHVVDLVQDLNG 724
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + E +Y A + + TH GC L I+ G ++ L+ I+
Sbjct: 725 NHVIQKCLNRLSPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDHASGHQKARLISQIT 784
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
SH+ L +DP GNYVVQ++L L + ++ +C+ G +LS + S+++EK
Sbjct: 785 SHSFALVQDPFGNYVVQYILDLAEPSFTNPLCATFGGNIPQLSKQKFSSNVIEK 838
>gi|225459320|ref|XP_002284170.1| PREDICTED: uncharacterized protein LOC100257510 [Vitis vinifera]
Length = 724
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 22/247 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+ + +I A+ + P +L+ H R +QKL+ L
Sbjct: 448 VVELMMNPFGNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTL 507
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
ISLV+ A F D+ + V+ +CLE L + + + A + ++ATH
Sbjct: 508 KTRQQISLVVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHR 567
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L I G L+ IS++ L++D GNYV+Q+++ +LK I SL
Sbjct: 568 HGCCVLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYII---ELKIPSAIASL 624
Query: 221 L---KGKFEELSLLRCGSHLVEK------YQRPSIFTP----------CQHKYGNFVIQQ 261
+ +G + LS+ + SH+VEK RP I Q + N+VIQ
Sbjct: 625 MSQFEGNYVHLSMQKFSSHVVEKCLKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQS 684
Query: 262 ALRVTKG 268
AL VTKG
Sbjct: 685 ALEVTKG 691
>gi|15220217|ref|NP_174811.1| protein pumilio 9 [Arabidopsis thaliana]
gi|122244101|sp|Q1PFN9.1|PUM9_ARATH RecName: Full=Pumilio homolog 9; Short=APUM-9; Short=AtPUM9
gi|91805917|gb|ABE65687.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332193705|gb|AEE31826.1| protein pumilio 9 [Arabidopsis thaliana]
Length = 564
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 14 IGIANLSTSIGPGTY--GKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFE 71
IG L + GT+ K LLA D+ +V L G+ +QK+ D I
Sbjct: 262 IGCRVLQKLVEEGTFHEAKVILLAIIDH-VVELSMDPFGNYIVQKLFDVSDEEQRTLIVS 320
Query: 72 AVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVII 131
+ P +L+ + R +QK+I+ + I+LV S F ++ + VI
Sbjct: 321 VLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQ 380
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
CL+TL NE + AA + E+A H GC L I+ G +R L+ IS ++
Sbjct: 381 SCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLH 440
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSE-KICSLLKGKFEELSLLRCGSHLVEKYQR------- 243
LS+DP GNYVVQ+++ D + S K+ + + EL+ + SH++EK R
Sbjct: 441 LSQDPFGNYVVQYLI---DQQVSAVKLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRA 497
Query: 244 ---------PSIFTPCQHKYGNFVIQQALRVTKG 268
P+ Q Y N+VIQ AL VTKG
Sbjct: 498 EIVRELLCVPNFEYLLQDPYANYVIQTALSVTKG 531
>gi|320162710|gb|EFW39609.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1111
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 62/314 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L K + G FLQ+ + ++ ++ IF+ V+++ +LMTD +G +L
Sbjct: 779 IYSLCKDQIGCRFLQRKIEEQNESVIQIIFDEVFEHVGELMTDPFGNYLCQKLLEHCTEA 838
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QKL + L I LVISA ++ +
Sbjct: 839 QRTAIVQRVAPELVSISLNMHGTRAVQKLTECLKERGQIELVISAFRDAVVTLIKDLNGN 898
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI +CL+ N+ +Y A ++ ++ATH GC + I+ ++ L++ ++
Sbjct: 899 HVIQRCLQRFSAADNQFIYDAVASNCVQVATHRHGCCVMQRCIDNATEAQKHQLVNEVTF 958
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---P 244
H L +DP GNYVVQ+VL L ++S+ + + G L++ + S+++EK R P
Sbjct: 959 HVLNLVQDPFGNYVVQYVLDLNIPRFSDALVNQFLGNICPLAIQKFSSNVIEKCLRASEP 1018
Query: 245 SIFTP--------------CQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIV 290
+ T Q +GN+VIQ AL + Q+ NI+ ++GI
Sbjct: 1019 ATRTTMMLELLDERWLPRLLQDPFGNYVIQTALGIGDAQQL---NIM--------VEGIR 1067
Query: 291 PFNFHVVSYSSLTK 304
P +F+++ ++ K
Sbjct: 1068 P-HFNLIRHTPYGK 1080
>gi|118425863|gb|ABK90830.1| pumilio-family RNA binding protein [Hortaea werneckii]
Length = 457
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 50/274 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---C--------- 87
+I +L K + G LQ+ L +D T+ IF V + +LMTD +G C
Sbjct: 24 EIYMLCKDQHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELMTDPFGNYLCQKLLGGTND 83
Query: 88 ---------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QK+I+ + S++I A ++
Sbjct: 84 EQRTALIRNAMPAMTKIALNQHGTRALQKMIEFISTPEQTSMIIDALRYDVVQLIQDLNG 143
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI CL L + + ++ A + + TH GC L I+ G ++G L+D +
Sbjct: 144 NHVIQNCLNHLSSEDAQFIFDAVGANCVTVGTHRHGCCVLQRCIDHASGLQKGRLVDQVI 203
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR--- 243
+A L +DP GNYVVQ++L LG+ ++E +C + LS + S++VEK R
Sbjct: 204 HNAFSLVQDPFGNYVVQYILDLGEPAFTEPLCKSFQKNVVFLSKQKFSSNVVEKCIRCAG 263
Query: 244 --------PSIFTPCQ------HKYGNFVIQQAL 263
I P + + N+V+Q A+
Sbjct: 264 AETKRMLIAEIVAPTELEKLLRDSFANYVVQTAM 297
>gi|8778968|gb|AAF79883.1|AC021198_3 Contains similarity to a putative protein CAB78009 gi|7267527 from
Arabidopsis thaliana BAC T32A17 gb|AL161513. It contains
Pumilio-family RNA binding domains PF|00806 [Arabidopsis
thaliana]
Length = 671
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 14 IGIANLSTSIGPGTY--GKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFE 71
IG L + GT+ K LLA D+ +V L G+ +QK+ D I
Sbjct: 369 IGCRVLQKLVEEGTFHEAKVILLAIIDH-VVELSMDPFGNYIVQKLFDVSDEEQRTLIVS 427
Query: 72 AVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVII 131
+ P +L+ + R +QK+I+ + I+LV S F ++ + VI
Sbjct: 428 VLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQ 487
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
CL+TL NE + AA + E+A H GC L I+ G +R L+ IS ++
Sbjct: 488 SCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLH 547
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSE-KICSLLKGKFEELSLLRCGSHLVEKYQR------- 243
LS+DP GNYVVQ+++ D + S K+ + + EL+ + SH++EK R
Sbjct: 548 LSQDPFGNYVVQYLI---DQQVSAVKLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRA 604
Query: 244 ---------PSIFTPCQHKYGNFVIQQALRVTKG 268
P+ Q Y N+VIQ AL VTKG
Sbjct: 605 EIVRELLCVPNFEYLLQDPYANYVIQTALSVTKG 638
>gi|121703235|ref|XP_001269882.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119398025|gb|EAW08456.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 1002
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 33/237 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L +D IF+ + + +LMTD +G +L
Sbjct: 593 LCKDQHGCRYLQRKLEERDPEHVQLIFDETHLHVVELMTDPFGNYLCQKLLEYSNDDQRT 652
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + VI A +++ + VI
Sbjct: 653 ALINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIQALRDHVVELVQDLNGNHVI 712
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G +R L+ I+S+A
Sbjct: 713 QKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 772
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF 247
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R + F
Sbjct: 773 ALVQDPFGNYVVQYILDLAEPHFTEPLCQSFRGNIPALSKQKFSSNVIEKCLRTADF 829
>gi|440631710|gb|ELR01629.1| hypothetical protein GMDG_00005 [Geomyces destructans 20631-21]
Length = 1077
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 51/275 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G FLQK L +++ + I+ ++ +LMTD +G +L
Sbjct: 630 EIYSLCKDQHGCRFLQKKLEERNAEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEFCND 689
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + + I +I A + +++
Sbjct: 690 EERTVLIENASQDLLRIALNQHGTRALQKMIEFISTAGQIQTIIEALRYQVVELIQDLNG 749
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + ++ A H ++ TH GC L I+ G ++ L+ IS
Sbjct: 750 NHVIQKCLNKLSPLDAQFIFDAVGRHCVDVGTHRHGCCVLQRCIDHASGDQKAWLIRQIS 809
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQ 242
++A L +DP GNYVVQ++L L + ++E + ++ G+ +LS + S+++EK Q
Sbjct: 810 NNAFTLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVGQLSRQKFSSNVIEKCLRCAQ 869
Query: 243 RPS--------IFTPC------QHKYGNFVIQQAL 263
PS + TP + + N+V+Q AL
Sbjct: 870 EPSKDMLIEEMLATPADLERLLRDSFANYVVQTAL 904
>gi|400597533|gb|EJP65263.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1043
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 50/270 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 627 LCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT 686
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + L+I A R +++ + VI
Sbjct: 687 VLIQNASQDMVRIALNQHGTRALQKMIEYVNTPQQVHLIIEALRFRVVELIQDLNGNHVI 746
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A N+ E+ TH GC L I+ G ++ L+ I++HA
Sbjct: 747 QKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVARITAHAR 806
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQRPS- 245
L +DP GNYVVQ+++ L + ++E + + +G +LS + S+++EK Q PS
Sbjct: 807 ILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLRCAQPPSK 866
Query: 246 ------IFTPCQ------HKYGNFVIQQAL 263
+ P + + N+VIQ AL
Sbjct: 867 DMIVEEMLVPAEIERLLRDSFANYVIQTAL 896
>gi|341038523|gb|EGS23515.1| pumilio domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1033
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q +I L K + G +LQK L + + I+ V ++ +LM D +G +L
Sbjct: 588 NLSLEQCAGNIYSLCKDQHGCRYLQKQLENRIPAQIHMIWLEVNQHIVELMMDPFGNYLC 647
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + ++L++ A +
Sbjct: 648 QKLVEFCSDEERTVLIQNAAPEMVRIALNQHGTRALQKMIEHVTTPAQVNLIVEALRHQV 707
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L ++ A + E+ TH GC L I+ G +
Sbjct: 708 VELIQDLNGNHVIQKCLNKLSATDASFIFDAVGKNCVEVGTHRHGCCVLQRCIDHADGAQ 767
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L++ I++HA L +DP GNYVVQ+++ L + ++E + + KG+ LS + S++
Sbjct: 768 KVWLIECITAHAVTLVQDPFGNYVVQYIIDLNEETFTEPLVNQFKGRIISLSKHKFSSNV 827
Query: 238 VEKYQRPS-----------IFTPCQHK------YGNFVIQQAL 263
VEK R + + TP + + + N+VIQ AL
Sbjct: 828 VEKCLRCASDAARDMIVNELLTPGEMERLLRDSFANYVIQTAL 870
>gi|159471610|ref|XP_001693949.1| puf protein [Chlamydomonas reinhardtii]
gi|158277116|gb|EDP02885.1| puf protein [Chlamydomonas reinhardtii]
Length = 273
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 21/237 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L D + E +L++ H R++QKLI+ L ++
Sbjct: 6 GNYLVQKLL---DRCSEQQRLEVSGDRRGELVSVALNTHGTRAVQKLIETLSSREQRAIA 62
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I A ++ + V+ +CL+ L + ++ +Y AA+ E+ATH GC L
Sbjct: 63 IEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVACCVEVATHRHGCCVLQRC 122
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I+ ++ L+ ++ HA LS+D GNYVVQ+VL LG L + L+G F LS
Sbjct: 123 IDFATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDSCAAVVVALRGSFCSLS 182
Query: 230 LLRCGSHLVEK------------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
L + S++VE+ Q ++ Q YGN+VIQ AL VT G
Sbjct: 183 LQKFSSNVVERCLKLGGLDAERELIVRELIQPNNLSRLLQDGYGNYVIQSALSVTSG 239
>gi|356512063|ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 451
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 17/245 (6%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L + +I + + P L+ H R +QKL++ L
Sbjct: 173 VVELMMNPFGNYLMQKLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLVETL 232
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
ISL +SA F ++ + V+ +CL L + N+ +++AA + ++ATH
Sbjct: 233 KTRQQISLAVSALEPGFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQ 292
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L I G R L+ I ++A L++D GNYVVQ +L L + I
Sbjct: 293 HGCCVLQRCIGHSSGEYREKLIAEICANALLLAQDQFGNYVVQFILDLKISSVTTCIRLQ 352
Query: 221 LKGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQAL 263
+G + LS + GSH+VEK P Q + N+V+Q AL
Sbjct: 353 FEGNYVHLSRQKFGSHVVEKCLAAFNDENRSRVILELLSTPHFEHLLQDPHANYVVQSAL 412
Query: 264 RVTKG 268
R ++G
Sbjct: 413 RHSEG 417
>gi|357152596|ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 506
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D + A+ K PF L+ H R++QKLI+ L I LV
Sbjct: 237 GNYLMQKLLAVCDREQRMALVRALTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQLV 296
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
++A F +++ + V+ KCL+ + N+ ++ AA + ++ GC L
Sbjct: 297 VAALRPGFLELIKDPNGNHVVQKCLQAFEADDNKPIFAAAAIYCLDIGMQCHGCCVLQRC 356
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G + L+ I+ + L++D GNYVVQ+V+ L + + +GK+ LS
Sbjct: 357 IARSTGEHKEKLVAAIARNGFELAQDAYGNYVVQYVIELKVATANASLAQQFEGKYIHLS 416
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P QH Y N+V+ AL+ +KG
Sbjct: 417 MQKFSSNVVEKCLKVFKEADKATIILELLAAPHFERLLQHPYANYVVYSALQNSKG 472
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGS 103
+G G LQ+ ++ K+ A+ + F+L D YG ++ +Q +I+L V +
Sbjct: 343 IGMQCHGCCVLQRCIARSTGEHKEKLVAAIARNGFELAQDAYGNYV---VQYVIELKVAT 399
Query: 104 PCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNE--VLYLAAMNHFRELATHVR 161
SL ++ + K +S+V+ KCL+ E +L L A HF L H
Sbjct: 400 ANASLA-QQFEGKYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLAAPHFERLLQHPY 458
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
+ + + +G L + I H E L P
Sbjct: 459 ANYVVYSALQNSKGSLHSALTNAIRPHVELLRTSP 493
>gi|146416333|ref|XP_001484136.1| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 121/296 (40%), Gaps = 60/296 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLS---------GKD--STITYKIFEAVYKYPFD 79
NA L+ +I L K + G FLQ+ L GK+ S + IF +Y D
Sbjct: 390 NAKLSDFSGEIYNLCKDQHGCRFLQRQLDLGGKENNGHGKEQSSVVATMIFNEIYLKIVD 449
Query: 80 LMTDGYG---------------------------------CHLARSMQKLIKLLVGSPCI 106
LM D +G H R++QKL++ +
Sbjct: 450 LMVDPFGNYLIQKLFEHVSTDQRVILVKNAAPEFMRIALDSHGTRALQKLVECISTEEES 509
Query: 107 SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
L+I + + + V+ KCL+ L N+ ++ A H E+ATH GC L
Sbjct: 510 QLLIKSLSPHVVALSRDLNGNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCCVL 569
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
++ +R L ++ +A LS DP GNYVVQ+VL GD K E + S ++
Sbjct: 570 QRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNIV 629
Query: 227 ELSLLRCGSHLVEKYQRPSIFTPC----------------QHKYGNFVIQQALRVT 266
LSL + GS+++EK R S T YGN+V+Q +L V
Sbjct: 630 TLSLHKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSLDVA 685
>gi|190347187|gb|EDK39419.2| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 121/296 (40%), Gaps = 60/296 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLS---------GKD--STITYKIFEAVYKYPFD 79
NA L+ +I L K + G FLQ+ L GK+ S + IF +Y D
Sbjct: 390 NAKLSDFSGEIYNLCKDQHGCRFLQRQLDSGGKENNGHGKEQSSVVATMIFNEIYLKIVD 449
Query: 80 LMTDGYG---------------------------------CHLARSMQKLIKLLVGSPCI 106
LM D +G H R++QKL++ +
Sbjct: 450 LMVDPFGNYLIQKLFEHVSTDQRVILVKNAAPEFMRIALDSHGTRALQKLVECISTEEES 509
Query: 107 SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
L+I + + + V+ KCL+ L N+ ++ A H E+ATH GC L
Sbjct: 510 QLLIKSLSPHVVALSRDLNGNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCCVL 569
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
++ +R L ++ +A LS DP GNYVVQ+VL GD K E + S ++
Sbjct: 570 QRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNIV 629
Query: 227 ELSLLRCGSHLVEKYQRPSIFTPC----------------QHKYGNFVIQQALRVT 266
LSL + GS+++EK R S T YGN+V+Q +L V
Sbjct: 630 TLSLHKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSLDVA 685
>gi|195635993|gb|ACG37465.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D + + PF L+ H R++QKLI+ L I LV
Sbjct: 210 GNYLMQKLLAVCDDGQRMTLVLTLTADPFALVRISLNVHGTRAVQKLIERLSAREEIGLV 269
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ A F +++ + V+ KCL + N+ ++ AA H ++ + GC L
Sbjct: 270 MDALRPGFLELIKDTNGNHVVQKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRC 329
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I RG R L+ I+ + L++D GNYVVQ VL L + + GK+ LS
Sbjct: 330 IARSRGEHRDKLVAAIAHNGFKLAQDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLS 389
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P + H Y N+V+ AL+ +KG
Sbjct: 390 MQKFSSNVVEKCLKVFKEVDKAKIILELLATPHLEQLLPHCYANYVVYSALKNSKG 445
>gi|302141949|emb|CBI19152.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + +I A+ + P +L+ H R +QKL+ L ISLV
Sbjct: 6 GNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQQISLV 65
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ A F D+ + V+ +CLE L + + + A + ++ATH GC L
Sbjct: 66 VLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGCCVLQRC 125
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL---KGKFE 226
I G L+ IS++ L++D GNYV+Q+++ +LK I SL+ +G +
Sbjct: 126 ITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYII---ELKIPSAIASLMSQFEGNYV 182
Query: 227 ELSLLRCGSHLVEK------YQRPSIF-----TP-----CQHKYGNFVIQQALRVTKG 268
LS+ + SH+VEK RP I P Q + N+VIQ AL VTKG
Sbjct: 183 HLSMQKFSSHVVEKCLKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVTKG 240
>gi|363755368|ref|XP_003647899.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891935|gb|AET41082.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
Length = 731
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 129/286 (45%), Gaps = 62/286 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
I L K + G FLQ+ L S IFE +Y +LMTD +G +L +QKL++ +
Sbjct: 411 IYSLCKDQHGCRFLQRQLDIGGSEAATSIFEETNQYVVELMTDSFGNYL---IQKLVERV 467
Query: 101 VGSPCISLVISAAYR----------------------------------RFKDMMFSKE- 125
I+LV S+A R R + S++
Sbjct: 468 TEEQRITLVKSSAPRFVSIALDPHGTRALQKLVECIDTEVESQTIISSLRDSVVELSRDL 527
Query: 126 -ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ V+ KCL+ L +++ ++ AA ++ATH GC L ++ +R L D
Sbjct: 528 NGNHVVQKCLQRLSSAESQFIFDAACKECVKIATHRHGCCVLQRCLDHGNKEQRKQLCDN 587
Query: 185 ISSHAEFLSKDPSGNYVVQHVLG----LG-DLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
I + L+ DP GNYVVQ++L LG + +++ +I ++LK + ELSL + GS++VE
Sbjct: 588 ILDNVNLLTLDPFGNYVVQYILTKESELGSNHRHTHEIVNILKPRIIELSLHKFGSNVVE 647
Query: 240 KYQRPSIF----------TPCQH--------KYGNFVIQQALRVTK 267
K R I T H +GN+V+Q AL V K
Sbjct: 648 KILRTPIVAEIMIAELLNTGASHGIEQLLHDGFGNYVLQTALDVAK 693
>gi|212275350|ref|NP_001130994.1| uncharacterized protein LOC100192099 [Zea mays]
gi|194690654|gb|ACF79411.1| unknown [Zea mays]
gi|413916502|gb|AFW56434.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D + + PF L+ H R++QKLI+ L I LV
Sbjct: 210 GNYLMQKLLAVCDDGQRMTLVLTLTADPFALVRISLNVHGTRAVQKLIERLSAREEIGLV 269
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ A F +++ + V+ KCL + N+ ++ AA H ++ + GC L
Sbjct: 270 MDALRPGFLELIKDTNGNHVVQKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRC 329
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I RG R L+ I+ + L++D GNYVVQ VL L + + GK+ LS
Sbjct: 330 IARSRGEHRDKLVAAIAHNGFKLAEDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLS 389
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P + H Y N+V+ AL+ +KG
Sbjct: 390 MQKFSSNVVEKCLKVFKEVDKAKIILELLATPHLEQLLPHCYANYVVYSALKNSKG 445
>gi|224052863|ref|XP_002297618.1| predicted protein [Populus trichocarpa]
gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa]
Length = 620
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 136/320 (42%), Gaps = 68/320 (21%)
Query: 17 ANLSTSIGPGTYGKNALLAQPDYD--------IVLLGKTEGGSLFLQKMLSGKDSTITYK 68
A+L S+ T G N P Y+ I L+ K + G FLQ+ S K
Sbjct: 267 AHLFHSLSTPTAGTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQRTFSEGTPQDVEK 326
Query: 69 IFEAVYKYPFDLMTDGYGCHL------------------------------------ARS 92
IF + + +LMTD +G +L R+
Sbjct: 327 IFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVRISCDMHGTRA 386
Query: 93 MQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNH 152
+QK+I+ L S+V+SA ++ + + V +CL+ L + +E L+ A +
Sbjct: 387 VQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMPEYSEFLFEATTAN 446
Query: 153 FRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG-------NYVVQHV 205
ELAT GC L +++ +G +R L+ I+S+A LS+DP G NYVVQ V
Sbjct: 447 CVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGYCIFLFSNYVVQFV 506
Query: 206 LGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIFTP--------- 249
L + I L+G + +LS+ + S++VEK +R I
Sbjct: 507 FELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRRTRIIRELINNSRLDQ 566
Query: 250 -CQHKYGNFVIQQALRVTKG 268
Q +GN+VIQ AL+ +KG
Sbjct: 567 VMQDPFGNYVIQAALQQSKG 586
>gi|302775508|ref|XP_002971171.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
gi|300161153|gb|EFJ27769.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
Length = 321
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 53/277 (19%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
+ K + G FLQ+ + KIFE + + DLMTD +G +L
Sbjct: 11 IAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTEDQRL 70
Query: 90 ---------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
R++QKLI+ L +S++ S+ + ++ +
Sbjct: 71 EILRVVCSGDELISISLNMHGTRAVQKLIETLKSPEQVSMITSSLEQGIVILIKDLNGNH 130
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ +CL+ L ++N+ ++ AA H E+ TH GC L ++ +G ++ L+ I+++
Sbjct: 131 VVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVGEIAAN 190
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------- 241
A LS+D GNYVVQ++L E + + L+G L++ + S++VEK
Sbjct: 191 ALVLSQDQYGNYVVQYILDEAPWIAPE-VMAQLEGHHAHLAMQKFSSNVVEKCLKQGADD 249
Query: 242 QRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
+R I Q + N+VIQ AL VTKG
Sbjct: 250 KRARIIHELTKSAFLGQLLQDPFANYVIQCALTVTKG 286
>gi|302756987|ref|XP_002961917.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
gi|300170576|gb|EFJ37177.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
Length = 322
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 53/277 (19%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
+ K + G FLQ+ + KIFE + + DLMTD +G +L
Sbjct: 12 IAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTEDQRL 71
Query: 90 ---------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
R++QKLI+ L +S++ S+ + ++ +
Sbjct: 72 EILRVVCSGDELISISLNMHGTRAVQKLIETLKSPEQVSMITSSLEQGIVILIKDLNGNH 131
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ +CL+ L ++N+ ++ AA H E+ TH GC L ++ +G ++ L+ I+++
Sbjct: 132 VVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVGEIAAN 191
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------- 241
A LS+D GNYVVQ++L E + + L+G L++ + S++VEK
Sbjct: 192 ALVLSQDQYGNYVVQYILDEAPWIAPE-VMAQLEGHHAHLAMQKFSSNVVEKCLKQGADD 250
Query: 242 QRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
+R I Q + N+VIQ AL VTKG
Sbjct: 251 KRARIIHELTKSAFLGQLLQDPFANYVIQCALTVTKG 287
>gi|225435792|ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 23/282 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV L G+ +QK+L +I A+ + DL+ H R++QK+I+ L
Sbjct: 435 IVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETL 494
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
S S+++S+ ++ + V CL+ L + E L+ AA+ + ELAT
Sbjct: 495 RTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDR 554
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS-EKICS 219
GC L + +R ++ I+S+A LS+DP GNYVVQ+V + ++ I
Sbjct: 555 HGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYVF---EFPWAIVDILD 611
Query: 220 LLKGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQA 262
L+G + +LSL + S++VEK P I Q YGN+VIQ A
Sbjct: 612 QLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAA 671
Query: 263 LRVTKGFQMTERNIIQELGQSSFIQGIVPFNFHVVSYSSLTK 304
L +KG +I+ + + P+ V+S +SL K
Sbjct: 672 LNNSKG--AIHAALIEVIRSHVHVLRTSPYGKKVLSCTSLKK 711
>gi|259489449|tpe|CBF89730.1| TPA: RNA-binding protein, putative (AFU_orthologue; AFUA_1G02510)
[Aspergillus nidulans FGSC A4]
Length = 650
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQ+ L ++ IF + + +LMTD +G +L
Sbjct: 240 EIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSND 299
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + VI A +++
Sbjct: 300 EQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLNG 359
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L +K++ +Y A + TH GC L I+ G +R L++ I+
Sbjct: 360 NHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQIT 419
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+A L +DP GNYVVQ++L L + +++E +C + +LS + S+++EK
Sbjct: 420 ENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEK 473
>gi|367054818|ref|XP_003657787.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
gi|347005053|gb|AEO71451.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
Length = 1029
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q I L K + G +LQK L + + I+ ++ +LMTD +G +L
Sbjct: 602 NLPLEQVGGTIYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNYLC 661
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + I+L++ A +
Sbjct: 662 QKLLEYCNDDERTVLIQNASSDLVRIALNQHGTRALQKMIEHVTTPVQINLIVEALRNQV 721
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L ++ A H E+ TH GC L I+ G +
Sbjct: 722 VELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQ 781
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L++ I++HA L +DP GNYVVQ+V+ L + ++E + + + LS + S++
Sbjct: 782 KVWLIERITAHAVTLVQDPFGNYVVQYVIDLNEETFTEPLVQQFQNRIAALSKHKFSSNV 841
Query: 238 VEKYQR-----------PSIFTP------CQHKYGNFVIQQAL 263
VEK R + P + +GN+VIQ AL
Sbjct: 842 VEKCLRCASEQSRDMIVSELLAPGEIERLLRDSFGNYVIQTAL 884
>gi|297746500|emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 23/282 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV L G+ +QK+L +I A+ + DL+ H R++QK+I+ L
Sbjct: 446 IVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETL 505
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
S S+++S+ ++ + V CL+ L + E L+ AA+ + ELAT
Sbjct: 506 RTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDR 565
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS-EKICS 219
GC L + +R ++ I+S+A LS+DP GNYVVQ+V + ++ I
Sbjct: 566 HGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYVF---EFPWAIVDILD 622
Query: 220 LLKGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQA 262
L+G + +LSL + S++VEK P I Q YGN+VIQ A
Sbjct: 623 QLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAA 682
Query: 263 LRVTKGFQMTERNIIQELGQSSFIQGIVPFNFHVVSYSSLTK 304
L +KG +I+ + + P+ V+S +SL K
Sbjct: 683 LNNSKG--AIHAALIEVIRSHVHVLRTSPYGKKVLSCTSLKK 722
>gi|388579386|gb|EIM19710.1| ARM repeat-containing protein, partial [Wallemia sebi CBS 633.66]
Length = 664
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 20/238 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QKML + + E V +L+T H R++QK+I L I+ +
Sbjct: 242 GNYLCQKMLEFANDQQRDTLCETVSP---ELVTISLNMHGTRAVQKMIDYLSTRRQINTI 298
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I + ++ + VI KCL L N+ +Y A ++ E+ATH GC L
Sbjct: 299 IMSLSLNVVTLIKDLNGNHVIQKCLNRLIPNDNQFIYNAVASNCIEVATHRHGCCVLQRC 358
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I+ +R L+ I+ HA L +DP GNYVVQ+VL L D ++S+ + G LS
Sbjct: 359 IDHASDQQRIQLVTEITYHALTLIQDPFGNYVVQYVLDLNDNRFSDGVVRQFLGHICALS 418
Query: 230 LLRCGSHLVEK-------YQRPSIFTPCQHK----------YGNFVIQQALRVTKGFQ 270
+ + S+++EK R S+ H+ +GN+V+Q AL + Q
Sbjct: 419 VQKFSSNVIEKCIRVADASTRSSVIDELNHRPRLEKLLRDAFGNYVVQTALDFAEPVQ 476
>gi|302787963|ref|XP_002975751.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
gi|300156752|gb|EFJ23380.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 52/276 (18%)
Query: 45 GKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--------------- 89
K + G FLQK S KIF V + DLMTD +G +L
Sbjct: 12 AKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDTQRRE 71
Query: 90 --------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSV 129
R++QKLI+ L +S+V S+ + ++ + V
Sbjct: 72 ILRGVTRNGELVNISLNMHGTRAVQKLIETLKSPEQVSMVTSSLMQGVVTLIKDSNGNHV 131
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
+ KCL+ L + + + AA H ++ TH GC L I+ G + L+ I+++A
Sbjct: 132 VQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVSEIAANA 191
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS---- 245
LS+D GNYVVQ++L L + + L+G F L++ + S++VEK + S
Sbjct: 192 LILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLKQSSEDS 251
Query: 246 -------IFTPC------QHKYGNFVIQQALRVTKG 268
I T Q + N+VIQ AL V KG
Sbjct: 252 RALIIREIITSSLLSQLLQDPFANYVIQCALSVAKG 287
>gi|302783855|ref|XP_002973700.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
gi|300158738|gb|EFJ25360.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 52/276 (18%)
Query: 45 GKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--------------- 89
K + G FLQK S KIF V + DLMTD +G +L
Sbjct: 12 AKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDTQRRE 71
Query: 90 --------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSV 129
R++QKLI+ L +S+V S+ + ++ + V
Sbjct: 72 ILRVVTRNGELVNISLNMHGTRAVQKLIETLKSPEQVSMVTSSLMQGVVTLIKDSNGNHV 131
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
+ KCL+ L + + + AA H ++ TH GC L I+ G + L+ I+++A
Sbjct: 132 VQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVSEIAANA 191
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS---- 245
LS+D GNYVVQ++L L + + L+G F L++ + S++VEK + S
Sbjct: 192 LILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLKQSSEDS 251
Query: 246 -------IFTPC------QHKYGNFVIQQALRVTKG 268
I T Q + N+VIQ AL V KG
Sbjct: 252 RALIIREIITSSLLSQLLQDPFANYVIQCALSVAKG 287
>gi|115396764|ref|XP_001214021.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193590|gb|EAU35290.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1019
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L +++ IFE + + +LMTD +G +L
Sbjct: 612 LCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYLCQKLLEYSNDEQRT 671
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + VI + +++ + VI
Sbjct: 672 TLINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTTTVIQSLQDHVVELVQDLNGNHVI 731
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G +R L+ I+S+A
Sbjct: 732 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 791
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK
Sbjct: 792 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEK 841
>gi|402076055|gb|EJT71478.1| RNA-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1066
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 124/289 (42%), Gaps = 50/289 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q I L K + G +LQK L + + I+ ++ +LMTD +G +L
Sbjct: 602 NLSLEQVGGTIYELCKDQHGCRYLQKQLENRQPEHVHMIWLETNQHVVELMTDPFGNYLC 661
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + + ++I + R
Sbjct: 662 QKLLEYCNEEERTVLIQNASQDMVRIALNQHGTRALQKMIEFINTDEQVQIIIESLRNRV 721
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L+ +++ ++ A ++ TH GC L I+ G +
Sbjct: 722 VELIQDLNGNHVIQKCLNKLNCTQSQFIFDAVGKSAIDVGTHRHGCCVLQRCIDHASGDQ 781
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+ L+ I+ HA L +DP GNYVVQ+++ L + ++E + + +G+ LS + S++
Sbjct: 782 KVWLIQRITEHAVALVQDPFGNYVVQYIIDLNEPSFTEPLVGMFRGRISALSRHKFSSNV 841
Query: 238 VEKYQR-----------PSIFTP------CQHKYGNFVIQQALRVTKGF 269
+EK R I P + + N+VIQ AL + +
Sbjct: 842 IEKCLRCAQDGSKDMIAEEILAPGEIERLLRDSFANYVIQTALEYSTHY 890
>gi|356528052|ref|XP_003532619.1| PREDICTED: uncharacterized protein LOC100799294 [Glycine max]
Length = 779
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +I + + P L+ H R +QKLI+ L ISL
Sbjct: 510 GNYLMQKLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLA 569
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA F ++ + V+ +CL L + N+ +++AA + ++ATH GC L
Sbjct: 570 VSALEPGFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRC 629
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G + L+ I ++A L++D GNYVVQ +L L + I +G + LS
Sbjct: 630 IGHSNGEYQEKLIAEICANALLLAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAHLS 689
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ GSH+VEK P Q + N+V+Q ALR ++G
Sbjct: 690 RQKFGSHVVEKCLAVFNDENRSRVILELLSMPHFEHLLQDPHANYVVQSALRHSEG 745
>gi|353234716|emb|CCA66738.1| related to Drosophila pumilio protein and Mpt5p protein
[Piriformospora indica DSM 11827]
Length = 980
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I L+ K + G FLQK L IF +K+ +LMTD +G
Sbjct: 525 EIPLMCKDQHGCRFLQKKLEEGVPEHRDIIFRETFKHFAELMTDPFGNYLCQKLLEYSTD 584
Query: 87 --------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QK+I L I +I A ++
Sbjct: 585 EQRNLICESVAGDLVTISLNMHGTRAVQKMIDFLSTQRQIVAIIRALSLHVVTLIKDLNG 644
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + N+ +Y A H E+ATH GC L I+ +R L+ I+
Sbjct: 645 NHVIQKCLNRLVPEDNQFIYNAVATHCVEVATHRHGCCVLQRCIDHASETQRLQLVTEIT 704
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HA L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++EK
Sbjct: 705 YHALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFFGNVCALSVQKFSSNVIEK 758
>gi|410080980|ref|XP_003958070.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
gi|372464657|emb|CCF58935.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
Length = 807
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 55/282 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I L K + G FLQK L IFE + +LMTD +G
Sbjct: 486 NIYSLCKDQHGCRFLQKQLDVLGKYAADAIFEETKDHTIELMTDSFGNYLIQKLIERVTT 545
Query: 87 --------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QKLI+ + + +++I A +
Sbjct: 546 EQRIEIAKIASPEFVDIALNSHGTRALQKLIECISTAEEANIIIEALKPAVVRLSMDLNG 605
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCLE L+ + + ++ A+ ++ATH GC L ++ + L D +
Sbjct: 606 NHVVQKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQRCLDHGTKEQTTSLCDQLL 665
Query: 187 SHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQ 242
++ + L+ DP GNYVVQ++L D +Y+ KI +LLK K ELSL + GS+++EK
Sbjct: 666 TNLDKLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLLKPKLAELSLHKFGSNVIEKLL 725
Query: 243 RPSIFTPC------------------QHKYGNFVIQQALRVT 266
+ ++ + YGN+V+Q AL ++
Sbjct: 726 KTNVVSESIIAELVKEDGKSDIESLLNDSYGNYVLQTALDIS 767
>gi|70990304|ref|XP_750001.1| RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847633|gb|EAL87963.1| RNA-binding protein, putative [Aspergillus fumigatus Af293]
Length = 1062
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 33/241 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ L K + G +LQ+ L ++ IF+ + +LMTD +G +L
Sbjct: 649 ELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKLLEFSND 708
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + I VI A +++
Sbjct: 709 EQRTALINNAANQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRDHVVELVQDLNG 768
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + + +Y A + + TH GC L I+ G +R L+ I+
Sbjct: 769 NHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQIT 828
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
++A L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R +
Sbjct: 829 ANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAE 888
Query: 247 F 247
F
Sbjct: 889 F 889
>gi|159130481|gb|EDP55594.1| RNA-binding protein, putative [Aspergillus fumigatus A1163]
Length = 1062
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 33/241 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ L K + G +LQ+ L ++ IF+ + +LMTD +G +L
Sbjct: 649 ELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKLLEFSND 708
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + I VI A +++
Sbjct: 709 EQRTALINNAANQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRDHVVELVQDLNG 768
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + + +Y A + + TH GC L I+ G +R L+ I+
Sbjct: 769 NHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQIT 828
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
++A L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R +
Sbjct: 829 ANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAE 888
Query: 247 F 247
F
Sbjct: 889 F 889
>gi|357120480|ref|XP_003561955.1| PREDICTED: uncharacterized protein LOC100842718 [Brachypodium
distachyon]
Length = 685
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
+ +QK+L D +I + + P L+ H R++QKLI+ + I L+
Sbjct: 417 ANYLVQKLLDVCDEEQRLRIIAVLTEDPVKLLRISLNTHGTRAVQKLIETVKIRKQIVLI 476
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
ISA F ++ + VI KCL ++N+ ++ AA H E+A H GC L
Sbjct: 477 ISAIQPGFMHLVNDLNGNHVIQKCLTNFGVEENKFIFEAAAAHCFEMAIHRHGCCVLQKC 536
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I RG + L+ + +HA L++DP GNYVVQ+VL + + + +G + LS
Sbjct: 537 ITSARGEYQAKLIVEVCAHAFQLAQDPFGNYVVQYVLDQKIPSANAHLAAQFEGNYVYLS 596
Query: 230 LLRCGSHLVEK 240
+ S++VEK
Sbjct: 597 KQKVSSNVVEK 607
>gi|320591503|gb|EFX03942.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 1112
Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 50/270 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L ++ + I+ ++ +LMTD +G +L
Sbjct: 661 LCKDQHGCRYLQKQLENRNPEQVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDDERT 720
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + ++I A D++ + VI
Sbjct: 721 VLIQNAAQDMVRIALNQHGTRALQKMIEFISTEAQVQIIIEALRHCVVDLIKDLNGNHVI 780
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + ++ A E+ TH GC L I+ G ++ L+ I+ A
Sbjct: 781 QKCLNKLTPANAQFIFDAVGGACVEVGTHRHGCCVLQRCIDHASGDQKVWLIQRITEEAV 840
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP- 249
L +DP GNYVVQ+++ L DL ++E + + +G+ LS + S++VEK R S+
Sbjct: 841 TLIQDPYGNYVVQYIIDLNDLNFTEPLVARFRGRICSLSRHKFSSNVVEKCLRCSLEPSR 900
Query: 250 ----------------CQHKYGNFVIQQAL 263
+ Y N+V+Q AL
Sbjct: 901 DMIVEEVLNSGEVERLVRDSYANYVVQTAL 930
>gi|67516077|ref|XP_657924.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
gi|40746570|gb|EAA65726.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
Length = 1515
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQ+ L ++ IF + + +LMTD +G +L
Sbjct: 592 EIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSND 651
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + VI A +++
Sbjct: 652 EQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLNG 711
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L +K++ +Y A + TH GC L I+ G +R L++ I+
Sbjct: 712 NHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQIT 771
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+A L +DP GNYVVQ++L L + +++E +C + +LS + S+++EK
Sbjct: 772 ENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEK 825
>gi|389624159|ref|XP_003709733.1| RNA-binding protein [Magnaporthe oryzae 70-15]
gi|351649262|gb|EHA57121.1| RNA-binding protein [Magnaporthe oryzae 70-15]
Length = 1053
Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 52/287 (18%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQK L G+ + I+ ++ +LMTD +G +L
Sbjct: 600 LCKDQHGCRYLQKQLEGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFCNEEERT 659
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + ++I + R +++ + VI
Sbjct: 660 VLIQNASQDMVRIALNQHGTRALQKMIEFINTEEQVQIIIESLRDRVVELIQDLNGNHVI 719
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L ++ ++ A E+ TH GC L I+ G ++ L+ I+ HA
Sbjct: 720 QKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVWLIARITEHAV 779
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS----- 245
L +DP GNYVVQ+++ L + ++E + + +G+ LS + S+++EK R S
Sbjct: 780 TLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEKCLRCSADVSK 839
Query: 246 ------IFTP------CQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
I P + + N+VIQ AL + MT+ +++ +
Sbjct: 840 DMIAEEILAPGEIERLIRDSFANYVIQTALEYST--PMTKHRLVETI 884
>gi|440472633|gb|ELQ41484.1| pumilio domain-containing protein, partial [Magnaporthe oryzae Y34]
gi|440485994|gb|ELQ65903.1| pumilio domain-containing protein, partial [Magnaporthe oryzae
P131]
Length = 811
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 52/290 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L K + G +LQK L G+ + I+ ++ +LMTD +G +L
Sbjct: 355 IYELCKDQHGCRYLQKQLEGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFCNEE 414
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QK+I+ + + ++I + R +++ +
Sbjct: 415 ERTVLIQNASQDMVRIALNQHGTRALQKMIEFINTEEQVQIIIESLRDRVVELIQDLNGN 474
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL L ++ ++ A E+ TH GC L I+ G ++ L+ I+
Sbjct: 475 HVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVWLIARITE 534
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS-- 245
HA L +DP GNYVVQ+++ L + ++E + + +G+ LS + S+++EK R S
Sbjct: 535 HAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEKCLRCSAD 594
Query: 246 ---------IFTP------CQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
I P + + N+VIQ AL + MT+ +++ +
Sbjct: 595 VSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYST--PMTKHRLVETI 642
>gi|367015510|ref|XP_003682254.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
gi|359749916|emb|CCE93043.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
Length = 823
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 63/286 (22%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G FLQK L S IFE + +LMTD +G +L + +
Sbjct: 503 NIHSLCKDQHGCRFLQKQLDILGSEAADSIFEETKNHTVELMTDSFGNYLIQKLLERVTV 562
Query: 94 -QKLIKLLVGSPCISLVISA-----AYRRFKDMMFSKEASSVII---------------- 131
Q++ + +P + S A ++ + + SKE +++II
Sbjct: 563 EQRITLAKIAAPHFVYIASNPHGTRALQKLVECIGSKEEANIIIGSLKGSVVELSKDLNG 622
Query: 132 -----KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
KCL+ L + ++ AA H E+ATH GC L ++ +R L D +
Sbjct: 623 NHIVQKCLQKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRLCDKLL 682
Query: 187 SHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQ 242
S+ + L+ DP GNYVVQ+++ G+ ++ KI LK K ELSL + GS+++EK
Sbjct: 683 SNIDHLTLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFGSNVIEKIL 742
Query: 243 RPSIFTPC----------------------QHKYGNFVIQQALRVT 266
R TP YGN+V+Q L VT
Sbjct: 743 R----TPAVSDDLITELLSSRAEADIQALLNDGYGNYVLQTMLDVT 784
>gi|384490402|gb|EIE81624.1| hypothetical protein RO3G_06329 [Rhizopus delemar RA 99-880]
Length = 492
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 14 IGIANLSTSIGPGTYGKNALLAQPDY--DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFE 71
IGI ++S + A L D DI L+ K + G +LQK L D IF
Sbjct: 211 IGIQRRASSTSMMDDARFASLNLEDMKDDIYLICKDQNGCRYLQKKLEETDLQQREVIFN 270
Query: 72 AVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVII 131
VY + +LMT G +L ++ + ++ +++ KD+ + VI
Sbjct: 271 QVYPHFVELMT---GKYLQNNLDEQVR-------------SSFTLIKDI----NGNHVIQ 310
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
KCL + + +Y A + E+ATH GC L I+ + L+D I +HA
Sbjct: 311 KCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSANNQTKQLVDEIINHALT 370
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ+VL LGD ++S ++ G +LS + S+++EK
Sbjct: 371 LVQDPYGNYVVQYVLELGDAQFSNRLIRQFIGNLSKLSTQKYSSNVMEK 419
>gi|429329361|gb|AFZ81120.1| pumilio-family RNA binding repeat domain-containing protein
[Babesia equi]
Length = 798
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 58/288 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+++ + + + G LQ+ L D I + V + LMTD +G +L
Sbjct: 328 NVLTIAQDQTGCRMLQRQLEYNDENFIASILDEVIDHLVVLMTDPFGNYLCQKLMTVCSS 387
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QKLI+++ IS V S D++
Sbjct: 388 EQLGRIIKGVEKDFLSICLNMHGTRAIQKLIEVVTEPEHISFVTSVLSTAVVDLVNDLNG 447
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL +L + E +Y A ++ LATH GC + I+ +R L+D IS
Sbjct: 448 NHVIQKCLISLKSEDCEFIYKAMNDNCVYLATHRHGCCVMQRCIDAANPQQRNMLIDTIS 507
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
S L +D GNYV+Q+VL L D + + +I L E + + S++VE R I
Sbjct: 508 SKTLDLVEDAFGNYVIQYVLRLKDDEINRRIVVALADNVTEFAKQKFSSNVVE---RCLI 564
Query: 247 FTPCQHK----------------------YGNFVIQQALRVTKGFQMT 272
F P + + +GN+VIQ+ L V + +++
Sbjct: 565 FCPLEVRSILISKFLNVPFDVLKELILDPFGNYVIQRVLNVAQSDELS 612
>gi|83765714|dbj|BAE55857.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 641
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---C------------- 87
L K + G +LQ+ L ++ IF+ + + +LMTD +G C
Sbjct: 243 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRT 302
Query: 88 -----------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
H R++QK+I+ + VI A +++ + VI
Sbjct: 303 ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHVVELVQDLNGNHVI 362
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G +R L+ I+S+A
Sbjct: 363 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 422
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK
Sbjct: 423 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEK 472
>gi|119497273|ref|XP_001265396.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119413558|gb|EAW23499.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 1056
Score = 87.4 bits (215), Expect = 7e-15, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 33/241 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ L K + G +LQ+ L ++ IF+ + +LMTD +G +L
Sbjct: 643 ELYTLCKDQHGCRYLQRKLEERNPEHVQFIFDETNMHVVELMTDPFGNYLCQKLLEYSND 702
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + I VI A +++
Sbjct: 703 EQRTALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRDHVVELVQDLNG 762
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + + +Y A + + TH GC L I+ G +R L+ I+
Sbjct: 763 NHVIQKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQIT 822
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
++A L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R +
Sbjct: 823 ANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAE 882
Query: 247 F 247
F
Sbjct: 883 F 883
>gi|147858798|emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
Length = 773
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +I + + +L+ H R +QKLI+ L IS V
Sbjct: 380 GNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQISRV 439
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNE-------------VLYLAAMNHFREL 156
ISA F ++ + VI +CL+ L ++ N+ +++AA + E+
Sbjct: 440 ISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKEEMIGQLLTCTKKFIFVAAAKYCVEI 499
Query: 157 ATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK 216
ATH GC L I+ G R L+ ISS+ L++D GNYVVQ +L L +
Sbjct: 500 ATHQHGCCVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSN 559
Query: 217 ICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPC----------------------QHKY 254
+ + +G + LS R SH+VEK T C QH +
Sbjct: 560 LIAQFEGNYVHLSTQRFSSHVVEK-----CLTVCTEENQSRIVHELLSTSHFEQLLQHPH 614
Query: 255 GNFVIQQALRVTKG 268
N+VIQ+AL+V +G
Sbjct: 615 ANYVIQKALQVYEG 628
>gi|328853049|gb|EGG02190.1| hypothetical protein MELLADRAFT_24024 [Melampsora larici-populina
98AG31]
Length = 325
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA--------- 90
D+ L K + G FLQK L + T IF +Y + +LMTD +G +L+
Sbjct: 16 DMFGLCKDQHGCRFLQKKLEEGEPTHRDMIFAEIYPHFGELMTDAFGNYLSQKLLEYSTD 75
Query: 91 ------------------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L + +I A ++
Sbjct: 76 EQRDLLIESISGELVSISLNMHGTRAVQKMIDFLSTQRQVQSLIIALNLNVVTLIKDLNG 135
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+ I+
Sbjct: 136 NHVIQKCLNHLPPEDNQFIYNAVAANCIEVATHRHGCCVLQRCIDHASESQRIQLVTEIT 195
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
++ L +DP GNYVVQ+VL L D ++ E I G LS+ + S++VEK R S
Sbjct: 196 YNSLSLVQDPFGNYVVQYVLDLNDSRFIEAIVRQFLGNVCALSMQKFSSNVVEKCIRVS 254
>gi|452845425|gb|EME47358.1| hypothetical protein DOTSEDRAFT_69329 [Dothistroma septosporum
NZE10]
Length = 1038
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 50/274 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G FLQ+ L ++ IFE V + DLM D +G +L
Sbjct: 607 EIYTLCKDQHGCRFLQRKLEERNEKTVQIIFEEVNTHMVDLMVDPFGNYLCQKLLESTND 666
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + +L+I A ++
Sbjct: 667 DQRTVLIQNAKPAMTKIALNQHGTRALQKMIEYISTPEQTALIIDALRNDVVLLIQDLNG 726
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L ++ A N+ + TH GC L I+ G ++G ++D +
Sbjct: 727 NHVIQKCLNHLSSIDAAFIFHAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVI 786
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
+A L +DP GNYVVQ++L L + ++E +C G+ LS + S+++EK R S
Sbjct: 787 RNAYALVQDPFGNYVVQYILDLSEPCFTEPLCQAFFGEIPALSRQKFSSNVIEKCIRCSS 846
Query: 247 FT----------PCQ-------HKYGNFVIQQAL 263
T P Q + N+V+Q A+
Sbjct: 847 ETTKRSLVQEIMPTQVLEKLLRDGFANYVVQTAM 880
>gi|325094905|gb|EGC48215.1| pumilio family RNA binding protein [Ajellomyces capsulatus H88]
Length = 651
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------------- 89
K + G +LQK L + IF + + +LMTD +G +L
Sbjct: 250 KDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTAL 309
Query: 90 -----------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIK 132
R++QK+I+ + VI+A R +++ + VI K
Sbjct: 310 INNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINALRDRVVELVQDLNGNHVIQK 369
Query: 133 CLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL 192
CL L + +Y A + TH GC L I+ G +R L++ I+++A L
Sbjct: 370 CLNRLSATDAQFIYDAVGESCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 429
Query: 193 SKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+DP GNYVVQ++L L + + E IC +G LS + S+++EK
Sbjct: 430 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEK 477
>gi|449018917|dbj|BAM82319.1| probable serine rich pumilio family rna binding domain pr otein
[Cyanidioschyzon merolae strain 10D]
Length = 910
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
+ L+ + + G +LQ L K++ T IFE + +L D +G
Sbjct: 566 MALMARDQQGGRYLQARLDVKNAADTALIFEECRPHFVELAMDPFGNYLCQKLFEHCNRE 625
Query: 87 ----------------C---HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
C H R +QK+I+L V +L+ A +M +
Sbjct: 626 QRLELIRQSASQLAQVCMDPHGTRVVQKMIELTVEPEHAALIAQAISPHCLSLMCDVNGN 685
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI +CL+ +D +Y A+ + E+A H GC L ++ +R L LI +
Sbjct: 686 HVIQRCLQRMDVPLRRFIYDTALTRYLEIARHRHGCCVLQRCLDHATAEQRSNLCALILN 745
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
A L +DP GNYVVQ+VL L + Y+ I ++G +LS+ + S++VEK
Sbjct: 746 SAYELMQDPFGNYVVQYVLELKEPSYTRAIIQRIRGHLWQLSMQKFSSNVVEK 798
>gi|225554623|gb|EEH02919.1| pumilio RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 793
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------------- 89
K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 370 KDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTAL 429
Query: 90 -----------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIK 132
R++QK+I+ + VI+A R +++ + VI K
Sbjct: 430 INNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINALRDRVVELVQDLNGNHVIQK 489
Query: 133 CLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL 192
CL L + +Y A + TH GC L I+ G +R L++ I+++A L
Sbjct: 490 CLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 549
Query: 193 SKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+DP GNYVVQ++L L + + E IC +G LS + S+++EK
Sbjct: 550 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEK 597
>gi|238483549|ref|XP_002373013.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
gi|220701063|gb|EED57401.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
Length = 911
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IF+ + + +LMTD +G +L
Sbjct: 513 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRT 572
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + VI A +++ + VI
Sbjct: 573 ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHVVELVQDLNGNHVI 632
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G +R L+ I+S+A
Sbjct: 633 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 692
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK
Sbjct: 693 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEK 742
>gi|147789082|emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV L G+ +QK+L +I A+ + DL+ H R++QK+I+ L
Sbjct: 476 IVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETL 535
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
S S+++S+ ++ + V CL+ L + E L AA+ + ELAT
Sbjct: 536 RTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMPEYREFLXEAAITNCVELATDR 595
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS-EKICS 219
GC L + +R ++ I+S+A LS+DP GNYVVQ+V + ++ I
Sbjct: 596 HGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYVF---EFPWAIVDILD 652
Query: 220 LLKGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQA 262
L+G + +LSL + S++VEK P I Q YGN+VIQ A
Sbjct: 653 QLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAA 712
Query: 263 LRVTKG 268
L +KG
Sbjct: 713 LNNSKG 718
>gi|366987657|ref|XP_003673595.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
gi|342299458|emb|CCC67213.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
Length = 828
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 123/283 (43%), Gaps = 59/283 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+I L K + G FLQK L S IFE + +LMTD +G +L MQKLI+
Sbjct: 509 NIYSLCKDQHGCRFLQKQLDVLGSKAADLIFEETKFHTIELMTDSFGNYL---MQKLIER 565
Query: 100 LVGSPCISLVISA---------------AYRRFKDMMFSKEASSVII------------- 131
+ I L A A ++ + + ++E + +I+
Sbjct: 566 VTTEQRIELAKIASPQFVEIALNPHGTRALQKLIECINTEEEAKIIVESLRDSIVQLSKD 625
Query: 132 --------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
KCL+ L + ++ A ++ ++ATH GC L ++ + L D
Sbjct: 626 LNGNHVVQKCLQKLHPTDFQFIFDATCDNCVDIATHRHGCCVLQRCLDHGTKEQCEKLCD 685
Query: 184 LISSHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
+ SH + L+ DP GNYVVQ+V+ + Y+ KI LLK K ELS+ + GS+++E
Sbjct: 686 KLLSHVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELSVHKFGSNVIE 745
Query: 240 KYQRPSIFTPC----------------QHKYGNFVIQQALRVT 266
K R + T YGN+V+Q AL ++
Sbjct: 746 KILRTPVVTETMILELLNHESEIQNLLNDSYGNYVLQTALDIS 788
>gi|449452779|ref|XP_004144136.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 698
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 54/281 (19%)
Query: 41 IVLLGKTEGGSLFLQ-KMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
I L+ K + G FLQ K + G D I KIF+ + +LM D +G +L
Sbjct: 385 IFLMAKDQHGCRFLQRKFMEGTDEDIE-KIFKEIIDRVVELMMDAFGNYLVQKLLEVCND 443
Query: 90 --------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS 123
R++QK+I+ L + +++SA +M +
Sbjct: 444 NQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKN 503
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ V CL+ L E+L+ AA N +LA GC L ++ R L++
Sbjct: 504 INGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLIN 563
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
I+ +A +S+D GNYVVQ +L L +E I L+G + +LS+ + S++VEK
Sbjct: 564 EITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQ 623
Query: 241 -------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
P Q YGN+ IQ AL T+G
Sbjct: 624 FAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEG 664
>gi|154277036|ref|XP_001539363.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414436|gb|EDN09801.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1175
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------------- 89
K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 752 KDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTAL 811
Query: 90 -----------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIK 132
R++QK+I+ + VI+A R +++ + VI K
Sbjct: 812 INNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINALRDRVVELVQDLNGNHVIQK 871
Query: 133 CLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL 192
CL L + +Y A + TH GC L I+ G +R L++ I+++A L
Sbjct: 872 CLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 931
Query: 193 SKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+DP GNYVVQ++L L + + E IC +G LS + S+++EK
Sbjct: 932 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNISALSKQKFSSNVIEK 979
>gi|391870982|gb|EIT80151.1| RNA-binding protein, putative [Aspergillus oryzae 3.042]
Length = 992
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IF+ + + +LMTD +G +L
Sbjct: 594 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRT 653
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + VI A +++ + VI
Sbjct: 654 ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHVVELVQDLNGNHVI 713
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G +R L+ I+S+A
Sbjct: 714 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 773
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK
Sbjct: 774 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEK 823
>gi|317141237|ref|XP_001817859.2| RNA-binding protein [Aspergillus oryzae RIB40]
Length = 992
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IF+ + + +LMTD +G +L
Sbjct: 594 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRT 653
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + VI A +++ + VI
Sbjct: 654 ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHVVELVQDLNGNHVI 713
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G +R L+ I+S+A
Sbjct: 714 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 773
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK
Sbjct: 774 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEK 823
>gi|297809067|ref|XP_002872417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318254|gb|EFH48676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 22/245 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
I LG G+ F+QK+L + +I + P L+ + R +QKLI+ +
Sbjct: 298 IAELGIDPFGNYFIQKLLEVCNEEQRTQILIRLTSKPGLLIKISINNYGTRVVQKLIETV 357
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
ISLV SA F ++ + VI+ CL+ N+ + AA+ E+ATH
Sbjct: 358 TTKEQISLVKSALVPGFLSLVRELNGNHVILNCLKFFGPNDNKFILEAAIKFCTEIATHR 417
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL--GLGDLKYSEKIC 218
GC L ++ G + L+ IS ++ L++DP GNYVVQ+++ +G + +
Sbjct: 418 HGCCVLQRCVSYSVGEQHEKLVGEISRNSLLLAQDPYGNYVVQYIIEKKVGGV----NVM 473
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR----------------PSIFTPCQHKYGNFVIQQA 262
L+G + +L+ + GSH+VEK R P+ Q Y N+VIQ A
Sbjct: 474 FELRGNYVKLATQKFGSHVVEKCIRFYPESRSQIVHELVSVPNFEQLVQDPYANYVIQSA 533
Query: 263 LRVTK 267
L TK
Sbjct: 534 LSKTK 538
>gi|449493598|ref|XP_004159368.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 731
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 54/281 (19%)
Query: 41 IVLLGKTEGGSLFLQ-KMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
I L+ K + G FLQ K + G D I KIF+ + +LM D +G +L
Sbjct: 418 IFLMAKDQHGCRFLQRKFMEGTDEDIE-KIFKEIIDRVVELMMDAFGNYLVQKLLEVCND 476
Query: 90 --------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS 123
R++QK+I+ L + +++SA +M +
Sbjct: 477 NQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKN 536
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ V CL+ L E+L+ AA N +LA GC L ++ R L++
Sbjct: 537 INGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLIN 596
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
I+ +A +S+D GNYVVQ +L L +E I L+G + +LS+ + S++VEK
Sbjct: 597 EITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQ 656
Query: 241 -------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
P Q YGN+ IQ AL T+G
Sbjct: 657 FAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEG 697
>gi|330801647|ref|XP_003288836.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
gi|325081082|gb|EGC34611.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
Length = 738
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 120/278 (43%), Gaps = 54/278 (19%)
Query: 44 LGKTEGGSLFLQKMLSGK-DSTITYKIFEAVYKYPFDLMTDGYG---------------- 86
L K + G FLQK L K DS IF V+ + +LM D YG
Sbjct: 434 LTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQR 493
Query: 87 ---------------CHL--ARSMQKLIKLLVGSP-CISLVISAAYRRFKDMMFSKEASS 128
CH+ +QKL++ L SP + +IS+ + + + +
Sbjct: 494 RQIVDKIAPNVETFACHVYGIHGIQKLLQYL--SPDQVDSIISSIKNKVIQLSKDSKGNY 551
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
++ L+ + N+ + A MN+ +E+ TH GC +N I+ + L+D I+ H
Sbjct: 552 LVQSFLKQFSPEVNQFVCDAIMNNIQEICTHKVGCTVVNRCIDNANPQQLEQLVDRITQH 611
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
+ L +D GNYVVQH+L + YS K+ L G ELS+ + S+++EK
Sbjct: 612 SLKLVQDQFGNYVVQHLLS-KNKSYSSKLIKSLLGNIAELSVQKFSSNVIEKCLQVADTE 670
Query: 241 -YQ-------RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
Y+ I Q KY NFVIQ AL V Q
Sbjct: 671 TYESIIKEITEADILNLLQDKYANFVIQTALDVADEAQ 708
>gi|239613522|gb|EEQ90509.1| RNA-binding protein [Ajellomyces dermatitidis ER-3]
Length = 1122
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L ++ + K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 685 NAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLC 744
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI+A R
Sbjct: 745 QKLLEYSNDEQRTALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINALRDRV 804
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 805 VELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQ 864
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L++ I+++A L +DP GNYVVQ++L L + + E IC +G LS + S++
Sbjct: 865 RARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNV 924
Query: 238 VEKYQRPS-----------IFTPCQ------HKYGNFVIQQAL 263
+EK R + + P + + N+V+Q A+
Sbjct: 925 IEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAM 967
>gi|254585741|ref|XP_002498438.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
gi|238941332|emb|CAR29505.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
Length = 900
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 55/291 (18%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---- 86
NA L Q +I L K + G FLQ L I++ Y +LMTD +G
Sbjct: 571 NATLDQFIGNIYSLCKDQHGCRFLQMQLDVLGPEAADAIYDETRDYTVELMTDSFGNYLI 630
Query: 87 -----------------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRF 117
H R++QKL++ + +VI++
Sbjct: 631 QKLLEKVTVDQRIFLARIAAPHFVRIASNPHGTRALQKLVECVSTEEEAQIVINSLKGSI 690
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
++ + ++ KCL+ L + + ++ AA H E+ATH GC L ++ +
Sbjct: 691 VELSKDLNGNHIVQKCLQKLQPKDVQFIFDAACQHCTEIATHRHGCCVLQRCLDHGSKAQ 750
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRC 233
L +++ H + L+ DP GNYVVQ+++ Y+ K+ LLK K ELSL +
Sbjct: 751 CQALCNILLKHVDHLTLDPFGNYVVQYIITKEVEQDSYDYTYKVVHLLKPKVVELSLHKF 810
Query: 234 GSHLVEKYQRPSIFTPC------------------QHKYGNFVIQQALRVT 266
GS+++EK R + + YGN+V+Q AL V+
Sbjct: 811 GSNVIEKIIRTRVVSETMIMEILNNRGDTDVPALLNDGYGNYVLQTALDVS 861
>gi|261194503|ref|XP_002623656.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588194|gb|EEQ70837.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1119
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L ++ + K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 682 NAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLC 741
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI+A R
Sbjct: 742 QKLLEYSNDEQRTALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINALRDRV 801
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 802 VELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQ 861
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L++ I+++A L +DP GNYVVQ++L L + + E IC +G LS + S++
Sbjct: 862 RARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNV 921
Query: 238 VEKYQRPS-----------IFTPCQ------HKYGNFVIQQAL 263
+EK R + + P + + N+V+Q A+
Sbjct: 922 IEKCIRTADPQSRSSLVEEMLVPSELEKMLRDSFANYVVQTAM 964
>gi|359492558|ref|XP_003634432.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Vitis
vinifera]
Length = 574
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 23/239 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK++ + +I + + L+ H R MQKL++ L IS+
Sbjct: 299 GNYVVQKLVEICNEEQRTQILLSATTNQYQLIFICLNMHGTRVMQKLLEYLTTPEQISIA 358
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA + + VI CL+ Q N L + E+AT+ GC L +
Sbjct: 359 MSALWPVTVALTKDTSGHHVIQHCLKLFSCQDNMYLIKEVAENCFEIATNRSGCCVLQSC 418
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLK---GKFE 226
+ +G R L+ I ++A L++D GNYVVQH++G LK E I +LLK G F
Sbjct: 419 VENSQGELREQLMAEIIANALPLAEDRYGNYVVQHLMG---LKIPEVITNLLKQFEGTFI 475
Query: 227 ELSLLRCGSHLVEKY-----------------QRPSIFTPCQHKYGNFVIQQALRVTKG 268
LS + GS++VEK+ + P++ +GNFVIQ AL V+KG
Sbjct: 476 SLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPNVSMLLLDPFGNFVIQSALSVSKG 534
>gi|327357037|gb|EGE85894.1| RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1043
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 50/283 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L ++ + K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 606 NAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLC 665
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI+A R
Sbjct: 666 QKLLEYSNDEQRTALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINALRDRV 725
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 726 VELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQ 785
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L++ I+++A L +DP GNYVVQ++L L + + E IC +G LS + S++
Sbjct: 786 RARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNV 845
Query: 238 VEKYQRPS-----------IFTPCQ------HKYGNFVIQQAL 263
+EK R + + P + + N+V+Q A+
Sbjct: 846 IEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAM 888
>gi|356518120|ref|XP_003527730.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 508
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 17/235 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +Q+M+ +I ++ + F L+ H R ++KL++ + LV
Sbjct: 231 GNYVVQRMVEICTEEQLSQIVLSLAQCNFQLVRICLSAHGIRGVEKLLERVTTQEQRDLV 290
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA + V++ CL+ + NE L N E+AT GCV L
Sbjct: 291 LSALCPGAAILAKDVNGHRVLLHCLKQFSGEDNENLLNVVANKCFEIATDKTGCVVLQQC 350
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
IN +G + LLD I H L++D GNYVVQH+L L +E + LKG+F L+
Sbjct: 351 INHAQGETKQKLLDAIILHVSLLAEDCYGNYVVQHLLSLKVPGVAESLLIQLKGRFFYLA 410
Query: 230 LLRCGSHLVEKY-----------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ GS++VE++ P++ YGN+VI+ AL +K
Sbjct: 411 CNKYGSNVVERFLQDSGEKHSTSIVLELLHNPNVAMLLVDPYGNYVIKSALSASK 465
>gi|302309271|ref|NP_986580.2| AGL086Cp [Ashbya gossypii ATCC 10895]
gi|299788279|gb|AAS54404.2| AGL086Cp [Ashbya gossypii ATCC 10895]
Length = 735
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 61/283 (21%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGS 103
L K + G FLQ+ L IFE Y +LMTD +G +L +QKL++ +
Sbjct: 419 LCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYL---IQKLVERVSAE 475
Query: 104 PCISLVISA---------------AYRRFKDMMFSKEASSVII----------------- 131
I+LV S+ A ++ + + ++E S +II
Sbjct: 476 QRITLVKSSADQFVSIALDPHGTRALQKLVECISTEEESRIIIASLKNSVVQLSKDLNGN 535
Query: 132 ----KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
KCL+ ++ ++ AA ++ATH GC L ++ +R L + +
Sbjct: 536 HVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCAQVLA 595
Query: 188 HAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ + L+ DP GNYVVQ++L L Y+ KI LK + ELSL + GS++VEK R
Sbjct: 596 NVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVEKILR 655
Query: 244 ------------------PSIFTPCQHKYGNFVIQQALRVTKG 268
P + +GN+V+Q AL V+K
Sbjct: 656 TSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTALDVSKA 698
>gi|374109827|gb|AEY98732.1| FAGL086Cp [Ashbya gossypii FDAG1]
Length = 735
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 61/283 (21%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGS 103
L K + G FLQ+ L IFE Y +LMTD +G +L +QKL++ +
Sbjct: 419 LCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYL---IQKLVERVSAE 475
Query: 104 PCISLVISA---------------AYRRFKDMMFSKEASSVII----------------- 131
I+LV S+ A ++ + + ++E S +II
Sbjct: 476 QRITLVKSSADQFVSIALDPHGTRALQKLVECISTEEESRIIIASLKNSVVQLSKDLNGN 535
Query: 132 ----KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
KCL+ ++ ++ AA ++ATH GC L ++ +R L + +
Sbjct: 536 HVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCAQVLA 595
Query: 188 HAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ + L+ DP GNYVVQ++L L Y+ KI LK + ELSL + GS++VEK R
Sbjct: 596 NVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVEKILR 655
Query: 244 ------------------PSIFTPCQHKYGNFVIQQALRVTKG 268
P + +GN+V+Q AL V+K
Sbjct: 656 TSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTALDVSKA 698
>gi|365986156|ref|XP_003669910.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
gi|343768679|emb|CCD24667.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
Length = 809
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 124/289 (42%), Gaps = 53/289 (18%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A L Q +I L K + G FLQK L + KIFE + +LMTD +G +L
Sbjct: 482 DATLDQFAGNIYSLCKDQHGCRFLQKQLDILGTEAADKIFEETKYHTIELMTDSFGNYLI 541
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +++++
Sbjct: 542 QKLIERVSTEQRTELAKIASPQFVEIALDPHGTRALQKLIECIDTDDEAKIIVASLSGSI 601
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+ + V+ KCL+ L + + ++ A + ++ATH GC L + +
Sbjct: 602 VQLSKDLNGNHVVQKCLQKLHPKDFQFIFDATCQNSVDIATHRHGCCVLQRCFDHGTKEQ 661
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLLRC 233
L D + H + L+ DP GNYVVQ+++ K Y+ KI LLK K ELS+ +
Sbjct: 662 CETLCDELLKHVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVHKF 721
Query: 234 GSHLVEKYQRPSIFTP------CQHK----------YGNFVIQQALRVT 266
GS+++EK R + T HK YGN+V+Q AL ++
Sbjct: 722 GSNVIEKLLRTPVATENMILELLNHKADIPNLLNDSYGNYVLQTALDIS 770
>gi|281202123|gb|EFA76328.1| hypothetical protein PPL_10093 [Polysphondylium pallidum PN500]
Length = 833
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 56/279 (20%)
Query: 44 LGKTEGGSLFLQKMLSGK-DSTITYKIFEAVYKYPFDLMTDGYG---------------- 86
L K + G FLQK L K D+ IF+ VY++ +LM D YG
Sbjct: 335 LTKYQAGCRFLQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYGQYLIPQLMKYCDNNQR 394
Query: 87 ---------------CHL--ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS- 128
CH+ +QK+++ L +++ S + K + SK+A
Sbjct: 395 KMIVDRIAPKVETFACHIYGIHGIQKVLQFLSPEQVDTIIASISD---KVISLSKDAKGN 451
Query: 129 -VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
+I L+T + N+ + A M + E+ TH GC +N I+ + L+D I++
Sbjct: 452 YLIQSFLKTFSPETNQFICDAIMKNVIEICTHKVGCTVVNRAIDCANKVQLEKLIDSITN 511
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
HA L +D GNYVVQH+L + Y+ K+ + G ELS+ + S+++EK
Sbjct: 512 HALQLVQDQFGNYVVQHLLT-NNKAYATKLIKSVIGNIAELSVQKFSSNVIEKCLQVANT 570
Query: 241 --YQ-------RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
Y+ I T Q KY NFVIQ AL V Q
Sbjct: 571 ETYESIVKELTEVDILTLLQDKYANFVIQTALDVADENQ 609
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 20/227 (8%)
Query: 60 GKDSTITYKI--FEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRF 117
G DS + KI E + + L GC R +QK ++ + ++L+ Y
Sbjct: 313 GPDSPLPMKITSLEEITGQIYHLTKYQAGC---RFLQKKLEEKPDAEHVTLIFKEVYEHL 369
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
++M +I + ++ D + +++ A H+ G + + + +
Sbjct: 370 IELMVDPYGQYLIPQLMKYCDNNQRKMIVDRIAPKVETFACHIYGIHGIQKVLQFLSPEQ 429
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
++ IS LSKD GNY++Q L + ++ IC + E+ + G +
Sbjct: 430 VDTIIASISDKVISLSKDAKGNYLIQSFLKTFSPETNQFICDAIMKNVIEICTHKVGCTV 489
Query: 238 V-------EKYQRPSIFTP--------CQHKYGNFVIQQALRVTKGF 269
V K Q + Q ++GN+V+Q L K +
Sbjct: 490 VNRAIDCANKVQLEKLIDSITNHALQLVQDQFGNYVVQHLLTNNKAY 536
>gi|293332512|ref|NP_001169625.1| uncharacterized protein LOC100383506 [Zea mays]
gi|224030501|gb|ACN34326.1| unknown [Zea mays]
gi|414865276|tpg|DAA43833.1| TPA: hypothetical protein ZEAMMB73_925464 [Zea mays]
Length = 694
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 47 TEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI 106
+ G+ +Q+M+ D +I A+ + P ++ H R +Q+LI+ + I
Sbjct: 421 SSAGNYLVQEMVEVCDEGQRLRIILALTQDPVKMIAISLNTHGTRVVQRLIEKVTSRELI 480
Query: 107 SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
L+ISA F ++ + VI KCL + N+ ++ A ++ +A GC L
Sbjct: 481 ILIISALQPGFMLLVNDPNGTHVIQKCLANFGAEDNKFIFEGAAANYFNMAVQRHGCCVL 540
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
I+ RG + L+ I +H L++D GNYVVQHVL + ++ SL +GK+
Sbjct: 541 QKCISTARGRYQANLIVKICAHGFELAQDIFGNYVVQHVLKQKIPYANARLASLFEGKYI 600
Query: 227 ELSLLRCGSHLVEKYQRPSIFTPCQHK----------------------YGNFVIQQALR 264
LS + S++V QR F P K Y N+VI AL
Sbjct: 601 YLSKQKVSSNVV---QRCIEFFPDDAKAVIVHEFLLLRGSHFEQLVTDPYANYVINTALN 657
Query: 265 VTKG 268
T+G
Sbjct: 658 NTRG 661
>gi|295658885|ref|XP_002790002.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282085|gb|EEH37651.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1154
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 33/243 (13%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L ++ + K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 601 NAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLC 660
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI A R
Sbjct: 661 QKLLEYSNDEQRTALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVIKALRGRV 720
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 721 VELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQ 780
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L++ I+ +A L +DP GNYVVQ++L L + + E IC +G LS + S++
Sbjct: 781 RARLIEQITKNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNV 840
Query: 238 VEK 240
+EK
Sbjct: 841 IEK 843
>gi|453088007|gb|EMF16048.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1055
Score = 84.3 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 33/239 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G FLQ+ L ++ IF+ V ++ +LM D +G +L
Sbjct: 631 EIYNLCKDQHGCRFLQRKLEERNEKTVQVIFDEVKEHMIELMVDPFGNYLCQKLLESAND 690
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + I L++ A ++
Sbjct: 691 NQRTILIENASPSMTKIALNQHGTRALQKMIEYISTPEQIQLIVKALGNDVVVLIQDLNG 750
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L ++ A H + TH GC L I+ G ++G ++D +
Sbjct: 751 NHVIQKCLNHLSSIDASFIFEAVGAHCITVGTHRHGCCVLQRCIDHADGLQKGQMVDHVI 810
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+A L +DP GNYVVQ++L L + ++E +C G+ LS + S+++EK R S
Sbjct: 811 RNAYALVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEVPALSRQKFSSNVIEKCIRCS 869
>gi|134055097|emb|CAK43737.1| unnamed protein product [Aspergillus niger]
Length = 765
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IFE + +LMTD +G +L
Sbjct: 362 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 421
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + VI + +++ + VI
Sbjct: 422 DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHVVELVQDLNGNHVI 481
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G ++ L+ I+++A
Sbjct: 482 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 541
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF 247
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R + F
Sbjct: 542 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADF 598
>gi|156084740|ref|XP_001609853.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
gi|154797105|gb|EDO06285.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
Length = 656
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 52/286 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I ++ K + G LQKML +D + I E V DLM D +G +L
Sbjct: 235 NIAIIAKDQTGCRLLQKMLETEDYLVVETILEGVMDNLVDLMMDPFGNYLCQKLITVCST 294
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++Q+LI++L I+ V + ++
Sbjct: 295 QQIDAIIDVAGPMLIDISLNMHGTRTLQRLIEVLHEPKQIAKVTKLLSPSVETLVTDING 354
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + E ++ A + ATH GC + I+ +R L++ +
Sbjct: 355 NHVIQKCLSVLPPEDCEFIHQAILKKSLMFATHRHGCCVIQRCIDAANTRQRDELVETLI 414
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL--------KGKFEE--------LSL 230
H L +DP GNYVVQ++L L ++ + +I + K KF L+
Sbjct: 415 EHTLELIQDPFGNYVVQYILKLKNMDVNARIVKAVAPKATLYAKHKFSSNVIEKCLILTH 474
Query: 231 LRCGSHLVEKYQRPSIFTPCQ---HKYGNFVIQQALRVTKGFQMTE 273
R + LVEK+ + T H +GN+VIQ+ L V + + E
Sbjct: 475 TRIRNILVEKFVKAPYDTLKDLMLHPFGNYVIQRVLSVAQRSDLDE 520
>gi|84996421|ref|XP_952932.1| pumilio-family RNA-binding protein [Theileria annulata strain
Ankara]
gi|65303929|emb|CAI76308.1| pumilio-family RNA-binding protein, putative [Theileria annulata]
Length = 830
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 64/297 (21%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ + + + G LQ+ L D+ T + V F LMTD +G +L
Sbjct: 266 NVASIAQDQTGCRMLQRQLECNDTVFTTAVLGEVLDNLFLLMTDPFGNYLCQKLMSVCDS 325
Query: 90 -----------------------ARSMQKLIKLLVGSPC--ISLVISAAYRRFKDMMFSK 124
R++QKLI+++ G+ I+ ++SA +++
Sbjct: 326 EQLGQIITACEPQFIPICLNMHGTRAIQKLIEVVSGTNVGRITAILSAG---VVELINDL 382
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI KCL L + E +Y A H LATH GC + I+ P+R L+D
Sbjct: 383 NGNHVIQKCLVALSSDECEFIYKAMNEHCVGLATHRHGCCVMQRCIDAASVPQRARLVDT 442
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRP 244
I++ L +D GNYV+Q+VL L D + +I +LL S + S++VE R
Sbjct: 443 IAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVALLCEDLTRFSKHKFSSNVVE---RC 499
Query: 245 SIFTPCQHK----------------------YGNFVIQQALRVTKGFQMTE-RNIIQ 278
IF P + +GN+VIQ+ L V + ++ + +IIQ
Sbjct: 500 LIFCPSSVRSNLVSRFLNLPFTVLHDLILDPFGNYVIQRVLNVAQPDELAQLLDIIQ 556
>gi|452986016|gb|EME85772.1| hypothetical protein MYCFIDRAFT_150818 [Pseudocercospora fijiensis
CIRAD86]
Length = 519
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---C--------- 87
+I L K + G FLQ+ L ++ IFE V + +LM D +G C
Sbjct: 89 EIYGLCKDQHGCRFLQRKLEERNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKLLESVND 148
Query: 88 ---------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QK+I+ + +I A ++
Sbjct: 149 EQRTALIVNAAPAMNKIALNQHGTRALQKMIEYITTPEQTQEIIKALRNDVVLLIQDLNG 208
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L ++ A N+ + TH GC L I+ G ++G ++D +
Sbjct: 209 NHVIQKCLNHLSSIDATFIFEAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVI 268
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
++A L +DP GNYVVQ++L L + ++E +C G+ LS + S+++EK
Sbjct: 269 ANAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIPALSRQKFSSNVIEK 322
>gi|358366888|dbj|GAA83508.1| RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 1002
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IFE + +LMTD +G +L
Sbjct: 599 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 658
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + VI + +++ + VI
Sbjct: 659 DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHVVELVQDLNGNHVI 718
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G ++ L+ I+++A
Sbjct: 719 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 778
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF 247
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R + F
Sbjct: 779 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADF 835
>gi|317025399|ref|XP_001388993.2| RNA-binding protein [Aspergillus niger CBS 513.88]
Length = 1000
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IFE + +LMTD +G +L
Sbjct: 597 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 656
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + VI + +++ + VI
Sbjct: 657 DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHVVELVQDLNGNHVI 716
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G ++ L+ I+++A
Sbjct: 717 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 776
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF 247
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R + F
Sbjct: 777 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADF 833
>gi|443895829|dbj|GAC73174.1| translational repressor MPT5/PUF4 and related RNA-binding proteins
[Pseudozyma antarctica T-34]
Length = 671
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
DI L K + G FLQK L + IF + + +LMTD +G +L
Sbjct: 233 DIFALCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQKMLEYCTD 292
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L I +I A ++
Sbjct: 293 EQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSMNVVTLIKDLNG 352
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL L + N+ +Y A H E+ATH GC L I+ +R L+ I+
Sbjct: 353 NHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQLVAEIT 412
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+A L +DP GNYVVQ+VL L ++++ + G LS+ + S+++EK
Sbjct: 413 YNALTLVQDPFGNYVVQYVLDLSIARFTDAVVRQFVGNVCLLSVQKFSSNVMEK 466
>gi|15237851|ref|NP_200736.1| pumilio 16 [Arabidopsis thaliana]
gi|313471419|sp|Q9FIE9.2|PUM16_ARATH RecName: Full=Putative pumilio homolog 16; Short=APUM-16;
Short=AtPUM16
gi|332009782|gb|AED97165.1| pumilio 16 [Arabidopsis thaliana]
Length = 332
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
++++QKL+ + A R F +M K AS V I+ + + K E++Y
Sbjct: 97 SKTLQKLMGM--SDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKRELMYDQI 154
Query: 150 MNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGL 208
+ + LA GC++LN I ++ P R LLD+++++A LS D GN+VVQHVL L
Sbjct: 155 LRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKL 214
Query: 209 GDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------QRPSIFTPC 250
D + + I L G ELS + GS++VE+ + +
Sbjct: 215 RDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEMLIRLA 274
Query: 251 QHKYGNFVIQQALRVTK 267
+ +YGNFV+ +AL +T
Sbjct: 275 RSEYGNFVVCKALELTN 291
>gi|398407841|ref|XP_003855386.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
gi|339475270|gb|EGP90362.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
Length = 1060
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 50/274 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G FLQ+ L ++ IFE V + +LM D +G +L
Sbjct: 617 EIYTLCKDQHGCRFLQRKLEERNEQTVQAIFEEVRNHMIELMVDPFGNYLCQKLLESAND 676
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + +L+I A ++
Sbjct: 677 DQRTELIKNAMPQMTKIALNQHGTRALQKMIEFISTPEQTALIIEALRNDVVLLIQDLNG 736
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L ++ A + + TH GC L I+ G ++G ++D +
Sbjct: 737 NHVIQKCLNHLSSNDAIFIFDAVGANCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVI 796
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS-----------LLRCGS 235
+A L +DP GNYVVQ++L L + ++E +C G+ LS +RC S
Sbjct: 797 RNAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIANLSRQKFSSNVMEKCIRCAS 856
Query: 236 HLVEKYQRPSIFTP------CQHKYGNFVIQQAL 263
+ ++ I P + + N+V+Q A+
Sbjct: 857 NETKRAIISEIMAPQTIEKMLRDGFANYVVQTAM 890
>gi|350638129|gb|EHA26485.1| hypothetical protein ASPNIDRAFT_55402 [Aspergillus niger ATCC 1015]
Length = 1507
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L ++ IFE + +LMTD +G +L
Sbjct: 597 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 656
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + VI + +++ + VI
Sbjct: 657 DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHVVELVQDLNGNHVI 716
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L + + +Y A + + TH GC L I+ G ++ L+ I+++A
Sbjct: 717 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 776
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF 247
L +DP GNYVVQ++L L + ++E +C +G LS + S+++EK R + F
Sbjct: 777 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADF 833
>gi|297797465|ref|XP_002866617.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
gi|297312452|gb|EFH42876.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
Length = 415
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 108 LVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN 167
++++A RRF D+M K + V I + + + L L +F A+ GC++LN
Sbjct: 151 ILLNAIVRRFIDIMTGKYSYLVAITAFKVSESFELVSLTLRDALYF---ASDEIGCIALN 207
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
I E R IS +A++LS D SGN+VVQHVL DL+ + ++ L G + E
Sbjct: 208 QIITESNNIFRYEFFHEISENADWLSMDDSGNFVVQHVLNFHDLECTNRVAFRLCGYYVE 267
Query: 228 LSLLRCGSHLVEKYQRP-------------------SIFTPCQHKYGNFVIQQALRVTK 267
LS R GS++VE+ +++ Q +GN+V+Q+ALRVT+
Sbjct: 268 LSFERRGSYIVEQILESGSMIALDLVVSELMECGGFTLWRLAQDAFGNYVVQKALRVTR 326
>gi|409051228|gb|EKM60704.1| hypothetical protein PHACADRAFT_246773 [Phanerochaete carnosa
HHB-10118-sp]
Length = 976
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QK+L I E+V + DL+ H R++QK+I L I +
Sbjct: 590 GNYLCQKLLEYCTDEQRNLICESVAQ---DLVNISLNMHGTRAVQKMIDFLSTRRQIHSI 646
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I A ++ + VI KCL L + N+ +Y A + E+ATH GC L
Sbjct: 647 IVALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRC 706
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
++ P+R L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS
Sbjct: 707 VDHASEPQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALS 766
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ + S+++EK R + + YGN+ +Q AL + Q
Sbjct: 767 VQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYAEPTQ 824
>gi|378727687|gb|EHY54146.1| hypothetical protein HMPREF1120_02321 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------- 89
L K + G +LQ+ L + IF + +LMTD +G +L
Sbjct: 596 LCKDQHGCRYLQRKLEDGNEEHIQAIFAETCPHIIELMTDPFGNYLCQKLFEFCTEEQRT 655
Query: 90 -------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
R++QK+I+ + + +I A R D++ + V+
Sbjct: 656 ALINTAAPALTTIALNQHGTRALQKMIEFVRTEEQVETIIRALSDRVVDLVQDLNGNHVV 715
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
KCL L ++++ +Y A + + TH GC L I+ +G +R L+ I+ A
Sbjct: 716 QKCLTRLGAERSQFIYDAVGKYCVVVGTHRHGCCVLQRCIDHAQGFQRAQLIARITHCAF 775
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +DP GNYVVQ++L L ++ +++ +C G+ +LS + S+++EK
Sbjct: 776 DLVQDPFGNYVVQYILDLDEISFTKPLCESFLGRIPQLSKQKFSSNVIEK 825
>gi|171689290|ref|XP_001909585.1| hypothetical protein [Podospora anserina S mat+]
gi|170944607|emb|CAP70718.1| unnamed protein product [Podospora anserina S mat+]
Length = 700
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 33/244 (13%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG--- 86
+N L + + +I L + + G FLQK L + + I+ V + +LM D +G
Sbjct: 279 QNMTLEKAEGNINSLARDQHGCRFLQKQLENRIPHEVHAIYREVLPHVHELMIDPFGNYL 338
Query: 87 -------C-----------------------HLARSMQKLIKLLVGSPCISLVISAAYRR 116
C H R++QK+I+ + I ++ A +
Sbjct: 339 CQKLLEYCTDDERTELIKNSAKDMVPIALNQHGTRALQKMIEHVSNEVQIQMITDALKMQ 398
Query: 117 FKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP 176
++ + VI KCL L +++ ++ A + ++ TH GC L I+ G
Sbjct: 399 VVTLIQDLNGNHVIQKCLNKLSPEQSHFIFNAVGENCIDVGTHRHGCCVLQRCIDHANGQ 458
Query: 177 RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSH 236
++ L+ I+++A L +DP GNYV+Q+++ L + ++E + + + LS L+ S+
Sbjct: 459 QKAWLIQCITNNAYRLVQDPFGNYVIQYIIDLNEPSFTEPLVAQFRTHILTLSKLKFSSN 518
Query: 237 LVEK 240
+VEK
Sbjct: 519 VVEK 522
>gi|66815363|ref|XP_641698.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
gi|60469729|gb|EAL67717.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
Length = 782
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 120/279 (43%), Gaps = 56/279 (20%)
Query: 44 LGKTEGGSLFLQKMLSGK-DSTITYKIFEAVYKYPFDLMTDGYG---------------- 86
L K + G FLQK L K DS IF V+ + +LM D YG
Sbjct: 478 LTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQR 537
Query: 87 ---------------CHL--ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE--AS 127
CH+ +QKL++ L S++ S + K + SK+ +
Sbjct: 538 RQIVDKIAPSVETFACHVYGIHGIQKLLQYLSPDQVESIIASI---KGKVIQLSKDNKGN 594
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
+I L+ + N+ + A M + E+ TH GC +N I+ + L+D I+
Sbjct: 595 YLIQSFLKQFSPEVNQFVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLVDKITE 654
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
H+ L +D GNYVVQH+L + YS K+ LK ELS+ + S+++EK
Sbjct: 655 HSLKLVQDQFGNYVVQHLLS-KNKAYSSKLIVSLKDNIAELSIQKFSSNVIEKCLQLADT 713
Query: 241 --YQ-------RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
Y+ I + Q KY NFVIQ AL V+ Q
Sbjct: 714 PTYELIIKALTEADILSLLQDKYANFVIQTALDVSNDTQ 752
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 88/225 (39%), Gaps = 24/225 (10%)
Query: 86 GCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVL 145
GC R +QK ++ S ++L+ + + ++M +I + ++ D + +
Sbjct: 484 GC---RFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQI 540
Query: 146 YLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHV 205
A HV G + + + + ++ I LSKD GNY++Q
Sbjct: 541 VDKIAPSVETFACHVYGIHGIQKLLQYLSPDQVESIIASIKGKVIQLSKDNKGNYLIQSF 600
Query: 206 LGLGDLKYSEKICSLLKGKFEELSLLRCG----------------SHLVEKYQRPSIFTP 249
L + ++ +C + G EE+ + G LV+K S+
Sbjct: 601 LKQFSPEVNQFVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLVDKITEHSLKL- 659
Query: 250 CQHKYGNFVIQQALRVTKGFQ----MTERNIIQELGQSSFIQGIV 290
Q ++GN+V+Q L K + ++ ++ I EL F ++
Sbjct: 660 VQDQFGNYVVQHLLSKNKAYSSKLIVSLKDNIAELSIQKFSSNVI 704
>gi|302657003|ref|XP_003020235.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291184046|gb|EFE39617.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 927
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI A + +++ + VI KCL L + +Y
Sbjct: 586 HGTRALQKMIEFISTPEQIQTVIHALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 645
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q++L
Sbjct: 646 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILD 705
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF-----------TP------C 250
LG+ ++ +C+ +G LS + S+++EK R S F +P
Sbjct: 706 LGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNML 765
Query: 251 QHKYGNFVIQQAL 263
+ + N+VIQ A+
Sbjct: 766 RDSFANYVIQTAM 778
>gi|342879890|gb|EGU81123.1| hypothetical protein FOXB_08397 [Fusarium oxysporum Fo5176]
Length = 1061
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 38/258 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQK L +++ + I+ ++ +LMTD +G +L
Sbjct: 610 NIYELCKDQHGCRYLQKKLEERNADQVHIIWVETNQHVIELMTDPFGNYLCQKLLEFCND 669
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + + ++I A R +++
Sbjct: 670 DERTVLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHIIIEALRYRVVELIQDLNG 729
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + ++ A E+ TH GC L I+ G ++ L+ I+
Sbjct: 730 NHVIQKCLNKLTPPDAQFIFDAVGGSCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRIT 789
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
HA L +DP GNYVVQ+++ L + ++E I K +LS + S+++EK R +
Sbjct: 790 EHARILVQDPFGNYVVQYIIDLNEPLFTEPIVLTFKDCITQLSRHKFSSNVIEKCLRCA- 848
Query: 247 FTPCQHKYGNFVIQQALR 264
Q + ++++ LR
Sbjct: 849 ----QPPSKDLIVEELLR 862
>gi|299755883|ref|XP_001828946.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298411424|gb|EAU92953.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 982
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 38/261 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I L K + G +LQK L IF +K+ +LMTD +G
Sbjct: 564 EIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFKHFAELMTDPFGNYLCQKLLEFATD 623
Query: 87 --------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QK+I L I +I A ++
Sbjct: 624 DQRNLICESVAQDLVNISLNMHGTRAVQKMIDFLSTRRQIHSIILALSLHVVSLIKDLNG 683
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L++ I+
Sbjct: 684 NHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEAQRIQLVNEIT 743
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
+A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++EK R +
Sbjct: 744 YNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFLGNICALSVQKFSSNVMEKCIRVA- 802
Query: 247 FTPCQHKYGNFVIQQALRVTK 267
+H VI++ L T+
Sbjct: 803 ----EHNTRKLVIEELLNRTR 819
>gi|294654650|ref|XP_456710.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
gi|199429043|emb|CAG84666.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
Length = 808
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QKLI+ + L+I++ R + + V+ KCL+ L ++N+ ++
Sbjct: 578 HGTRALQKLIECITTEEESRLIINSLSPRIVALSRDLNGNHVVQKCLQRLKPEENQFIFE 637
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A H E+ATH GC L ++ +R L ++ +A LS DP GNYVVQ+VL
Sbjct: 638 TASLHCNEIATHRHGCCVLQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYVLS 697
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPC----------------Q 251
GD + I +K LSL + GS+++EK R + T
Sbjct: 698 RGDDESIRIILDHIKANVVSLSLHKFGSNVIEKSLRINKLTDSLIDVLLLNKERFSEMLN 757
Query: 252 HKYGNFVIQQALRVTKGFQMTERNIIQELGQ-SSFIQGIVP 291
+GN+V+Q +L V +++LG+ S +Q ++P
Sbjct: 758 DAFGNYVLQTSLDVAN---------VRDLGKLSQALQPLLP 789
>gi|255538126|ref|XP_002510128.1| RNA binding protein, putative [Ricinus communis]
gi|223550829|gb|EEF52315.1| RNA binding protein, putative [Ricinus communis]
Length = 542
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 25/245 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIK--------LLV 101
G+ +QK++ +I AV K L++ H R++QKL++ +
Sbjct: 261 GNYVVQKLVEVCSEEQRTRILLAVTKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSIT 320
Query: 102 GSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVR 161
+SL++SA ++ VI CLE + N+ L ++ ++AT
Sbjct: 321 ARQQVSLIMSALSSGAVELAKDMNGHHVIKYCLEHFLPEDNKYLLKVVADNCFDIATDKS 380
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL 221
GC L ++ G R L+ I++ A L++D GNYV+QH+LGL + + + L
Sbjct: 381 GCCVLQQCVDHSMGEPRDRLVASITNIALRLAQDRYGNYVIQHLLGLRNPLITANLFRQL 440
Query: 222 KGKFEELSLLRCGSHLVEKYQRPS------------IFTPCQ-----HKYGNFVIQQALR 264
+G F LS + GS++VEK S + +PC YGNFVIQ AL+
Sbjct: 441 EGYFAVLSCDKFGSNVVEKCLLESRAEQCTQIISELLRSPCSSMLLVDPYGNFVIQSALK 500
Query: 265 VTKGF 269
V+KG
Sbjct: 501 VSKGL 505
>gi|344231266|gb|EGV63148.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 387
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 63/299 (21%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLS-GKD-------------STITYKIFEAVYKY 76
NA L +I L K + G FLQ+ L GKD IF +Y
Sbjct: 52 NAKLEDFTGEIFSLCKDQHGCRFLQRQLDLGKDIENKQNANNILSSDIAATMIFNEIYLK 111
Query: 77 PFDLMTDGYGCHL---------------------------------ARSMQKLIKLLVGS 103
+LM D +G +L R++QKL++ +
Sbjct: 112 IIELMIDPFGNYLIQKLFENVSVDQRIILVKNAAPDFIRIALDPHGTRALQKLVECISTE 171
Query: 104 PCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGC 163
L+I + + V+ KCL+ L ++N+ ++ A +H ++ATH GC
Sbjct: 172 AECKLIIDNLSPHIVSLSRDLNGNHVVQKCLQKLSSKQNQFIFDTASSHCNDIATHRHGC 231
Query: 164 VSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKG 223
L ++ +R L I+ +A LS DP GNYVVQ+VL GD + I + +K
Sbjct: 232 CVLQRCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVLSRGDEQSVAIILNHIKS 291
Query: 224 KFEELSLLRCGSHLVEKYQRPSIFTP----------------CQHKYGNFVIQQALRVT 266
LSL + GS+++EK R S T +GN+V+Q +L V
Sbjct: 292 HLIVLSLHKFGSNVIEKSLRISKLTNGLVQALLMNADHFQDLLNDPFGNYVLQTSLDVA 350
>gi|326468643|gb|EGD92652.1| RNA-binding protein [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI A + +++ + VI KCL L + +Y
Sbjct: 708 HGTRALQKMIEFISTPEQIQTVIHALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 767
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q++L
Sbjct: 768 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILD 827
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF-----------TP------C 250
LG+ ++ +C+ +G LS + S+++EK R S F +P
Sbjct: 828 LGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNML 887
Query: 251 QHKYGNFVIQQAL 263
+ + N+VIQ A+
Sbjct: 888 RDSFANYVIQTAM 900
>gi|392597028|gb|EIW86350.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 981
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QK+L I E+V + DL+ H R++QK+I L I +
Sbjct: 584 GNYLCQKLLEYSTDEQRNLICESVAQ---DLVNISLNMHGTRAVQKMIDFLSTRRQIHSI 640
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I A ++ + VI KCL L + N+ +Y A + E+ATH GC L
Sbjct: 641 ILALSLHVVVLIKDLNGNHVIQKCLNKLSPEDNQFIYNAVAANCVEVATHRHGCCVLQRC 700
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I+ +R L++ I+ +A L +DP GNYVVQ+VL L D ++SE + G LS
Sbjct: 701 IDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYVLDLNDNRFSEGVIRQFTGNVCALS 760
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ + S+++EK R + + YGN+ +Q AL + Q
Sbjct: 761 VQKFSSNVIEKCIRVAEHSTRKILIEEVLNRSRLEKLLRDSYGNYCVQTALDYAEASQ 818
>gi|326479871|gb|EGE03881.1| RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI A + +++ + VI KCL L + +Y
Sbjct: 708 HGTRALQKMIEFISTPEQIQTVIHALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 767
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q++L
Sbjct: 768 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILD 827
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF-----------TP------C 250
LG+ ++ +C+ +G LS + S+++EK R S F +P
Sbjct: 828 LGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNML 887
Query: 251 QHKYGNFVIQQAL 263
+ + N+VIQ A+
Sbjct: 888 RDSFANYVIQTAM 900
>gi|313471420|sp|Q9C8B8.2|PUM17_ARATH RecName: Full=Putative pumilio homolog 17; Short=APUM-17;
Short=AtPUM17
Length = 332
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
++S+QKL+++ V A R F +M K AS V I+ + + K E++Y
Sbjct: 97 SKSLQKLMRMSDDMDVFFFV--AIMRLFIHVMIDKYASYVAIQGMRIFKQDKRELMYDHI 154
Query: 150 MNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGL 208
+ + LA GC++LN I E+ P R L+D++S++A LS D GN+VVQHVL L
Sbjct: 155 LRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKL 214
Query: 209 GDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
D + + I L G ELS + GS++VE+
Sbjct: 215 HDSRCTGNIADKLCGYCVELSFKKYGSYIVER 246
>gi|327300785|ref|XP_003235085.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462437|gb|EGD87890.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1049
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI A + +++ + VI KCL L + +Y
Sbjct: 708 HGTRALQKMIEFISTPEQIQTVIHALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 767
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q++L
Sbjct: 768 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILD 827
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF-----------TP------C 250
LG+ ++ +C+ +G LS + S+++EK R S F +P
Sbjct: 828 LGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNML 887
Query: 251 QHKYGNFVIQQAL 263
+ + N+VIQ A+
Sbjct: 888 RDSFANYVIQTAM 900
>gi|302505595|ref|XP_003014504.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178325|gb|EFE34115.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 1094
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI A + +++ + VI KCL L + +Y
Sbjct: 753 HGTRALQKMIEFISTPEQIQTVIHALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 812
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q++L
Sbjct: 813 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILD 872
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF-----------TP------C 250
LG+ ++ +C+ +G LS + S+++EK R S F +P
Sbjct: 873 LGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNML 932
Query: 251 QHKYGNFVIQQAL 263
+ + N+VIQ A+
Sbjct: 933 RDSFANYVIQTAM 945
>gi|303319247|ref|XP_003069623.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109309|gb|EER27478.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1003
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q ++ L K + G +LQ+ L + IF + + +LMTD +G +L
Sbjct: 576 NVPLEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLC 635
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI A +
Sbjct: 636 QKLLEFSNDEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 695
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
D++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 696 VDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQ 755
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L+ I++ + L +DP GNYVVQ++L L + +++E +C GK LS + S++
Sbjct: 756 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 815
Query: 238 VEKYQRPSIF 247
+EK R + F
Sbjct: 816 IEKCLRTADF 825
>gi|320040960|gb|EFW22893.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 1023
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q ++ L K + G +LQ+ L + IF + + +LMTD +G +L
Sbjct: 596 NVPLEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLC 655
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI A +
Sbjct: 656 QKLLEFSNDEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 715
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
D++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 716 VDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQ 775
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L+ I++ + L +DP GNYVVQ++L L + +++E +C GK LS + S++
Sbjct: 776 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 835
Query: 238 VEKYQRPSIF 247
+EK R + F
Sbjct: 836 IEKCLRTADF 845
>gi|392865282|gb|EAS31064.2| RNA-binding protein [Coccidioides immitis RS]
Length = 1023
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
N L Q ++ L K + G +LQ+ L + IF + + +LMTD +G +L
Sbjct: 596 NVPLEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLC 655
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI A +
Sbjct: 656 QKLLEFSNDEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 715
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
D++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 716 VDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQ 775
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L+ I++ + L +DP GNYVVQ++L L + +++E +C GK LS + S++
Sbjct: 776 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 835
Query: 238 VEKYQRPSIF 247
+EK R + F
Sbjct: 836 IEKCLRTADF 845
>gi|388855017|emb|CCF51344.1| uncharacterized protein [Ustilago hordei]
Length = 1013
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 33/239 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
DI L K + G FLQK L IF + + +LMTD +G +L
Sbjct: 534 DIFALCKDQHGCRFLQKKLEESMPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTD 593
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L I +I A ++
Sbjct: 594 EQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTRRQIHSIIVALSMNVVTLIKDLNG 653
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL L + N+ +Y A H E+ATH GC L I+ +R L+ I+
Sbjct: 654 NHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQLVAEIT 713
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+A L +DP GNYVVQ+VL L ++++ + G LS+ + S+++EK R S
Sbjct: 714 YNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKCIRVS 772
>gi|71018695|ref|XP_759578.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
gi|46099336|gb|EAK84569.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
Length = 1058
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---C--------- 87
DI L K + G FLQK L + IF + + +LMTD +G C
Sbjct: 544 DIFALCKDQHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTD 603
Query: 88 ---------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QK+I L I +I A ++
Sbjct: 604 EQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSMNVVTLIKDLNG 663
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL L + N+ +Y A H E+ATH GC L I+ +R L+ I+
Sbjct: 664 NHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQLVAEIT 723
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+A L +DP GNYVVQ+VL L ++++ + G LS+ + S+++EK
Sbjct: 724 YNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEK 777
>gi|296422247|ref|XP_002840673.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636894|emb|CAZ84864.1| unnamed protein product [Tuber melanosporum]
Length = 971
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 57/279 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 598 NIYELCKDQHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFGNYLCQKLLEYAND 657
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I+ + I VI A + +++
Sbjct: 658 EQRTVLVNTAAPQLVKIALNQHGTRALQKMIEYITTPEQICTVIHALQSKVVELIQDLNG 717
Query: 127 SSVIIKCLETLDEQKNEVLYL--AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI KCL +++N++ ++ A + TH GC L I+ G ++ L+
Sbjct: 718 NHVIQKCLNRWKKEENKLQFIFDAVGEDCVAVGTHRHGCCVLQRCIDHAAGAQKVKLIQK 777
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRP 244
I++HA L DP GNYVVQ++L L D SE + +G+ ELS + S+++EK R
Sbjct: 778 ITAHAIELVVDPFGNYVVQYILDLADPMLSEPLILKFRGRVCELSKQKFSSNVIEKCIR- 836
Query: 245 SIFTPCQHK--------------------YGNFVIQQAL 263
+ P K Y N+VIQ A+
Sbjct: 837 -VAEPPTKKILIEEMLPNQAELEALLRDSYANYVIQTAM 874
>gi|297852018|ref|XP_002893890.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
gi|297339732|gb|EFH70149.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 18/244 (7%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L D I + P +L+ + R +QK+I+ +
Sbjct: 291 VVELSMDPFGNYIVQKLLEVSDEEQRTLIVSVLTSKPRELIQICLNTYGTRVVQKMIETV 350
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
I+LV F ++ + VI CL+TL N+ + AA + E+A H
Sbjct: 351 KTKQQIALVKFGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNKFVLEAATKYCAEIAIHR 410
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L ++ G +R L+ IS +A LS+DP GNYVVQ++ + + K+
Sbjct: 411 HGCCVLQCCLSNSVGLQRERLVAEISRNALHLSQDPFGNYVVQYL--IEQQVSAVKLLVR 468
Query: 221 LKGKFEELSLLRCGSHLVEKYQR----------------PSIFTPCQHKYGNFVIQQALR 264
+ + EL+ + SH++EK R P+ Q Y N+VIQ AL
Sbjct: 469 FRMHYAELATQKFSSHVIEKCLRKYPESRAEIVRELICVPNFEYLLQDPYANYVIQTALS 528
Query: 265 VTKG 268
VTKG
Sbjct: 529 VTKG 532
>gi|449300578|gb|EMC96590.1| hypothetical protein BAUCODRAFT_24332 [Baudoinia compniacensis UAMH
10762]
Length = 1160
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 4 GGRRPDLNRGIGIANLSTSIGPGTYGKNAL-LAQPDYDIVLLGKTEGGSLFLQKMLSGKD 62
GR PD + L+ Y N+L + Q +I L K + G +LQ+ L +
Sbjct: 684 AGRIPDTRMTVQQRRLANEEAQTRY--NSLTVGQLTGEIYSLCKDQHGCRYLQRKLDERA 741
Query: 63 STITYKIFEAVYKYPFDLMTDGYGCHL--------------------------------- 89
+F + + +LMTD +G +L
Sbjct: 742 DNAVEIVFVEIKDHIIELMTDPFGNYLCQKLLECTDDEQRTVLIKNSASSMTKIALNQHG 801
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
R++QK+I+ + I ++I A ++ + VI KCL L + + ++ +
Sbjct: 802 TRALQKMIEYISTPQQIQIIIEALRYDVVLLIQDLNGNHVIQKCLNHLSPENAQFIFDSV 861
Query: 150 MNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLG 209
+ + TH GC L I+ G ++G L+D + ++A L +DP GNYVVQ++L LG
Sbjct: 862 GTNCIAVGTHRHGCCVLQRCIDHASGLQKGALVDQVINNAFALVQDPFGNYVVQYILDLG 921
Query: 210 DLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ ++E +C + LS + S++VEK R
Sbjct: 922 EPCFTEPLCQSFAHQVAYLSKQKFSSNVVEKCIR 955
>gi|393247747|gb|EJD55254.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1028
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QK++ I E+V + DL+T H R++QK+I L I +
Sbjct: 631 GNYLCQKLVEFSSDEQRNVICESVAQ---DLVTISLNMHGTRAVQKMIDFLSTPRQIHAI 687
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I A ++ + VI KCL L + N+ +Y A + E+ATH GC L
Sbjct: 688 IVALSLHVVTLIKDLNGNHVIQKCLNKLVPEDNQFIYNAVAQNCVEVATHRHGCCVLQRC 747
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I+ +R L+ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS
Sbjct: 748 IDHASDSQRVQLVQEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFSGNVCALS 807
Query: 230 LLRCGSHLVEK-------YQRPSIFTPCQHK----------YGNFVIQQALRVTKGFQ 270
+ + S+++EK + R + H+ +GN+ +Q AL + Q
Sbjct: 808 VQKFSSNVIEKCVRVAEPHTRKLLIDELLHRNRLEKLLRDSFGNYCVQTALDYAEPTQ 865
>gi|401625713|gb|EJS43708.1| puf4p [Saccharomyces arboricola H-6]
Length = 898
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q +I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 568 DAVLDQYIGNIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 627
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 628 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECITTDEEAQIVVDSL--RP 685
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A ++ ++ATH GC L ++
Sbjct: 686 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDHGSR 745
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK K ELS+
Sbjct: 746 EQCETLCDKLLTLVDKLTLDPFGNYVVQYIITKESAKNKYDYTHKIVHLLKPKVIELSIH 805
Query: 232 RCGSHLVEK-YQRPSIFTPC-----------------QHKYGNFVIQQALRVT 266
+ GS+++EK + P + P YGN+V+Q AL ++
Sbjct: 806 KFGSNVIEKILKTPIVSEPMILEILNNGGEAGIQSLLNDSYGNYVLQTALDIS 858
>gi|71028510|ref|XP_763898.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350852|gb|EAN31615.1| RNA-binding protein, putative [Theileria parva]
Length = 915
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ + + + G LQ+ L D+ T + V F LMTD +G +L
Sbjct: 292 NVAAIAQDQTGCRMLQRQLECSDTAFTSAVLREVLDNLFLLMTDPFGNYLCQKLMSVCDA 351
Query: 90 -----------------------ARSMQKLIKLLVGSPC--ISLVISAAYRRFKDMMFSK 124
R++QKLI+++ G+ I+ ++SA +++
Sbjct: 352 GQLGDIITGCETQFIPICLNMHGTRAIQKLIEVVSGNNVNRITAILSAG---VVELINDL 408
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI KCL L E +Y A H LATH GC + I+ +R L+D
Sbjct: 409 NGNHVIQKCLVALSSDDCEFIYRAMNEHCVGLATHRHGCCVMQRCIDAASPTQRAKLVDT 468
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRP 244
I++ L +D GNYV+Q+VL L D + +I SLL + S + S++VE R
Sbjct: 469 IAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVSLLCEDLTKFSKHKFSSNVVE---RC 525
Query: 245 SIFTPCQ----------------------HKYGNFVIQQALRVTKGFQMTE-RNIIQ 278
IF P +GN+VIQ+ L V + ++ +IIQ
Sbjct: 526 LIFCPSSVRSNLVSRFLNLPFSVLHDLILDPFGNYVIQRVLNVAQPDELAHLLDIIQ 582
>gi|409083297|gb|EKM83654.1| hypothetical protein AGABI1DRAFT_88582 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 979
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 50/281 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQK L IF + + +LMTD +G +L
Sbjct: 539 EIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATD 598
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L I +I A ++
Sbjct: 599 EQRNLICESVAQELVNISLNMHGTRAVQKMIDFLSTRRQIHSIILALSLHVVALIKDLNG 658
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L++ I+
Sbjct: 659 NHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQLVNEIT 718
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+A L +DP GNYVVQ++L L D ++S+ + +G LS+ + S+++EK
Sbjct: 719 YNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEKCVRVAE 778
Query: 241 -----------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
R + + YGN+ +Q AL + Q
Sbjct: 779 HSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTALDYAEPAQ 819
>gi|313471417|sp|Q9XI17.2|PUM20_ARATH RecName: Full=Putative pumilio homolog 20; Short=APUM-20;
Short=AtPUM20
Length = 332
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 117/234 (50%), Gaps = 38/234 (16%)
Query: 85 YGCHLARSM---QKLIKLLVGSPCISLVISAA-YRRFKDMMFSKEASSVIIKCLETLDEQ 140
Y +AR+M +++ KLL + + + +AA RRF ++ K AS V+ + + D++
Sbjct: 93 YFLMIARNMNGSKRIQKLLGKTDDVDALFAAAILRRFLHIITDKYASYVVRRGMTVFDKK 152
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
K + +Y +++ +A G ++LN+ I + R L D+I+ A LS D GN+
Sbjct: 153 KKKAMYEHILHYASHIARDKHGNLALNDIITD---AYRNKLFDVIAHKALVLSNDAYGNF 209
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE-----------------KYQR 243
V+Q VL L DL+ I L+G F +LS + GS++V+ + +
Sbjct: 210 VIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLETKESMVVVVEELMECEG 269
Query: 244 PSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIV----PFN 293
+ +++YGNF++ +ALRVT+ +E+ ++ G+V PF+
Sbjct: 270 DMLMRLARNEYGNFLVCKALRVTQ----------KEMVRTDLFWGLVHKLKPFH 313
>gi|260947166|ref|XP_002617880.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
gi|238847752|gb|EEQ37216.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
Length = 707
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 139/323 (43%), Gaps = 70/323 (21%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKML-----------SG--KDSTITYKIFEAVYKYP 77
NA L+ DI L K + G FLQ+ L SG + IF +Y
Sbjct: 374 NAKLSDFSGDIYSLCKDQHGCRFLQRQLDLGMEAKRSEESGVLSNEVAATMIFNEIYMKI 433
Query: 78 FDLMTDGYGCHLARSM-------QKLIKLLVGSPCISLVI-----SAAYRRFKDMMFSKE 125
+LMTD +G +L + + Q+LI + +P + + + A ++ + + +KE
Sbjct: 434 VELMTDPFGNYLIQKLFENVSADQRLILVKNAAPELIRIALDPHGTRALQKLVECIDTKE 493
Query: 126 ASSVII---------------------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCV 164
S +II KCL+ L + N+ ++ AA H E+ATH GC
Sbjct: 494 ESQLIINSLSPHIVPLSRDLNGNHVVQKCLQELKAEDNQFIFDAASEHCIEIATHRHGCC 553
Query: 165 SLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGK 224
L ++ +R L ++ +A LS DP GNYVVQ+VL GD + + + ++
Sbjct: 554 VLQRCLDHGNSSQRKQLSLKVAENATKLSLDPFGNYVVQYVLSRGDEESITIVLNHIRAN 613
Query: 225 FEELSLLRCGSHLVEKYQRPSIFTP----------------CQHKYGNFVIQQALRVTKG 268
LSL + GS+++EK R + T +GN+V+Q +L V
Sbjct: 614 VISLSLHKFGSNVIEKSLRINKLTNEVIAVLLENSDKFSMLLNDAFGNYVLQTSLDVASA 673
Query: 269 FQMTERNIIQELGQSSFIQGIVP 291
+ +L QS +Q ++P
Sbjct: 674 SDLA------KLAQS--LQPLLP 688
>gi|385252070|pdb|4DZS|A Chain A, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
gi|385252071|pdb|4DZS|B Chain B, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
Length = 357
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 27 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 86
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 87 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 144
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 145 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 204
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 205 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 264
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 265 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 317
>gi|426201649|gb|EKV51572.1| hypothetical protein AGABI2DRAFT_114299 [Agaricus bisporus var.
bisporus H97]
Length = 975
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 50/281 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G +LQK L IF + + +LMTD +G +L
Sbjct: 535 EIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATD 594
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L I +I A ++
Sbjct: 595 EQRNLICESVAQELVNISLNMHGTRAVQKMIDFLSTRRQIHSIILALSLHVVALIKDLNG 654
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L++ I+
Sbjct: 655 NHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQLVNEIT 714
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+A L +DP GNYVVQ++L L D ++S+ + +G LS+ + S+++EK
Sbjct: 715 YNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEKCVRVAE 774
Query: 241 -----------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
R + + YGN+ +Q AL + Q
Sbjct: 775 HSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTALDYAEPAQ 815
>gi|319411787|emb|CBQ73830.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---C--------- 87
DI L K + G FLQK L + IF + + +LMTD +G C
Sbjct: 534 DIFALCKDQHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTD 593
Query: 88 ---------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QK+I L I +I A ++
Sbjct: 594 EQRNLIVELVASELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSMNVVTLIKDLNG 653
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL L + N+ +Y A H E+ATH GC L I+ +R L+ I+
Sbjct: 654 NHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQLVAEIT 713
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+A L +DP GNYVVQ+VL L ++++ + G LS+ + S+++EK
Sbjct: 714 YNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVMEK 767
>gi|124506293|ref|XP_001351744.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23504673|emb|CAD51551.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|24849849|gb|AAM28242.1| RNA-binding protein Puf1 [Plasmodium falciparum]
Length = 1894
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 63/305 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I + K + G LQ++L K+ +I+ + +LM D +G
Sbjct: 827 NICKIAKDQTGCRILQRILEKKNPKHIEEIYNEALDHIIELMVDPFGNYLCQKLMEVCTS 886
Query: 87 --------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QKLI+++ I A ++
Sbjct: 887 EQIEKIIDKSSDQLINASISVHGTRTVQKLIEMIKTPSQIKKTTKALKNSIITLIKDING 946
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL TL + + +Y A +N+ E++TH GC + I+ ++ + IS
Sbjct: 947 NHVVQKCLITLTSHQCDFIYEAILNNCVEVSTHRHGCCVIQRCIDSANEAQKELFIRNIS 1006
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQ---- 242
++A L +D GNYVVQ++L LG+ K + +I + L EEL++ + S++VEK
Sbjct: 1007 NNALDLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPNIEELAVQKFSSNVVEKCLIIGN 1066
Query: 243 ---RPSIFTPCQHK------------YGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQ 287
R I K +GN+VIQ+AL V ++T+ ++
Sbjct: 1067 NKCRKLIINEILKKDKDILKQIILDPFGNYVIQRALSVASEPELTK-----------LVE 1115
Query: 288 GIVPF 292
GI P+
Sbjct: 1116 GIKPY 1120
>gi|326496705|dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ I + K PF L+ H R++QKLI+ L I LV
Sbjct: 215 GNYLMQKLLAVCSEEQRMGIVLTLTKEPFVLVRISLNVHGTRAVQKLIESLKAREEIQLV 274
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
++A F +++ + V+ KCL++ N+ ++ AA + ++ GC L
Sbjct: 275 VAALRPGFLELIKDPNGNHVVQKCLQSFGADDNKPIFDAAAIYCLDIGMQCHGCCVLQRC 334
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I G + L+ I+ + L++D GNYVVQ+V+ L + + +GK+ LS
Sbjct: 335 IARSTGEHKEKLVAAIARNGFELAQDAYGNYVVQYVIELKVAAANASLAQQFEGKYIHLS 394
Query: 230 LLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK + P H Y N+V+ AL+ +KG
Sbjct: 395 MQKFSSNVVEKCLKVFKEADKANIILQLLAAPQFERLLLHPYANYVVYAALQNSKG 450
>gi|207345268|gb|EDZ72145.1| YGL014Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 349
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 19 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 78
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 79 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 136
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 137 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 196
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 197 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 256
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 257 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 309
>gi|169791859|pdb|3BWT|A Chain A, Crystal Structure Of The Rna Binding Domain Of Puf4 From
Saccharomyces Cerevisiae
Length = 333
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 5 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 64
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 65 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 122
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 123 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 182
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 183 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 242
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 243 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 295
>gi|186511600|ref|NP_192624.2| pumilio 11 [Arabidopsis thaliana]
gi|313471422|sp|Q9LDW3.2|PUM11_ARATH RecName: Full=Pumilio homolog 11; Short=APUM-11; Short=AtPUM11
gi|332657281|gb|AEE82681.1| pumilio 11 [Arabidopsis thaliana]
Length = 556
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+++ LG G+ +QK++ + +I + P L+ + R +QKLI+
Sbjct: 281 NVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIET 340
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+ ISLV SA F + + VI+ CL+ N+ + AA E+AT
Sbjct: 341 VTTKEQISLVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATT 400
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL--GLGDLKYSEKI 217
GC L ++ G + L+D IS ++ L++DP GNY+VQ+++ +G + +
Sbjct: 401 RHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV----NV 456
Query: 218 CSLLKGKFEELSLLRCGSHLVEK------YQRPSIFTP----------CQHKYGNFVIQQ 261
L+G + +L+ + GSH+VEK R I Q Y N+VIQ
Sbjct: 457 LFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQC 516
Query: 262 ALRVTKGF 269
AL TKGF
Sbjct: 517 ALSKTKGF 524
>gi|102140025|gb|ABF70156.1| pumilio/Puf RNA-binding domain-containing protein [Musa acuminata]
Length = 1129
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 48/270 (17%)
Query: 54 LQKMLSGKDSTITYKIFEAVYKYP-FDLMTDGYGC-------HLARSMQ----------- 94
Q+ L G++ IT K+ + +D+M D G H+A +Q
Sbjct: 802 FQEFLDGREPEITQKVLAGFLRCSVYDMMMDCRGSDFILKLLHVADDVQRRQMEDYVRKD 861
Query: 95 -----KLIKLLVGSPCISLVIS--------AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
K+ K GS C+ ++ A K +M K SV+ CLE L+ +
Sbjct: 862 HRMLLKVAKDSSGSECVKELVKILKFPVGKALKCHVKQLMTCKNGKSVVDCCLEHLNYEA 921
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYV 201
N+V AA++ F +LA+ GC++L + ++ P R LL ++ A LS GNYV
Sbjct: 922 NKVFIQAALDSFTDLASDKCGCLALVSCMDYSTNPHRNLLLKKTTAGALALSCHIYGNYV 981
Query: 202 VQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS---------------- 245
VQ L + +E IC+ L G ELS+ + GS++V++ S
Sbjct: 982 VQCALNMNVAWAAETICADLAGSLMELSVHKNGSYVVQRCLESSGRHHIIRGLDCLSQGD 1041
Query: 246 IFTPCQHKYGNFVIQQALRVTKGFQMTERN 275
+ QH Y N+V++ AL K ++ N
Sbjct: 1042 LEDMLQHYYANYVLKTALAFFKVKPLSPHN 1071
>gi|169791860|pdb|3BX2|A Chain A, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
gi|169791861|pdb|3BX2|B Chain B, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
Length = 335
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 5 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 64
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 65 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 122
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 123 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 182
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 183 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 242
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 243 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 295
>gi|336364324|gb|EGN92684.1| hypothetical protein SERLA73DRAFT_190697 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378294|gb|EGO19452.1| hypothetical protein SERLADRAFT_478869 [Serpula lacrymans var.
lacrymans S7.9]
Length = 597
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G +LQK L IF + + DLMTD +G +L + +
Sbjct: 127 EIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 186
Query: 94 -----------QKLIKL---LVGSPCISLVIS-AAYRRFKDMMFSKEASSVII------- 131
Q L+ + + G+ + +I + RR D+ ++ + S+I+
Sbjct: 187 EQRNVICESVAQDLVNISLNMHGTRAVQKMIDFLSTRRQTDVRYNTQIHSIIVALSLHVV 246
Query: 132 -------------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
KCL L + N+ +Y A + E+ATH GC L I+ +R
Sbjct: 247 VLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQR 306
Query: 179 GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++
Sbjct: 307 VQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVI 366
Query: 239 EK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
EK R + + YGN+ +Q AL + Q
Sbjct: 367 EKCIRVAEHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQ 415
>gi|358055198|dbj|GAA98967.1| hypothetical protein E5Q_05655 [Mixia osmundae IAM 14324]
Length = 852
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA--------- 90
D+ L K + G FLQ+ L + IF ++ + +LMTD +G +L+
Sbjct: 449 DMPALCKDQHGCRFLQRKLEEGNPEYRDMIFSEIFPHFAELMTDAFGNYLSQKLFEFATD 508
Query: 91 ------------------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QKL+ L + +I A ++ +
Sbjct: 509 EQRDALIDSISGELVSISLNMHGTRAVQKLLDFLTTRRQVQSLIMALNLNVVTLIKDLNS 568
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+ I+
Sbjct: 569 NHVIQKCLNHLPPEDNQFIYNAVATNCIEVATHRHGCCVLQRCIDHASESQRIQLVTEIT 628
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
++ L DP GNYVVQ+VL L D ++ E I G LS + S++VEK
Sbjct: 629 YNSLILVGDPFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSAQKFSSNVVEKCIRVAD 688
Query: 241 -----------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
R ++ + + N+V+Q AL + Q E
Sbjct: 689 AAGRKVLVNEFLNRNNLERMLRDSFANYVVQTALDWAEPAQKQE 732
>gi|430811325|emb|CCJ31248.1| unnamed protein product [Pneumocystis jirovecii]
Length = 995
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ L I +VI+A ++ + VI KCL L + ++
Sbjct: 2 HGTRAVQKMIEYLSTPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFD 61
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A ++ E+ATH GC L I+ ++ + I++HA L +DP GNYVVQ++L
Sbjct: 62 AICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEITNHALNLVQDPFGNYVVQYILD 121
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR----PS-----------IFTPCQH 252
LGD ++SE + G LS+ + S+++EK R P+ I + +
Sbjct: 122 LGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEELPKKIGSLIRD 181
Query: 253 KYGNFVIQQALRVTKGFQ 270
Y N+VIQ +L Q
Sbjct: 182 SYANYVIQTSLDYADSTQ 199
>gi|255715081|ref|XP_002553822.1| KLTH0E07876p [Lachancea thermotolerans]
gi|238935204|emb|CAR23385.1| KLTH0E07876p [Lachancea thermotolerans CBS 6340]
Length = 710
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 57/287 (19%)
Query: 38 DY--DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL------ 89
DY +I+ L K + G FLQ+ L I+ Y +LMTD +G +L
Sbjct: 386 DYIGNILSLCKDQHGCRFLQRQLDIGGCNAANSIYLETRDYVVELMTDSFGNYLIQKLLE 445
Query: 90 ---------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF 122
R++QKL++ + +V+ + ++
Sbjct: 446 RVTDDQRLELVRSSAQSFVYIALDPHGTRALQKLVECISTEEEAGIVVDSLRGSIVELSR 505
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ V+ KCL+ L + + ++ AA+ ++ATH GC L ++ + L
Sbjct: 506 DLNGNHVVQKCLQKLKPEDFQFIFDAAIESCVKIATHRHGCCVLQRCLDHGSKEQFQQLC 565
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
+ I +H + L+ DP GNYVVQ++L +Y+ +I ++LK K ELSL + GS++V
Sbjct: 566 EEIIAHVDELATDPFGNYVVQYILTKQTERSASEYTNRIVNILKPKIIELSLHKFGSNVV 625
Query: 239 EKYQRPSIFTP------------------CQHKYGNFVIQQALRVTK 267
EK R + + YGN+V+Q AL + +
Sbjct: 626 EKVLRTPVVSELMITELLNRSGDSKIDQLLHDGYGNYVLQTALDIAR 672
>gi|218186872|gb|EEC69299.1| hypothetical protein OsI_38363 [Oryza sativa Indica Group]
Length = 770
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I LL K + G FLQ++ + S K+F+ + ++ +L+ D +G +L
Sbjct: 452 IHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHD 511
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R +QK+I+ + +S+V+ A +M
Sbjct: 512 QKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETINSPDEVSMVVCALSSGAITLMMDA 571
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
V ++CL+ + L AM ++ ELA +GC + I ++ LL
Sbjct: 572 NGCHVALRCLQKFSHEHKAFLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYN 631
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
I+S A LS+ GNYVVQ++L L +++I L+G F LS+ + S++VEK
Sbjct: 632 ITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEGHFGSLSMQKSSSNVVEKCLKE 691
Query: 241 -------------YQRPSIFTPCQHKYGNFVIQQALR 264
P + YGN+VIQ AL+
Sbjct: 692 ASWPKRVKIIHELINDPKLLHILIDPYGNYVIQTALK 728
>gi|50552736|ref|XP_503778.1| YALI0E10395p [Yarrowia lipolytica]
gi|49649647|emb|CAG79369.1| YALI0E10395p [Yarrowia lipolytica CLIB122]
Length = 566
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 67/291 (23%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------CHL 89
DI L K + G +LQ+ L + + IFE + + +LMTD +G C +
Sbjct: 259 DIFALCKDQHGCRYLQRKLEEEPYYLNL-IFEQTHSHVVELMTDPFGNYLCQKLLENCSV 317
Query: 90 A-----------------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
A R++QK+I + I +++ A R ++
Sbjct: 318 AQTTVLIRTAAPSLVQVALNQHGTRALQKMIDYVTNDEQIEIIVQALERNVVRLIQDLNG 377
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL L+ +Y A + +ATH GC L ++ +R L+ +I+
Sbjct: 378 NHVIQKCLNRLNSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQREMLIGVIT 437
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR--- 243
HA L DP GNYV Q+VLG E++ G LS+ + S+++EK +
Sbjct: 438 KHALQLVCDPFGNYVTQYVLG-------EQVIRQFVGHVVALSMQKFSSNVIEKSLKVAS 490
Query: 244 -----------------PSIFTPCQHKYGNFVIQQALRVTKGF---QMTER 274
P + + C YGN+V+Q AL + Q+ +R
Sbjct: 491 YELRAVLIAEICASPLLPKLLSDC---YGNYVVQTALDTANQYTRAQLIDR 538
>gi|344300994|gb|EGW31306.1| hypothetical protein SPAPADRAFT_61876 [Spathaspora passalidarum
NRRL Y-27907]
Length = 465
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 34/246 (13%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L+ DI+ L K + G FLQ+ L + T IF+ +Y +LM D +G +L
Sbjct: 146 NAKLSDFVGDILNLCKDQHGCRFLQRQLELDEGAATI-IFQEIYFKIVELMIDPFGNYLI 204
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + + L+I A
Sbjct: 205 QKLFEHITVEQRIVLVKNASGEFMKISMDPHGTRALQKLIECISTAEESKLIIEALQPHI 264
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+ + V+ KCL+ L N+ ++ A + +ATH GC L ++ +
Sbjct: 265 VILSRDLNGNHVVQKCLQNLKTSDNQFIFDAVCANCLAIATHRHGCCVLQRCLDHGDPLQ 324
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L I+ +A L+ DP GNYVVQ+VL GD K E I + +K LSL + GS++
Sbjct: 325 RQQLSLKIAENATKLAIDPFGNYVVQYVLSHGDDKSIEIILNHIKSNTIALSLHKFGSNV 384
Query: 238 VEKYQR 243
+EK R
Sbjct: 385 IEKSLR 390
>gi|150863841|ref|XP_001382453.2| hypothetical protein PICST_66941 [Scheffersomyces stipitis CBS
6054]
gi|149385097|gb|ABN64424.2| RNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 794
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 64/301 (21%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLS---------GKDSTI------TYKIFEAVYK 75
NA L+ +I L K + G FLQ+ L DS++ IF +Y
Sbjct: 459 NAKLSDFTGEIFSLCKDQHGCRFLQRQLDLGREVAEGRNTDSSVLSNDIAATMIFNEIYL 518
Query: 76 YPFDLMTDGYGCHL---------------------------------ARSMQKLIKLLVG 102
+LMTD +G +L R++QKL++ +
Sbjct: 519 KIVELMTDPFGNYLIQKLFENVSVDQRIILVKNAAPEFIRIALDPHGTRALQKLVECIST 578
Query: 103 SPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRG 162
L+I + + + V+ KCL+ L ++N+ ++ A H E+ATH G
Sbjct: 579 EEESKLIIGSLSPHIVSLSRDLNGNHVVQKCLQKLKPEENQFIFETASLHCNEIATHRHG 638
Query: 163 CVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
C L ++ +R L ++ +A LS DP GNYVVQ+VL GD + I +K
Sbjct: 639 CCVLQRCLDHGNSDQRRQLSLKVAENATNLSLDPFGNYVVQYVLSRGDEGSIQIIMDHIK 698
Query: 223 GKFEELSLLRCGSHLVEKYQRPSIFTPC------QHK----------YGNFVIQQALRVT 266
LSL + GS+++EK R + T +H+ +GN+V+Q +L V
Sbjct: 699 SNIISLSLHKFGSNVIEKSLRINKLTNTLIDVLLKHQDRFSDMLNDAFGNYVLQTSLDVA 758
Query: 267 K 267
Sbjct: 759 N 759
>gi|242085540|ref|XP_002443195.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
gi|241943888|gb|EES17033.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
Length = 678
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + I + K P L+ H R +QK+I+ + S +S+V
Sbjct: 405 GNYLIQKLLEQCNDNQKMHILYEITKIPGQLVKVACNMHGTRVVQKVIETVSTSDEVSMV 464
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA +M S V +CL+ L + L AA + ELA +GC +
Sbjct: 465 VSALSHGAITLMMDANGSHVAHRCLQKLSPKCKAFLLNAATKYCVELAKDRQGCCIIQKC 524
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I ++ LL I+ A L++ GNYV+Q +L L +I L+G + LS
Sbjct: 525 IIHANKEQKNKLLYSITGRALNLAEHQYGNYVIQFILDLKVTWAMNEILDKLEGSYGYLS 584
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALR 264
+ +C S++VEK P + +YGN+VIQ A R
Sbjct: 585 MQKCSSNVVEKCLKEARGPKRAKIILELINDPKLQNILLDQYGNYVIQTAFR 636
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 111/261 (42%), Gaps = 32/261 (12%)
Query: 21 TSIGPGTYGKNALLAQPDYDIVL-----LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYK 75
+S+ P K+A L D V+ L K + G FLQ++ + K+F+ V +
Sbjct: 335 SSLDPEVAMKSAQLNYNSVDEVVGELYHLAKDQNGCRFLQRIFTEGSQEDAQKVFDGVIE 394
Query: 76 YPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV--ISAAYRRFKDMMFSKEASSVIIKC 133
+ +LM D +G +L +QKL++ + + ++ I+ + + + + V+ K
Sbjct: 395 HIDELMIDPFGNYL---IQKLLEQCNDNQKMHILYEITKIPGQLVKVACNMHGTRVVQKV 451
Query: 134 LETLDEQKNEVLYLAAMNHFR-ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL 192
+ET+ + ++A++H L G + + ++ + LL+ + + L
Sbjct: 452 IETVSTSDEVSMVVSALSHGAITLMMDANGSHVAHRCLQKLSPKCKAFLLNAATKYCVEL 511
Query: 193 SKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQH 252
+KD G ++Q + + + K+ + G+ L+ +H
Sbjct: 512 AKDRQGCCIIQKCIIHANKEQKNKLLYSITGRALNLA---------------------EH 550
Query: 253 KYGNFVIQQALRVTKGFQMTE 273
+YGN+VIQ L + + M E
Sbjct: 551 QYGNYVIQFILDLKVTWAMNE 571
>gi|169791866|pdb|3BX3|A Chain A, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
gi|169791867|pdb|3BX3|B Chain B, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
Length = 335
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 5 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 64
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 65 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGCRALQKLIECIKTDEEAQIVVDSL--RP 122
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 123 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCRVLQRCLDHGTT 182
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 183 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 242
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 243 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 295
>gi|255555215|ref|XP_002518644.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
gi|223542025|gb|EEF43569.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
Length = 644
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 126/311 (40%), Gaps = 56/311 (18%)
Query: 23 IGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMT 82
+ G +G + L Q + ++ + + G FLQK + T IF V + +DL+
Sbjct: 299 VQAGKHGNYSSLEQVRGRMAMVARDQDGCRFLQKKVEELIPEQTEMIFLEVKDHLYDLIV 358
Query: 83 DGYGCHL------------------------------------ARSMQKLIKLLVGSP-C 105
D + +L R+MQK+I+++ P
Sbjct: 359 DQFANYLVQKLFLACNGVQINQLLLSLVQNGERLKNICIHMHGTRAMQKIIEIINNYPEQ 418
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
+ ++SA + + VI +CL+ + + + L E+A GC
Sbjct: 419 KASLVSALGNITVYLAKNHNGHHVIQQCLKCFEVEYTQYLLAEIAQSCIEIARDKSGCCV 478
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L ++ G + + I+++A LS DP GNYVVQ+VL + I L+G+F
Sbjct: 479 LQKALDSSYGELKECFITTITANASVLSVDPYGNYVVQYVLQMHIPHAEATILEQLRGQF 538
Query: 226 EELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
LS+ + GS++VEK PSI QH +GN+V Q AL V
Sbjct: 539 VNLSMDKFGSNVVEKCLKECNEINAAGIVQELADSPSILRVLQHPFGNYVAQSALEVAPE 598
Query: 269 --FQMTERNII 277
+Q ER II
Sbjct: 599 DLYQYLERVII 609
>gi|297852022|ref|XP_002893892.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
gi|297339734|gb|EFH70151.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
Length = 555
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L D I + P +L+ + R +QK+IK +
Sbjct: 258 VVELSMDPFGNYIVQKLLDVSDEEQRTMIVSVLTLTPRELIKICLNTYGTRVVQKMIKTV 317
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
I+LV S F ++ S V+ CLE L + + AA + E+ATH
Sbjct: 318 KTKQQIALVKSGLKPGFLALVNDLNGSHVLQSCLEFLGPNDTKFVLEAATKYCAEIATHR 377
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L + GP+ L+ I ++ LS+DP GNYVVQ ++ +++ ++
Sbjct: 378 HGCRVLQCCLINTVGPQNDRLVAEILRNSHHLSQDPFGNYVVQCLI-------EQQVSAV 430
Query: 221 -----LKGKFEELSLLRCGSHLVEKYQR----------------PSIFTPCQHKYGNFVI 259
+ + EL+ + SH++EK R P+ Q YGN+VI
Sbjct: 431 NLLVQFRTHYAELATQKFSSHVIEKCLRKYPESRAEIVRELLSIPNFEQLLQDPYGNYVI 490
Query: 260 QQALRVTK 267
Q AL VTK
Sbjct: 491 QTALSVTK 498
>gi|402218782|gb|EJT98857.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 514
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 47/273 (17%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSP----- 104
G+ QK+L + I E+V DL+ H R++QK+I L +P
Sbjct: 85 GNYLCQKLLEFANDEQRNLICESV---ALDLVGISLNMHGTRAVQKMIDYL-STPRQARV 140
Query: 105 -CISL-----VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
C S+ +I A ++ + VI KCL L + N+ +Y A H E+AT
Sbjct: 141 SCSSILQIHAIIIALSMNVVTLIKDLNGNHVIQKCLNRLAPEDNQFIYNAVAAHCVEVAT 200
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
H GC L I+ +R L++ I+ +A L +DP GNYVVQ++L L D ++S+ +
Sbjct: 201 HRHGCCVLQRCIDHASEAQRMQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVI 260
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHK-------------------YGNFVI 259
G LS+ + S+++EK R + P K +GN+ +
Sbjct: 261 RQFVGNVIPLSMQKFSSNVIEKCIR--VAEPSTRKLLVEEFLSRAKLEKLLRDSFGNYCV 318
Query: 260 QQALRVTKGFQMTERNIIQELGQSSFIQGIVPF 292
Q AL Q + S ++GI P
Sbjct: 319 QTALDYADPAQ-----------RLSLVEGIRPI 340
>gi|390603815|gb|EIN13206.1| ARM repeat-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1019
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QK+L I E+V + DL+ H R++QK+I L I +
Sbjct: 616 GNYLCQKLLEYATDEQRNLICESVAQ---DLVNISLNMHGTRAVQKMIDFLSTRRQIHSI 672
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I A ++ + VI KCL L + N+ +Y A + E+ATH GC L
Sbjct: 673 IVALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRC 732
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I+ +R L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS
Sbjct: 733 IDHASDQQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFTGNVCALS 792
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQAL 263
+ + S+++EK R + + YGN+ +Q AL
Sbjct: 793 VQKFSSNVIEKCIRVAEHSTRKLLIEELLNRTRLEKLLRDSYGNYCVQTAL 843
>gi|403362771|gb|EJY81119.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1066
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA----------- 90
+L K +GG FLQ+ + + + KIF + DLM D +G +LA
Sbjct: 536 TVLAKDQGGCRFLQRKIEENNREVVDKIFRHTIENFMDLMNDPFGNYLAQKLTETVREDQ 595
Query: 91 ----------------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
RS+QK+I+ + I L+ + + +++ +
Sbjct: 596 LTEIIHKVQEDPVGLCRNSHGTRSIQKIIETVKSPAQIELLANYLKEKVQELAEDINGNH 655
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI K L T +N+ +Y A M E+A H GC + I+ ++ L I H
Sbjct: 656 VIQKILFTWKPAQNQFIYNAMMEKCVEIACHKHGCCVMQKCIDGATPQQKLELTLRIGDH 715
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
+ ++P GNYVVQ+VL L ++ +++I L G L + + S+++EK
Sbjct: 716 TQVFVRNPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIEKCLEHNATN 775
Query: 241 ---------YQRPSIFTPCQHKYGNFVIQQALRVT 266
Q S + +YGN+VIQ++L V
Sbjct: 776 VKEAMVREILQADSFYDFLLDQYGNYVIQKSLSVA 810
>gi|240276968|gb|EER40478.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 847
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
K + G +LQK L + IF + + +LMTD +G +L QKL++
Sbjct: 462 KDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNYLC---QKLLEFSNDEQR 518
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
+L+ +AA + K + ++ + + K +E + + + +Y A + TH GC
Sbjct: 519 TALINNAAPQLVK-IALNQHGTRALQKMIEFISTPE-QFIYDAVGESCVPVGTHRHGCCV 576
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L I+ G +R L++ I+++A L +DP GNYVVQ++L L + + E IC +G
Sbjct: 577 LQRCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNI 636
Query: 226 EELSLLRCGSHLVEK 240
LS + S+++EK
Sbjct: 637 PALSKQKFSSNVIEK 651
>gi|449550572|gb|EMD41536.1| hypothetical protein CERSUDRAFT_110088 [Ceriporiopsis subvermispora
B]
Length = 1043
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G +LQK L IF + + DLMTD +G +L + +
Sbjct: 581 EIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 640
Query: 94 -----------QKLIKL---LVGSPCISLVIS-AAYRRFKDMMFSKEASSVII------- 131
Q L+ + + G+ + +I + RR D ++ + S+I+
Sbjct: 641 EQRNVICESVAQDLVNISLNMHGTRAVQKMIDFLSTRRQADPKYNAQIHSIILALSLHVV 700
Query: 132 -------------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
KCL L + N+ +Y A + E+ATH GC L I+ +R
Sbjct: 701 VLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDAQR 760
Query: 179 GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++
Sbjct: 761 VQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVI 820
Query: 239 EK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
EK R + + YGN+ +Q AL + Q
Sbjct: 821 EKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYAEPSQ 869
>gi|330805438|ref|XP_003290689.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
gi|325079152|gb|EGC32766.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
Length = 926
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 52/285 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L + + G FLQK L D +T IF+ V Y +LMTD +G +L
Sbjct: 606 IYPLCRDQHGCRFLQKKLEESDPQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDQ 665
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QK+I+ L I L+ + ++ +
Sbjct: 666 QRLTIIEKVGTDIVRISMNMHGTRAVQKMIEYLTTPEQIELIKRSLKDSVVQLIQDLNGN 725
Query: 128 SVIIKCLETLDEQKNEVLY--LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
VI KCL L Q N+ +Y +++ + +ATH GC L I+ ++ L+ +
Sbjct: 726 HVIQKCLNKLSPQDNQFIYDSVSSDGNCVAVATHRHGCCVLQRCIDHASESQKLQLIQEV 785
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+++ L +DP GNYVVQ+VL L + ++ G L+ + S++VEK +
Sbjct: 786 IANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQKFSSNVVEKCLHVA 845
Query: 246 IFTP-----------------CQHKYGNFVIQQALRVTKGFQMTE 273
T Q Y N+VIQ +L +++ Q T+
Sbjct: 846 DATTRGNLIQEVIDYDNLLYLLQDPYANYVIQTSLSISEPHQHTK 890
>gi|340517824|gb|EGR48067.1| RNA binding protein [Trichoderma reesei QM6a]
Length = 661
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
D++ H R++QK+I+ + + L+I A R ++ + VI KCL L
Sbjct: 390 DMVRIALNQHGTRALQKMIETVSTPQQVHLIIEALRYRVVQLIQDLNGNHVIQKCLNKLT 449
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
+ ++ A E+ TH GC L I+ G ++ L+ I+ A L +DP G
Sbjct: 450 ASDAQFIFDAVGEKCVEVGTHRHGCCVLQRCIDHATGDQKLWLIQCITKDARILVQDPFG 509
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQRPS--------- 245
NYVVQ+++ L + ++E I + +G LS + S+++EK Q PS
Sbjct: 510 NYVVQYIIDLHEPTFTEPIVASFEGCISMLSRHKFSSNVIEKCLRCAQPPSKDMIVSELL 569
Query: 246 --IFTPCQHKYGNFVIQQAL 263
I Q + N+V+Q AL
Sbjct: 570 GDIEGCLQDSFANYVVQTAL 589
>gi|297845132|ref|XP_002890447.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
gi|297336289|gb|EFH66706.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
Length = 343
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDE 139
L+ D ++ QKL L + +L + RRF ++ K AS V + + ++
Sbjct: 98 LLDDRKKQERLQTQQKL--LGITDDVDTLFAATILRRFLHIITDKYASYVARRGIAVFNK 155
Query: 140 QKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSG 198
+K E +Y +++ +A GC++LN+ I + + L D+I+ A LS D G
Sbjct: 156 KKKEAIYERILHYALYIARDKHGCLALNDIITDADDLYYKNKLFDVIAHKAILLSNDAYG 215
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE---------------KYQR 243
N+V+Q VL L DL+ I + L+G F +LS+ R GS++V +
Sbjct: 216 NFVIQQVLKLNDLRCKNNIVASLRGHFVDLSIQRYGSYIVNLLLETEESMVVVVEELLEG 275
Query: 244 PSIFTPCQHKYGNFVIQQALRVTK 267
+ ++ YGNFV+ +ALRVT+
Sbjct: 276 DMLMRLTRNVYGNFVVCKALRVTQ 299
>gi|15220239|ref|NP_174820.1| protein pumilio 17 [Arabidopsis thaliana]
gi|12322098|gb|AAG51092.1|AC027032_12 RNA-binding protein, putative [Arabidopsis thaliana]
gi|332193710|gb|AEE31831.1| protein pumilio 17 [Arabidopsis thaliana]
Length = 304
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 112 AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFIN 171
A R F +M K AS V I+ + + K E++Y + + LA GC++LN I
Sbjct: 89 AIMRLFIHVMIDKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIK 148
Query: 172 EMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSL 230
E+ P R L+D++S++A LS D GN+VVQHVL L D + + I L G ELS
Sbjct: 149 ELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSF 208
Query: 231 LRCGSHLVEK 240
+ GS++VE+
Sbjct: 209 KKYGSYIVER 218
>gi|156095470|ref|XP_001613770.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148802644|gb|EDL44043.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 1542
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 72/341 (21%)
Query: 4 GGRRPDLNRGIGIANLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDS 63
GRR + G N + + P + N I + K + G LQ++L K+
Sbjct: 614 AGRRTHPQKKYGYPNRDSYLSPIEFSGN---------IFNIAKDQTGCRILQRILERKNP 664
Query: 64 TITYKIFEAVYKYPFDLMTDGYG---------------------------------CHLA 90
+I+ +LM D +G H
Sbjct: 665 RHVQEIYREALDNIVELMVDPFGNYLCQKLMEVCTSEQIERIIDAAADQLVSASVSVHGT 724
Query: 91 RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM 150
R++QKLI+++ I+ A ++ + V+ KCL +L + E +Y A +
Sbjct: 725 RTVQKLIEMIRTPAQIAKATRALQNSVITLIKDINGNHVVQKCLVSLTSHQCEFIYKAIL 784
Query: 151 NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD 210
N+ E++TH GC + I+ ++ + I+ H L +D GNYVVQ+VL LG
Sbjct: 785 NNCVEVSTHRHGCCVIQRCIDSANEQQKALFIRHITDHTLELVQDAFGNYVVQYVLNLGR 844
Query: 211 LKYSEKICSLLKGKFEELSLLRCGSHLVEK-------------------YQRPSIFTPCQ 251
K + I L EEL+ + S++VEK + S+
Sbjct: 845 EKVNLDIVHRLLPNLEELATQKFASNVVEKCLTIGSSRCRKILINDILRRGKDSMKKLIL 904
Query: 252 HKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIVPF 292
++GN+VIQ+AL V ++T+ ++GI P+
Sbjct: 905 DRFGNYVIQRALSVASEPELTK-----------LVEGIKPY 934
>gi|4261598|gb|AAD13898.1|S58126_1111111 Unknown [Saccharomyces cerevisiae]
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae]
Length = 888
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S +IFE Y +LMTD +G +L
Sbjct: 558 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADRIFEETKDYTVELMTDSFGNYLI 617
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 618 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 675
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 676 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 735
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 736 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 795
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 796 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 848
>gi|226287941|gb|EEH43454.1| pumilio domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 925
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 22/250 (8%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA 90
NA L ++ + K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 514 NAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLC 573
Query: 91 RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM 150
QKL++ +L+ +AA + K + ++ + + K +E + + + +Y A
Sbjct: 574 ---QKLLEYSNDEQRTALINNAAPQLVK-IALNQHGTRALQKMIEFISTPE-QFIYDAVG 628
Query: 151 NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD 210
+ TH GC L I+ G +R L++ I+ +A L +DP GNYVVQ++L L +
Sbjct: 629 ASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITKNAFTLVQDPFGNYVVQYILDLNE 688
Query: 211 LKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS-----------IFTPCQ------HK 253
+ E IC +G LS + S+++EK R + + P +
Sbjct: 689 RHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDS 748
Query: 254 YGNFVIQQAL 263
+ N+V+Q A+
Sbjct: 749 FANYVVQTAM 758
>gi|392579559|gb|EIW72686.1| hypothetical protein TREMEDRAFT_72846 [Tremella mesenterica DSM
1558]
Length = 913
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 53/277 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++++L K + G +LQ+ L D+ IF Y + +LMTD +G +L
Sbjct: 447 ELLMLCKDQHGCRYLQRKLEEGDAGHRDMIFLETYGHFPELMTDPFGNYLCQKLLEYSTD 506
Query: 90 -----------------------ARSMQKLIKLLVG---SPCISLVISAAYRRFKDMMFS 123
R++QK++ L + I +I A ++
Sbjct: 507 EQRSAIIDSVANDLVAISLNMHGTRAVQKMVDFLSAPRQAKQIRTLIYALSMNVVALIKD 566
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+
Sbjct: 567 LNGNHVIQKCLNKLCPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 626
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
I ++ +L +DP GNYV+Q++L L D ++SE + G LS+ + S++VEK
Sbjct: 627 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 686
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQAL 263
R + + YGN+VIQ L
Sbjct: 687 VADPEVRKSLVSEVLNRSRLEKLLRDSYGNYVIQTIL 723
>gi|399219033|emb|CCF75920.1| unnamed protein product [Babesia microti strain RI]
Length = 546
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 122/297 (41%), Gaps = 53/297 (17%)
Query: 28 YGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC 87
+ N LL + + + K + G LQK L + + I + V DLMTD +G
Sbjct: 192 FNLNTLLQSNNASLSDMAKDQSGCRLLQKSLDDIPAALEI-ILKEVLDNLVDLMTDPFGN 250
Query: 88 HL---------------------------------ARSMQKLIKLLVGSPCISLVISAAY 114
+L R++QKLI+++ +I+
Sbjct: 251 YLCQKLMVVCSEKQLSLLINALWNNLVQISLNMHGTRAVQKLIEIVKTRENTQYLITILE 310
Query: 115 RRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMR 174
D++ + VI KCL L + +Y A N+ ELATH GC + I+
Sbjct: 311 GGVLDLIKDLNGNHVIQKCLLCLPSTDCQFIYDAMENNCVELATHRHGCCVMQRCIDSAN 370
Query: 175 GPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCG 234
+R L++ I + L +D GNYVVQ+V+ L D + KI LL EL+ +
Sbjct: 371 LEQRASLVENIVDNTLVLVEDAFGNYVVQYVMKLKDETINCKILELLLPNLYELAKQKFS 430
Query: 235 SHLVEKY-------QRPSIFTPCQHK------------YGNFVIQQALRVTKGFQMT 272
S++VE+ R SI ++ YGN+VIQ+ L T+G ++
Sbjct: 431 SNVVERLLIYGPDEVRKSIVETLLNEPPEAFKMLILDPYGNYVIQRMLSFTRGEELN 487
>gi|224067236|ref|XP_002302423.1| predicted protein [Populus trichocarpa]
gi|222844149|gb|EEE81696.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 17/235 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK++ ++ + + F L+ H R++QKL+ + +SLV
Sbjct: 234 GNYVVQKLIEVISEEQRTRVLRMLTRTDFQLVRICLDVHGTRAVQKLLNCITNPLQVSLV 293
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+SA + ++ VI ++ Q N+ + E+AT+ GC L
Sbjct: 294 VSALNQGAVALIKDSNGHHVIQHSMKHFSPQDNKYILKQVAEKCFEIATNKSGCCVLQRC 353
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ G R L+ I ++A L++D GNYVVQH+L L + +E + + +G + LS
Sbjct: 354 VEYSEGEHRDRLVAEIIANALLLAEDHYGNYVVQHILDLKMPQITENLLTQFEGSYMALS 413
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTK 267
+ GS++VEK P +GNFVIQ+AL V++
Sbjct: 414 CNKYGSNVVEKCLLTTSEDQSTQIILELLSNPGASMLLVDPFGNFVIQKALSVSQ 468
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 52/285 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L + + G FLQK L D +T IF+ V Y +LMTD +G +L
Sbjct: 716 IYPLCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDR 775
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QK+I+ L I L+ + ++ +
Sbjct: 776 QRLTIIEKVGTDIVRISMNMHGTRAVQKMIEYLTTPEQIQLIKRSLKDSVVPLIQDLNGN 835
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFR--ELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
VI KCL L Q N+ +Y A + +ATH GC L I+ ++ L+ +
Sbjct: 836 HVIQKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCCVLQRCIDHASESQKLQLIQEV 895
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
+++ L +DP GNYVVQ+VL L + ++ G L+ + S++VEK
Sbjct: 896 IANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQKFSSNVVEKCLHVA 955
Query: 241 ------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
++ Q Y N+VIQ +L +++ Q T+
Sbjct: 956 DAITRGYLIQEVIDYDNLLHLLQDPYANYVIQTSLTISEPHQHTK 1000
>gi|403215598|emb|CCK70097.1| hypothetical protein KNAG_0D03510 [Kazachstania naganishii CBS
8797]
Length = 829
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 67/287 (23%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L K + G FLQK L IFE ++ +LMTD +G +L
Sbjct: 509 IYTLCKDQHGCRFLQKQLDIMGKEAADVIFEETKEHTVELMTDSFGNYLVQKLIERVTIE 568
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD--MMFSKE 125
R++QKLI+ + ++IS KD ++ SK+
Sbjct: 569 QRTELSMIASPHFVSIAKNPHGTRALQKLIECVSSPEEAQIIIST----LKDCVVVLSKD 624
Query: 126 --ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCLE L + ++ A +ATH GC L ++ + L +
Sbjct: 625 LNGNHVIQKCLERLQPPDFQFIFDATCKECSSIATHRHGCCVLQRCLDFGTKAQFQSLCN 684
Query: 184 LISSHAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
++ S+ + L+ DP GNYVVQ+++ D Y+ KI + LK K ELS+ + GS+++E
Sbjct: 685 VLLSNIDKLTLDPFGNYVVQYIVTKETERKDYDYTFKIANSLKAKMGELSVHKFGSNVIE 744
Query: 240 KYQRPSIFTPCQ--------------------HKYGNFVIQQALRVT 266
K R + C+ YGN+V+Q L V+
Sbjct: 745 KLLRTPVV--CEALIQELLNDDSGKEIELLLNDSYGNYVLQTTLDVS 789
>gi|58265692|ref|XP_570002.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109369|ref|XP_776799.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226234|gb|AAW42695.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 948
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 53/277 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+++ L K + G +LQK L D IF Y + +LMTD +G
Sbjct: 450 ELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTE 509
Query: 87 --------------------CHLARSMQKLIKLLVGS---PCISLVISAAYRRFKDMMFS 123
H R++QK++ L I +I A ++
Sbjct: 510 EQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKD 569
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+
Sbjct: 570 LNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 629
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
I ++ +L +DP GNYV+Q++L L D ++SE + G LS+ + S++VEK
Sbjct: 630 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 689
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQAL 263
R + + YGN+VIQ L
Sbjct: 690 VADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL 726
>gi|393218870|gb|EJD04358.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1018
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 46/269 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G +LQK L ++ IF + + +LMTD +G +L + +
Sbjct: 540 EIASLCKDQHGCRYLQKKLEEGNAEHRDMIFRETFGHFAELMTDPFGNYLCQKLLEYSTD 599
Query: 94 -----------QKLIKL---LVGSPCISLVIS-AAYRRFKDMMFSKEASSVII------- 131
Q L+ + + G+ + +I + +R D+ ++ + S+I+
Sbjct: 600 DQRNVICESVAQDLVNISLNMHGTRAVQKMIDFLSTQRQADLRYNAQIHSIIVALSLHVV 659
Query: 132 -------------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
KCL L + N+ +Y A + E+ATH GC L I+ +R
Sbjct: 660 VLIKDLNGNHVIQKCLNKLTPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQR 719
Query: 179 GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++
Sbjct: 720 IQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVI 779
Query: 239 EKYQRPSIFTPCQHKYGNFVIQQALRVTK 267
EK R + +H +I++ L T+
Sbjct: 780 EKCIRVA-----EHNTRKMLIEELLNRTR 803
>gi|115488610|ref|NP_001066792.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|108862690|gb|ABA98278.2| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649299|dbj|BAF29811.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|215697156|dbj|BAG91150.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617094|gb|EEE53226.1| hypothetical protein OsJ_36125 [Oryza sativa Japonica Group]
Length = 769
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I LL K + G FLQ++ + S K+F+ + ++ +L+ D +G +L
Sbjct: 451 IHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHD 510
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R +QK+I+ + +S+V+ A +M
Sbjct: 511 QKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETINSPDEVSMVVCALSSGAITLMMDA 570
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
V ++CL+ + L AM ++ ELA +GC + I ++ LL
Sbjct: 571 NGCHVALRCLQKFSHEHKAFLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYN 630
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
I+S A LS+ GNYVVQ++L L +++I L+ F LS+ + S++VEK
Sbjct: 631 ITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEDHFGSLSMQKSSSNVVEKCLKE 690
Query: 241 -------------YQRPSIFTPCQHKYGNFVIQQALR 264
P + YGN+VIQ AL+
Sbjct: 691 ASWPKRVKIIHELINDPKLLHILIDPYGNYVIQTALK 727
>gi|452822083|gb|EME29106.1| serine rich Pumilio family RNA binding domain protein [Galdieria
sulphuraria]
Length = 848
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R +Q++I+ + G IS V +A +M + VI +CL+ + N+ ++
Sbjct: 611 HGTRVVQRIIECMEGEDQISTVCTALTPFASQLMKDVNGNHVIQRCLQKVAPTHNQFIFD 670
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A ++H ELATH GC + ++ ++ + I +A L +D GNYVVQ+VL
Sbjct: 671 AVVSHCVELATHRHGCCVIQRCLDYAIPLQKEQVCMEICENAFTLVQDAFGNYVVQYVLD 730
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------------------YQRPSIFTP 249
L + Y KI + L G ELS+ + S++VEK R +
Sbjct: 731 LKNRFYIAKIIAQLAGHLYELSVQKFSSNVVEKCLQQVDPETRKHLIYELMSDRELLGRL 790
Query: 250 CQHKYGNFVIQQALRVTKGFQMTE 273
YGN+V+Q+AL++ + Q+ +
Sbjct: 791 LHDAYGNYVVQRALQLAQSPQLEQ 814
>gi|384502000|gb|EIE92491.1| hypothetical protein RO3G_17013 [Rhizopus delemar RA 99-880]
Length = 259
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ F QK+L D + V+ L H R++Q+LI+ + I V
Sbjct: 9 GNYFCQKLL---DKCTDEQRTRIVHITSPHLAQAALNIHGTRAVQRLIETISTPEQIDSV 65
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLD-EQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
I A ++ + + VI KCL L E+KN+ +Y A + E+A+H GC L
Sbjct: 66 IHALNPSVTALIKNLNGNHVIQKCLHYLSKEEKNQFIYDAICTNCVEVASHKHGCCVLQR 125
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ ++ L+ IS HA L + P GNYVVQ+VL LG + YSE I G L
Sbjct: 126 CFDYATFKQKDQLVKEISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKFLGHICSL 185
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 186 SSQKFSSNVIEK 197
>gi|6321424|ref|NP_011501.1| Puf4p [Saccharomyces cerevisiae S288c]
gi|1723801|sp|P25339.2|PUF4_YEAST RecName: Full=Pumilio homology domain family member 4
gi|1322473|emb|CAA96714.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812184|tpg|DAA08084.1| TPA: Puf4p [Saccharomyces cerevisiae S288c]
gi|392299246|gb|EIW10340.1| Puf4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 558 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 617
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 618 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 675
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 676 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 735
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 736 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 795
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 796 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 848
>gi|405119110|gb|AFR93883.1| pumilio-family RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 981
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 53/277 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+++ L K + G +LQK L D IF Y + +LMTD +G
Sbjct: 450 ELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTE 509
Query: 87 --------------------CHLARSMQKLIKLLVGS---PCISLVISAAYRRFKDMMFS 123
H R++QK++ L I +I A ++
Sbjct: 510 EQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKD 569
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+
Sbjct: 570 LNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 629
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
I ++ +L +DP GNYV+Q++L L D ++SE + G LS+ + S++VEK
Sbjct: 630 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 689
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQAL 263
R + + YGN+VIQ L
Sbjct: 690 VADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL 726
>gi|349578206|dbj|GAA23372.1| K7_Puf4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 889
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 559 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 618
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 619 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 676
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 677 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 736
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 737 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 796
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 797 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 849
>gi|321254126|ref|XP_003192973.1| RNA-binding protein of the pumilio family [Cryptococcus gattii
WM276]
gi|317459442|gb|ADV21186.1| RNA-binding protein of the pumilio family, putative [Cryptococcus
gattii WM276]
Length = 950
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 53/277 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+++ L K + G +LQK L D IF Y + +LMTD +G
Sbjct: 451 ELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTE 510
Query: 87 --------------------CHLARSMQKLIKLLVGS---PCISLVISAAYRRFKDMMFS 123
H R++QK++ L I +I A ++
Sbjct: 511 EQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKD 570
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+
Sbjct: 571 LNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 630
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
I ++ +L +DP GNYV+Q++L L D ++SE + G LS+ + S++VEK
Sbjct: 631 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 690
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQAL 263
R + + YGN+VIQ L
Sbjct: 691 VADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL 727
>gi|224056214|ref|XP_002298759.1| predicted protein [Populus trichocarpa]
gi|222846017|gb|EEE83564.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 53/268 (19%)
Query: 54 LQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL------------------------ 89
LQ +L + + IF V Y DLM D +G H+
Sbjct: 310 LQGVLDERKPDLIEMIFLEVKDYVHDLMEDQFGNHVIQKLFEVCSEAQMTQLILSLIHNQ 369
Query: 90 ------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETL 137
R+MQK+I+ + L+ RR + ++ VI KCLE
Sbjct: 370 RRLLGLCFHLVGTRAMQKMIEHIKTPKQRLLLTQVLIRRTVILSQNQNGYHVIQKCLEHF 429
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
+ L F ++A GC LN ++ +G + LL ++A LS+ P
Sbjct: 430 PFDDIKPLIKEIAESFLDIAMDKSGCCVLNRALDCAQGELKHLLLLETIANAMLLSESPY 489
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----------------- 240
GNYVVQHVL + I LKG F LS+ + GS++VEK
Sbjct: 490 GNYVVQHVLDERIQHATIGILEKLKGYFVSLSMNKFGSNVVEKCLIWSGEENASMIIEEF 549
Query: 241 YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
P C++ +GN+V+Q+AL V+KG
Sbjct: 550 MHSPYFVNICRNNFGNYVVQKALEVSKG 577
>gi|365765603|gb|EHN07110.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 568 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 627
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 628 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 685
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 686 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 745
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 746 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 805
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 806 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 858
>gi|323333456|gb|EGA74850.1| Puf4p [Saccharomyces cerevisiae AWRI796]
Length = 896
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 566 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 625
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 626 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 683
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 684 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 743
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 744 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 803
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 804 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 856
>gi|190406983|gb|EDV10250.1| protein PUF4 [Saccharomyces cerevisiae RM11-1a]
Length = 894
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 564 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 623
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 624 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 681
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 682 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 741
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 742 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 801
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 802 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 854
>gi|151943274|gb|EDN61587.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
gi|259146487|emb|CAY79744.1| Puf4p [Saccharomyces cerevisiae EC1118]
Length = 892
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 562 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 621
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 622 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 679
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 680 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 739
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 740 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 799
Query: 232 RCGSHLVEKYQRPSIFTP------------------CQHKYGNFVIQQALRVT 266
+ GS+++EK + +I + YGN+V+Q AL ++
Sbjct: 800 KFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 852
>gi|297739756|emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L +I A+ DL+T H RS+QK+I+ + +V
Sbjct: 445 GNYLVQKLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKSPEQFLMV 504
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+++ +++ V CL+ L E L+ A H ELAT GC L
Sbjct: 505 VASLKPGIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKC 564
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ G R LL I ++A LS+DP GNYVVQ+V L ++ + L+G + LS
Sbjct: 565 LGHSDGEHRLRLLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLS 624
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK P + Y N+VIQ AL +KG
Sbjct: 625 MQKYSSNVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHSKG 680
>gi|147861285|emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L +I A+ DL+T H RS+QK+I+ + +V
Sbjct: 546 GNYLVQKLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKSPEQFLMV 605
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+++ +++ V CL+ L E L+ A H ELAT GC L
Sbjct: 606 VASLKPGIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKC 665
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ G R LL I ++A LS+DP GNYVVQ+V L ++ + L+G + LS
Sbjct: 666 LGHSDGEHRLRLLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLS 725
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK P + Y N+VIQ AL +KG
Sbjct: 726 MQKYSSNVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHSKG 781
>gi|225441625|ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L +I A+ DL+T H RS+QK+I+ + +V
Sbjct: 546 GNYLVQKLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKSPEQFLMV 605
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+++ +++ V CL+ L E L+ A H ELAT GC L
Sbjct: 606 VASLKPGIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKC 665
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ G R LL I ++A LS+DP GNYVVQ+V L ++ + L+G + LS
Sbjct: 666 LGHSDGEHRLRLLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLS 725
Query: 230 LLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ + S++VEK P + Y N+VIQ AL +KG
Sbjct: 726 MQKYSSNVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHSKG 781
>gi|302698595|ref|XP_003038976.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
gi|300112673|gb|EFJ04074.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
Length = 480
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 59/290 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G +LQK L IF + + DLMTD +G +L + +
Sbjct: 36 EIPALCKDQHGCRYLQKKLEEGLPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTD 95
Query: 94 -----------QKLIKL---LVGSPCISLVIS-AAYRRFKDMMFSKE------------- 125
Q+L+ + + G+ + +I + RR D ++
Sbjct: 96 EQRNIICESVAQELVNISLNMHGTRAVQKMIDFLSTRRQTDGRYNNHQIHSIILALSMHV 155
Query: 126 --------ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +
Sbjct: 156 VVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQ 215
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
R L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S++
Sbjct: 216 RIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFAGNVCALSVQKFSSNV 275
Query: 238 VEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+EK R + + YGN+ +Q AL + Q
Sbjct: 276 IEKCIRVAEHNTRKMLIDELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQ 325
>gi|328866633|gb|EGG15016.1| hypothetical protein DFA_09838 [Dictyostelium fasciculatum]
Length = 1352
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 72/322 (22%)
Query: 15 GIANLSTSIGPGTYGKNALLAQPDY--------DIVLLGKTEGGSLFLQKMLSGKDSTIT 66
G ANL + GK ++A Y I L + + G FLQK L D +T
Sbjct: 1007 GTANLDIT------GKIEMIANKQYTSIDQISSSIYPLCRDQHGCRFLQKKLEEGDEPLT 1060
Query: 67 YKIFEAVYKYPFDLMTDGYGCHL---------------------------------ARSM 93
IF+ V +Y +LMTD +G +L R++
Sbjct: 1061 ELIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDRQRLVIIDKVGPDIVRISMNMHGTRAV 1120
Query: 94 QKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLY--LAAMN 151
QK+I+ L I+L+ + + ++ + VI KCL L N+ +Y +++
Sbjct: 1121 QKMIEFLTTPEQIALIKKSLAQHVVPLIQDLNGNHVIQKCLNKLAPPDNQFIYDSVSSSA 1180
Query: 152 HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDL 211
+ +ATH GC L I+ ++ L+ + +++ L +DP GNYVVQ+VL DL
Sbjct: 1181 NCIAVATHRHGCCVLQRCIDHASETQKVQLIQEVIANSLVLVQDPFGNYVVQYVL---DL 1237
Query: 212 KYSEKICSLLK---GKFEELSLLRCGSHLVEK---YQRP--------------SIFTPCQ 251
+ C + K G L+ + S++VEK P ++ Q
Sbjct: 1238 PFPGLTCEMAKRFVGHVSILATQKFSSNVVEKCLHVADPITRGNLIQELIDCDTLLHLLQ 1297
Query: 252 HKYGNFVIQQALRVTKGFQMTE 273
+ N+VIQ +L + + Q T+
Sbjct: 1298 DPFANYVIQTSLTIAEPHQHTK 1319
>gi|367002536|ref|XP_003686002.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
gi|357524302|emb|CCE63568.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
Length = 794
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 55/281 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L K + G FLQK L IFE + + +LMTD +G +L
Sbjct: 475 IYSLCKDQHGCRFLQKQLDLVGEQAANTIFEEIKNHCIELMTDSFGNYLIQKLLERITLE 534
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QKL++ + +++ + ++ +
Sbjct: 535 QRLIIINISAPYFIDIALNPHGTRALQKLVECIKTDEEAKIIVDSLKPSIVELSKDLNGN 594
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ K L+ + + ++ AA + E+ATH GC L ++ + L + +
Sbjct: 595 HVVQKILQQFKPEFIQFIFEAACQNCIEIATHRHGCCVLQRCLDSGTTTQCESLCEQLLI 654
Query: 188 HAEFLSKDPSGNYVVQHVLG----LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ + LS +P GNYV+Q+V+ G+ YS K ++LK K ++LSL + GS++VEK R
Sbjct: 655 NIDRLSFNPFGNYVIQYVITKEVETGNYNYSYKYINILKHKIKDLSLHKFGSNVVEKLLR 714
Query: 244 PSIFTPC------------------QHKYGNFVIQQALRVT 266
+ + YGN+V+Q AL VT
Sbjct: 715 TPVLSETIILELLKKGGKNEIEILLNDSYGNYVLQTALDVT 755
>gi|444318131|ref|XP_004179723.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
gi|387512764|emb|CCH60204.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
Length = 870
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 59/274 (21%)
Query: 50 GSLFLQKMLS--GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-------QKLIKLL 100
G FLQK L GK++ IF + +LMTD +G +L + + Q++I
Sbjct: 559 GCRFLQKQLDVLGKEAADI--IFNETKDHTVELMTDSFGNYLIQKLLERITLEQRIIIAN 616
Query: 101 VGSPCISLVI-----SAAYRRFKDMMFSKEASSVII---------------------KCL 134
+ SP + + A ++ + + E S++I+ KCL
Sbjct: 617 ISSPHFVEIALNPHGTRALQKLVECTETDEESNIIVKSLTPSILMLSKDLNGNHVVQKCL 676
Query: 135 ETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSK 194
+ + + + ++ AA F E+ATH GC L ++ +R L + + + + L+
Sbjct: 677 QKMPPKHFQFIFDAACKDFIEIATHRHGCCVLQRCLDHGTEEQRHSLCNKLLENIDMLTM 736
Query: 195 DPSGNYVVQHVLG--LGDLKY--SEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPC 250
DP GNYVVQ+V+ D KY + KI LLK K LSL + GS++VEK R I +
Sbjct: 737 DPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVIVLSLHKFGSNVVEKLLRTPIVSET 796
Query: 251 ------------------QHKYGNFVIQQALRVT 266
YGN+V+Q AL ++
Sbjct: 797 VILELLNKESNQEIQTLLNDSYGNYVLQTALAIS 830
>gi|403224139|dbj|BAM42269.1| RNA-binding protein Puf1 [Theileria orientalis strain Shintoku]
Length = 700
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 59/288 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++V + + + G LQ+ L D + V + LMTD +G +L
Sbjct: 223 NVVSIAQDQTGCRMLQRQLECNDHQFIASVLNEVLDNLYMLMTDPFGNYLCQKLMSVCDS 282
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QKLI++ V I+ + S D++
Sbjct: 283 DQLGKIITSCEPQFISICLNMHGTRAIQKLIEV-VTEENITRITSILSTGVVDLVNDLNG 341
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KCL +L + + +Y A + LATH GC + I+ +R L+D IS
Sbjct: 342 NHVIQKCLVSLSSEHCDFIYKAMNENCVYLATHRHGCCVMQRCIDAASPAQRAKLIDTIS 401
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
S L +D GNYV+Q+VL L D + +I + L + + + S++VE R I
Sbjct: 402 SKTLELVEDAYGNYVIQYVLRLKDDAINSRIVAFLCEDVTKFAKQKFSSNVVE---RCLI 458
Query: 247 FTPCQHK----------------------YGNFVIQQALRVTKGFQMT 272
F P + + +GN+VIQ+ L V + ++T
Sbjct: 459 FCPLEVRSTLISKFLNVPFDVLKDLILDPFGNYVIQRVLNVAQPDELT 506
>gi|395326054|gb|EJF58468.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 978
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 116/288 (40%), Gaps = 57/288 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I L K + G +LQK L IF + + DLMTD +G
Sbjct: 528 EIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTD 587
Query: 87 --------------------CHLARSMQKLIKLL-------VGSPCISLVISAAYRRFKD 119
H R++QK+I L +G I +I A
Sbjct: 588 EQRNVICESVAQDLVNISLNMHGTRAVQKMIDFLSTRRQTDLGDVQIHSIILALSLHVVV 647
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
++ + VI KCL L + N+ +Y A + E+ATH GC L I+ +R
Sbjct: 648 LIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRV 707
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++E
Sbjct: 708 QLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFAGNVCALSVQKFSSNVIE 767
Query: 240 K-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
K R + + YGN+ +Q AL + Q
Sbjct: 768 KCIRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYAEPSQ 815
>gi|392571884|gb|EIW65056.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 992
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G +LQK L IF + + DLMTD +G +L + +
Sbjct: 535 EIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 594
Query: 94 -----------QKLIKL---LVGSPCISLVIS-AAYRRFKDMMFSKEASSVII------- 131
Q L+ + + G+ + +I + RR D+ + + S+I+
Sbjct: 595 EQRNVICESVAQDLVNISLNMHGTRAVQKMIDFLSTRRQTDLRCNGQIHSIILALSLHVV 654
Query: 132 -------------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
KCL L + N+ +Y A + E+ATH GC L I+ +R
Sbjct: 655 VLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQR 714
Query: 179 GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++
Sbjct: 715 VQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVI 774
Query: 239 EK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
EK R + + YGN+ +Q AL + Q
Sbjct: 775 EKCVRVAEHNTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQ 823
>gi|7267527|emb|CAB78009.1| putative protein [Arabidopsis thaliana]
gi|7321073|emb|CAB82120.1| putative protein [Arabidopsis thaliana]
Length = 524
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+++ LG G+ +QK++ + +I + P L+ + R +QKLI+
Sbjct: 281 NVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIET 340
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+ ISLV SA F + + VI+ CL+ N+ + AA E+AT
Sbjct: 341 VTTKEQISLVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATT 400
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL--GLGDLKYSEKI 217
GC L ++ G + L+D IS ++ L++DP GNY+VQ+++ +G + +
Sbjct: 401 RHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV----NV 456
Query: 218 CSLLKGKFEELSLLRCGSHLVEK------YQRPSIFTP----------CQHKYGNFVIQQ 261
L+G + +L+ + GSH+VEK R I Q Y N+VIQ
Sbjct: 457 LFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQC 516
Query: 262 ALRVTK 267
AL TK
Sbjct: 517 ALSKTK 522
>gi|403414617|emb|CCM01317.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 120/299 (40%), Gaps = 75/299 (25%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I L K + G +LQK L IF + + DLMTD +G
Sbjct: 590 EIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 649
Query: 87 --------------------CHLARSMQKLIKLLVGSPCISLVISA----AYRRFK-DMM 121
H R++QK+I L SLV + AYR + D+
Sbjct: 650 DQRNVICESVAQDLVNISLNMHGTRAVQKMIDFLSTRRQASLVPARFHYIAYRDGQTDLK 709
Query: 122 FSKEASSVII--------------------KCLETLDEQKNEVLYLAAMNHFRELATHVR 161
++ + S+I+ KCL L + N+ +Y A + E+ATH
Sbjct: 710 YNAQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 769
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL 221
GC L ++ +R L++ I+ +A L +DP GNYVVQ++L L D ++S+ +
Sbjct: 770 GCCVLQRCVDHASDIQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 829
Query: 222 KGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQAL 263
G LS+ + S+++EK R + + YGN+ +Q AL
Sbjct: 830 TGNVCALSVQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 888
>gi|68073265|ref|XP_678547.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56499050|emb|CAH95801.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 851
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 132/306 (43%), Gaps = 65/306 (21%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
++ + K + LQK+L K+ + +I+ ++ +LM D +G +L
Sbjct: 462 NVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTP 521
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QKLI+++ I + ++ ++
Sbjct: 522 EQIEKIIDKSSDELINASISVHGTRTVQKLIEMIKTPSQIRKITNSLKNSIIILIKDING 581
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL TL + +Y + +F E++TH GC + I+ ++ L++ IS
Sbjct: 582 NHVVQKCLGTLSSIQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLINKIS 641
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
S++ L +D GNYVVQ++L +G+ K + +I L E+ ++ + S+++EK
Sbjct: 642 SNSLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEKCLIIGT 701
Query: 247 FTPCQ--------------------HKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFI 286
T C+ KYGN+VIQ+AL V ++T+ +
Sbjct: 702 -TKCRKIMINGLLKKGKNVLKNVILDKYGNYVIQRALSVAPEPELTK-----------LV 749
Query: 287 QGIVPF 292
+GI P+
Sbjct: 750 EGIKPY 755
>gi|365760688|gb|EHN02392.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 891
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 57/292 (19%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA 90
+A+L Q +I L K + G FLQK L S IFE +Y +LMTD +G +L
Sbjct: 561 DAVLDQYIGNIHSLCKDQHGCRFLQKQLDVLGSKAADAIFEETKEYTVELMTDSFGNYLI 620
Query: 91 RSM-------QKLIKLLVGSP--------------------CI-----SLVISAAYRRFK 118
+ + Q+++ + SP CI + ++ + R +
Sbjct: 621 QKLLEAVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTYEEAQIVVDSLRPYT 680
Query: 119 DMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP 176
+ SK+ + VI KCL+ L + + ++ A ++ ++ATH GC L ++
Sbjct: 681 -VQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDHGTRE 739
Query: 177 RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLLR 232
+ L + + + + L+ DP GNYVVQ+++ + Y+ KI LLK + ELS+ +
Sbjct: 740 QCETLCNKLLTLVDKLTLDPFGNYVVQYIITKESERKKYDYTHKIVHLLKPRAIELSIHK 799
Query: 233 CGSHLVEK-YQRPSIFTPC-----------------QHKYGNFVIQQALRVT 266
GS+++EK + P + P YGN+V+Q AL ++
Sbjct: 800 FGSNVIEKILKTPIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 851
>gi|281204898|gb|EFA79092.1| Conserved hypothetical protein [Polysphondylium pallidum PN500]
Length = 1346
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 52/285 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I L + + G FLQK L D +T IF+ V +Y +LMTD +G +L
Sbjct: 1029 IYPLCRDQHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDR 1088
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QK+I+ L I+L+ + ++ +
Sbjct: 1089 QRLMIIDKVGPDIVRISMNMHGTRAVQKMIEFLTTPEQIALIKKSLANYVVPLIQDLNGN 1148
Query: 128 SVIIKCLETLDEQKNEVLY--LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
VI KCL L N+ +Y +++ + +ATH GC L I+ ++ L++ +
Sbjct: 1149 HVIQKCLNKLSPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASESQKFQLINEV 1208
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
S++ L +DP GNYVVQ+VL L + ++ G L+ + S++VEK
Sbjct: 1209 ISNSLVLVQDPFGNYVVQYVLDLPFPGLATEMAKRFLGNVPILATQKFSSNVVEKCLHVA 1268
Query: 241 --YQRPSIFTPC----------QHKYGNFVIQQALRVTKGFQMTE 273
R ++ Q + N+VIQ +L + + Q T+
Sbjct: 1269 DPMTRGNLIQEIIDCDILHNLLQDPFANYVIQTSLTIAEPHQHTK 1313
>gi|224136880|ref|XP_002326968.1| predicted protein [Populus trichocarpa]
gi|222835283|gb|EEE73718.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 132/334 (39%), Gaps = 72/334 (21%)
Query: 6 RRPDLNRGIGIANLST---SIGPGTYGKN--ALLAQP----DY--------DIVLLGKTE 48
+ PD N G+ + SI G KN +L+ +P DY +V L K
Sbjct: 138 QNPDFNDRRGLVQRESNYRSINNGLVSKNQNSLIRRPLRLQDYLSWEDLSGKVVALAKDP 197
Query: 49 GGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG---------------------- 86
G FLQK++ +F V Y L+ D +G
Sbjct: 198 YGCKFLQKLIESATREQIDMLFYEVIGYVGGLIVDPFGNYVVQKLVEVLSEEQRTGILRM 257
Query: 87 --------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIK 132
H R +QKL+ + +S+V+SA + ++ VI
Sbjct: 258 LTRTDFQLVRICLDVHGTRVVQKLLNCITNPQQVSIVVSALSQGAVALITDSNGHHVIQH 317
Query: 133 CLETLDEQKNE-VLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
+ + N+ +L A N F +AT+ GC L + G R LL I ++A
Sbjct: 318 FFKHFSTEDNKYILKQVAENCF-GIATNKSGCCVLQRCVEYSEGEARDRLLAEIIANALL 376
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----------- 240
L++D GNYVVQH+L L + +E + + KG + LS + GS++VE
Sbjct: 377 LAEDHYGNYVVQHILKLKSPEITENLLAQFKGSYMALSCNKYGSNVVESCLLTTREEQST 436
Query: 241 ------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ P + +GNFVIQ+AL +++G
Sbjct: 437 QIILELLRNPLVSMLLVDPFGNFVIQKALSISQG 470
>gi|82539941|ref|XP_724322.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yoelii yoelii]
Length = 923
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 54/287 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
++ + K + LQK+L K+ + +I+ ++ +LM D +G
Sbjct: 637 NVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTP 696
Query: 87 --------------------CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
H R++QKLI+++ I + ++ ++
Sbjct: 697 EQIEKIIDKSSDELINASISVHGTRTVQKLIEMIKTPSQIRKITNSLKNSIIILIKDING 756
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL TL + +Y + +F E++TH GC + I+ ++ L++ IS
Sbjct: 757 NHVVQKCLVTLSSTQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLINKIS 816
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSI 246
S+ L +D GNYVVQ++L +G+ K + +I L E+ ++ + S+++EK
Sbjct: 817 SNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEKCLIIGT 876
Query: 247 FTPCQH--------------------KYGNFVIQQALRVTKGFQMTE 273
T C+ KYGN+VIQ+AL V ++T+
Sbjct: 877 -TKCRKMMINGLLKKGKNILKNVILDKYGNYVIQRALSVAPEPELTK 922
>gi|164658049|ref|XP_001730150.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
gi|159104045|gb|EDP42936.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
Length = 447
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK I + +I A R ++ + VI KCL L N+ +Y
Sbjct: 2 HGTRAVQKTIDFISTPAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLPAGDNQFIYD 61
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A ++ATH GC L I+ +R L++ I+ ++ L +DP GNYVVQ+VL
Sbjct: 62 AVAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEITMYSLTLVQDPFGNYVVQYVLD 121
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHK-------------- 253
L D +E + + G +LS + S+++EK R P +HK
Sbjct: 122 LNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIR-VAEPPLRHKLVAELVDPSRLELL 180
Query: 254 ----YGNFVIQQALRVTKGFQMTE 273
+ N+V+Q L + Q T
Sbjct: 181 LRDSFANYVVQTCLDYAEPAQRTH 204
>gi|213408907|ref|XP_002175224.1| PUF4 [Schizosaccharomyces japonicus yFS275]
gi|212003271|gb|EEB08931.1| PUF4 [Schizosaccharomyces japonicus yFS275]
Length = 846
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISA 112
FLQK L +F VY + +LMTD + +I+ L + ISL+ A
Sbjct: 582 FLQKKLDENPRNNVAIVFPEVYAHINELMTDPF---------DIIEKLTSNEQISLLTLA 632
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+ + VI KCL +K + ++ A + E+ATH GC L ++
Sbjct: 633 LSPHVAKLSCDLNGNHVIQKCLHKFSSEKLQFIFTAMEENIVEIATHRHGCCVLQRSLDR 692
Query: 173 MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLR 232
+ L + ++A L +DP GNYVVQ+V L + +Y++ + + G +LS+ +
Sbjct: 693 AGEENKRRLAFKVIANALALVQDPFGNYVVQYVFDLRNDEYNDMLVTQFSGHICDLSMQK 752
Query: 233 CGSHLVEKYQRPSIFTPCQH-----------------KYGNFVIQQALRVTKGFQMTER 274
S+ +EK R S C+ Y N+VIQ L G +M +R
Sbjct: 753 FSSNAIEKCIRVSTPESCERMLEEVLQSSRMEKLLKDSYANYVIQSFLTHVTG-EMQQR 810
>gi|15220219|ref|NP_174813.1| protein pumilio 10 [Arabidopsis thaliana]
gi|313471421|sp|Q9LP21.2|PUM10_ARATH RecName: Full=Putative pumilio homolog 10; Short=APUM-10;
Short=AtPUM10
gi|332193706|gb|AEE31827.1| protein pumilio 10 [Arabidopsis thaliana]
Length = 528
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L D I + P +L+ + R +QK+IK +
Sbjct: 254 VVELSMDPLGNYIVQKLLVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTV 313
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
I+LV SA F ++ V+ CLE L N+ + AA + +LATH
Sbjct: 314 KTKQQIALVKSALEPGFLVLVNDSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQ 373
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE-KICS 219
GC L + G + L+ IS + LS+DP GNYVVQ ++ D + S +
Sbjct: 374 YGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLI---DQQVSSVNLLL 430
Query: 220 LLKGKFEELSLLRCGSHLVEKYQR----------------PSIFTPCQHKYGNFVIQQAL 263
+ EL+ + SH++EK R P+ Q Y N+VIQ AL
Sbjct: 431 PFRTHCIELATQKFSSHVIEKCLRKYPESRAEIVRELLSYPNFEQLLQDPYANYVIQTAL 490
Query: 264 RVTKG 268
VTKG
Sbjct: 491 SVTKG 495
>gi|406606752|emb|CCH41788.1| hypothetical protein BN7_1327 [Wickerhamomyces ciferrii]
Length = 743
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 50/292 (17%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA LA +I L K + G FLQK L + T IF+ ++++ +LM D +G +L
Sbjct: 389 NARLADFQGEIYSLCKDQHGCRFLQKQLDLNTGSSTI-IFDEIHQHVIELMIDPFGNYLI 447
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKL++ + +++ +
Sbjct: 448 QKLLEKVNDEQRITLVENASSQFVSIALDPHGTRALQKLVECINTQKEAEIIVESLSSDV 507
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+ + VI KCL+ L ++ ++ AA + ++ATH GC L ++ +
Sbjct: 508 VSLSRDLNGNHVIQKCLQRLTPADSQFIFDAASENCSKIATHRHGCCVLQRCLDHGSKEQ 567
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
L +IS A LS D GNYVVQ+VL + + KI +K + +LSL + GS++
Sbjct: 568 CEQLSLVISKSAVDLSLDAFGNYVVQYVLAKDEKEAIAKIIDSVKTEIVKLSLHKFGSNV 627
Query: 238 VEKYQRPSIFTP----------------CQHKYGNFVIQQALRVTKGFQMTE 273
+EK R S + +GN+V+Q +L V K Q +
Sbjct: 628 IEKCLRVSTLSKQLIDEILKSGDELVKLLNDPFGNYVLQTSLDVAKEEQFEQ 679
>gi|448114573|ref|XP_004202611.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359383479|emb|CCE79395.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 87 CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLY 146
H R++QKL++ + ++I + + + V+ KCL+ L +N+ ++
Sbjct: 594 THGTRALQKLVECITTEEEGRIIIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIF 653
Query: 147 LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL 206
A + E+ATH GC L ++ +R L ++ +A LS DP GNYVVQ+VL
Sbjct: 654 DTASMYCNEIATHRHGCCVLQRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVL 713
Query: 207 GLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP----------------C 250
GD I +K LSL + GS+++EK R T
Sbjct: 714 SRGDEHSISLIMDHIKNNIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELL 773
Query: 251 QHKYGNFVIQQALRVTK 267
+GN+V+Q +L V
Sbjct: 774 NDAFGNYVLQTSLDVAN 790
>gi|389742126|gb|EIM83313.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1029
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------ 93
+I L K + G +LQK L IF + + DLMTD +G +L + +
Sbjct: 572 EIPSLCKDQHGCRYLQKKLEEGVPDHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTD 631
Query: 94 --QKLIKLLVGSPCISLVISA-------------AYRRFKDMMFSKEASSVII------- 131
+ +I V + +++ ++ + RR D + + S+I+
Sbjct: 632 EQRNIICESVATDLVNISLNMHGTRAVQKMIDFLSTRRQTDHRYHGQIHSIIVALSLHVV 691
Query: 132 -------------KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
KCL L + N+ +Y A + E+ATH GC L I+ +R
Sbjct: 692 VLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQR 751
Query: 179 GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLV 238
L++ I+ +A L +DP GNYVVQ++L L D ++S+ + G LS+ + S+++
Sbjct: 752 IQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVI 811
Query: 239 EK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
EK R + + YGN+ +Q AL + Q
Sbjct: 812 EKCIRVAEHGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQ 860
>gi|448112001|ref|XP_004201984.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359464973|emb|CCE88678.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 825
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 87 CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLY 146
H R++QKL++ + ++I + + + V+ KCL+ L +N+ ++
Sbjct: 595 THGTRALQKLVECITTEEEGRIIIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIF 654
Query: 147 LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL 206
A + E+ATH GC L ++ +R L ++ +A LS DP GNYVVQ+VL
Sbjct: 655 DTASMYCNEIATHRHGCCVLQRCLDHGNAEQRKQLSLRVAENATNLSLDPFGNYVVQYVL 714
Query: 207 GLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP----------------C 250
GD I +K LSL + GS+++EK R T
Sbjct: 715 SRGDEHSIGLIMDHIKNNIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELL 774
Query: 251 QHKYGNFVIQQALRVT 266
+GN+V+Q +L V
Sbjct: 775 NDAFGNYVLQTSLDVA 790
>gi|323304919|gb|EGA58676.1| Puf4p [Saccharomyces cerevisiae FostersB]
Length = 705
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
+A+L Q I L K + G FLQK L S IFE Y +LMTD +G +L
Sbjct: 442 DAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLI 501
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKLI+ + +V+ + R
Sbjct: 502 QKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSL--RP 559
Query: 118 KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ SK+ + VI KCL+ L + + ++ A + ++ATH GC L ++
Sbjct: 560 YTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTT 619
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK----YSEKICSLLKGKFEELSLL 231
+ L D + + + L+ DP GNYVVQ+++ K Y+ KI LLK + ELS+
Sbjct: 620 EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH 679
Query: 232 RCGSHLVEK 240
+ GS+++EK
Sbjct: 680 KFGSNVIEK 688
>gi|297806995|ref|XP_002871381.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
gi|297317218|gb|EFH47640.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 46/229 (20%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCIS-LVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
L T+ YG Q L L SP + L+ A F +M K A +II + +D
Sbjct: 148 LATNQYGS------QSLHILFRRSPSLDHLLFHAVGINFFLLMTDKYARGLIISAIRAVD 201
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
+ K EVLY + +LA RG R + + ++ +AE+L+ DP G
Sbjct: 202 KTKKEVLYKLTYEYTLQLA----------------RGKYRDLIFECVAKNAEWLAFDPYG 245
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-----YQRPSIFTPCQ-- 251
+VVQ+ L L + + I L+G F L++ R GS++VEK + R + +
Sbjct: 246 THVVQNFLTLQNPVATTAIAERLRGNFFSLAMERQGSYVVEKCLKSDFARGKVLEEFRGN 305
Query: 252 ---------HKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIVP 291
K+GNFV+Q ALRV K +M R +++E F++ + P
Sbjct: 306 DKEWVRMTTDKFGNFVVQCALRVMKEKEM--RPMLRE-----FVEKLRP 347
>gi|406699075|gb|EKD02294.1| RNA-binding protein of the pumilio family [Trichosporon asahii var.
asahii CBS 8904]
Length = 943
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 108/273 (39%), Gaps = 49/273 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I+ L K + G +LQK L D IF Y + +LM D +G
Sbjct: 433 EILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATE 492
Query: 87 --------------------CHLARSMQKLIKLLVGS---PCISLVISAAYRRFKDMMFS 123
H R++QK++ L I +I A ++
Sbjct: 493 EQRSAIIDSVSNDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALIKD 552
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+
Sbjct: 553 LNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQLVT 612
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE--------KICSLLKGKFEELSLLRCGS 235
I ++ +L +DP GNYV+Q++L L D ++SE +CSL E +
Sbjct: 613 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLFSSNVVEKCIRVADP 672
Query: 236 HL-----VEKYQRPSIFTPCQHKYGNFVIQQAL 263
+ E R + + YGN+VIQ L
Sbjct: 673 EIRKVLVAEVLNRSRLEKLLRDSYGNYVIQTIL 705
>gi|401889099|gb|EJT53039.1| hypothetical protein A1Q1_00046 [Trichosporon asahii var. asahii
CBS 2479]
Length = 943
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 108/273 (39%), Gaps = 49/273 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG------------- 86
+I+ L K + G +LQK L D IF Y + +LM D +G
Sbjct: 433 EILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATE 492
Query: 87 --------------------CHLARSMQKLIKLLVGS---PCISLVISAAYRRFKDMMFS 123
H R++QK++ L I +I A ++
Sbjct: 493 EQRSAIIDSVSNDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALIKD 552
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ VI KCL L + N+ +Y A + E+ATH GC L I+ +R L+
Sbjct: 553 LNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQLVT 612
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE--------KICSLLKGKFEELSLLRCGS 235
I ++ +L +DP GNYV+Q++L L D ++SE +CSL E +
Sbjct: 613 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLFSSNVVEKCIRVADP 672
Query: 236 HL-----VEKYQRPSIFTPCQHKYGNFVIQQAL 263
+ E R + + YGN+VIQ L
Sbjct: 673 EIRKVLVAEVLNRSRLEKLLRDSYGNYVIQTIL 705
>gi|225678938|gb|EEH17222.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1070
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/303 (22%), Positives = 117/303 (38%), Gaps = 70/303 (23%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L ++ + K + G +LQK L ++ IF + + +LMTD +G +L
Sbjct: 601 NAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLC 660
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QK+I+ + VI A R
Sbjct: 661 QKLLEYSNDEQRTALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVIKALRGRV 720
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+++ + VI KCL L + +Y A + TH GC L I+ G +
Sbjct: 721 VELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQ 780
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHV--------------------LGLGDLKYSEKI 217
R L++ I+ +A L +DP GNYVVQ++ + L + + E I
Sbjct: 781 RARLIEQITKNAFTLVQDPFGNYVVQYICKEHQPPQMIWTNFANNDDAVDLNERHFIEPI 840
Query: 218 CSLLKGKFEELSLLRCGSHLVEKYQRPS-----------IFTPCQ------HKYGNFVIQ 260
C +G LS + S+++EK R + + P + + N+V+Q
Sbjct: 841 CRSFRGNIPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQ 900
Query: 261 QAL 263
A+
Sbjct: 901 TAM 903
>gi|349916591|dbj|GAA27968.1| pumilio homolog 1 [Clonorchis sinensis]
Length = 1618
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKL---- 96
IV + + GS F+Q+ L + +F + + + LM D +G ++ + +L
Sbjct: 1029 IVEFAQDQYGSRFIQQKLEQASAVDKTAVFREILPHAYSLMVDVFGNYVIQKFFELGTPE 1088
Query: 97 IKLLVGSPCISLVISAAYRRFKDMMFSKEASS---------------------------- 128
K ++G V++ + + + + K S
Sbjct: 1089 QKQILGQRIRGQVLTLSLQMYGCRVIQKAVESVPLDMQVAIIRELDGCVIKCVKDQNGNH 1148
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E++ + + + + N+ + ++TH GC + + + +L + H
Sbjct: 1149 VVQKCIESVPPEHLQFIVDSFTNNVQSISTHSYGCRVIQRILEHCTPEQTAPILAELHQH 1208
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L KD GNYV+QHVL G + +I L+KG+ ELS+ + S++VEK
Sbjct: 1209 TESLVKDQYGNYVIQHVLEHGKTEDKSRIVDLIKGRVAELSVHKFASNVVEK 1260
>gi|413956754|gb|AFW89403.1| hypothetical protein ZEAMMB73_540172 [Zea mays]
Length = 676
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPF-DLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ Q+++ D +I + +YP L+ H R +QKLI+ + I L
Sbjct: 405 GNYLAQEIVEVCDEGQMLRIILVLTQYPLKQLIAVSLNTHGTRVVQKLIEKVSSREQIML 464
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+ISA F ++ VI +CL + N+ ++ A + +A H GC L +
Sbjct: 465 IISALQPSFMLLVNDHNGHHVIQRCLVNFGVEDNKFIFEGAAANCLNMAVHCHGCFVLQS 524
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
I + RG L+ I H L++DP GNYVVQ VL + + SL +GK+ L
Sbjct: 525 CI-KARGRYLANLIMEICLHGFELAQDPFGNYVVQCVLEQEIPSANAHLASLFEGKYVYL 583
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 584 SKQQGSSNVVEK 595
>gi|145483393|ref|XP_001427719.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394802|emb|CAK60321.1| unnamed protein product [Paramecium tetraurelia]
Length = 469
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 24 GPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD 83
G K + Q + + K G+ +QK+ +++ + FDL +
Sbjct: 174 GNDINAKRVIFNQVEKICLKASKDMFGNYTVQKIFEVGTQDQKQRMYNLLINQIFDLSKN 233
Query: 84 GYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNE 143
Y C + + M + IK + + + + Y + ++ + VI+ C E + KN+
Sbjct: 234 QYACRVVQKMMEFIK--DHTQLVDIFLQIMYPQINQLLNDSNGNYVILSCFELFN--KNQ 289
Query: 144 VLYLAAM--NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYV 201
++++ + + ++ GC + + + +LD++ + A L GNY+
Sbjct: 290 LIFMIPYIEDSLQFMSKQTYGCRVIQKVLELYPIEQTQRILDILMTLASQLCYQEFGNYI 349
Query: 202 VQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY 241
+Q++L G K + ICS++K FE+LS+ + GS+ VEKY
Sbjct: 350 IQYLLKSGPPKEKQIICSIIKDNFEQLSINKFGSNTVEKY 389
>gi|448516169|ref|XP_003867508.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis Co 90-125]
gi|380351847|emb|CCG22071.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis]
Length = 822
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 35/272 (12%)
Query: 38 DYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI 97
D DIV L G+ +QK++ + + E + K H R++QKLI
Sbjct: 532 DDDIVNLMLDSFGNYLIQKLV---ECITDEQRLELIKKSRSQFNRIALDSHGTRALQKLI 588
Query: 98 KLL-------------VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
+ + + L+I + + + V+ KCL +L + N+V
Sbjct: 589 ECVGKTKDEADVKGDELQDESARLIIESLAPTIVSLSKDLNGNHVVQKCLISLSNETNQV 648
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+Y ++ +A H GC L ++ + L I++ + + DP GNYVVQ+
Sbjct: 649 IYDTIKDNCEVVACHRHGCCVLQRCLDYGNNQQIDALSHEITTKLDIFTADPYGNYVVQY 708
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR-------------------PS 245
VL GD + + I + L+ F +LS+ + GS+++EK R
Sbjct: 709 VLTHGDRQSIDTIFAYLQSNFYQLSIHKFGSNVLEKSLRLNNTKQSSILIDELLKLSSDQ 768
Query: 246 IFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
YGN+V+Q L V + QMT+ N +
Sbjct: 769 FLKVLNDSYGNYVLQTCLDVAQLDQMTKLNEV 800
>gi|357443885|ref|XP_003592220.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355481268|gb|AES62471.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 416
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 83 DGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKN 142
D G + ++M K IKL + ++V+ +R ++ S VI++CL+ +
Sbjct: 177 DNRGTRVMQNMLKNIKLSFTT--YNVVVCTMHRITLALVKSFNGGYVILQCLKFFQSEHK 234
Query: 143 EVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVV 202
V+ + ++ T GC + ++ + G + L+ I S+A L++DP GNYV+
Sbjct: 235 RVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVKSLLVTEIISNAMILAEDPYGNYVL 294
Query: 203 QHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS-----------IFTPC- 250
Q V+ + EK+ L+GKF S+ + S++VE R S I C
Sbjct: 295 QFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVEDLLRFSNENDVAVIVEEIMKSCD 354
Query: 251 -----QHKYGNFVIQQALRVTKG 268
Q +GN+V Q+AL+ TKG
Sbjct: 355 FLNVVQDPFGNYVAQRALKCTKG 377
>gi|254570018|ref|XP_002492119.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|238031916|emb|CAY69839.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|328351394|emb|CCA37793.1| Pumilio homolog 2 [Komagataella pastoris CBS 7435]
Length = 720
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 57/284 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+I L K + G FLQK L IF Y +LM+D +G +L
Sbjct: 357 EIYSLCKDQHGCRFLQKQLDIGGKNAATMIFNETYLSVIELMSDPFGNYLIQKLLDKVSV 416
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QKL++ + ++I A +
Sbjct: 417 DQRITLVKNASSKFVRIALDPHGTRALQKLVECIDTEEESEIIIDALSSHVVSLSRDLNG 476
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KCL+ L + + ++ A +H E+ATH GC L ++ + L +S
Sbjct: 477 NHVVQKCLQKLSSKDCQFIFDATCDHCVEIATHRHGCCVLQRCLDHGSKEQCYALSLEVS 536
Query: 187 SHAEFLSKDPSGNYVVQHVL-------GLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
+ LS DP GNYVVQ+VL + D K I + +K LSL + GS+++E
Sbjct: 537 RNCIPLSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAIKDSIITLSLHKFGSNVIE 596
Query: 240 K-----------------YQRPSIFTPCQHKYGNFVIQQALRVT 266
K I YGN+V+Q AL V+
Sbjct: 597 KCLKIPRVSKLVIDQLLETHATKISELLNDPYGNYVLQTALDVS 640
>gi|296809045|ref|XP_002844861.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
gi|238844344|gb|EEQ34006.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
Length = 1069
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI+A + +++ + VI KCL L + +Y
Sbjct: 708 HGTRALQKMIEFISTPEQIQTVINALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 767
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH--- 204
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q+
Sbjct: 768 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYICT 827
Query: 205 --------------VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIF 247
++ LG+ ++ +C+ +G LS + S+++EK R S F
Sbjct: 828 FASLLLSYIIILTGIVDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDF 884
>gi|254571113|ref|XP_002492666.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
gi|238032464|emb|CAY70487.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
Length = 588
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+IV L K + G FLQ+ L + IF + + +LM D +G +L
Sbjct: 218 EIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQKLLNYCTN 277
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L + SLV + +++
Sbjct: 278 HEKDLLLEQSAPDLFSVALNQHGTRALQKIIDCLGTNYQFSLVRDSLKNHVVELIQDLNG 337
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+ + + + A H ++TH GC L +N+ + L D I
Sbjct: 338 NHVVQKCINKFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQQQLVQLGDEII 397
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS- 245
++A L KD GNYVVQ++L + +L +EK+ + LS+ + S+++EK + +
Sbjct: 398 ANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSSNVMEKCLKNAP 457
Query: 246 -----------IFTP------CQHKYGNFVIQQALRV 265
I P + +YGN+V+Q A+ V
Sbjct: 458 NRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDV 494
>gi|328353330|emb|CCA39728.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 600
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
+IV L K + G FLQ+ L + IF + + +LM D +G +L
Sbjct: 230 EIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQKLLNYCTN 289
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R++QK+I L + SLV + +++
Sbjct: 290 HEKDLLLEQSAPDLFSVALNQHGTRALQKIIDCLGTNYQFSLVRDSLKNHVVELIQDLNG 349
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+ + + + A H ++TH GC L +N+ + L D I
Sbjct: 350 NHVVQKCINKFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQQQLVQLGDEII 409
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS- 245
++A L KD GNYVVQ++L + +L +EK+ + LS+ + S+++EK + +
Sbjct: 410 ANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSSNVMEKCLKNAP 469
Query: 246 -----------IFTP------CQHKYGNFVIQQALRV 265
I P + +YGN+V+Q A+ V
Sbjct: 470 NRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDV 506
>gi|218185985|gb|EEC68412.1| hypothetical protein OsI_36587 [Oryza sativa Indica Group]
Length = 1013
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 144 VLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQ 203
+L +AA+ R LA GC + I ++ LL I+S A LS+D GNYV+Q
Sbjct: 723 LLDVAALRFLR-LAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALGLSEDQYGNYVIQ 781
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-----------------YQRPSI 246
V+ LG + KI LKG F LS+ +CGSH+VE P +
Sbjct: 782 FVVNLGIEWATSKIVKELKGNFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADPKL 841
Query: 247 FTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIVP 291
+GNFVIQ AL+ KG EL SSF++ I P
Sbjct: 842 PHIMADPFGNFVIQTALKECKG----------EL-HSSFVEAIRP 875
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 112/284 (39%), Gaps = 45/284 (15%)
Query: 36 QPDYDIVL---------LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG 86
+P +D +L L K + G +QK + + Y + + L D YG
Sbjct: 717 RPAWDFLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALGLSEDQYG 776
Query: 87 CHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLY 146
++ +Q ++ L + S ++ F + K S V+ CL+ E E++
Sbjct: 777 NYV---IQFVVNLGI-EWATSKIVKELKGNFGYLSMQKCGSHVVENCLKQASELDREMII 832
Query: 147 --LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
L A + G + + E +G ++ I HA L D NYV+Q
Sbjct: 833 HELMADPKLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQNDV--NYVIQF 890
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-----------------YQRPSIF 247
V+ LG + KI LKG F LS+ +CGSH+VE P +
Sbjct: 891 VVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADPKLP 950
Query: 248 TPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIVP 291
+GNFVIQ AL+ KG EL SSF++ I P
Sbjct: 951 HIMADPFGNFVIQTALKECKG----------EL-HSSFVEAIRP 983
>gi|19115035|ref|NP_594123.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|2842704|sp|Q92359.1|YDHE_SCHPO RecName: Full=Pumilio domain-containing protein C6G9.14
gi|1644326|emb|CAB03616.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 681
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 38 DYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------- 89
+ +I+ K + G +LQ++L K+ + +F + Y LM D +G +L
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 90 -------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
R++QK+I L+ IS +++A R ++ +K
Sbjct: 405 SEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNAL--RPNVVLLTK 462
Query: 125 E--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ + VI KCL ++ + ++ A +++TH GC + + + L+
Sbjct: 463 DLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLV 522
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ I HA L +D GNYV+Q+VL L + ++E I S K LS + S+++EK
Sbjct: 523 EHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEK 580
>gi|213405357|ref|XP_002173450.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001497|gb|EEB07157.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 532
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
I+ L + G LQ++L D + KIF Y++ +LM D +G +L
Sbjct: 217 ILALCHDQLGCRSLQRVLESNDPLVIDKIFRTTYEFIPNLMVDAFGNYLCQKLFEHANDF 276
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R++QK+++L+ I V+ + ++ +
Sbjct: 277 QRTAFVKVISSKLVPISLNMHGTRALQKVLELVSLPEQIDCVVKSLQNNVVLLIKDLNGN 336
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI KCL + ++ +Y A + E++TH GC + + +R L+ I
Sbjct: 337 HVIQKCLNQFSSEDSQFIYSAICRNIVEVSTHRHGCCVVQRCFDHASPAQREMLVLHIIP 396
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
A L +D GNYVVQ+VL L + Y++ + K LS+ + S+++EK
Sbjct: 397 VALELVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKVRMLSVQKFSSNVMEK 449
>gi|145521081|ref|XP_001446396.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413873|emb|CAK78999.1| unnamed protein product [Paramecium tetraurelia]
Length = 491
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 24/254 (9%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL 89
K + Q + D V K G+ +QK+ D YK++ + + +L + Y C +
Sbjct: 202 KQIIFCQIEKDCVKASKDMFGNYTVQKIFDVADYEQKYKLYSLLICHFLELSKNQYACRV 261
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
M + +K I +I Y ++ + V+++C E LD K+ + ++
Sbjct: 262 VSKMIQFVK--DSHELIESLIKTLYPLINQLLNDVNGNYVLLQCFEILD--KSTLFFIIP 317
Query: 150 M--NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
+ L+ GC + + +LDL+ S + L GNY++Q +L
Sbjct: 318 LIEESIATLSKSTYGCRLIQKVLELYPLEITQRILDLLISFSYQLCNQEFGNYIIQFLLK 377
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR---PS--IFTPCQ----------- 251
G K +IC +K FE+LS + GS+ VEKY PS I C+
Sbjct: 378 CGPQKEKSQICQTIKENFEQLSCNKFGSNTVEKYLDLLGPSQIIKNLCKISNDQFVFYNL 437
Query: 252 --HKYGNFVIQQAL 263
H +GN+V+++ L
Sbjct: 438 SIHPFGNYVMKKVL 451
>gi|19113974|ref|NP_593062.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|1351595|sp|Q09829.1|YAD3_SCHPO RecName: Full=Pumilio domain-containing protein C4G8.03c
gi|1022348|emb|CAA91204.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 780
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
D+ ++ YG RSMQ +I L + ISL++ + + V+ KC+
Sbjct: 541 DICSNLYG---TRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFP 597
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
+K E L+L+ + LAT+ GC L ++ G + L++ I L ++ G
Sbjct: 598 PEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYG 657
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR--------------- 243
NY+VQHVL L Y+E+I G +LSL + S+ +E+ R
Sbjct: 658 NYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFL 717
Query: 244 --PSIFTPCQHKYGNFVIQQALRVTKGFQ 270
P+I Y N+V+Q+ L V Q
Sbjct: 718 SFPNIEQLLDDCYANYVMQRFLNVADESQ 746
>gi|357489397|ref|XP_003614986.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516321|gb|AES97944.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 349
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 68 KIFEAVYKYPFDLMT---DGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
KI + ++P L+ D YG + +QKLI I+LV + F ++
Sbjct: 56 KIVRKLTQHPDQLVEASLDSYG---TKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDL 112
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ + V+ +CL + NE +Y AA +AT GC L I G + L+
Sbjct: 113 DGNQVLQRCLSCWSVEDNEFIYDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKE 172
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLL--------RCGSH 236
I +A L++ GN++VQ+++ + + ++ + GK+ +LS+ +C H
Sbjct: 173 ICKYAFHLAQHEYGNHIVQYIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEH 232
Query: 237 LVEKYQR--------PSIFTPCQHKYGNFVIQQALRVTKG 268
+VE R P Q Y N+V+Q AL+ T+G
Sbjct: 233 IVETRARIVQEFLAVPYFENLLQDPYANYVVQCALKFTEG 272
>gi|401406880|ref|XP_003882889.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
gi|325117305|emb|CBZ52857.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
Length = 1537
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISA--AYRRFKDMMFSKE--ASSVIIKCLETLDEQKNE 143
H R++QKLI++ G P S + A R ++ +K+ A+ V+ K L + + E
Sbjct: 1173 HGTRAVQKLIEVCAGLPINSTATNELLAALRPSIVLLAKDVNANHVVQKILSSFPAARCE 1232
Query: 144 VLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQ 203
++ H E++T GC + I+ + +L I+++A L +D GNYVVQ
Sbjct: 1233 FVFAQVKKHCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIAANALELMQDAFGNYVVQ 1292
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQH----------- 252
+VL L ++ + L+G ELS+ + S++VEK + TP Q
Sbjct: 1293 YVLDLQIDGFNGAVTGALRGHIRELSMQKFSSNVVEKCLM--LGTPEQRSLIVDELLADG 1350
Query: 253 ---------KYGNFVIQQALRVT 266
Y N+VIQ+AL V+
Sbjct: 1351 EGLKDMLLDSYANYVIQRALTVS 1373
Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 25/232 (10%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA 90
N LLA IVLL K + +QK+LS + +F V K+ ++ T+ +GC +
Sbjct: 1196 NELLAALRPSIVLLAKDVNANHVVQKILSSFPAARCEFVFAQVKKHCVEISTERHGCCV- 1254
Query: 91 RSMQKLIKLLVGSP--CISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLA 148
MQ+ I +P S ++ ++M + V+ L+ + N + A
Sbjct: 1255 --MQRCID---AAPPRAKSEILQEIAANALELMQDAFGNYVVQYVLDLQIDGFNGAVTGA 1309
Query: 149 AMNHFRELATH------VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSK---DPSGN 199
H REL+ V C+ L +R ++D + + E L D N
Sbjct: 1310 LRGHIRELSMQKFSSNVVEKCLMLGT------PEQRSLIVDELLADGEGLKDMLLDSYAN 1363
Query: 200 YVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR--PSIFTP 249
YV+Q L + +++ +++ +L + GS + K + PSI P
Sbjct: 1364 YVIQRALTVSSPAAQQQLLLVIQPCLSQLRQTQPGSRVAHKLVKKFPSILAP 1415
>gi|403332189|gb|EJY65091.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
gi|403345849|gb|EJY72304.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
Length = 1648
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 51/276 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------CHL 89
+++ L + GS FLQ++L + I + + + + +M D YG C
Sbjct: 1013 NVIKLSINQTGSKFLQRLLDNANPQIVQFLLDEIQSHLPMVMVDNYGNYFCQELLINCSS 1072
Query: 90 ARSMQKLIKLLV----------GSPCISLVISAAYRRFKDMMFSK-------------EA 126
A+ MQ L ++ V G+ I I ++ F + +
Sbjct: 1073 AQRMQILERISVDFVAICCNKKGTHTIQKFIDLVNLEAEEKFFQRVLAGHVALLSSDVQG 1132
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLI 185
+ VI ++ +E K + ++ F ELAT G + I++ P R L+ +
Sbjct: 1133 THVIQNIIKCFEESKRQFVFDEIYEQFIELATDYSGLSVIKTIISKTHKPENRKRLMGKL 1192
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQ 242
++A L+++P GNY +Q D + + I GK +LSL +C S++++K
Sbjct: 1193 VANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLSLQKCSSNVIDKCIQNS 1252
Query: 243 RPSIFT-------PCQ-------HKYGNFVIQQALR 264
+P C+ + YGNFV+Q AL+
Sbjct: 1253 KPEYLAIIMQELINCERLNNLITNSYGNFVVQNALK 1288
>gi|300175939|emb|CBK21935.2| unnamed protein product [Blastocystis hominis]
Length = 544
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 104/272 (38%), Gaps = 54/272 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG----------C--- 87
+V + K G LQ++L +IFE + +LMTD +G C
Sbjct: 224 VVDMAKNYNGCRALQQILLTASPAAVTEIFEELQSSLRELMTDPFGNYVFQMLLQVCSEE 283
Query: 88 --------------------HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
H R +Q L++ I + +A + +
Sbjct: 284 RRAQILSAVRDFVIDASLNIHGTRCVQSLVQYCSSPSMIDSLFAALQGHIAHLAAHPNGN 343
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR--RGGLLDLI 185
VI++CL+++ E L+ + H ++ATH GC + F +R P R L++ I
Sbjct: 344 HVILRCLQSIPESFCTPLFEELVQHCIDIATHRHGCCVIQQFF--LRAPPLYRNRLMNAI 401
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
A L +P GNYVVQ VL G + E + + G E S + S+++EK
Sbjct: 402 LHEAHLLITNPFGNYVVQFVLERGRPEERELLTRSVFGHVVEYSCQKYSSNVIEKVIVLA 461
Query: 241 -----YQ-------RPSIFTPCQHKYGNFVIQ 260
YQ P H + N++IQ
Sbjct: 462 DEQVRYQIICEIVGSPHFPAILHHNFANYIIQ 493
>gi|145529612|ref|XP_001450589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418211|emb|CAK83192.1| unnamed protein product [Paramecium tetraurelia]
Length = 479
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 41/298 (13%)
Query: 24 GPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD 83
G + K + Q + V K G+ +QK+ D +K++ + + +L +
Sbjct: 184 GNDSNQKRLIFCQVEKICVKAAKDMFGNYTVQKLFDVADCDQKFKLYSLLISHILELSKN 243
Query: 84 GYGCHLARSMQKLIKLLVGSP-CISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKN 142
Y C R +QK+I+ + GSP I Y ++ + V++ C E LD K+
Sbjct: 244 QYAC---RVVQKMIEFVKGSPEHIESFFKTLYPHIHQLLNDVNGNYVLLSCFEILD--KS 298
Query: 143 EVLYLAAMNHFRE----LATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
+L++ + + E L+ GC + + +LD++ S A L G
Sbjct: 299 TLLFI--IPYIEECIAILSKQTYGCRLIQKVLELYPLEITQRILDILISFAYQLCYQEFG 356
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQ------- 251
NY++Q++L G K I ++K FE+LS+ + GS+ VEKY + P Q
Sbjct: 357 NYIIQYLLKSGPQKERLIISQIIKENFEKLSINKFGSNTVEKY--IDLMGPSQIIKNLCT 414
Query: 252 -------------HKYGNFVIQQAL-------RVTKGFQMTERNIIQELGQSSFIQGI 289
H +GN+VI++ L K ++IQ++ S F Q +
Sbjct: 415 KSNDQFVFYNLSIHPFGNYVIKKVLISADPSVHYLKQLLKQHPDLIQQIKNSEFGQRV 472
>gi|119182519|ref|XP_001242388.1| hypothetical protein CIMG_06284 [Coccidioides immitis RS]
Length = 1208
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 21/245 (8%)
Query: 18 NLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYP 77
N T G + N L Q ++ L K + G +LQ+ L + IF + +
Sbjct: 792 NGETEAGAFSRFANVPLEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHV 851
Query: 78 FDLMTDGYGCHLARSMQKLIKL--------LVGSPCISLVISA-------AYRRFKDMMF 122
+LMTD +G +L QKL++ L+ + LV A A ++ + +
Sbjct: 852 VELMTDPFGNYLC---QKLLEFSNDEQRTALINNAAPQLVSIALNQHGTRALQKMIEFIS 908
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ E + +IK L D+ + V L NH + + I+ G +R L+
Sbjct: 909 TPEQTQTVIKALR--DKVVDLVQDLNG-NHVIQKCLNRLSAADAQRCIDHASGDQRAQLI 965
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQ 242
I++ + L +DP GNYVVQ++L L + +++E +C GK LS + S+++EK
Sbjct: 966 AQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCL 1025
Query: 243 RPSIF 247
R + F
Sbjct: 1026 RTADF 1030
>gi|256090645|ref|XP_002581294.1| pumilio [Schistosoma mansoni]
gi|353230661|emb|CCD77078.1| putative pumilio [Schistosoma mansoni]
Length = 1537
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +F + + ++LM D +G ++ +QK +L
Sbjct: 972 IVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYV---IQKFFEL- 1027
Query: 101 VGSP---------------CISL------VISAAYRRFK-DMMFS--------------- 123
G+P +SL VI A +M S
Sbjct: 1028 -GTPEQKQILAQRIRGQVLSLSLQMYGCRVIQKAVESVPLEMQISIVKELDGCVIKCVKD 1086
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + + + + A +H ++TH GC + + + +L
Sbjct: 1087 QNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRILEHCTPEQTTPILS 1146
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H + L KD GNYV+QHVL G + +I +KG+ +LS+ + S++VEK
Sbjct: 1147 ELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFASNVVEK 1203
>gi|256090643|ref|XP_002581293.1| pumilio [Schistosoma mansoni]
gi|353230662|emb|CCD77079.1| putative pumilio [Schistosoma mansoni]
Length = 1534
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +F + + ++LM D +G ++ +QK +L
Sbjct: 969 IVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYV---IQKFFEL- 1024
Query: 101 VGSP---------------CISL------VISAAYRRFK-DMMFS--------------- 123
G+P +SL VI A +M S
Sbjct: 1025 -GTPEQKQILAQRIRGQVLSLSLQMYGCRVIQKAVESVPLEMQISIVKELDGCVIKCVKD 1083
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + + + + A +H ++TH GC + + + +L
Sbjct: 1084 QNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRILEHCTPEQTTPILS 1143
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H + L KD GNYV+QHVL G + +I +KG+ +LS+ + S++VEK
Sbjct: 1144 ELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFASNVVEK 1200
>gi|158828185|gb|ABW81064.1| AlMpt5-2 [Arabidopsis lyrata subsp. lyrata]
Length = 949
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V + GS F+Q+ L + ++E + LMTD +G ++ + +++ L
Sbjct: 641 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKAIEVVDLD 700
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+ + R +D + + V+ KC+E + E+ E + + L+TH
Sbjct: 701 QKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHP 756
Query: 161 RGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC + + P + ++D I S L++D GNYV+QHVL G I
Sbjct: 757 YGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIK 816
Query: 220 LLKGKFEELSLLRCGSHLVEK 240
L GK ++S + S++VEK
Sbjct: 817 ELAGKIVQMSQQKFASNVVEK 837
>gi|428162887|gb|EKX31992.1| hypothetical protein GUITHDRAFT_39628, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 52/270 (19%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA------------------- 90
GS F+Q L G ++ +FEA+ LMTD +G ++
Sbjct: 4 GSRFIQTKLDGANAQDRQLVFEALLPSSVGLMTDLFGNYVVQKFLERDLVKNGRNRLTCS 63
Query: 91 --------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLET 136
R +QK I+++ G P ++ + + + VI KC+E
Sbjct: 64 IPQVLELSLDMYGCRVVQKAIEVIEG-PRQEQLVRELQGNVMKCVRDQNGNHVIQKCIER 122
Query: 137 LDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
+ + + + +LA H GC + + + + +L I A+ L D
Sbjct: 123 SAPETVQFIVEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPILSEIVRSAKELVHDQ 182
Query: 197 SGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR------------- 243
GNYVVQHVL G + E I +G+ +S + S++VEK +
Sbjct: 183 YGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLLQVLLVTILDEVTGN 242
Query: 244 -----PSIFTPCQHKYGNFVIQQALRVTKG 268
PS+ + YGN+V+Q+AL V +G
Sbjct: 243 QPSGAPSVLDMMRDAYGNYVVQKALDVCEG 272
>gi|50302921|ref|XP_451398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640529|emb|CAH02986.1| KLLA0A09097p [Kluyveromyces lactis]
Length = 805
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 65/303 (21%)
Query: 26 GTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGY 85
G+ ++A+L Q I L K + G FLQ+ L + I+ + + +LM D +
Sbjct: 469 GSRYQDAVLEQFVGSIYSLCKDQHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPF 528
Query: 86 G---------------------------------CHLARSMQKLIKLLVGSPCISLVISA 112
G H R++QKL++ +++++
Sbjct: 529 GNYLMQKLFERINQRDRVEIVKNCSPQFMDIALDAHGTRALQKLVECTDTEEETQILVAS 588
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+ +++ V+ K LE + + +Y AA + +++ H GC + ++
Sbjct: 589 LQPSILSLSRDFKSNHVVQKMLENFSNKDTQFIYDAACDDIIKISNHRNGCCVVQRCLDF 648
Query: 173 MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL------GLGDLKYSEKICSLLKGKFE 226
+ L I + L+ +P GNYV+Q++L D KY++KI +LK
Sbjct: 649 GNTEQLDALCGKIVEKSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLKFNAI 708
Query: 227 ELSLLRCGSHLVEKYQRPSIFTPC----------------------QHKYGNFVIQQALR 264
+LSL + GS++VE R TP YGN+V+Q AL
Sbjct: 709 DLSLNKFGSNVVESILR----TPAVSDVMITKILNSNDESGLLKLLHDSYGNYVLQTALD 764
Query: 265 VTK 267
+ K
Sbjct: 765 IVK 767
>gi|398015064|ref|XP_003860722.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
gi|322498944|emb|CBZ34017.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
Length = 554
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 20/241 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
+ +QK+ + YK+ AV P M H S+QK+I+ + + ++
Sbjct: 248 ANFLIQKLFDIMPDDVRYKV--AVVAAPHICMI-SLTPHGTFSVQKMIETISTREEMKII 304
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
A + ++ + VI K L+ D E +Y A +A + +GC L
Sbjct: 305 CEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRC 364
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ ++ L+D + + +++DP GNYV+Q+VL D K ++ I +LS
Sbjct: 365 LEHASPRQKAALVDQVLACCLQIAQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLS 424
Query: 230 LLRCGSHLVEKYQR----------------PSIFTP-CQHKYGNFVIQQALRVTKGFQMT 272
+ + S+++EK R P I + Q YGN+V+Q AL + Q
Sbjct: 425 MNKFSSNVMEKVLRGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALTINAPVQAE 484
Query: 273 E 273
+
Sbjct: 485 Q 485
>gi|67481757|ref|XP_656228.1| pumilio domain-containing protein C6G9.14 [Entamoeba histolytica
HM-1:IMSS]
gi|56473414|gb|EAL50842.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 476
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
I LL G+ QK++ +S +I + F + + +G RS+QKLI
Sbjct: 191 ITLLMSDPFGNYLCQKLIEVVNSEQRIQIITKITPTFFIISKNIHG---TRSIQKLISCY 247
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMN--HFRELAT 158
+++I+ +++F + VI +CL+T + N ++ A ++ + ++AT
Sbjct: 248 STKEEQNMLINVISPYVIELIFDSNGNHVIQECLKTFGKSDNRFIFDAIVSDGNLVKVAT 307
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
H GC + I+ + L+D I ++ L KD GNYVVQ++L + + +
Sbjct: 308 HKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVT 367
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERN-II 277
+L +LS+ + S+++EK R Q + F+ Q VTK Q + N +I
Sbjct: 368 KMLLDDLIDLSMQKFSSNVIEKLVRSDEIEARQMIFDRFL--QIKDVTKLLQDSYANYVI 425
Query: 278 QE-LGQSS 284
Q L QSS
Sbjct: 426 QTCLDQSS 433
>gi|161138154|gb|ABX58009.1| pumilio-like protein 1 [Fasciola hepatica]
gi|161138156|gb|ABX58010.1| pumilio-like protein 1 [Fasciola hepatica]
Length = 178
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E++ + + + + +H ++TH GC + + + +L + H
Sbjct: 3 VVQKCVESVPAEHLQFIVDSFKDHVHSISTHSYGCRVIQRILEHCTPEQTAPILAELHQH 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L KD GNYV+QHVL G + +I L++G+ ELS+ + S++VEK
Sbjct: 63 TESLVKDQYGNYVIQHVLEHGKTEDKSRIVDLIRGRVAELSVHKFASNVVEK 114
>gi|5263312|gb|AAD41414.1|AC007727_3 Contains 3 PF|00806 Pumilio-family RNA binding domains (PUF)
[Arabidopsis thaliana]
Length = 252
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 62/234 (26%)
Query: 85 YGCHLARSM---QKLIKLLVGSPCISLVISAA-YRRFKDMMFSKEASSVIIKCLETLDEQ 140
Y +AR+M +++ KLL + + + +AA RRF ++ K AS V+ + + D++
Sbjct: 37 YFLMIARNMNGSKRIQKLLGKTDDVDALFAAAILRRFLHIITDKYASYVVRRGMTVFDKK 96
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
K + +Y H A+H+ HA LS D GN+
Sbjct: 97 KKKAMY----EHILHYASHIAR-----------------------DKHALVLSNDAYGNF 129
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE-----------------KYQR 243
V+Q VL L DL+ I L+G F +LS + GS++V+ + +
Sbjct: 130 VIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLETKESMVVVVEELMECEG 189
Query: 244 PSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIV----PFN 293
+ +++YGNF++ +ALRVT+ +E+ ++ G+V PF+
Sbjct: 190 DMLMRLARNEYGNFLVCKALRVTQ----------KEMVRTDLFWGLVHKLKPFH 233
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 53/282 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L + +F + + LMTD +G ++
Sbjct: 780 IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 839
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ + G + +V K + + +
Sbjct: 840 QKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLK-CVKDQNGN 898
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 899 HVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDEMHQ 958
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
H E L +D GNYV+QHVL G + K+ ++GK LS + S++VEK
Sbjct: 959 HVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKCVTHATR 1018
Query: 241 ------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ L V + Q
Sbjct: 1019 SERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQ 1060
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 53/282 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L + +F + + LMTD +G ++
Sbjct: 647 IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 706
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ + G + +V K + + +
Sbjct: 707 QKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLK-CVKDQNGN 765
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 766 HVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDEMHQ 825
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
H E L +D GNYV+QHVL G + K+ ++GK LS + S++VEK
Sbjct: 826 HVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKCVTHATR 885
Query: 241 ------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ L V + Q
Sbjct: 886 SERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQ 927
>gi|452821243|gb|EME28276.1| serine rich Pumilio family RNA binding domain pr otein [Galdieria
sulphuraria]
Length = 471
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 107 SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
S++ S A FKD+ + VI C + N+ LY +F ELATH +GC +
Sbjct: 257 SILSSVAKFLFKDV----NGAHVIQHCFLYWSSEDNQFLYHTIQENFLELATHRQGCCMI 312
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
++ + + I H L D GNYVVQH+L + +Y I L+G +
Sbjct: 313 QTSMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDSKNPRYIHDIMKKLQGHWY 372
Query: 227 ELSLLRCGSHLVEK-------YQRPSIFTPCQHK-----------YGNFVIQQALRVT 266
E+S+ + S++ EK QR + + YGN+VIQ+ L+V
Sbjct: 373 EMSMEKFSSNITEKCLQLAEATQRWEMIEELAQECSNIGNLLHDAYGNYVIQRMLQVA 430
>gi|315048481|ref|XP_003173615.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341582|gb|EFR00785.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1018
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R++QK+I+ + I VI A + +++ + VI KCL L + +Y
Sbjct: 670 HGTRALQKMIEFISTPEQIQTVIHALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYD 729
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A + TH GC L I+ G +R L++ I+ + L +DP GNYV+Q++
Sbjct: 730 AVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYICR 789
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHKYGNFVIQQALRVTK 267
L + + L G F +LS + P++ + K+ + VI++ +R T
Sbjct: 790 LTSSTWILE-SLFLPGHFAQLS----------REASPAL---SKQKFSSNVIEKCIR-TS 834
Query: 268 GFQMTERNIIQEL 280
F M R I+E+
Sbjct: 835 DFNM-RRAFIKEM 846
>gi|242020205|ref|XP_002430546.1| pumilio, putative [Pediculus humanus corporis]
gi|212515710|gb|EEB17808.1| pumilio, putative [Pediculus humanus corporis]
Length = 588
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 64/293 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +F + ++LMTD +G ++ +QK +
Sbjct: 262 IVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPSAYNLMTDVFGNYV---IQKFFEF- 317
Query: 101 VGSPCISLVISAAYR-----------------RFKDMMFSKE------------------ 125
G+P ++S R + + + S++
Sbjct: 318 -GTPEQKAILSQIVRGHVLLLALQMYGCRVIQKALESLTSEQQQEIVRELDGHVLKCVKD 376
Query: 126 --ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ V+ KC+E +D + + A L+TH GC + + + +L+
Sbjct: 377 QNGNHVVQKCIERVDPHALQFIINALSGQVFALSTHPYGCRVIQRILEHCTPEQVAPILE 436
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ SHAE L +D GNYV+QHVL G + KI + ++GK LS + S++VEK
Sbjct: 437 ELHSHAEQLVQDQFGNYVIQHVLEHGKPEDKSKIINNVRGKVLALSQHKFASNVVEKCVT 496
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
Y ++ + +Y N+V+Q+ + V + T+R I+
Sbjct: 497 HATRTERSVLIEEVCNYNDNALQLMMKDQYANYVVQKMIDVC---EPTQRKIL 546
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 53/282 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L + +F + + LMTD +G ++
Sbjct: 815 IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 874
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ + G + +V K + + +
Sbjct: 875 QKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLK-CVKDQNGN 933
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 934 HVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDEMHQ 993
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
H E L +D GNYV+QHVL G + K+ ++GK LS + S++VEK
Sbjct: 994 HVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKCVTHATR 1053
Query: 241 ------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ L V + Q
Sbjct: 1054 SERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQ 1095
>gi|302142233|emb|CBI19436.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 24/140 (17%)
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
A N F E+AT+ GC L + + +G R L+ I ++A L++D GNYVVQH++G
Sbjct: 17 VAENCF-EIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQHLMG 75
Query: 208 LGDLKYSEKICSLLK---GKFEELSLLRCGSHLVEKY-----------------QRPSIF 247
LK E I +LLK G F LS + GS++VEK+ + P++
Sbjct: 76 ---LKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPNVS 132
Query: 248 TPCQHKYGNFVIQQALRVTK 267
+GNFVIQ AL V+K
Sbjct: 133 MLLLDPFGNFVIQSALSVSK 152
>gi|145553034|ref|XP_001462192.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430030|emb|CAK94819.1| unnamed protein product [Paramecium tetraurelia]
Length = 470
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ ++ + + FDL + Y C + + M + IK + +
Sbjct: 201 GNYTVQKVFEVGSQDQKQRMHNLLINHIFDLSKNQYACRVVQKMMEFIKDYPEQ--LEIF 258
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM--NHFRELATHVRGCVSLN 167
+ Y ++ + VI+ C E + KN+++++ M + + ++ GC +
Sbjct: 259 LQNFYPYIIPLLNDPNGNYVILSCFELFN--KNQLIFIIPMIEDSLQFMSKQTYGCRVIQ 316
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
+ ++D++ + A L GNY++Q++L G K + IC ++K FE+
Sbjct: 317 KVLEIYPIEHTQKMMDILMTLACQLCYQEFGNYIIQYILKSGPPKEKQIICQIIKDNFEQ 376
Query: 228 LSLLRCGSHLVEKY 241
LS+ + GS+ VEKY
Sbjct: 377 LSINKFGSNSVEKY 390
>gi|401828248|ref|XP_003888416.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
gi|392999688|gb|AFM99435.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
Length = 529
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 34/232 (14%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QKL+ + SP + ++ +++ + + VI KC+E +++ +
Sbjct: 301 YGC---RVIQKLVDV---SPDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRRIIL 354
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ + F LATH GC + + + +++++ S+ + L D GNYV+QH
Sbjct: 355 KQFSENSLF--LATHKYGCRVIQRMLEFCKEEEIKDIVEVLISNIKTLVDDQYGNYVIQH 412
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---------------------QR 243
+L +G K + + K ELS + S++VE+ +
Sbjct: 413 ILTVGKEKERNLVIEKIIEKSYELSKCKFSSNVVEQCVKLSNNGQREQFLEKFLEPVGAK 472
Query: 244 PSIFTPCQHKYGNFVIQQ-----ALRVTKGFQMTERNIIQELGQSSFIQGIV 290
P +++ C YGN+V+Q+ + K + T R +++L +S F + I+
Sbjct: 473 PGMYSMCIDMYGNYVVQRLYDSSGENIRKEIKNTLRPFVRDLKKSPFARHIL 524
>gi|449710016|gb|EMD49164.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 476
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
I LL G+ QK++ +S +I + F + + +G RS+QKLI
Sbjct: 191 ITLLMSDPFGNYLCQKLIEVVNSEQRIQIITKITPTFFIISKNIHG---TRSIQKLISCY 247
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMN--HFRELAT 158
+++I+ +++F + VI +CL+T + N ++ A ++ + ++AT
Sbjct: 248 STKEEQNMLINVISPYVIELIFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVAT 307
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
H GC + I+ + L+D I ++ L KD GNYVVQ++L + + +
Sbjct: 308 HKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVT 367
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERN-II 277
+L +LS+ + S+++EK R Q + F+ Q VTK Q + N +I
Sbjct: 368 KMLLDDLIDLSMQKFSSNVIEKLVRSDEIEARQMIFDRFL--QIKDVTKLLQDSYANYVI 425
Query: 278 QE-LGQSS 284
Q L QSS
Sbjct: 426 QTCLDQSS 433
>gi|403364711|gb|EJY82128.1| Pumilio-family RNA binding protein [Oxytricha trifallax]
Length = 994
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ F QK+++ S I + + + D G H SMQ +I ++ +
Sbjct: 725 GNYFCQKLMTSASSQQRLVILTELRPNLYKISCDKKGTH---SMQCMIDMINMPEEQHEI 781
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
DM + A+ V+ K + E+K + +Y M +F EL+ G +
Sbjct: 782 QEGVVNHILDMAYDINANHVLQKIMVCFKEEKLDFIYQPIMKYFIELSMDQNGLCVIKKL 841
Query: 170 INEMRGPRRG-GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
I ++ + + L++ HA L ++P GNY VQ + + D++Y E I L+ +L
Sbjct: 842 IGKITNEDKILEIQHLLAEHAVKLVQNPYGNYAVQQAIEVWDVRYCEPIFEKLEDHLMQL 901
Query: 229 SLLRCGSHLVEK 240
S+ + S+++EK
Sbjct: 902 SVQKFSSNVIEK 913
>gi|145511442|ref|XP_001441646.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408901|emb|CAK74249.1| unnamed protein product [Paramecium tetraurelia]
Length = 521
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 23/253 (9%)
Query: 7 RPDLNRGIGIANLSTSIGPGTYGKNALLA-----QPDYDIVLLGKTEGGSLFLQKMLSGK 61
PD+ I I++L S+ L P+ ++++ K E S +QK + G
Sbjct: 172 EPDIETDIYISSLIDSLWGNQIVSRKLQKLIESGTPEQQLLIVQKLERISPQIQKDVFGN 231
Query: 62 -----------DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI-SLV 109
D + ++F + + +DL + +GC R MQKLI+ G I + +
Sbjct: 232 YVVQKIFDSCGDVKLKTRMFNKLKTHFYDLSKNPFGC---RVMQKLIEYSQGKEDIQNSI 288
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+S + + +++ + VI K LE+ D+ K E L F +A + GC ++
Sbjct: 289 LSQLVQNMRSLIYDSNGNYVIFKMLESYDKSKMEFLIPIVEESFHYMAQQIYGCKIIHKI 348
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK--ICSLLKGKFEE 227
I + L+ ++ LS+ GNY++QH+L + EK + L+ +F +
Sbjct: 349 IQQYPPNFIANLVKQSIANYSGLSQTEFGNYILQHILQFW-IPSPEKTRLIQLVIQQFYQ 407
Query: 228 LSLLRCGSHLVEK 240
LS+ + S+ VE+
Sbjct: 408 LSINKYASNTVER 420
>gi|62718869|emb|CAG25892.1| Pumilio homolog [Dugesia japonica]
Length = 925
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 40/236 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
+V + + GS F+Q+ L +F + + LMTD +G ++
Sbjct: 554 VVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFGNYVIQRFFDLGTPE 613
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSK 124
R +QK ++ + I++V + + KD +
Sbjct: 614 QIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKD----Q 669
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ V+ KC+E + + + + A ++ L+TH GC + + + +L
Sbjct: 670 NGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAE 729
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ E L KD GNYV+QHVL G + KI +LL+G+ ELS+ + S++VEK
Sbjct: 730 LHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEK 785
>gi|385303007|gb|EIF47109.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 435
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 108/303 (35%), Gaps = 67/303 (22%)
Query: 31 NALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL- 89
NA L +I L K + G FLQ+ L KIF + +LM D +G +L
Sbjct: 24 NATLXDFTNEIYYLCKDQHGCRFLQRQLEVGGPEAATKIFNEIQLNVIELMIDPFGNYLI 83
Query: 90 --------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRF 117
R++QKL++ + +++S+
Sbjct: 84 QKLLERVNEKQRTTLVRNASSQFVRIALDPHGTRALQKLVECVNTKEEFQIIVSSLSSYV 143
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+ + VI KCL+ L ++ AA H ++A H GC L + +
Sbjct: 144 VLLSRDLNGNHVIQKCLQKLPPSSCNFIFDAACEHCVKIAKHRHGCCVLQRCFDHGSPAQ 203
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK------------------ICS 219
L + + LS DP GNYVVQ+VL + + + + I +
Sbjct: 204 CENLSLKVGENXVELSTDPYGNYVVQYVLSMEETRLRSQHDEEAVANTPDTSKAIGLIIT 263
Query: 220 LLKGKFEELSLLRCGSHLVEKYQRPSIFTPC----------------QHKYGNFVIQQAL 263
L+ LS + GS++VEK R P YGN+V+Q L
Sbjct: 264 ALRDNLVRLSTHKFGSNVVEKSLRIPTLAPVLIGQLLKEPDIPIILLHDAYGNYVLQTTL 323
Query: 264 RVT 266
V
Sbjct: 324 DVA 326
>gi|145480939|ref|XP_001426492.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393567|emb|CAK59094.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 23/253 (9%)
Query: 7 RPDLNRGIGIANLSTSIGPGTYGKNALLA-----QPDYDIVLLGKTEGGSLFLQKMLSGK 61
PD+ I I++L S+ L P+ ++++ K E S +QK + G
Sbjct: 96 EPDIETDIYISSLIDSLWGNQIVSRKLQKLIESGTPEQQLLIVQKLERISPQIQKDVFGN 155
Query: 62 -----------DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI-SLV 109
D + ++F + + +DL + +GC R MQKLI+ G I + +
Sbjct: 156 YVVQKIFDSCGDVKLKTRMFNKLKTHFYDLSKNPFGC---RVMQKLIEYSQGKEDIQNSI 212
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+S + + +++ + VI K LE+ D+ K E L F +A + GC ++
Sbjct: 213 LSQLVQNMRSLIYDSNGNYVIFKMLESYDKSKMEFLIPIVEESFHYMAQQIYGCKIIHKI 272
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK--ICSLLKGKFEE 227
I + L+ ++ LS+ GNY++QH+L + EK + L+ +F +
Sbjct: 273 IQQYPPNFIANLVKQSIANYSGLSQTEFGNYILQHILQFW-IPSPEKTRLIQLVIQQFYQ 331
Query: 228 LSLLRCGSHLVEK 240
LS+ + S+ VE+
Sbjct: 332 LSINKYASNTVER 344
>gi|15219041|ref|NP_173581.1| protein pumilio 20 [Arabidopsis thaliana]
gi|332192006|gb|AEE30127.1| protein pumilio 20 [Arabidopsis thaliana]
Length = 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 62/234 (26%)
Query: 85 YGCHLARSM---QKLIKLLVGSPCISLVISAA-YRRFKDMMFSKEASSVIIKCLETLDEQ 140
Y +AR+M +++ KLL + + + +AA RRF ++ K AS V+ + + D++
Sbjct: 93 YFLMIARNMNGSKRIQKLLGKTDDVDALFAAAILRRFLHIITDKYASYVVRRGMTVFDKK 152
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
K + +Y H A+H+ HA LS D GN+
Sbjct: 153 KKKAMY----EHILHYASHIAR-----------------------DKHALVLSNDAYGNF 185
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE-----------------KYQR 243
V+Q VL L DL+ I L+G F +LS + GS++V+ + +
Sbjct: 186 VIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLETKESMVVVVEELMECEG 245
Query: 244 PSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFIQGIV----PFN 293
+ +++YGNF++ +ALRVT+ +E+ ++ G+V PF+
Sbjct: 246 DMLMRLARNEYGNFLVCKALRVTQ----------KEMVRTDLFWGLVHKLKPFH 289
>gi|340373711|ref|XP_003385383.1| PREDICTED: pumilio homolog 2-like [Amphimedon queenslandica]
Length = 459
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 51/281 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
+V K + GS F+Q+ L +F + + L+TD +G ++ +
Sbjct: 132 VVDFAKDQHGSRFIQQKLEQCSDEDKDMVFSEILPASYSLITDVFGNYVIQKFFEFGTID 191
Query: 94 QK--LIKLLVGS-PCISL------VISAAYRRFKDMMFS----------------KEASS 128
QK L+ L G P +SL VI A + + + +
Sbjct: 192 QKATLVDRLHGHVPSLSLHTYGCRVIQKAIESVPPYLQAEIINELDGFVLKSIRDQNGNH 251
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E +D + ++ ++ATH GC + + + LL I H
Sbjct: 252 VIQKCIECVDPPLLTFIIVSFKGQVYDMATHPYGCRVIQRILEHCTAQQTDLLLKEIHLH 311
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
A+ L D GNYVVQHVL G + +I +++G+ LS + S++VEK +
Sbjct: 312 ADQLIADNYGNYVVQHVLEKGRPEQKSRIIGVIRGRVVSLSQHKFASNVVEKCIVHASRH 371
Query: 242 QRP------------SIFTPCQHKYGNFVIQQALRVTKGFQ 270
+R +I T + ++ N+V+Q+ L + + Q
Sbjct: 372 ERAGLIDELCSAPEGAILTMTKDQFANYVVQKMLDIAEPSQ 412
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
+ + G+ +QK + D + I + +D+ T YGC R +Q++++
Sbjct: 245 RDQNGNHVIQKCIECVDPPLLTFIIVSFKGQVYDMATHPYGC---RVIQRILEHCTAQQ- 300
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLET-LDEQKNEVL-----YLAAMNHFRELATH 159
L++ + ++ + V+ LE EQK+ ++ + +++ + +
Sbjct: 301 TDLLLKEIHLHADQLIADNYGNYVVQHVLEKGRPEQKSRIIGVIRGRVVSLSQHKFASNV 360
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAE----FLSKDPSGNYVVQHVLGLGDLKYSE 215
V C+ ++ R R GL+D + S E ++KD NYVVQ +L + + +
Sbjct: 361 VEKCI-----VHASRH-ERAGLIDELCSAPEGAILTMTKDQFANYVVQKMLDIAEPSQRK 414
Query: 216 KICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ L+ L H+V K +R
Sbjct: 415 MLIYRLRPHLPTLRKFTYAKHIVNKIER 442
>gi|321248782|ref|XP_003191239.1| RNA binding protein Pumilio [Cryptococcus gattii WM276]
gi|317457706|gb|ADV19452.1| Pumilio-like protein 2 (Pumilio-2) [Cryptococcus gattii WM276]
Length = 673
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
IV + GS F+Q+ L S K+F+ +Y + LMTD +G ++ + M +L
Sbjct: 298 IVEFAGDQHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFEHGDQL 357
Query: 97 IKLLVGSPCISLVISAAYRRFK--------DMMFSKEASSV-------IIKCLETLDEQ- 140
K + V+ + + + D + +++ + + I++C+++ +
Sbjct: 358 QKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANH 417
Query: 141 ---------KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
+ + + + H ELA H GC L + + LLD +
Sbjct: 418 VVQRMINIGPPQSIPDSFIGHVEELAKHPYGCRVLQKAFENLEDKMKRSLLDEMHECVIP 477
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYV+Q V+ +G+ + KI + LKG+ L+ + S++VEK
Sbjct: 478 LTEDQFGNYVIQSVITVGEPEDRNKIINQLKGRITTLARHKFASNVVEK 526
>gi|300123315|emb|CBK24588.2| unnamed protein product [Blastocystis hominis]
Length = 497
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QK+L D + + E + K ++ + H RS+QKLI++ G +
Sbjct: 219 GNYLFQKLL---DVSSVEQRREVLRKVKHKIVAASFDVHGTRSVQKLIQICHGQEDMLKD 275
Query: 110 ISAAYR-RFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
I A R + + VI +CL + E+ +Y + ++ GC +
Sbjct: 276 IMDALRGNIAKLSSDSNGNHVIQRCLNHMPEEYKVYVYEEVVKSCVNISMQRHGCCVVQR 335
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
++ +LD I + A L DP GNYV+Q+++ G E+I + GK L
Sbjct: 336 CLDFAPEKYHNMMLDAIVNSAVELICDPFGNYVIQYLIEKGKESEKERIARCVLGKVVAL 395
Query: 229 SLLRCGSHLVEKY-----------------QRPSIFTPCQHKYGNFVIQQALRV-TKGFQ 270
S + S+++EK + P + Y N+VIQQAL++ +KG Q
Sbjct: 396 SCQKYSSNVIEKILLFAPESVRNEVVAELAECPKLRDVLHDIYANYVIQQALKLESKGQQ 455
Query: 271 MTERNII----QELGQSS 284
N + +EL +S+
Sbjct: 456 RMLYNAVRPYEEELSRST 473
>gi|167377764|ref|XP_001734530.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903897|gb|EDR29287.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 476
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 39/272 (14%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------------------- 89
G +LQ+ L + T IFE + LM+D +G +L
Sbjct: 164 GCRYLQRQLEDNNPQTTKYIFEQMLPIITPLMSDPFGNYLCQKLIEVVNSEQRIQIIRKI 223
Query: 90 -------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLET 136
RS+QKLI +++I+ +++F + VI +CL+T
Sbjct: 224 TPTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPYVIELIFDSNGNHVIQECLKT 283
Query: 137 LDEQKNEVLYLAAMN--HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSK 194
+ N ++ +N + ++ATH GC + I+ + L+D I ++ L K
Sbjct: 284 FGKSDNGFIFDTIVNDDNLVKVATHKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLILVK 343
Query: 195 DPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHKY 254
D GNYVVQ++L + + + +L +LS+ + S+++EK R Q +
Sbjct: 344 DAFGNYVVQYILNVDIVGVIIDVTKMLLNDLIDLSMQKFSSNVIEKLIRSDEIEVRQMIF 403
Query: 255 GNFVIQQALRVTKGFQMTERN-IIQE-LGQSS 284
F+ Q VTK Q + N +IQ L QSS
Sbjct: 404 DKFL--QIKDVTKLLQDSYANYVIQTCLDQSS 433
>gi|303391583|ref|XP_003074021.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303303170|gb|ADM12661.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 528
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 34/232 (14%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QKL+ + S + ++ +++ + + VI KC+E ++K +
Sbjct: 300 YGC---RVVQKLVDV---SSDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRKIIL 353
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ + F LATH GC + + + G+++++ + + L D GNYV+QH
Sbjct: 354 QQFSENSLF--LATHKYGCRVIQRMLEFCKKDEIKGIVEVLIGNIKTLVDDQYGNYVIQH 411
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-------QR-------------- 243
+L +G + + + K ELS + S++VE+ QR
Sbjct: 412 ILAVGKEEERNLVIERIIEKSYELSKCKFSSNVVEQCVKLSNNGQREQFLEKFLEPVGGK 471
Query: 244 PSIFTPCQHKYGNFVIQQALR-----VTKGFQMTERNIIQELGQSSFIQGIV 290
P +++ C YGN+V+Q+ V K + T R +++L +S F + I+
Sbjct: 472 PGMYSMCTDMYGNYVVQRLYDSSGEGVRKEIKNTLRPFVKDLKKSPFARHIL 523
>gi|357445491|ref|XP_003593023.1| Pumilio homology domain family member [Medicago truncatula]
gi|355482071|gb|AES63274.1| Pumilio homology domain family member [Medicago truncatula]
Length = 454
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 69/308 (22%)
Query: 25 PGTYGKNALLAQPDYD--IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMT 82
P T + A P + +V + +LQ ++ + I V Y +LMT
Sbjct: 91 PHTDNYSNHFASPPWRGFVVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMT 150
Query: 83 DGYGCHLARSMQKLIKLLVGSPCISL-----VISAAYRRFKD------------------ 119
+G +L +QK+ + G C + +I + +R+ KD
Sbjct: 151 HRFGSYL---IQKIFQARRGMTCQQMDLTVFLIISNHRKLKDVCMDHHGTRAMQTMIANV 207
Query: 120 -------------------MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+M + S VI++C++ + +++ + ++AT
Sbjct: 208 RHPFTGYVVVYMLQHITIPLMKNVNGSYVIVQCVKFFPPKHKKIILDEVARNCVDIATDK 267
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLIS---SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKI 217
GC ++ ++ G R + L++ S+A LS+DP GNYVVQ V+ + +E++
Sbjct: 268 IGCSAVKKCLD--YGGRTSAIDILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQM 325
Query: 218 CSLLKGKFEELSLLRCGSHLV----------------EKYQRPSIFTPCQHK-YGNFVIQ 260
L+ KF+ LS+ + S++V E+ R F H YGN+V Q
Sbjct: 326 VQELRSKFDRLSVNKYASNVVEYLLSFSNQDAVKVIAEEIMRSRNFLNVLHDPYGNYVAQ 385
Query: 261 QALRVTKG 268
+ALR TKG
Sbjct: 386 RALRCTKG 393
>gi|158828286|gb|ABW81162.1| PMpt5-1 [Capsella rubella]
Length = 961
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V + GS F+Q+ L + ++E + LMTD +G ++ + +++ L
Sbjct: 641 VVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQALALMTDVFGNYVIQKAIEVVDLD 700
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+ + R +D + + V+ KC+E + E+ E + + L+TH
Sbjct: 701 QKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHP 756
Query: 161 RGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC + + P + +++ I + L++D GNYV+QHVL G I
Sbjct: 757 YGCRVIQRVLEHCHEPDTQSKVMEEIMTTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIK 816
Query: 220 LLKGKFEELSLLRCGSHLVEK 240
L GK ++S + S++VEK
Sbjct: 817 ELAGKIVQMSQQKFASNVVEK 837
>gi|146086139|ref|XP_001465465.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
gi|134069563|emb|CAM67886.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
Length = 554
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 20/241 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
+ +QK+ YK+ AV P M H S+QK+I+ + + ++
Sbjct: 248 ANFLIQKLFDIMPDDARYKV--AVVAAPHICMI-SLTPHGTFSVQKMIETISTREEMKII 304
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
A + ++ + VI K L+ D E +Y A +A + +GC L
Sbjct: 305 CEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRC 364
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ ++ L+D + + + +DP GNYV+Q+VL D K ++ I +LS
Sbjct: 365 LEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLS 424
Query: 230 LLRCGSHLVEKYQR----------------PSIFTP-CQHKYGNFVIQQALRVTKGFQMT 272
+ + S+++EK R P I + Q YGN+V+Q AL + Q
Sbjct: 425 MNKFSSNVMEKVLRGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALTINAPVQAE 484
Query: 273 E 273
+
Sbjct: 485 Q 485
>gi|145475869|ref|XP_001423957.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391019|emb|CAK56559.1| unnamed protein product [Paramecium tetraurelia]
Length = 457
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D+ LL K + G+ +QK++ + + IFE ++ Y D+ D +GC R +QKL++
Sbjct: 180 DLPLLSKHKFGNYVIQKIIENSNQNLRTLIFEQLHPYLIDMCYDKFGC---RVIQKLLEF 236
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+ I L+ S + +++F + + VI K ++ E E + N+ + +H
Sbjct: 237 IQNHQKIQLIQSIKSQVL-NLIFDQCGNHVIQKIIDLASE--AEFIIDIVTNNVDHIVSH 293
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC + + L + E L GNY+VQH++ G K E I
Sbjct: 294 PYGCRIAQKCLEIFPNQKLQQLYISLIPLCERLQFCQYGNYIVQHMITQGPPKGFEVIGK 353
Query: 220 LLKGKFEELSLLRCGSHLVEKY 241
+K + E+S + S++ +KY
Sbjct: 354 FVKARILEVSQDKYASNVAQKY 375
>gi|396082534|gb|AFN84143.1| Puf RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 529
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QKL+ + SP + ++ +++ + + VI KC+E +++ +
Sbjct: 301 YGC---RVIQKLVDV---SPDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRRIIL 354
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ + F LATH GC + + + +++++ ++ + L D GNYV+QH
Sbjct: 355 QQFSKNSLF--LATHKYGCRVIQRMLEFCKEEEIKDIVEILINNIKTLVDDQYGNYVIQH 412
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---------------------QR 243
+L +G K + + K ELS + S++VE+ +
Sbjct: 413 ILTVGKEKEKNLVIEKIIEKSYELSKCKFSSNVVEQCVKLSNNGQRERFLEKFLEPVGSK 472
Query: 244 PSIFTPCQHKYGNFVIQQ-----ALRVTKGFQMTERNIIQELGQSSFIQGIV 290
P +++ C YGN+V+Q+ + K + R I++L +S F + I+
Sbjct: 473 PGMYSMCIDMYGNYVVQRLYDSSGENIRKEIKNALRPFIRDLKKSPFARHIL 524
>gi|240280462|gb|EER43966.1| mRNA binding protein Pumilio 2 [Ajellomyces capsulatus H143]
Length = 900
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 58/286 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 545 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 604
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A D S KE + ++KC++ D+
Sbjct: 605 QKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVK--DQNG 662
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + P R +L+ +
Sbjct: 663 NHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAVLEELH 722
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QHV+G G+ +I S++ + S + S++VEK
Sbjct: 723 ACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGA 782
Query: 242 --QRPSIF----TP-----------CQHKYGNFVIQQALRVTKGFQ 270
QR I TP + +YGN+VIQ+ L G +
Sbjct: 783 DDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLE 828
>gi|395333575|gb|EJF65952.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 410
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 59/287 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSM------ 93
IV + GS F+Q+ L S +F E V +Y LM D +G ++ + M
Sbjct: 52 IVEFSGDQHGSRFIQQKLESASSEEMEIVFDEIVPQYAVQLMQDVFGNYVVQKMFEYGTA 111
Query: 94 ---QKLIKLLVGSPC-ISL------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQ 140
+L+ + G +SL V+ A + +MF +E S +++C++ D
Sbjct: 112 AQKARLVSTMEGQVLGLSLQMYGCRVVQKAIEYVGPDQQVMFVQELSPSVLRCVK--DAN 169
Query: 141 KNEVLY----------LAAMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ LA +N FR EL+TH GC L + + LLD +
Sbjct: 170 GNHVIQKIIEHVVPERLAFVNAFRGSVYELSTHPYGCRVLQRCFEYLPDEQTRPLLDELH 229
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQR 243
+ L D GNYVVQ VL G + I + L G+ ++ + S++ EK
Sbjct: 230 KYVSNLMIDQFGNYVVQFVLEHGTPQDRAMIIAKLTGQMNNMAKHKFASNVCEKALVTAD 289
Query: 244 PS--------IFTPCQHK------------YGNFVIQQALRVTKGFQ 270
P I TP Q +GN+V+Q+AL V +G Q
Sbjct: 290 PDSRRQLIDEIMTPKQQDGPSPLMSLMKDSFGNYVLQRALTVAEGEQ 336
>gi|325096471|gb|EGC49781.1| pumilio [Ajellomyces capsulatus H88]
Length = 876
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 58/286 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 457 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 516
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A D S KE + ++KC++ D+
Sbjct: 517 QKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVK--DQNG 574
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + P R +L+ +
Sbjct: 575 NHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAVLEELH 634
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QHV+G G+ +I S++ + S + S++VEK
Sbjct: 635 ACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGA 694
Query: 242 --QRPSIF----TP-----------CQHKYGNFVIQQALRVTKGFQ 270
QR I TP + +YGN+VIQ+ L G +
Sbjct: 695 DDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLE 740
>gi|225560981|gb|EEH09262.1| pumilio domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 917
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 58/286 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 498 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 557
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A D S KE + ++KC++ D+
Sbjct: 558 QKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVK--DQNG 615
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + P R +L+ +
Sbjct: 616 NHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAILEELH 675
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QHV+G G+ +I S++ + S + S++VEK
Sbjct: 676 ACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGA 735
Query: 242 --QRPSIF----TP-----------CQHKYGNFVIQQALRVTKGFQ 270
QR I TP + +YGN+VIQ+ L G +
Sbjct: 736 DDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLE 781
>gi|198433949|ref|XP_002130197.1| PREDICTED: similar to pumilio 2 [Ciona intestinalis]
Length = 1043
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + L YGC R +QK ++ + + +V
Sbjct: 740 GNYVIQKFFEFGSLEHKLALANCIHGHVLPLALQMYGC---RVIQKALECIPQEQQVEIV 796
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + + + + L++H GC +
Sbjct: 797 KELDGHLLK-CVKDQNGNHVVQKCIECVPPAQLQFIVDGFKGQVVGLSSHPYGCRVMQRI 855
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + G +L+ + H+E L KD GNYV+QH+L G + +I + L+G+ LS
Sbjct: 856 LEHCNEDQTGPILEELHQHSEMLVKDQYGNYVIQHILEHGRTENKNQIINELRGRILTLS 915
Query: 230 LLRCGSHLVEK-----------------YQRP-SIFTPCQHKYGNFVIQQALRV 265
+ S+++EK Q P ++F + +Y N+V+Q+ L V
Sbjct: 916 QHKFASNVIEKCVSHSSPQTRAWLIDEVCQEPDALFIMMKDQYANYVVQKMLDV 969
>gi|196010159|ref|XP_002114944.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
gi|190582327|gb|EDV22400.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
Length = 488
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--------ARS 92
IV + + GS F+Q+ L + +F + +DLMTD +G ++ +
Sbjct: 147 IVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVIQKFFEFGSSE 206
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
++L+ V + L VI A + KE ++KC++ D+
Sbjct: 207 QKQLLAERVKGHVLPLALQMYGCRVIQKALESIPVEQQTEVVKELDGHVLKCVK--DQNG 264
Query: 142 NEVLYLAA-----------MNHFRE----LATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ +N F++ L+TH GC + + + +LD +
Sbjct: 265 NHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCTPEQTEPILDELH 324
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L D GNYV+QHVL G L+ KI S L GK ELS + S+++EK
Sbjct: 325 EATEQLVLDQYGNYVIQHVLEHGRLEDKSKIISKLTGKIVELSQHKFASNVIEK 378
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + G + G +L+
Sbjct: 916 QNGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGPVLE 975
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-- 241
+ H E L +D GNYVVQHVL G + +I + ++G+ LS + S++VEK
Sbjct: 976 ELHQHTEQLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQHKFASNVVEKCVT 1035
Query: 242 --------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+++T + +Y N+V+Q+ + V +
Sbjct: 1036 HASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAE 1081
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 19/172 (11%)
Query: 107 SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
S ++ AAY D+ + VI K E ++ + L L H LA + GC +
Sbjct: 831 SEILGAAYNLMTDVF----GNYVIQKFFEFGSAEQKQALALKVKGHVLPLALQMYGCRVI 886
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
+ + ++ ++ + H KD +GN+VVQ + D + I + +G+
Sbjct: 887 QKALESISPDQQKEVVKELDGHVLKCVKDQNGNHVVQKCIECVDPSALQFIINAFQGQVF 946
Query: 227 ELS--------LLRCGSHLVEKYQRPSIFTPCQH-------KYGNFVIQQAL 263
LS + R H + P + QH +YGN+V+Q L
Sbjct: 947 CLSTHPYGCRVIQRILEHCTGEQTGPVLEELHQHTEQLVQDQYGNYVVQHVL 998
>gi|358345510|ref|XP_003636820.1| Pumilio domain-containing protein [Medicago truncatula]
gi|358348879|ref|XP_003638469.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355502755|gb|AES83958.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355504404|gb|AES85607.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 679
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS--VIIKCLETLDEQKNEVL 145
H +RS++KL++ + L++SA ++ SK+ + V+ CL+ E
Sbjct: 299 HGSRSVEKLLEKVTTREQRGLIMSALTP--GAIVLSKDINGHRVVFNCLKNFPHADTEKF 356
Query: 146 YLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHV 205
+ L+ GC L ++ +G + L+ I HA L++D GNYV+QH+
Sbjct: 357 LGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKNLLIHEIILHAPLLAEDCYGNYVIQHL 416
Query: 206 LGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-----------------QRPSIFT 248
+ L S + L+ +F LS + GS++VEK+ P++
Sbjct: 417 ISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVEKFLHDSGVDISSCIIIELLNDPNVTR 476
Query: 249 PCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSS 284
YGNFVI AL KG + +N ++EL +++
Sbjct: 477 LLTDPYGNFVISTALNKFKGARFI-KNALEELVEAN 511
>gi|443699258|gb|ELT98839.1| hypothetical protein CAPTEDRAFT_180493 [Capitella teleta]
Length = 632
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK S + + V + L YGC R +QK ++ + + +V
Sbjct: 280 GNYVIQKFFEFGTSEQKQTLAQRVRGHVLPLALQMYGC---RVIQKALESIPSEMQVEIV 336
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E ++ ++ + L A L+TH GC +
Sbjct: 337 KELDGHVLK-CVKDQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRI 395
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +LD + H E L +D GNYV+QHVL G + KI S L+G+ LS
Sbjct: 396 LEHCVSEQTNPVLDELHVHTERLVQDQYGNYVIQHVLEHGRPEDKSKIVSELRGRVLVLS 455
Query: 230 LLRCGSHLVEK 240
+ S++VEK
Sbjct: 456 QHKFASNVVEK 466
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 21/187 (11%)
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
++SAAY D+ + VI K E ++ + L H LA + GC +
Sbjct: 267 ILSAAYSLMTDVF----GNYVIQKFFEFGTSEQKQTLAQRVRGHVLPLALQMYGCRVIQK 322
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + + ++ + H KD +GN+VVQ + + K + + KG+ L
Sbjct: 323 ALESIPSEMQVEIVKELDGHVLKCVKDQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTL 382
Query: 229 S--------LLRCGSHLVEKYQRP-----SIFTP--CQHKYGNFVIQQALRVTKGFQMTE 273
S + R H V + P + T Q +YGN+VIQ L G +
Sbjct: 383 STHPYGCRVIQRILEHCVSEQTNPVLDELHVHTERLVQDQYGNYVIQHVLE--HGRPEDK 440
Query: 274 RNIIQEL 280
I+ EL
Sbjct: 441 SKIVSEL 447
>gi|39644512|gb|AAH24218.2| PUM2 protein, partial [Homo sapiens]
Length = 489
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 154 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 213
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 214 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 273
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 274 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 333
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 334 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 393
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 394 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 443
>gi|157869162|ref|XP_001683133.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
gi|68224016|emb|CAJ05068.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
Length = 569
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 20/241 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
+ +QK+ + YK+ A+ P M H S+QK+I+ + + ++
Sbjct: 248 ANFLIQKLFDIMPDDVRYKV--AIVAAPQICMI-SLTPHGTFSVQKMIETISTREEMEII 304
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
A + ++ + VI K L+ D E +Y A +A + +GC L
Sbjct: 305 SEALCKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRC 364
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ ++ L+D + + + +DP GNYV+Q+VL D K ++ I +LS
Sbjct: 365 LEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVLEEHDSKINDTIALAFLPHLVQLS 424
Query: 230 LLRCGSHLVEKYQR----------------PSIFTP-CQHKYGNFVIQQALRVTKGFQMT 272
+ + S+++EK R P I + Q YGN+V+Q AL + Q
Sbjct: 425 MNKFSSNVMEKVLRGASGPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALTINAPVQAA 484
Query: 273 E 273
+
Sbjct: 485 Q 485
>gi|300120006|emb|CBK19560.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 20/262 (7%)
Query: 26 GTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGY 85
GT + L + I LL + G+ QK+L ++ V + D +
Sbjct: 22 GTSLVDVLYEEMGERIGLLMTNQFGNYLFQKILEMSSDQQRRQLLVMVQSQLREASKDVH 81
Query: 86 GCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVL 145
G R +QKLI L ++ ++ ++ + VI CL+++ + + L
Sbjct: 82 G---TRCVQKLIHLCRLPDMVNRILDGLCPFVVELCADVNGNHVIKCCLKSMAAELRQRL 138
Query: 146 YLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHV 205
++H E++ + GC + I G L D I +HA L +D NYV+Q++
Sbjct: 139 LDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDTIEAHALDLMRDRYANYVIQYL 198
Query: 206 LGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIFTPCQHK----- 253
+ S + C + EELS +C S++VEK R SI +
Sbjct: 199 IENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNRGDEATRDSIINEIVNASDLRS 258
Query: 254 -----YGNFVIQQALRVTKGFQ 270
Y N+VIQ+AL ++ Q
Sbjct: 259 MLLDPYANYVIQKALVLSNADQ 280
>gi|74148485|dbj|BAE36346.1| unnamed protein product [Mus musculus]
Length = 534
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 201 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 257
Query: 98 ----KLLVGSPCISLVISAA-----YRRFKDMMFS-----------------------KE 125
KL + + V+ A YR + + S +
Sbjct: 258 SLDQKLALATRIRGHVLPLALQMYGYRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 317
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 318 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 377
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 378 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 437
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 438 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 488
>gi|218192238|gb|EEC74665.1| hypothetical protein OsI_10341 [Oryza sativa Indica Group]
Length = 671
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 54/233 (23%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISA 112
+QK+L D +I + + P L+ H RS+QKLI+ + I L+ISA
Sbjct: 443 LVQKLLDVCDEEQRLRIIAILTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIMLIISA 502
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
F ++ + VI KCL+ D ++N+++Y H++ SLN
Sbjct: 503 LQPGFIHLVNDPNGNHVIQKCLKNFDAEENKIIYDGTDTHYKN---------SLNVLT-- 551
Query: 173 MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLR 232
NYV+Q+VL L + ++ SL +G + LS +
Sbjct: 552 --------------------------NYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQK 585
Query: 233 CGSHLVEKY-------QRPSIFTP----------CQHKYGNFVIQQALRVTKG 268
GS++VEK + +I Q Y N+VI AL T+G
Sbjct: 586 VGSNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALAQTRG 638
>gi|355714563|gb|AES05045.1| pumilio-like protein 2 [Mustela putorius furo]
Length = 600
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 267 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 323
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 324 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 383
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 384 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 443
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 444 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 503
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 504 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 554
>gi|345317188|ref|XP_001506884.2| PREDICTED: pumilio homolog 2-like [Ornithorhynchus anatinus]
Length = 429
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 96 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 152
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 153 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 212
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 213 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 272
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 273 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 332
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 333 SRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 383
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 35/219 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E +
Sbjct: 897 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPH 950
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ I H E L +D GNY
Sbjct: 951 ALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTEQLVQDQYGNY 1010
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI S ++G LS + S++VEK
Sbjct: 1011 VIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSM 1070
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1071 ADGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1106
>gi|326328009|pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
gi|326328011|pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
gi|326328013|pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 26 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 85
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 86 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 145
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 146 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 205
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 206 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 265
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 266 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 315
>gi|145506965|ref|XP_001439443.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406627|emb|CAK72046.1| unnamed protein product [Paramecium tetraurelia]
Length = 544
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 10/227 (4%)
Query: 19 LSTSIGPGTYGKNALLAQPDYDIV-LLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYP 77
L + GT + L+AQ I + K G+ +QK+ + I ++F + +
Sbjct: 224 LQKMLEQGTQEQKELIAQKLERISPQIEKDVFGNYVVQKLFECTNQKIQLRMFNKLKSHF 283
Query: 78 FDLMTDGYGCHLARSMQKLIKLLVG-SPCISLVISAAYRRFKDMMFSKEASSVIIKCLET 136
+DL + +GC R MQKLI+ +V+ + +++ + VI K LET
Sbjct: 284 YDLSKNNFGC---RVMQKLIEYTYNREELQLVVLQQLQSNMRSLIYDLNGNYVIFKMLET 340
Query: 137 LDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
D+ K E L F + + GC ++ I + + ++ L + LS+
Sbjct: 341 YDKLKMEFLIPIVEESFNYMGQQIYGCKIIHKVIQQYTPQQISRIIRLSVQNYSILSQTE 400
Query: 197 SGNYVVQHVLGLGDLKYSEK---ICSLLKGKFEELSLLRCGSHLVEK 240
GNYV+QH+L K S++ + L+ +F +LS+ + S+ VE+
Sbjct: 401 YGNYVLQHILQYW--KPSQEKGYLVQLVIQQFYQLSINKYASNTVER 445
>gi|327355572|gb|EGE84429.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 906
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 493 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQS 552
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
++++ + ++L V+ A D S KE + ++KC+ D+
Sbjct: 553 QKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVN--DQNG 610
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ + A H GC + + + P R +L +
Sbjct: 611 NHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDRQAILAELH 670
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ A L D GNYV+QHV+ G+ KI S++ + S + S++VEK
Sbjct: 671 ACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGA 730
Query: 242 --QRPSIF----TPCQH-----------KYGNFVIQQALRVTKG 268
QR I TP +YGN+V+Q L KG
Sbjct: 731 EGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKG 774
>gi|239614575|gb|EEQ91562.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ER-3]
Length = 932
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 519 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQS 578
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
++++ + ++L V+ A D S KE + ++KC+ D+
Sbjct: 579 QKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVN--DQNG 636
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ + A H GC + + + P R +L +
Sbjct: 637 NHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDRQAILAELH 696
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ A L D GNYV+QHV+ G+ KI S++ + S + S++VEK
Sbjct: 697 ACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGA 756
Query: 242 --QRPSIF----TPCQH-----------KYGNFVIQQALRVTKG 268
QR I TP +YGN+V+Q L KG
Sbjct: 757 EGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKG 800
>gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069698|emb|CAD26083.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 530
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QKL+ + S + ++ +++ + + VI KC+E + +N +
Sbjct: 302 YGC---RVIQKLVDV---SSDVDFILEEVRDNLLELIEDQNGNHVIQKCIEKCKD-RNII 354
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
L + N LATH GC + + R +++++ S+ + L D GNYV+QH
Sbjct: 355 LQQFSENSLF-LATHKYGCRVIQRMLEFCREDEIKNIVEVLISNIKTLVDDQYGNYVIQH 413
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---------------------QR 243
+L +G + + K ELS + S++VE+ +
Sbjct: 414 ILAVGKEDEKNLVIEKIIEKSYELSRCKFSSNVVEQCVKLSNNGQRERFLAKFLEPVGSK 473
Query: 244 PSIFTPCQHKYGNFVIQQ-----ALRVTKGFQMTERNIIQELGQSSFIQGIV 290
P +++ C YGN+V+Q+ + + + R +++L +S F + I+
Sbjct: 474 PGMYSMCVDMYGNYVVQRLYDSSGENIRREMKSALRPFVRDLKKSPFARHIL 525
>gi|261196167|ref|XP_002624487.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
gi|239587620|gb|EEQ70263.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
Length = 932
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 519 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQS 578
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
++++ + ++L V+ A D S KE + ++KC+ D+
Sbjct: 579 QKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVN--DQNG 636
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ + A H GC + + + P R +L +
Sbjct: 637 NHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDRQAILAELH 696
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ A L D GNYV+QHV+ G+ KI S++ + S + S++VEK
Sbjct: 697 ACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGA 756
Query: 242 --QRPSIF----TPCQH-----------KYGNFVIQQALRVTKG 268
QR I TP +YGN+V+Q L KG
Sbjct: 757 EGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKG 800
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 109/281 (38%), Gaps = 51/281 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH---------LAR 91
IV + + GS F+Q+ L T +F + + LMTD +G + L
Sbjct: 854 IVEFSQDQHGSRFIQQKLERATPTERQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGLPE 913
Query: 92 SMQKLIK-----------LLVGSPCISLVISAAYRRFKDMMF------------SKEASS 128
Q L + + G I + + + M + +
Sbjct: 914 QKQALAQRIRGHVLPLALQMYGCRVIQKALESIPPELQTEMVKELDGHVLKCVKDQNGNH 973
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E ++ + + A L+TH GC + + + LLD +
Sbjct: 974 VVQKCIECVEPAALQFIVDAFRGQVYSLSTHPYGCRVIQRILEHCIVEQTKPLLDELHQQ 1033
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
E L +D GNYV+QHVL G + KI ++GK LS + S++VEK
Sbjct: 1034 TESLVQDQYGNYVIQHVLEHGRPEDKSKIVLEMRGKVLVLSQHKFASNVVEKCITHSSRP 1093
Query: 241 -----------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
Y +++T + +Y N+V+Q+ + V++ Q
Sbjct: 1094 ERALLIDEVCSYNDGALYTMMKDQYANYVVQKMIDVSEPNQ 1134
>gi|161138162|gb|ABX58013.1| pumilio-like protein [Geoplana sp. UK-2007a]
Length = 173
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + + + + A ++ L+TH GC + + + +L +
Sbjct: 3 VVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILSELHHF 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L KD GNYV+QHVL G + KI +LL+G+ ELS+ + S++VEK
Sbjct: 63 TEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEK 114
>gi|58263134|ref|XP_568977.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263136|ref|XP_568978.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263138|ref|XP_568979.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223627|gb|AAW41670.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223628|gb|AAW41671.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223629|gb|AAW41672.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 673
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
IV + GS F+Q+ L K+F+ +Y + LMTD +G ++ + M +L
Sbjct: 298 IVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFEHGDQL 357
Query: 97 IKLLVGSPCISLVISAAYRRFK--------DMMFSKEASSV-------IIKCLET----- 136
K + V+ + + + D + +++ + + I++C+++
Sbjct: 358 QKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANH 417
Query: 137 -----LDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
++ + + + + H ELA H GC L + + LLD +
Sbjct: 418 VVQRIINTGPPQSIPDSFIGHVEELAKHPYGCRVLQKTFENLDDKMKRSLLDEMHKCVIP 477
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYV+Q V+ +G + K+ S LKG+ + + S++VEK
Sbjct: 478 LTEDQFGNYVIQSVITVGKPEDRNKVISQLKGRVTTFARHKFASNVVEK 526
>gi|297746040|emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 73 VYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSV 129
+Y + L YGC R +QK I+++ I +V R +D + + V
Sbjct: 98 LYGHVLTLSLQMYGC---RVIQKAIEVVDPDQKIKMVEELDGHIMRCVRD----QNGNHV 150
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSH 188
I KC+E + E + + + L+TH GC + + R P+ + ++D I
Sbjct: 151 IQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVMDEILGS 210
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G I L GK ++S + S++VEK
Sbjct: 211 VSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEK 262
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 791 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 850
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 851 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 910
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 911 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 970
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 971 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1020
>gi|290973641|ref|XP_002669556.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
gi|284083105|gb|EFC36812.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
Length = 788
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 32/232 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
+V + + GS F+Q+ L ++ IF+ + Y LMTD +G ++ A
Sbjct: 466 VVEFSRDQHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVIQKFFEFGNAP 525
Query: 92 SMQKLIKLLVGS-----------PCISLVISAAYRRFKDMMFS------------KEASS 128
+KL K L G+ I + KD + S + +
Sbjct: 526 QKKKLSKELQGNVLNLTLQTYGCRVIQKALEVIDNDDKDTVVSELKGNVMRCVQDQNGNH 585
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + + + + E A H GC + + + +L I +
Sbjct: 586 VIQKCIERVPPKIIQFIVDGFKGKVYEQAIHNYGCRVIQRILEHCTEGQTVPILQEILDN 645
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L DP GNYVVQHVL G + I + L K +ELS+ + S+++EK
Sbjct: 646 ILALVVDPYGNYVVQHVLDRGKPTFKSLIIAALSKKIQELSINKFASNVIEK 697
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 32/190 (16%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI-SL 108
G +Q++L T I + + L+ D YG ++ + + L G P SL
Sbjct: 619 GCRVIQRILEHCTEGQTVPILQEILDNILALVVDPYGNYVVQHV-----LDRGKPTFKSL 673
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+I+A ++ +++ +K AS+VI KC + ++++ + N
Sbjct: 674 IIAALSKKIQELSINKFASNVIEKCFQQANKKERD------------------------N 709
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
I E+ G D+ + + KD NYV+Q ++ D + I +K E++
Sbjct: 710 MITELIGDITS--RDISETPLFAMMKDQFANYVIQKIIETCDASQRKTITEAVKPHQEKI 767
Query: 229 SLLRCGSHLV 238
L G H++
Sbjct: 768 KKLPYGKHIL 777
>gi|449328595|gb|AGE94872.1| RNA-binding protein [Encephalitozoon cuniculi]
Length = 530
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QKL+ + S + ++ +++ + + VI KC+E + +N +
Sbjct: 302 YGC---RVVQKLVDV---SSDVDFILEEVRDNLLELIEDQNGNHVIQKCIEKCKD-RNII 354
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
L + N LATH GC + + R +++++ S+ + L D GNYV+QH
Sbjct: 355 LQQFSENSLF-LATHKYGCRVIQRMLEFCREDEIKNIVEVLISNIKTLVDDQYGNYVIQH 413
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---------------------QR 243
+L +G + + K ELS + S++VE+ +
Sbjct: 414 ILAVGKEDEKNLVIEKIIEKSYELSRCKFSSNVVEQCVKLSNNGQRERFLAKFLEPVGSK 473
Query: 244 PSIFTPCQHKYGNFVIQQ-----ALRVTKGFQMTERNIIQELGQSSFIQGIV 290
P +++ C YGN+V+Q+ + + + R +++L +S F + I+
Sbjct: 474 PGMYSMCVDMYGNYVVQRLYDSSGENIRREMKSALRPFVRDLKKSPFARHIL 525
>gi|357445829|ref|XP_003593192.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482240|gb|AES63443.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 198
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+++AA H ++ATH GC L I G R L+ IS++A L++D GNYVVQ+
Sbjct: 24 IFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQDKYGNYVVQY 83
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-----------------YQRPSIF 247
VL + + +G + +S+ + S +VEK P
Sbjct: 84 VLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKIIHELLSDPHFD 143
Query: 248 TPCQHKYGNFVIQQALRVTKG 268
Q + N+VIQ+ALR ++G
Sbjct: 144 LLLQDPHANYVIQKALRHSEG 164
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 792 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 851
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 852 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 911
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 912 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 971
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 972 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1021
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 792 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 851
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 852 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 911
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 912 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 971
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 972 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1021
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 791 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 850
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 851 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 910
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 911 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 970
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 971 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1020
>gi|154337334|ref|XP_001564900.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061938|emb|CAM38979.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 51/277 (18%)
Query: 45 GKTEGGSLFLQKMLSGK-DSTITYKIFEAVYKYPFDLMTDGYG----------------- 86
K + G +LQ+ L D + I + V + +LMTD Y
Sbjct: 207 AKDQHGCRYLQRWLDTNCDPEVVQVIMDEVIPHVGELMTDQYANFLIQKLFDIMPDDVRY 266
Query: 87 ----------CHLAR------SMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVI 130
C +A S+QK+I+ + + ++ A + ++ + VI
Sbjct: 267 KVAIVAAPQICMIALTPHGTFSVQKMIETISTRAEMEIICEALAKDVVRLVKDAHGNHVI 326
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
K L+ D E +Y A +A + +GC L + ++ L+D + +
Sbjct: 327 QKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEYASPQQKAALVDQVLACCL 386
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR------- 243
+ +DP GNYV+Q+VL D K ++ I +LS+ + S+++EK R
Sbjct: 387 QIVQDPFGNYVLQYVLEAHDSKINDTIALSFLPHLVQLSMNKFSSNVMEKVLRGASKPVQ 446
Query: 244 ---------PSIFTP-CQHKYGNFVIQQALRVTKGFQ 270
P I + Q +GN+V+Q AL + Q
Sbjct: 447 VLYVEEMCNPEIISRLIQDDFGNYVLQTALTINAPAQ 483
>gi|71407210|ref|XP_806089.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70869728|gb|EAN84238.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 370
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 58/282 (20%)
Query: 44 LGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL- 100
+ K + G FLQ++L G D I V + +LMTD Y L +QKL ++
Sbjct: 12 IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFL---IQKLFDMMP 68
Query: 101 ---------VGSPCI--------------SLVISAAYRRFKDMM---FSKEA-------- 126
V +P I +V + A R D++ SK+
Sbjct: 69 QDVRYKVARVAAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAH 128
Query: 127 -SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K L+ E +Y A + +A + +GC L + +R L++ I
Sbjct: 129 GNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQI 188
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+++DP GNYV+Q+VL D K ++ I +L + + S+++EK R +
Sbjct: 189 LRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGA 248
Query: 246 --------IFTPC---------QHKYGNFVIQQALRVTKGFQ 270
+ T C Q +GN+V+Q AL + Q
Sbjct: 249 SQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTICSSAQ 290
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 714 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 773
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 774 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 833
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 834 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 893
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 894 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 953
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 954 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1003
>gi|350585831|ref|XP_003482060.1| PREDICTED: pumilio homolog 1 isoform 2 [Sus scrofa]
Length = 594
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 304 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 357
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 358 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 417
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 418 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 477
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 478 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 537
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 538 DVAEPAQ 544
>gi|432096853|gb|ELK27431.1| Pumilio like protein 2 [Myotis davidii]
Length = 959
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 626 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 682
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 683 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 742
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 743 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 802
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 803 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 862
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+VIQ+ + + + Q R II
Sbjct: 863 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMAEPAQ---RKII 913
>gi|134107804|ref|XP_777513.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 673
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
IV + GS F+Q+ L K+F+ +Y + LMTD +G ++ + M +L
Sbjct: 298 IVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFEHGDQL 357
Query: 97 IKLLVGSPCISLVISAAYRRFK--------DMMFSKEASSV-------IIKCLET----- 136
K + V+ + + + D + +++ + + I++C+++
Sbjct: 358 QKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANH 417
Query: 137 -----LDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
++ + + + + H ELA H GC L + + LLD +
Sbjct: 418 VVQRIINTGPPQSIPDSFIGHVEELAKHPYGCRVLQKTFENLDDKMKRSLLDEMHKCVIS 477
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYV+Q V+ +G + K+ S L+G+ + + S++VEK
Sbjct: 478 LTEDQFGNYVIQSVITVGKPEDRNKVISQLRGRVTTFARHKFASNVVEK 526
>gi|357167245|ref|XP_003581070.1| PREDICTED: pumilio homolog 2-like [Brachypodium distachyon]
Length = 764
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + F+L YGC R +QK+I+++ I +V
Sbjct: 467 GNYVIQKFFEFATESQLNQLADKLNGRIFELSFHMYGC---RVVQKVIEVVDMDRKIDIV 523
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + VI KC+E + E++ + A ++ L TH GC +
Sbjct: 524 QELKNYVLK-CIGDQNGNHVIQKCIECVPEERIPFVIEAILSQIFMLCTHQYGCRVIQRV 582
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I HA L++D GNYVVQHVL G + I L G+ L
Sbjct: 583 LEHCHDPATQSAVMNEIVQHACGLTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFL 642
Query: 229 SLLRCGSHLVEK---YQRP--------SIFTPCQ-------HKYGNFVIQQALRV 265
S + S+++EK Y P I + Q ++GN+V+Q+ L+
Sbjct: 643 SQQKYASNVIEKCLVYGTPEERDGLIREIVSSGQTFQALMKDQFGNYVVQKVLQT 697
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 177 RRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCG 234
R G + +++SS F L KD GNYVVQ VL D ++ E I S +K EL G
Sbjct: 664 RDGLIREIVSSGQTFQALMKDQFGNYVVQKVLQTCDDRHLEMILSSIKLHLNELKTYTYG 723
Query: 235 SHLVEKYQRPSIFTPCQHKYGNFV--IQQALRVT 266
H+V + ++ I + + G+ QQ+L+ T
Sbjct: 724 KHIVSRIEKLIITGENRVRKGSKTCQCQQSLKCT 757
>gi|161138164|gb|ABX58014.1| pumilio-like protein [Girardia tigrina]
Length = 166
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + + + + A ++ L+TH GC + + + +L +
Sbjct: 3 VVQKCVECVPAEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHF 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L KD GNYV+QHVL G + KI +LL+G+ ELS+ + S++VEK
Sbjct: 63 TEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEK 114
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 115/291 (39%), Gaps = 57/291 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 94 QKL-IKLLVGSPCISL--------VISAAYRRFKDMMFS----------------KEASS 128
QKL + + + L VI A M S + +
Sbjct: 713 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDMQSEMVKELDGHVLKCVKDQNGNH 772
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q + + A L+TH GC + + + +L+ + H
Sbjct: 773 VVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQH 832
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------- 241
E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 833 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 892
Query: 242 ---------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 893 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 940
>gi|401421895|ref|XP_003875436.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491673|emb|CBZ26946.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 568
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 20/241 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
+ +QK+ + YK+ A+ P M H S+QK+I+ + ++
Sbjct: 248 ANFLIQKLFDIMPDDVRYKV--AIVAAPQICMI-SLTPHGTFSVQKMIETISTREETEII 304
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
A + ++ + VI K L+ D E +Y A +A + +GC L
Sbjct: 305 CEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVSTDCVSIAKNKQGCCVLQRS 364
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ ++ L+D + + + +DP GNYV+Q+VL D K ++ I LS
Sbjct: 365 LEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIAFAFLPHLVHLS 424
Query: 230 LLRCGSHLVEKYQR----------------PSIFTP-CQHKYGNFVIQQALRVTKGFQMT 272
+ + S+++EK R P I + Q YGN+V+Q AL + Q
Sbjct: 425 MNKFSSNVMEKVLRGASRPVQVMYMEEMCNPGIISHLIQDDYGNYVLQTALTINAPAQAE 484
Query: 273 E 273
+
Sbjct: 485 Q 485
>gi|17224452|gb|AAL36981.1|AF272350_1 translational repressor pumilio [Homo sapiens]
Length = 876
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 543 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 599
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 600 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 659
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 660 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 719
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 720 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 774
>gi|242556581|pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556583|pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556584|pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 28 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 84
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 85 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 144
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 145 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 204
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 205 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 264
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 265 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 315
>gi|8778970|gb|AAF79885.1|AC021198_5 Contains similarity to a putative RNA-binding protein AAF18550
gi|6587864 from Arabidopsis thaliana BAC T11I11
gb|AC012680. It contains Pumilio-family RNA binding
domains PF|00806 [Arabidopsis thaliana]
Length = 559
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 110/276 (39%), Gaps = 51/276 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V L G+ +QK+L D I + P +L+ + R +QK+IK +
Sbjct: 254 VVELSMDPLGNYIVQKLLVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTV 313
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV-------------LYL 147
I+LV SA F ++ V+ CLE L N++ L+L
Sbjct: 314 KTKQQIALVKSALEPGFLVLVNDSNGYHVLQSCLEFLVPNDNKLRLTKLSHILISFLLFL 373
Query: 148 ------------------AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
AA + +LATH GC L + G + L+ IS +
Sbjct: 374 TYVSSDECCEIWCQFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDS 433
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSE-KICSLLKGKFEELSLLRCGSHLVEKYQR----- 243
LS+DP GNYVVQ ++ D + S + + EL+ + SH++EK R
Sbjct: 434 LRLSQDPFGNYVVQCLI---DQQVSSVNLLLPFRTHCIELATQKFSSHVIEKCLRKYPES 490
Query: 244 -----------PSIFTPCQHKYGNFVIQQALRVTKG 268
P+ Q Y N+VIQ AL VTKG
Sbjct: 491 RAEIVRELLSYPNFEQLLQDPYANYVIQTALSVTKG 526
>gi|291399425|ref|XP_002716109.1| PREDICTED: pumilio 1-like isoform 2 [Oryctolagus cuniculus]
Length = 1092
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 802 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PADQQV 855
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 856 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 915
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 916 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 975
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 976 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1035
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1036 DVAEPGQ 1042
>gi|402225601|gb|EJU05662.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 356
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 35/248 (14%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK++ T IFEA+ + L YGC R +QK I+ + L+
Sbjct: 88 GNYVIQKLIEFGGETERNAIFEAMQGHFLILSWHMYGC---RVVQKAIEYITPEQQSQLI 144
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFR----ELATHVRGCVS 165
A K + + V+ K +E + + L + F+ +L+TH GC
Sbjct: 145 AELAPDIMK-CVKDANGNHVVQKLIERVSPDR-----LTFVEAFKGSVYDLSTHTYGCRV 198
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L + + + LLD + H L +D GNYVVQ VL G + ++ + L+G+
Sbjct: 199 LQRCLEHLTEEQTRPLLDELHEHTANLMQDQFGNYVVQFVLEHGQPEDRARVIAKLRGQM 258
Query: 226 EELSLLRCGSHLVEK------------------YQRPSIFTPCQ----HKYGNFVIQQAL 263
++ + S++ EK +P+ +P Q ++ N+V+Q+AL
Sbjct: 259 LMMACHKFASNVCEKALMTADSESRRLLIDELMTPKPNGVSPVQLMMKDQFANYVLQRAL 318
Query: 264 RVTKGFQM 271
V +G Q+
Sbjct: 319 SVVEGDQL 326
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 708
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 709 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 768
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 769 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEEL 828
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 829 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 888
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+VIQ+ + + + Q R II
Sbjct: 889 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMAEPAQ---RKII 939
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 791 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 850
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 851 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 910
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 911 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 970
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 971 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1020
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VIS R + + + V+ KC+E +
Sbjct: 908 YGC---RVIQKALEFI---PSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPH 961
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 962 ALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 1021
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------------------- 240
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1022 VIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAVLIDEVCSL 1081
Query: 241 YQRP--SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ P +++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1082 TEGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1117
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VIS R + + + V+ KC+E +
Sbjct: 907 YGC---RVIQKALEFI---PSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPH 960
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 961 ALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 1020
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------------------- 240
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1021 VIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTERAMLIDEVCGL 1080
Query: 241 YQRP--SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ P +++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1081 TEGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1116
>gi|189242503|ref|XP_967865.2| PREDICTED: similar to pumilio [Tribolium castaneum]
Length = 718
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 112/284 (39%), Gaps = 57/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +T +F + ++LMTD +G ++ +QK +
Sbjct: 381 IVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYV---IQKFFEFG 437
Query: 101 VGSPCISL-------VISAAYRRFKDMMFSKEASS------------------------- 128
+L V+ A + + + K S
Sbjct: 438 TAEQKTTLAQKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQN 497
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + + L+TH GC + + + +L +
Sbjct: 498 GNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILAEL 557
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 558 HQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKCVTHA 617
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ + V++ Q
Sbjct: 618 TRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQ 661
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VIS R + + + V+ KC+E +
Sbjct: 907 YGC---RVIQKALEFI---PSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPH 960
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 961 ALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 1020
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------------------- 240
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1021 VIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAVLIDEVCSL 1080
Query: 241 YQRP--SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ P +++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1081 TEGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1116
>gi|344245037|gb|EGW01141.1| Pumilio-like 1 [Cricetulus griseus]
Length = 364
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 74 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 127
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 128 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 187
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 188 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 247
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 248 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 307
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 308 DVAEPGQ 314
>gi|158828285|gb|ABW81161.1| unknown [Capsella rubella]
Length = 991
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+FE V P L YGC R +QK I+++ I +V
Sbjct: 679 FFEHGLPPQRRELGDKLFENVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 731
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + H L+TH GC +
Sbjct: 732 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGHVVSLSTHPYGCRVIQRV 787
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I S L++D GNYVVQHVL G I L GK ++
Sbjct: 788 LEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQM 847
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 848 SQQKFASNVVEK 859
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VIS R + + + V+ KC+E +
Sbjct: 904 YGC---RVIQKALEFI---PSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPH 957
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 958 ALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1017
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------------------- 240
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1018 VIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVLIDEVCSL 1077
Query: 241 YQRP--SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ P +++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1078 TEGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1113
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 732
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 733 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 792
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 793 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 852
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 853 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 907
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 59/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 791 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 850
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 851 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 910
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 911 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHAS 970
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 971 RAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1020
>gi|449452777|ref|XP_004144135.1| PREDICTED: uncharacterized protein LOC101212397 [Cucumis sativus]
Length = 746
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 44/265 (16%)
Query: 17 ANLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKY 76
AN T I P K L + I L+ K + G FLQ+M S IF + +
Sbjct: 404 ANRKTEIPPL---KCNSLDEATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHH 460
Query: 77 PFDLMTDGYGCHL-----------------------------------ARSMQKLIKLLV 101
+LM D +G +L R++QKLI+ L
Sbjct: 461 VSELMVDPFGNYLIQKLLGVCDEDQRLQILYKINRPGELIRISCNMHGTRAVQKLIETLK 520
Query: 102 GSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETL-DEQKNEVLYLAAMNHFRELATHV 160
SL++S +M + + V CL+ L + + L+ AA E+AT
Sbjct: 521 TPEQFSLIVSLLKTGIVILMKNVNGNHVAQHCLQYLMPDYIGKFLFDAATKSCVEVATDR 580
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK-----YSE 215
GC L + R LL + +A LS+D GNYVVQ L L +
Sbjct: 581 HGCCVLQKCLAVSDARHRDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTS 640
Query: 216 KICSLLKGKFEELSLLRCGSHLVEK 240
I L+G F +LS+ + S++VE+
Sbjct: 641 GIFKRLEGHFSDLSIQKYSSNVVER 665
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 671 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 727
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 728 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 787
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 788 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 847
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 848 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 902
>gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]
Length = 692
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 402 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PPDQQV 455
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A + L+TH GC
Sbjct: 456 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRV 515
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 516 IQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 575
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 576 LVLSQDKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 635
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 636 DVAEPAQ 642
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 730
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 731 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 790
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 791 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 850
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 851 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 905
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 784
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 785 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 844
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 845 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 904
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 905 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 964
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 965 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1015
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VIS R + + + V+ KC+E +
Sbjct: 911 YGC---RVIQKALEFI---PSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPH 964
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 965 ALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 1024
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------------------- 240
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1025 VIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTERAMLIDEVCGL 1084
Query: 241 YQRP--SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ P +++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1085 TEGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1120
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 899 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 952
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 953 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1012
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1013 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1072
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1073 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1132
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1133 DVAEPGQ 1139
>gi|227430386|ref|NP_001153077.1| pumilio homolog 1 isoform 4 [Mus musculus]
gi|74145600|dbj|BAE36209.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 802 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 855
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 856 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 915
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 916 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 975
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 976 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1035
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1036 DVAEPGQ 1042
>gi|348571014|ref|XP_003471291.1| PREDICTED: pumilio homolog 1-like isoform 2 [Cavia porcellus]
Length = 1092
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 802 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 855
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 856 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 915
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 916 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 975
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 976 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1035
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1036 DVAEPGQ 1042
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 727 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 783
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 784 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 843
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 844 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 903
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 904 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 963
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 964 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1014
>gi|449493600|ref|XP_004159369.1| PREDICTED: uncharacterized LOC101212397 [Cucumis sativus]
Length = 746
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 44/265 (16%)
Query: 17 ANLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKY 76
AN T I P K L + I L+ K + G FLQ+M S IF + +
Sbjct: 404 ANRKTEIPPL---KCNSLDEATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHH 460
Query: 77 PFDLMTDGYGCHL-----------------------------------ARSMQKLIKLLV 101
+LM D +G +L R++QKLI+ L
Sbjct: 461 VSELMVDPFGNYLIQKLLGVCDEDQRLQILYKINRPGELIRISCNMHGTRAVQKLIETLK 520
Query: 102 GSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETL-DEQKNEVLYLAAMNHFRELATHV 160
SL++S +M + + V CL+ L + + L+ AA E+AT
Sbjct: 521 TPEQFSLIVSLLKTGIVILMKNVNGNHVAQHCLQYLMPDYIGKFLFDAATKSCVEVATDR 580
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK-----YSE 215
GC L + R LL + +A LS+D GNYVVQ L L +
Sbjct: 581 HGCCVLQKCLAVSDARHRDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTS 640
Query: 216 KICSLLKGKFEELSLLRCGSHLVEK 240
I L+G F +LS+ + S++VE+
Sbjct: 641 GIFKRLEGHFSDLSIQKYSSNVVER 665
>gi|145538858|ref|XP_001455129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422917|emb|CAK87732.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D++LL K + G+ +QK++ + IFE + + ++ D +GC R +QKL++
Sbjct: 162 DLLLLSKHKFGNYVIQKIIENCNQNTRTLIFEQLNSHVLEMSQDKFGC---RVVQKLLEF 218
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
++ + L+ K ++F + + VI K ++ + + E + N+ ++ +H
Sbjct: 219 ILNQQKVQLISQIKPYALK-LIFDQCGNHVIQKIIDLVTD--AEFIIDLVTNNVDKVVSH 275
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC + + L + E LS GNY+VQH++ G K E I
Sbjct: 276 PYGCRIAQKCLEIFPNDKLQELYISLIPLCERLSFCQYGNYIVQHMMNSGPPKGFEVIGK 335
Query: 220 LLKGKFEELSLLRCGSHLVEKY 241
+K + E+S + GS++ E+Y
Sbjct: 336 FIKSRIIEVSQDKYGSNVAERY 357
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 784
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 785 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 844
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 845 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 904
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 905 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 964
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 965 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1015
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 709
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 710 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 769
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 770 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 829
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 830 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 889
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 890 SRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 940
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 729 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 785
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 786 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 845
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 846 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 905
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 906 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 965
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 966 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1016
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 730
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 731 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 790
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 791 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 850
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 851 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 905
>gi|385304539|gb|EIF48553.1| protein of the mitochondrial outer surface [Dekkera bruxellensis
AWRI1499]
Length = 419
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 32/229 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-----QKLIK 98
K + GS F+Q+ L+ + IF + Y DLMTD +G ++ + + IK
Sbjct: 93 FSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKYFEYGNETQIK 152
Query: 99 LLVGS----------------------PCISL-----VISAAYRRFKDMMFSKEASSVII 131
+L S +SL V+ +++ + + VI
Sbjct: 153 ILFESMKGNFNFLSMQMYGCRVVQKCMDSVSLDDRLQVVDELKPNILNLVKDQNGNHVIQ 212
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
K +E++ + + + + L+TH GC + + R +L + +
Sbjct: 213 KVIESIPTSRTPFILESLKHQIYHLSTHPYGCRVIQRLLEYSDEEDRAYILGELKGFIYY 272
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +D GNYV+QH++ G +Y+E+I ++ LS + S+ VEK
Sbjct: 273 LVQDQFGNYVIQHIIEHGSEQYTEQILQIVIDNLVNLSKHKFASNAVEK 321
>gi|354472361|ref|XP_003498408.1| PREDICTED: pumilio homolog 1 isoform 2 [Cricetulus griseus]
Length = 1091
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 801 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 854
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 855 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 914
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 915 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 974
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 975 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1034
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1035 DVAEPGQ 1041
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 648 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 704
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 705 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 764
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 765 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 824
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 825 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 884
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 885 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 935
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 707
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 708 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 767
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 768 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 827
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 828 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 887
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 888 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 938
>gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]
Length = 576
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 286 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PPDQQV 339
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A + L+TH GC
Sbjct: 340 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRV 399
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 400 IQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 459
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 460 LVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 519
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 520 DVAEPAQ 526
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 898 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 951
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 952 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1011
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1012 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1071
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1072 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1131
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1132 DVAEPGQ 1138
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 730
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 731 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 790
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 791 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 850
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 851 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 905
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 707
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 708 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 767
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 768 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 827
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 828 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 887
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 888 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 938
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 786
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 787 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 846
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 847 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 906
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 907 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 966
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 967 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1017
>gi|407406573|gb|EKF30846.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi
marinkellei]
Length = 565
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 58/282 (20%)
Query: 44 LGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL- 100
+ K + G FLQ++L G D I + + +LMTD Y L +QKL ++
Sbjct: 203 IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEIVPHVAELMTDQYANFL---IQKLFDMMP 259
Query: 101 ---------VGSPCI--------------SLVISAAYRRFKDMM---FSKE--------- 125
V +P I +V + A R D++ SK+
Sbjct: 260 QDVRYKVARVAAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAH 319
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K L+ E +Y A + +A + +GC L + +R L++ I
Sbjct: 320 GNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASSSQRATLVNQI 379
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+++DP GNYV+Q+VL D K ++ I +L + + S+++EK R +
Sbjct: 380 LRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGA 439
Query: 246 --------IFTPC---------QHKYGNFVIQQALRVTKGFQ 270
+ T C Q +GN+V+Q AL + Q
Sbjct: 440 SQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTICSSAQ 481
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 734 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 790
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 791 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 850
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 851 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 910
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 911 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 970
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 971 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1021
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 899 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 952
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 953 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1012
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1013 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1072
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1073 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1132
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1133 DVAEPGQ 1139
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 899 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 952
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 953 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1012
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1013 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1072
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1073 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1132
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1133 DVAEPGQ 1139
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 726 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 782
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 783 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 842
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 843 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 902
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 903 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 962
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 963 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1013
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 784
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 785 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 844
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 845 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 904
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 905 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 964
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 965 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1015
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 786
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 787 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 846
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 847 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 906
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 907 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 966
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 967 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1017
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 733 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 789
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 790 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 849
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 850 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 909
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 910 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 969
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 970 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1020
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 677 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 733
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 734 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 793
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 794 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 853
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 854 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 908
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 675 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 731
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 732 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 791
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 792 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 851
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 852 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 906
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 732
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 733 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 792
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 793 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 852
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 853 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 907
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 732
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 733 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 792
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 793 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 852
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 853 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 907
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 787
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 788 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 847
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 848 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 907
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 908 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 967
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 968 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1018
>gi|237831871|ref|XP_002365233.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211962897|gb|EEA98092.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
Length = 1618
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISA--AYRRFKDMMFSKE--ASSVIIKCLETLDEQKNE 143
H R++QKLI++ G P S + A R ++ +K+ A+ V+ K L + + +
Sbjct: 1194 HGTRAVQKLIEVCAGLPAGSAATNELLAALRPSVVLLAKDVNANHVVQKILSSFPASRCD 1253
Query: 144 VLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQ 203
++ + E++T GC + I+ + +L I+++A L +D GNYVVQ
Sbjct: 1254 FVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIAANALELMQDAFGNYVVQ 1313
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHK---------- 253
VL L ++ + ++G ELS+ + S++VEK + TP Q
Sbjct: 1314 CVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCL--VLGTPEQRNLIVDELLAEG 1371
Query: 254 ----------YGNFVIQQALRVT 266
Y N+VIQ+AL V+
Sbjct: 1372 DGLKDLLLDSYANYVIQRALTVS 1394
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 33/241 (13%)
Query: 26 GTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGY 85
G+ N LLA +VLL K + +QK+LS ++ +F V K ++ T+ +
Sbjct: 1212 GSAATNELLAALRPSVVLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERH 1271
Query: 86 GCHLARSMQKLIKLL---VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD-EQK 141
GC + MQ+ I S + + + A +D + +++C+ L E
Sbjct: 1272 GCCV---MQRCIDAAPPRAKSEILQEIAANALELMQDAF-----GNYVVQCVLDLQIEGF 1323
Query: 142 NEVLYLAAMNHFRELATH------VRGCVSL-----NNFINEMRGPRRGGLLDLISSHAE 190
N + A H REL+ V C+ L N I + GL DL+
Sbjct: 1324 NGAVAGAIRGHIRELSMQKFSSNVVEKCLVLGTPEQRNLIVDELLAEGDGLKDLL----- 1378
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR--PSIFT 248
D NYV+Q L + +++ ++ +L + GS + K + P+I
Sbjct: 1379 ---LDSYANYVIQRALTVSSPAAQQQLLLAIQPCLSQLRQTQPGSRVAHKLVKKFPNILA 1435
Query: 249 P 249
P
Sbjct: 1436 P 1436
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 895 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PPDQQV 948
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A + L+TH GC
Sbjct: 949 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRV 1008
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1009 IQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1068
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1069 LVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1128
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1129 DVAEPAQ 1135
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 707
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 708 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 767
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 768 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 827
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 828 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 887
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 888 SRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 938
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYV---IQKFFEFG 709
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 710 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 769
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 770 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 829
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 830 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 889
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 890 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 940
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 899 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 952
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 953 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1012
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1013 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1072
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1073 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1132
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1133 DVAEPGQ 1139
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 787
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 788 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 847
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 848 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 907
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 908 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 967
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 968 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1018
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 654 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 710
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 711 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 770
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 771 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 830
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 831 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 890
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 891 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 941
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 709
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 710 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 769
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 770 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 829
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 830 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 889
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 890 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 940
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 786
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 787 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 846
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 847 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 906
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 907 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 966
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 967 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1017
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 708
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 709 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 768
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 769 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 828
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 829 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 888
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 889 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 939
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 727 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 783
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 784 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 843
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 844 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 903
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 904 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 963
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 964 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1014
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|349605218|gb|AEQ00529.1| Pumilio-like protein 1-like protein, partial [Equus caballus]
Length = 281
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 32/226 (14%)
Query: 71 EAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
E + + L YGC R +QK ++ + P VI+ R + +
Sbjct: 12 ERIRGHVLSLALQMYGC---RVIQKALEFI---PADQQVINEMVRELDGHVLKCVKDQNG 65
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 66 NHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELH 125
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 126 QHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHAS 185
Query: 242 -----------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 186 RTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 231
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 786
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 787 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 846
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 847 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 906
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 907 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 966
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 967 SRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1017
>gi|297826303|ref|XP_002881034.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
gi|297326873|gb|EFH57293.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+F+ V P L YGC R +QK I+++ I +V
Sbjct: 688 FFEHGLPPQRRELAEKLFDNVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 740
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + H L+TH GC +
Sbjct: 741 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRV 796
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I S L++D GNYVVQHVL G I L GK ++
Sbjct: 797 LEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQM 856
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 857 SQQKFASNVVEK 868
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 707
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 708 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 767
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 768 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 827
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 828 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 887
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 888 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 938
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 732
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 733 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 792
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 793 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 852
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 853 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 907
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 900 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PPDQQV 953
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A + L+TH GC
Sbjct: 954 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRV 1013
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1014 IQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1073
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1074 LVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1133
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1134 DVAEPAQ 1140
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 723 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 779
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 780 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 839
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 840 GNHVVQKCIECVQPQSLQFIIDAFKAQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 899
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 900 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEK 954
>gi|326433440|gb|EGD79010.1| hypothetical protein PTSG_11819 [Salpingoeca sp. ATCC 50818]
Length = 903
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 30/251 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L D T+ + I + L YGC R +Q+++ + + ++V
Sbjct: 623 GNYVIQKLLQYGDGTVQHAIVNGMRGRVPALSMHNYGC---RVVQEVLATVTSAELRNIV 679
Query: 110 ISA--AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN 167
+ AY D++ + A+ VI KC+ +L + A ++ H+ GC +
Sbjct: 680 LKELEAYN-VSDLIMDQHANHVIQKCVTSLSPDNLGFVISACERQASAMSRHLYGCRVIQ 738
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
I + + + + L K+ GNYV+QHVL G ++ + + + G
Sbjct: 739 RLIEQCESTQLALVYKNVLDDCASLMKNAYGNYVIQHVLEHGKQEHRDVVMDCVSGNLLT 798
Query: 228 LSLLRCGSHLVEKYQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQSSFI- 286
LS QHK+ + VI++ LRV + Q++ +++ EL +S+ +
Sbjct: 799 LS---------------------QHKFASNVIEKFLRVARADQIS--SLVAELCRSTALP 835
Query: 287 QGIVPFNFHVV 297
G H++
Sbjct: 836 DGTTAAPLHIM 846
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 787
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 788 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 847
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 848 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 907
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 908 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 967
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 968 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1018
>gi|161138166|gb|ABX58015.1| pumilio-like protein 1 [Mesocestoides corti]
gi|161138168|gb|ABX58016.1| pumilio-like protein 1 [Mesocestoides corti]
Length = 160
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + + + + A H ++TH GC + + + +L +
Sbjct: 3 VVQKCIEYVPSEHLQFIVDAFKGHVHSISTHSYGCRVIQRILEHCSADQTAPILAELHQC 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
AE L KD GNYV+QH+L G + +I LL+G+ LS+ + S++VEK
Sbjct: 63 AESLFKDQYGNYVIQHILEHGRTEEKSRIIGLLRGRVAALSVHKFASNVVEK 114
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 57/287 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL- 99
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEFG 1172
Query: 100 ------LVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
+G V+ A + + + K S
Sbjct: 1173 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQN 1232
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 1233 GNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDEL 1292
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 1293 HEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHA 1352
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
+ ++ + +Y N+V+Q+ + V++ Q+ +
Sbjct: 1353 TRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKK 1399
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 57/287 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL- 99
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEFG 1172
Query: 100 ------LVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
+G V+ A + + + K S
Sbjct: 1173 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQN 1232
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 1233 GNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDEL 1292
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 1293 HEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHA 1352
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
+ ++ + +Y N+V+Q+ + V++ Q+ +
Sbjct: 1353 TRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKK 1399
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 57/287 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL- 99
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEFG 1172
Query: 100 ------LVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
+G V+ A + + + K S
Sbjct: 1173 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQN 1232
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 1233 GNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDEL 1292
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 1293 HEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHA 1352
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
+ ++ + +Y N+V+Q+ + V++ Q+ +
Sbjct: 1353 TRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKK 1399
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 922 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 975
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 976 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1035
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1036 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1095
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1096 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1155
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1156 DVAEPGQ 1162
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 788
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 789 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 848
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 849 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 908
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 909 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 968
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 969 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1019
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 937 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 990
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 991 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1050
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1051 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1110
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1111 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1142
>gi|158828184|gb|ABW81063.1| Mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+F+ V P L YGC R +QK I+++ I +V
Sbjct: 688 FFEHGLPPQRRELAEKLFDNVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 740
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + H L+TH GC +
Sbjct: 741 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRV 796
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I S L++D GNYVVQHVL G I L GK ++
Sbjct: 797 LEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQM 856
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 857 SQQKFASNVVEK 868
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L T +F + + + LMTD +G ++ +QK
Sbjct: 669 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 725
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 726 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 785
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 786 GNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEEL 845
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G KI + ++GK LS + S++VEK
Sbjct: 846 HQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEK 900
>gi|426221805|ref|XP_004005097.1| PREDICTED: pumilio homolog 1 isoform 2 [Ovis aries]
Length = 1038
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 783 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 836
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 837 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 896
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 897 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 956
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 957 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 988
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 786
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 787 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 846
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 847 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 906
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 907 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 966
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 967 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1017
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYV---IQKFFEFG 784
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 785 SLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 844
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 845 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 904
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 905 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 964
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 965 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1015
>gi|145542600|ref|XP_001456987.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424801|emb|CAK89590.1| unnamed protein product [Paramecium tetraurelia]
Length = 508
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 21/242 (8%)
Query: 7 RPDLNRGIGIANLSTSIGPGTYGKNALLA-----QPDYDIVLLGKTEG----------GS 51
PD+ I I++L S+ L P+ ++++ K E G+
Sbjct: 165 EPDIEADIYISSLIDSLWGNQIISRKLQKLIESGTPEQQLLIVQKLERISPQIEKDVFGN 224
Query: 52 LFLQKML-SGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI-SLV 109
+QK+ S D + ++F + + +DL + +GC R MQKLI+ G + + +
Sbjct: 225 YVVQKIFDSSGDVKLKSRMFNKLKTHFYDLSKNPFGC---RVMQKLIEYSQGKEEVQNSI 281
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+S + + +++ + VI K LE+ D+ K E L F +A + GC ++
Sbjct: 282 LSQLVQNMRSLIYDSNGNYVIFKMLESYDKSKMEFLIPIVEESFHYMAQQIYGCKIIHKI 341
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE-KICSLLKGKFEEL 228
I + L+ ++ LS+ GNY++QH+L + + ++ L+ +F +L
Sbjct: 342 IQQYAPNYIANLVKQSIANYSVLSQTEFGNYILQHILQFWIVSPEKTRLIQLVIQQFYQL 401
Query: 229 SL 230
S+
Sbjct: 402 SI 403
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 938 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 991
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 992 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1051
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1052 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1111
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1112 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1143
>gi|158828235|gb|ABW81112.1| putative pumilio Mpt5-2 [Boechera divaricarpa]
Length = 967
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+F+ V P L YGC R +QK I+++ I +V
Sbjct: 686 FFEHGLPPQRRELAEKLFDNVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 738
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + H L+TH GC +
Sbjct: 739 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRV 794
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I S L++D GNYVVQHVL G I L GK ++
Sbjct: 795 LEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQM 854
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 855 SQQKFASNVVEK 866
>gi|15227052|ref|NP_180483.1| pumilio 1 [Arabidopsis thaliana]
gi|75217076|sp|Q9ZW07.1|PUM1_ARATH RecName: Full=Pumilio homolog 1; Short=APUM-1; Short=AtPUM1
gi|3980412|gb|AAC95215.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253128|gb|AEC08222.1| pumilio 1 [Arabidopsis thaliana]
Length = 968
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+F+ V P L YGC R +QK I+++ I +V
Sbjct: 687 FFEHGLPPQRRELAEKLFDHVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 739
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + H L+TH GC +
Sbjct: 740 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRV 795
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I S L++D GNYVVQHVL G I L GK ++
Sbjct: 796 LEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQM 855
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 856 SQQKFASNVVEK 867
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 656 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 712
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 713 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 772
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 773 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 832
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 833 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 892
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 893 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 943
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYV---IQKFFEFG 787
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 788 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 847
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 848 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 907
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 908 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 967
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 968 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1018
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 969 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1022
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1023 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1082
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1174
>gi|407837279|gb|EKF99706.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 561
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 52/279 (18%)
Query: 44 LGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYG--------------- 86
+ K + G FLQ++L G D I V + +LMTD Y
Sbjct: 203 IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFDMMPQDV 262
Query: 87 -----CHLAR-------------SMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
C A+ S+QK+++ + + ++ A + ++ +
Sbjct: 263 RYKVACVAAQKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAHGNH 322
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI K L+ E +Y A + +A + +GC L + +R L++ I
Sbjct: 323 VIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRC 382
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS--- 245
+++DP GNYV+Q+VL D K ++ I +L + + S+++EK R +
Sbjct: 383 CLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGASQP 442
Query: 246 -----IFTPC---------QHKYGNFVIQQALRVTKGFQ 270
+ T C Q +GN+V+Q AL + Q
Sbjct: 443 VQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTICSSAQ 481
>gi|334329171|ref|XP_003341193.1| PREDICTED: pumilio homolog 1 isoform 2 [Monodelphis domestica]
Length = 1094
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 839 YGC---RVIQKALEFI---PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 892
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 893 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 952
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 953 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1012
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1013 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1044
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 969 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1022
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1023 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1082
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1174
>gi|61098182|ref|NP_001012858.1| pumilio homolog 1 [Gallus gallus]
gi|60098393|emb|CAH65027.1| hypothetical protein RCJMB04_1f11 [Gallus gallus]
Length = 1093
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 838 YGC---RVIQKALEFI---PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 891
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 892 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 951
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 952 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1011
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1012 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1043
>gi|147775244|emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Query: 73 VYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIK 132
+Y + L YGC R +QK I+++ I +V + + + + VI K
Sbjct: 777 LYGHVLTLSLQMYGC---RVIQKAIEVVDPDQKIKMVEELDGHIMR-CVRDQNGNHVIQK 832
Query: 133 CLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEF 191
C+E + E + + + L+TH GC + + R P+ + ++D I
Sbjct: 833 CIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSM 892
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G I L GK ++S + S++VEK
Sbjct: 893 LAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEK 941
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 928 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 981
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 982 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1041
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1042 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1101
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1102 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1161
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1162 DVAEPGQ 1168
>gi|395526794|ref|XP_003765541.1| PREDICTED: pumilio homolog 1 isoform 2 [Sarcophilus harrisii]
Length = 1094
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 839 YGC---RVIQKALEFI---PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 892
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 893 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 952
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 953 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1012
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1013 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1044
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 57/287 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL- 99
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEFG 1172
Query: 100 ------LVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
+G V+ A + + + K S
Sbjct: 1173 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQN 1232
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 1233 GNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDEL 1292
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 1293 HEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHA 1352
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
+ ++ + +Y N+V+Q+ + V++ Q+ +
Sbjct: 1353 TRGERTGLIDEVCTFNDNALHMMMKDQYANYVVQKMIDVSEPTQLKK 1399
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 801 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 854
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 855 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 914
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 915 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 974
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 975 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1034
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1035 DVAEPGQ 1041
>gi|327286699|ref|XP_003228067.1| PREDICTED: pumilio homolog 1-like isoform 2 [Anolis carolinensis]
Length = 1091
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 836 YGC---RVIQKALEFI---PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 889
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 890 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 949
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 950 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1009
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1010 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1041
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 708
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 709 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 768
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 769 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 828
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 829 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 888
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 889 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 939
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 636 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 692
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 693 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 752
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 753 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 812
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 813 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 872
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 873 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 923
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 735 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 791
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 792 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 851
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 852 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 911
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 912 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 971
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 972 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1022
>gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]
Length = 561
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 58/282 (20%)
Query: 44 LGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL- 100
+ K + G FLQ++L G D I V + +LMTD Y L +QKL ++
Sbjct: 203 IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFL---IQKLFDMMP 259
Query: 101 ---------VGSPCI--------------SLVISAAYRRFKDMM---FSKEA-------- 126
V +P I +V + A R D++ SK+
Sbjct: 260 QDVRYKVARVAAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAH 319
Query: 127 -SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K L+ E +Y A + +A + +GC L + +R L++ I
Sbjct: 320 GNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQI 379
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+++DP GNYV+Q+VL D K ++ I +L + + S+++EK R +
Sbjct: 380 LRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGA 439
Query: 246 --------IFTPC---------QHKYGNFVIQQALRVTKGFQ 270
+ T C Q +GN+V+Q AL + Q
Sbjct: 440 SQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTICSSAQ 481
>gi|297282793|ref|XP_001096525.2| PREDICTED: pumilio homolog 1 isoform 3 [Macaca mulatta]
gi|332808250|ref|XP_001157224.2| PREDICTED: pumilio homolog 1 isoform 4 [Pan troglodytes]
gi|397515863|ref|XP_003828161.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan paniscus]
gi|402853681|ref|XP_003891519.1| PREDICTED: pumilio homolog 1 isoform 2 [Papio anubis]
Length = 1044
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 789 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 842
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 843 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 902
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 903 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 962
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 963 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 994
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 60/291 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +T +F + ++LMTD +G ++ +QK +
Sbjct: 765 IVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYV---IQKFFEFG 821
Query: 101 VGSPCISL-------VISAAYRRFKDMMFSKEASS------------------------- 128
+L V+ A + + + K S
Sbjct: 822 TAEQKTTLAQKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQN 881
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + + L+TH GC + + + +L +
Sbjct: 882 GNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILAEL 941
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 942 HQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKCVTHA 1001
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ ++ + +Y N+V+Q+ + V+ + T+R ++
Sbjct: 1002 TRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVS---EPTQRKVL 1049
>gi|193788405|dbj|BAG53299.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 635 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PSDQQV 688
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A L+TH GC
Sbjct: 689 INEMVRELDGHVLKCVKDQNGNHVVQKCVECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 748
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 749 IQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 808
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 809 LVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 868
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 869 DVAEPGQ 875
>gi|225434877|ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Query: 73 VYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIK 132
+Y + L YGC R +QK I+++ I +V + + + + VI K
Sbjct: 803 LYGHVLTLSLQMYGC---RVIQKAIEVVDPDQKIKMVEELDGHIMR-CVRDQNGNHVIQK 858
Query: 133 CLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEF 191
C+E + E + + + L+TH GC + + R P+ + ++D I
Sbjct: 859 CIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSM 918
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G I L GK ++S + S++VEK
Sbjct: 919 LAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEK 967
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 647 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 703
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 704 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 763
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 764 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 823
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 824 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 883
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 884 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 934
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 938 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 991
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 992 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1051
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1052 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1111
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1112 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1143
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 933 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 986
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 987 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1046
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1047 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1106
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1107 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1138
>gi|403293272|ref|XP_003937644.1| PREDICTED: pumilio homolog 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1044
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 789 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 842
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 843 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 902
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 903 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 962
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 963 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 994
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 930 YGC---RVIQKALEFI---PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 983
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 984 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 1043
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1044 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1103
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1104 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1135
>gi|296207290|ref|XP_002750600.1| PREDICTED: pumilio homolog 1 isoform 4 [Callithrix jacchus]
Length = 1044
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 789 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 842
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 843 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 902
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 903 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 962
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 963 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 994
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L T +F + + + LMTD +G ++ +QK
Sbjct: 749 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 805
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 806 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 865
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 866 GNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEEL 925
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYV+QHVL G KI + ++GK LS + S++VEK
Sbjct: 926 HQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEK 980
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 907 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 960
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 961 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1020
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1021 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1080
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1081 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1112
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 933 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 986
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 987 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1046
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1047 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1106
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1107 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1138
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 934 YGC---RVIQKALEFI---PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 987
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 988 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNY 1047
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1107
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1139
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + P V
Sbjct: 914 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFI---PPDQQV 967
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
I+ R + + + V+ KC+E + Q + + A + L+TH GC
Sbjct: 968 INDMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRV 1027
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + +L+ + H E L +D GNYV+QHVL G + KI + ++G
Sbjct: 1028 IQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNV 1087
Query: 226 EELSLLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQAL 263
LS + S++VEK +++T + +Y N+V+Q+ +
Sbjct: 1088 LVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI 1147
Query: 264 RVTKGFQ 270
V + Q
Sbjct: 1148 DVAEPAQ 1154
>gi|297809043|ref|XP_002872405.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
gi|297318242|gb|EFH48664.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 23/238 (9%)
Query: 49 GGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G +F + M D IT ++ + V + P + H R++Q L++ L I+
Sbjct: 167 GHRVFEKLMEKCTDEQIT-RVLDIVLQQPLQFVRLCVDSHGTRAIQDLMRSLCSVEQIAR 225
Query: 109 VISAAYRRFKDMMFSKEASS--VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
++ ++ +K+A++ VI+ C + L + + ++A G L
Sbjct: 226 FMATLCH--VALLLTKDANANLVILFCFNHFSPSHSRYLLEVIVQNCYQVAIDQHGYCML 283
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
N I + R L+ I ++ L K+ GNYVVQ+VL L D + + + L G +
Sbjct: 284 NQCIRQSSRELRDPLIKEIITNVVRLCKNCYGNYVVQYVLDLEDCEVTSALSKHLDGNYV 343
Query: 227 ELSLLRCGSHLVEKYQRPSIFTPCQHK----------------YGNFVIQQALRVTKG 268
+LS + GSH+V+K F C + +GN+VIQ A V++
Sbjct: 344 QLSYDKYGSHVVQKCLENREF--CSRRIIAELLSDIDSLLVDPFGNYVIQTAWIVSED 399
>gi|194390836|dbj|BAG62177.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 789 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 842
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 843 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 902
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 903 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 962
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 963 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 994
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 969 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1022
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1023 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1082
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1174
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 934 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 987
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 988 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1047
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1107
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1139
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 969 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1022
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1023 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1082
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1174
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 954 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1007
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1008 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPVLEELHQHTEQLVQDQYGNY 1067
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1068 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1127
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1128 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 1159
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 787
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 788 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 847
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 848 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 907
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 908 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 967
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 968 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1018
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 969 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1022
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1023 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1082
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1174
>gi|297790299|ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
gi|297308854|gb|EFH39308.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + V+ KC+E + E+
Sbjct: 250 YGC---RVIQKAIEVVDLDQKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEEN 302
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNY 200
E + H L+TH GC + + P + +++ I S L++D GNY
Sbjct: 303 IEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNY 362
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 363 VVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEK 402
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 907 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 960
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 961 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1020
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1021 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1080
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1081 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1112
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 969 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 1022
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 1023 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1082
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1174
>gi|123454731|ref|XP_001315116.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121897783|gb|EAY02893.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 410
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 114/313 (36%), Gaps = 68/313 (21%)
Query: 25 PGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDG 84
PGT + +Q V + K + LQ+ + IF +Y + DL+ DG
Sbjct: 75 PGTVVGSPFYSQQSSQYVKMAKDRQDCIMLQEQIDHATPAERDTIFNVLYPHMGDLVCDG 134
Query: 85 YGCHL---------------------------------ARSMQKLIKLLVGSPCISLVIS 111
L R +QK I+ I +
Sbjct: 135 AANFLIQKLCEYLNEEQQTRMLAFFMEDVQRIVDHPNGCRVLQKFIESTTSPSNIDPIFL 194
Query: 112 AAYRRFKDMMFSKE----ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN 167
A RF ++ S+ A IIK + + + N++ H +L GC +
Sbjct: 195 ALLPRFVELCSSQNGNHIAQRFIIKIPQRVPDIINKI-----KTHVYDLVVDNWGCRVIQ 249
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
+ + L+D + AE L+ + GNYVVQ++L G ++ + + G F E
Sbjct: 250 QLFDRLPIQELIPLVDEVLCRAETLATNQFGNYVVQNILNSGTPEHIQALIDAFTGHFYE 309
Query: 228 LSLLRCGSHLVEK-----------------------YQRPSIFTPCQHKYGNFVIQQALR 264
S+ + S+++EK Y RP I ++GN+VIQ R
Sbjct: 310 FSMHKFASNVIEKCIRKANPQQQNMIFTEIIGPEGNYNRPRIKEMVSDQFGNYVIQ---R 366
Query: 265 VTKGFQMTERNII 277
+ + +++NII
Sbjct: 367 IIEFGTESQQNII 379
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLETLDEQ 140
YGC R +QK ++ + P VI+ R + + + V+ KC+E + Q
Sbjct: 920 YGC---RVIQKALEFI---PSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 973
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+ + A L+TH GC + + + +L+ + H E L +D GNY
Sbjct: 974 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 1033
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------- 241
V+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1034 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1093
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1094 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 1125
>gi|291238122|ref|XP_002738980.1| PREDICTED: pumilio homolog 2-like [Saccoglossus kowalevskii]
Length = 643
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 56/285 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L T +F + ++LMTD +G ++
Sbjct: 311 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKFFEFGTPD 370
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ + + +V K + + +
Sbjct: 371 QKMALAQRVRGHVLPLALQMYGCRVIQKALESIPPDQQVDIVKELDGHVLK-CVKDQNGN 429
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E ++ + + A L+TH GC + + + +L+ +
Sbjct: 430 HVVQKCIECVEPVALQFIIDAFRGQIFVLSTHPYGCRVIQRILEHCTVDQTIPILEELHD 489
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----YQR 243
+ E L +D GNYV+QHVL G + KI + L+GK LS + S++VEK R
Sbjct: 490 NTERLVQDQYGNYVIQHVLEHGRPEDKSKIVAELRGKVLVLSQHKFASNVVEKCVTHASR 549
Query: 244 P------------------SIFTPCQHKYGNFVIQQALRVTKGFQ 270
P +++T + +Y N+V+Q+ + V++ Q
Sbjct: 550 PERALLIDEVISYNDGPHSALYTMMKDQYANYVVQKMIDVSEPGQ 594
>gi|403357293|gb|EJY78273.1| Pumilio [Oxytricha trifallax]
Length = 1120
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QKML + +++ + L D YGC R +QK ++++ L
Sbjct: 707 GNYVIQKMLEYGNQNQRTMLYQQIKGNMIPLSQDQYGC---RVVQKALEVVTTQQQDDL- 762
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I + + + + VI K +E + +K + + A E++ H GC +
Sbjct: 763 IGEIRPQVQLCVEDPNGNHVIQKIIEQVSSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRM 822
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + + +L + L+KD GNYV+ HVL G KY + + +K + +LS
Sbjct: 823 LEHCKEDQIKPILVEVFERVLDLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLS 882
Query: 230 LLRCGSHLVEK---------------------------YQRPS----IFTPCQHKYGNFV 258
+ + GS+++EK YQ S + + KYGNFV
Sbjct: 883 IHKFGSNVIEKCLQHSDQKQKDDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFV 942
Query: 259 IQQALRVTKGFQ 270
IQ+ L ++ Q
Sbjct: 943 IQRVLDISNENQ 954
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 115/294 (39%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 847 IVEFSRDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYV---IQKFFEFG 903
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 904 SIDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQN 963
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 964 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEEL 1023
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---- 241
H E L +D GNYV+QHVL G + KI + ++GK LS + S++VEK
Sbjct: 1024 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKCVTHA 1083
Query: 242 ------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 1084 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1134
>gi|354543476|emb|CCE40195.1| hypothetical protein CPAR2_102330 [Candida parapsilosis]
Length = 860
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 88 HLARSMQKLIKLLVGS-----------PCISLVISAAYRRFKDMMFSKEASSVIIKCLET 136
H R++QKLI+ + S SL+I + + + V+ KCL
Sbjct: 607 HGTRALQKLIECVGASHDNQEEVVDENDSASLIIKSLEPSIVLLSRDLNGNHVVQKCLIN 666
Query: 137 LDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
L + N+V+Y ++ +A H GC + ++ + L +++ + DP
Sbjct: 667 LSNKVNQVIYDTITSNCEVVACHRHGCCVIQRCLDYGNDRQVETLSHEVTTKLGVFTTDP 726
Query: 197 SGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
GNYVVQ+VL GD + + I + L+ F +LS+ + GS+++EK R
Sbjct: 727 YGNYVVQYVLSHGDSQSIDTIFAYLRDHFYQLSIHKFGSNVLEKSLR 773
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 32/232 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L T +F + + + LMTD +G ++ +
Sbjct: 669 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 728
Query: 94 QKL-IKLLVGSPCISLVI-------------SAAYRRFKDM-----------MFSKEASS 128
QKL + + + L + S + + DM + + +
Sbjct: 729 QKLSLTTRIRGHVLPLALQMYGCRVIQKALESISPDQQNDMVKELDGHVLKCVKDQNGNH 788
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q + + A L+TH GC + + + +L+ + H
Sbjct: 789 VVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLPVLEELHQH 848
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L +D GNYV+QHVL G KI S ++GK LS + S++VEK
Sbjct: 849 TEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEK 900
>gi|258571557|ref|XP_002544582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904852|gb|EEP79253.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1139
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 37/264 (14%)
Query: 18 NLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYP 77
N T +G + N L Q ++ L K + G +LQ+ L + IF + +
Sbjct: 752 NGETEVGAFSRFANVPLEQYRDELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHMHV 811
Query: 78 FDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETL 137
+LMTD +G +L QKL++ +L+ +AA + + ++ + + K +E +
Sbjct: 812 VELMTDPFGNYLC---QKLLEFSNDEQRTALINNAA-PQLVSIALNQHGTRALQKMIEFI 867
Query: 138 DE-QKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
++ + + A EL + G + +N + S A+ ++DP
Sbjct: 868 STPEQTQTVINALRGKVVELVQDLNGNHVIQKCLNRL-------------SVAD--AQDP 912
Query: 197 SGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFT-------- 248
GNYVVQ++L L + ++E +C GK LS + S+++EK R + F
Sbjct: 913 FGNYVVQYILDLAEPHFTEPLCQTFVGKVSMLSKQKFSSNVIEKCPRTAEFQSRRLLIQE 972
Query: 249 --PCQH-------KYGNFVIQQAL 263
P Q + N+V+Q A+
Sbjct: 973 MLPAQELERMLRDSFANYVVQTAM 996
>gi|228312515|pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
gi|228312516|pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 111/285 (38%), Gaps = 57/285 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK
Sbjct: 28 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEFG 84
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
K +G V+ A + + + K S
Sbjct: 85 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQN 144
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 145 GNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDEL 204
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 205 HEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHA 264
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 265 TRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 309
>gi|145488749|ref|XP_001430378.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397475|emb|CAK62980.1| unnamed protein product [Paramecium tetraurelia]
Length = 452
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D+ LL K + G+ +QK++ + I IFE ++ + ++ D +GC R +Q+L++
Sbjct: 175 DLPLLSKHKFGNYVIQKIIENSNQNIRTLIFEQLHPFIIEMCYDKFGC---RVIQRLLEF 231
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+ I L+ S + +++F + + VI K ++ + E + N+ + +H
Sbjct: 232 IQNHQKIQLIQSIKSQVL-NLIFDQCGNHVIQKIIDLASD--AEFIIDIVTNNVDHIVSH 288
Query: 160 VRGC----VSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE 215
GC L F N+ L+ L E LS GNY+VQH++ G K E
Sbjct: 289 SYGCRIAQKCLEIFPNQKLQQLYVSLIPL----CERLSFCQYGNYIVQHMINQGPPKGLE 344
Query: 216 KICSLLKGKFEELSLLRCGSHLVEKY 241
I +K + E+S + S + +KY
Sbjct: 345 VIGKYIKARIVEVSQDKYASIVAQKY 370
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 32/232 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L T +F + + + LMTD +G ++ +
Sbjct: 749 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 808
Query: 94 QKL-IKLLVGSPCISLVI-------------SAAYRRFKDM-----------MFSKEASS 128
QKL + + + L + S + + DM + + +
Sbjct: 809 QKLSLTTRIRGHVLPLALQMYGCRVIQKALESISPDQQNDMVKELDGHVLKCVKDQNGNH 868
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q + + A L+TH GC + + + +L+ + H
Sbjct: 869 VVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLPVLEELHQH 928
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L +D GNYV+QHVL G KI S ++GK LS + S++VEK
Sbjct: 929 TEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEK 980
>gi|145517871|ref|XP_001444813.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412246|emb|CAK77416.1| unnamed protein product [Paramecium tetraurelia]
Length = 536
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG-SPCISL 108
G+ +QK+ + + ++F + + +DL + +GC R MQKLI+ +
Sbjct: 268 GNYVVQKIFECTNQKLQLRMFNKLKSHFYDLSKNNFGC---RVMQKLIEYTYNREDLQLI 324
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
V+ + +++ + VI K LET D+ K E L F + + GC ++
Sbjct: 325 VLQQLQSNMRSLIYDLNGNYVIFKMLETYDKLKMEFLIPIVEESFNYMGQQIYGCKIIHK 384
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK---ICSLLKGKF 225
I + + ++ L + LS+ GNYV+QH+L K S++ + L+ +F
Sbjct: 385 VIQQYTPQQISRIIRLSVQNYSILSQTEYGNYVLQHILQYW--KPSQEKGYLVQLVIQQF 442
Query: 226 EELSLLRCGSHLVEK 240
+LS+ + S+ VE+
Sbjct: 443 YQLSVNKYASNTVER 457
>gi|358391961|gb|EHK41365.1| hypothetical protein TRIATDRAFT_147678 [Trichoderma atroviride IMI
206040]
Length = 415
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 110/273 (40%), Gaps = 54/273 (19%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARS--------MQKLIKLLV 101
GS F+Q+ L +S +IF + LM D +G ++ + +K++ +
Sbjct: 38 GSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYGSQLQKKILAEKM 97
Query: 102 GSPCISLVISA-----AYRRFKDMMFSKEA-------------------SSVIIKCLETL 137
+ L + + + ++ ++A + V+ K +E +
Sbjct: 98 KGKVVDLSVQVYACRVVQKALEHILVEQQAELTRELEPEILRVIKDQNGNHVVQKIIELV 157
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
Q + + A LA+H GC + + + ++ + + A+ L D
Sbjct: 158 PRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMGELHASAQILITDQY 217
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIF--- 247
GNYV QHV+ G+L+ E+I L+ G+ LS + S++VEK QR +I
Sbjct: 218 GNYVAQHVIQNGELEDRERIIQLVMGQLLTLSKHKFASNVVEKCIEFGTPAQRTTIREQL 277
Query: 248 --------TPCQH----KYGNFVIQQALRVTKG 268
P Q ++GN+VIQ+ L +G
Sbjct: 278 TTAGPDGNNPLQQMMRDQFGNYVIQKMLGQLQG 310
>gi|261331948|emb|CBH14941.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 585
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 58/286 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI 97
++ L K + G FLQ++L D I I + + +LMTD Y L +QKL
Sbjct: 224 NVYELAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFL---VQKLF 280
Query: 98 KLL----------VGSPCISLVISAAYRRF------------KDMMFSKEASS------- 128
++ V +P I+ + + F ++++ +EA S
Sbjct: 281 DIMPKDVRYNVACVAAPKIAAIALTPHGTFSVQKMIETISSREELVIIREALSKDVVRLV 340
Query: 129 -------VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGL 181
I K L+ + E +Y A +A + +GC L + +R L
Sbjct: 341 KDANGNHAIQKVLQRFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQRSTL 400
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK- 240
+ I +++DP GNYV+Q+V+ GD K + I +L + + S+++EK
Sbjct: 401 VRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKFSSNVMEKV 460
Query: 241 -------YQRPSIFTPC---------QHKYGNFVIQQALRVTKGFQ 270
Q + T C Q +GN+V+Q AL + Q
Sbjct: 461 LCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTICTAGQ 506
>gi|443921904|gb|ELU41432.1| pumilio-family RNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1002
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 23/241 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLV----GSPC 105
G+ QK+L I E+V DL+ H R++QK+I L +P
Sbjct: 600 GNYLCQKLLEYSTDEQRNMICESVA---HDLVGISLNMHGTRAVQKMIDFLSTQRQANPS 656
Query: 106 -----ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
I +I A ++ + VI KCL L + N+ +Y A H E+ATH
Sbjct: 657 SYDAQIHSIIMALSMHVVTLIKDLNGNHVIQKCLNRLIPEDNQFIYNAVAAHCVEVATHR 716
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDL--KYSEKIC 218
GC L I+ +R L+ I+ +A L +DP GNYV H + ++ +C
Sbjct: 717 HGCCVLQRCIDHASDSQRIQLVTEITFNALTLVQDPYGNYVSCHTSRTDAVIRQFIGNVC 776
Query: 219 SLLKGKFEELSLLRC---GSHLVEKY------QRPSIFTPCQHKYGNFVIQQALRVTKGF 269
+L KF + +C H K R + + +GN+ +Q AL +
Sbjct: 777 ALSVQKFSSNVIEKCIRVAEHNTRKMLIEELLNRNRLEKLLRDSFGNYCVQTALDYAEPT 836
Query: 270 Q 270
Q
Sbjct: 837 Q 837
>gi|242781200|ref|XP_002479753.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719900|gb|EED19319.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 943
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 119/294 (40%), Gaps = 63/294 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H +S
Sbjct: 521 IVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 580
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
++++ + + ++L V+ A + KE ++KC+ D+
Sbjct: 581 QKRILANQMKTHILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQHVMKCVR--DQNG 638
Query: 142 NEVLYLA----AMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A H R +LATH GC + + P R +L +
Sbjct: 639 NHVIQKAIERVPTQHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETPDRESILAELH 698
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLK-YSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
E L D GNYV+QHV+ G+ K S I S++K S + S++VEK
Sbjct: 699 VCTELLIPDQFGNYVIQHVIENGEEKDRSVMIKSVIK-NVHNFSKHKFASNVVEKSIEFG 757
Query: 241 --YQRPSIF-----------TP----CQHKYGNFVIQQALRVTKGFQMTERNII 277
QR I +P + +YGN+VIQ+ L KG +ER +I
Sbjct: 758 EESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKG---SEREMI 808
>gi|440638601|gb|ELR08520.1| hypothetical protein GMDG_03219 [Geomyces destructans 20631-21]
Length = 976
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 69/307 (22%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
+V + GS F+Q L +S +IF + LMTD +G ++ + +
Sbjct: 552 VVEFSGDQHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVIQKLFEHGNQI 611
Query: 94 -QKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+K++ ++ + I L V+ A + +E + ++KC++ D+
Sbjct: 612 QKKILAEIMKNHVIELSLQMYGCRVVQKALEHVLADQQAELVRELQADVLKCVK--DQNG 669
Query: 142 NEVLYLA-----------AMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A ++ FR LATH GC + + P + +L +
Sbjct: 670 NHVIQKAIERCPTEQVQFILDAFRTQVHTLATHPYGCRVIQRMLEYCTPPDQTSVLKELF 729
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ A+ L D GNYVVQHV+ G + K+ S++ + LS + S++VE+
Sbjct: 730 ACAQMLIVDQYGNYVVQHVIQHGKPEDQAKLISMVTNQVLTLSKHKFASNVVERSISCGT 789
Query: 242 --QRPSIF-----------TPCQ----HKYGNFVIQQALRVTKGFQMTERNIIQELGQSS 284
QR +I +P Q +YGN+VIQ+ L + +G ER+ +
Sbjct: 790 TEQRQTIVAKIVALESDGSSPLQLMMKDQYGNYVIQKLLGLLQG---DERD--------A 838
Query: 285 FIQGIVP 291
F++ I P
Sbjct: 839 FVEDIKP 845
>gi|302855378|ref|XP_002959184.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
gi|300255440|gb|EFJ39746.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
Length = 409
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK L +I A+ L +GC R+MQK +++ + +V
Sbjct: 126 GNYVVQKFLEHGTPEHRARIANAIQGNVLSLSLQLFGC---RTMQKALEVFTEDQQVDIV 182
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
S + + S VI KC+E + + L + L+TH+ GC + +
Sbjct: 183 -SELNGHVMRCVCDQNGSHVIQKCIEYVPPHHSAGLLDNIVTCVVPLSTHLHGCRIIRHI 241
Query: 170 INEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ +R RR ++ I A L++D GNYV+QHVL G + I L +L
Sbjct: 242 LKYVRDQRRRAAVMADILGAAVQLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQL 301
Query: 229 SLLRCGSHLVEK 240
S+ + S+++EK
Sbjct: 302 SMHKFASNVIEK 313
>gi|71746472|ref|XP_822291.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831959|gb|EAN77463.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 585
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 111/282 (39%), Gaps = 58/282 (20%)
Query: 44 LGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL- 100
L K + G FLQ++L D I I + + +LMTD Y L +QKL ++
Sbjct: 228 LAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFL---VQKLFDIMP 284
Query: 101 ---------VGSPCISLVISAAYRRF------------KDMMFSKEASS----------- 128
V +P I+ + + F ++++ +EA S
Sbjct: 285 KDVRYSVACVAAPKIAAIALTPHGTFSVQKMIETISSREELVIIREALSKDVVRLVKDAN 344
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
I K L+ + E +Y A +A + +GC L + +R L+ I
Sbjct: 345 GNHAIQKVLQLFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQRSTLVRHI 404
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
+++DP GNYV+Q+V+ GD K + I +L + + S+++EK
Sbjct: 405 LECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKFSSNVMEKVLCRV 464
Query: 241 ---YQRPSIFTPC---------QHKYGNFVIQQALRVTKGFQ 270
Q + T C Q +GN+V+Q AL + Q
Sbjct: 465 SPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTICTAGQ 506
>gi|294656065|ref|XP_458303.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
gi|199430829|emb|CAG86381.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
Length = 658
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 40 DIVLLGKTEGGSLFLQKML------SGKDSTITYK-IFEAVYKYPFDLMTDGYGCHL--- 89
+I+ L K + G FLQK + S + T +K IF+ VY + ++L+ D +G +L
Sbjct: 137 EILKLAKDQYGCRFLQKKIDENVIPSSQIRTENFKVIFKEVYPFIYELIIDPFGNYLVQK 196
Query: 90 ------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKD 119
R++QK+I L +SL+IS +
Sbjct: 197 LIDYCDDANLSLILEILQYNLFQISINQHGTRALQKIINSLNNDYQLSLLISGLNPFIIE 256
Query: 120 MMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN---NFINEMRGP 176
++ + VI K L + + +Y + +N +ATH GC L N +N M+
Sbjct: 257 LIKDLNGNHVIQKILNKYSPENCQFIYDSIINDLYVVATHKHGCCVLQKCLNHVNSMQLV 316
Query: 177 RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELSLLRCGS 235
+ + + + + L+ D GNYV+Q+++ + + + K+ + +K L L+ S
Sbjct: 317 QFSQKILMFDTFRK-LTNDQFGNYVLQYLISINSISINLKMYENFMKFGVNNLCNLKFSS 375
Query: 236 HLVEKYQRPS-IFTPCQHKYGNFVIQQALRVTKG 268
++VEK+ + + P + N ++ L+V +G
Sbjct: 376 NVVEKFLKNCYVNEPNSPAFSNLKLELCLQVMQG 409
>gi|300706085|ref|XP_002995351.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
gi|239604391|gb|EEQ81680.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
Length = 512
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 29/250 (11%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARS 92
+Q + I L G+ +QK+L + + + +F +DL YGC R
Sbjct: 232 FFSQIEDSIYDLSSNLFGNYVIQKILPLLNESQKFTVFTEFKSRIYDLSLHPYGC---RV 288
Query: 93 MQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNH 152
+QKL+ CI +I + ++ + + VI K +E KN ++ + +
Sbjct: 289 IQKLMDCF---ECIDFIIEEIKQDIFCLIEDQNGNHVIQKYIEK-SPDKNLIIDVFKKDP 344
Query: 153 FRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLK 212
L+TH GC + + +L ++ S+ E L D GNYV+QH+L + D
Sbjct: 345 IF-LSTHRYGCRVIQRLLEFCVEADVKKILQILISNLESLVNDQYGNYVIQHMLTISDDS 403
Query: 213 YSEKICSLLKGKFEELSLLRCGSHLVEKY---------------------QRPSIFTPCQ 251
+ S + LS + S+++E+ +P IF C
Sbjct: 404 ERNAVISQIINNCYNLSKFKFSSNVIEQCIVISDHEQKNRFLNKFLEVSGGKPRIFNMCT 463
Query: 252 HKYGNFVIQQ 261
YGN+V+Q+
Sbjct: 464 DMYGNYVVQK 473
>gi|194744548|ref|XP_001954755.1| GF18428 [Drosophila ananassae]
gi|190627792|gb|EDV43316.1| GF18428 [Drosophila ananassae]
Length = 896
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 456 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYV---IQKFFEF- 511
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 512 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 570
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 571 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 630
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 631 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 690
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 691 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 737
>gi|405118729|gb|AFR93503.1| pumilio 2 [Cryptococcus neoformans var. grubii H99]
Length = 601
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
IV + GS F+Q+ L K+F+ +Y + LMTD +G ++ + M +L
Sbjct: 226 IVEFAGDQHGSRFIQQKLEIATPEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFEHGDQL 285
Query: 97 IKLLVGSPCISLVISAAYRRFK--------DMMFSKEASSV-------IIKCLETLDEQ- 140
K + V+ + + + D + +++ + + I++C+++ +
Sbjct: 286 QKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANH 345
Query: 141 ---------KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
+ + + + H ELA H GC L + + LLD +
Sbjct: 346 VVQRMINIGPPQSIPDSFIGHVEELAKHPYGCRVLQKTFENLDDKMKRSLLDEMHKCVIS 405
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYV+Q V+ +G + K+ LKG+ + + S++VEK
Sbjct: 406 LTEDQFGNYVIQSVITVGKSEDRNKVVDQLKGRITTFARHKFASNVVEK 454
>gi|254568676|ref|XP_002491448.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|238031245|emb|CAY69168.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|328352042|emb|CCA38441.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 759
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 32/229 (13%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------ARSMQ 94
+ + GS F+Q+ LS IFE + ++LMTD +G ++
Sbjct: 430 FARDQHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQKYFEHGSEEQKA 489
Query: 95 KLIKLLVGS-PCISL----------------------VISAAYRRFKDMMFSKEASSVII 131
+L+K++ G +SL + S ++ + + VI
Sbjct: 490 RLLKIMTGKVQSLSLQMYGCRVVQRALEFVQLEQQIEIASELQDNVLQLVEDQNGNHVIQ 549
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEF 191
K +E + + + + H L+TH GC + + + +L+++S+H +
Sbjct: 550 KSIEKISFDQISFILESLRQHIYHLSTHPYGCRVIQRLLEYCSESEQKFILEVLSNHIFY 609
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +D GNYV+QH+L G+ Y I ++ S + S+ VEK
Sbjct: 610 LIQDQYGNYVIQHILEFGEEGYRSTITEIVTKNLVMFSKHKFASNAVEK 658
>gi|440291461|gb|ELP84730.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 470
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ QK++ +I E + + + YG RS+QKLI ++L+
Sbjct: 194 GNYLCQKLIEVVKPDQRVEIIEEIGDKIHTISRNIYG---TRSVQKLINSASSKNEVNLI 250
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNH--FRELATHVRGCVSLN 167
+++F + VI +CL+ D+ +N ++ A + + +++H GC +
Sbjct: 251 RKYLEPYVINLIFDINGNHVIQECLKVFDKPENSFIFDAILENGNLVRVSSHKHGCCVVQ 310
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
I+ + L++ I ++ L KD GNYVVQ+VLG+ + S ++ + + E
Sbjct: 311 RCIDNGNEEQLSSLVNDIVKYSLALVKDAFGNYVVQYVLGIEGV--SVRVTNCIIENLIE 368
Query: 228 LSLLRCGSHLVEK 240
LS+ + S+++EK
Sbjct: 369 LSMQKFSSNVIEK 381
>gi|349603126|gb|AEP99054.1| Pumilio-like protein 2-like protein, partial [Equus caballus]
Length = 235
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ + V+ KC+E + Q + + A L+TH GC + + + +L
Sbjct: 16 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPIL 75
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY- 241
+ + H E L +D GNYV+QHVL G + KI S ++GK LS + S++VEK
Sbjct: 76 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV 135
Query: 242 ---------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 136 THASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 189
>gi|384494635|gb|EIE85126.1| hypothetical protein RO3G_09836 [Rhizopus delemar RA 99-880]
Length = 680
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 36/245 (14%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH- 88
KN L Q + IV + GS F+Q+ L +FE + LMTD +G +
Sbjct: 325 KNYELIQLEGHIVEFSGDQHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGNYV 384
Query: 89 ---------------LARSMQKLIKLLVGSPCISLVISAAYRRF---KDMMFSKEASSVI 130
LAR M+ + L VI A + +E +
Sbjct: 385 LQKFFEHGNQLQKAVLARQMEGHVMSLSLQMYGCRVIQKALEYVLTEQQACLIRELDGYV 444
Query: 131 IKCLETLDEQKNEVLYLA----AMNHFR-----------ELATHVRGCVSLNNFINEMRG 175
+KC++ D+ N V+ A H R L+TH GC + + G
Sbjct: 445 LKCVK--DQNGNHVIQKAIERVPAQHIRFIIDAFKGQVYHLSTHPYGCRVIQRVLEYCTG 502
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGS 235
++ LL + E L KD GNYV+QH+L G+ + I + G+ S + S
Sbjct: 503 EQKNPLLKELDDFIESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHKFAS 562
Query: 236 HLVEK 240
++VEK
Sbjct: 563 NVVEK 567
>gi|195452258|ref|XP_002073278.1| GK14049 [Drosophila willistoni]
gi|194169363|gb|EDW84264.1| GK14049 [Drosophila willistoni]
Length = 873
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 454 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYV---IQKFFEF- 509
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 510 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 568
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 569 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 628
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 629 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNVVEKCVT 688
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 689 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 735
>gi|194903420|ref|XP_001980865.1| GG17394 [Drosophila erecta]
gi|190652568|gb|EDV49823.1| GG17394 [Drosophila erecta]
Length = 937
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 520 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 575
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 576 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 634
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 635 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 694
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 695 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 754
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 755 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 801
>gi|195499330|ref|XP_002096903.1| GE24797 [Drosophila yakuba]
gi|194183004|gb|EDW96615.1| GE24797 [Drosophila yakuba]
Length = 935
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 518 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 573
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 574 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 632
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 633 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 692
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 693 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 752
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 753 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 799
>gi|356557841|ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISA 112
F + L+ + + K+FE V + YGC R +QK I+++ I +V
Sbjct: 776 FFEHGLASQRRELANKLFEHVLTLSLQM----YGC---RVIQKAIEVVDLDQKIKMVQEL 828
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+ + + + VI KC+E + E + + L+TH GC + +
Sbjct: 829 DGNIMR-CVRDQNGNHVIQKCIECVPEDAINFIVSTFFDQVVTLSTHPYGCRVIQRVLEH 887
Query: 173 MRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLL 231
+ P + ++D I L++D GNYVVQHVL G I L GK ++S
Sbjct: 888 CKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQ 947
Query: 232 RCGSHLVEK 240
+ S++VEK
Sbjct: 948 KFASNVVEK 956
>gi|28573153|ref|NP_788604.1| pumilio, isoform E [Drosophila melanogaster]
gi|25013093|gb|AAN71644.1| SD07661p [Drosophila melanogaster]
gi|28381200|gb|AAO41523.1| pumilio, isoform E [Drosophila melanogaster]
Length = 935
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 518 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 573
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 574 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 632
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 633 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 692
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 693 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 752
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 753 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 799
>gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
Length = 972
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+F+ V P L YGC R +QK I+++ I +V
Sbjct: 691 FFEHGLPPQRRELADKLFDNVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 743
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + + L+TH GC +
Sbjct: 744 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRV 799
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + ++D I S L++D GNYV+QHVL G I L GK ++
Sbjct: 800 LEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQM 859
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 860 SQQKFASNVVEK 871
>gi|15227051|ref|NP_180482.1| pumilio 2 [Arabidopsis thaliana]
gi|334184556|ref|NP_001189630.1| pumilio 2 [Arabidopsis thaliana]
gi|75217075|sp|Q9ZW06.1|PUM2_ARATH RecName: Full=Pumilio homolog 2; Short=APUM-2; Short=AtPUM2
gi|3980413|gb|AAC95216.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253126|gb|AEC08220.1| pumilio 2 [Arabidopsis thaliana]
gi|330253127|gb|AEC08221.1| pumilio 2 [Arabidopsis thaliana]
Length = 972
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVIS- 111
F + L + + K+F+ V P L YGC R +QK I+++ I +V
Sbjct: 691 FFEHGLPPQRRELADKLFDNVL--PLSLQM--YGC---RVIQKAIEVVDLDQKIKMVKEL 743
Query: 112 --AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ E + + L+TH GC +
Sbjct: 744 DGHVMRCVRD----QNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRV 799
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + ++D I S L++D GNYV+QHVL G I L GK ++
Sbjct: 800 LEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQM 859
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 860 SQQKFASNVVEK 871
>gi|442618164|ref|NP_001262404.1| pumilio, isoform H [Drosophila melanogaster]
gi|440217235|gb|AGB95786.1| pumilio, isoform H [Drosophila melanogaster]
Length = 921
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 504 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 559
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 560 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 618
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 619 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 678
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 679 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 738
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 739 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 785
>gi|226293282|gb|EEH48702.1| mRNA binding protein Pumilio 2 [Paracoccidioides brasiliensis Pb18]
Length = 958
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 123/297 (41%), Gaps = 62/297 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S K+F + LMTD +G H +S
Sbjct: 536 IVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQS 595
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
++++ + ++L V+ A D S KE + ++KC++ D+
Sbjct: 596 QKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVK--DQNG 653
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + R +L +
Sbjct: 654 NHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGDRQAILAELH 713
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
S + L D GNYV+QH+L G+ KI S++ + S + S++VEK
Sbjct: 714 SCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVVEKSIEFGA 773
Query: 242 --QRPSIF----TP-----------CQHKYGNFVIQQALRVTKGFQMTER-NIIQEL 280
QR I TP + +YGN+VIQ+ L KG +ER N++ ++
Sbjct: 774 EDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKG---SERENLVSQI 827
>gi|15227038|ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana]
gi|75217073|sp|Q9ZW02.1|PUM3_ARATH RecName: Full=Pumilio homolog 3; Short=APUM-3; Short=AtPUM3
gi|3980417|gb|AAC95220.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253122|gb|AEC08216.1| pumilio 3 [Arabidopsis thaliana]
Length = 964
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + V+ KC+E + E+
Sbjct: 711 YGC---RVIQKAIEVVDLDQKIQMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEEN 763
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNY 200
E + H L+TH GC + + P + +++ I S L++D GNY
Sbjct: 764 IEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNY 823
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 824 VVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEK 863
>gi|145509246|ref|XP_001440567.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407784|emb|CAK73170.1| unnamed protein product [Paramecium tetraurelia]
Length = 527
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 30/240 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG-SPCISL 108
G+ +QK+ +S + ++F + + +DL + +GC R MQKLI+ + +
Sbjct: 246 GNYVVQKIFECTNSKLQQRMFNKLKPHFYDLSKNTFGC---RVMQKLIEYTCQRNDLQII 302
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
++ + +++ + VI K LET D+ K E + F + + GC ++
Sbjct: 303 ILQQLQSNMRSLIYDLNGNYVIFKMLETFDKLKMEFMIPIVEESFNYMGQQIYGCKIIHK 362
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK--ICSLLKGKFE 226
I + + ++ L + LS+ GNYV+QH+L + EK + L+ +F
Sbjct: 363 IIQQYSQQQIAKIIRLSVQNYNILSQTEYGNYVLQHILQYW-IPSQEKAYLVQLVLQQFF 421
Query: 227 ELSLLRCGSHLVEKY------------------QRPSIFTP-----CQHKYGNFVIQQAL 263
+LS+ + S+ VE+ + P+ +T H+Y N+VI++ L
Sbjct: 422 QLSINKYASNTVERALEALGKQELISIMKWLLCKSPNQYTSNFVVLANHQYANYVIKKFL 481
>gi|386765393|ref|NP_001247002.1| pumilio, isoform F [Drosophila melanogaster]
gi|383292588|gb|AFH06320.1| pumilio, isoform F [Drosophila melanogaster]
Length = 925
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 508 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 563
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 564 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 622
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 623 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 682
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 683 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 742
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 743 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 789
>gi|384484809|gb|EIE76989.1| hypothetical protein RO3G_01693 [Rhizopus delemar RA 99-880]
Length = 747
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 38/238 (15%)
Query: 38 DYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------A 90
D IV + GS F+Q+ L +S +FE V LMTD +G ++
Sbjct: 489 DGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHG 548
Query: 91 RSMQKLI--KLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETL 137
MQK I K + G +SL V+ A + KE ++KC++
Sbjct: 549 NQMQKTILAKQMEGH-VLSLSLQMYGCRVVQKALEHVLTEQQAKLVKELDGCVLKCIK-- 605
Query: 138 DEQKNEVLYLA----AMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLL 182
D+ N V+ A H + LATH GC + + G LL
Sbjct: 606 DQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQTGPLL 665
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
D + L +D GNYV+QH+L G + ++G +LS + S++VEK
Sbjct: 666 DELHRCTSQLVQDQYGNYVIQHILERGRPADKSLVIEKIRGHVLQLSKHKFASNVVEK 723
>gi|313245253|emb|CBY40040.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 22/236 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL- 108
G+ +QK L ++ ++ + L YGC R +QK ++ P +
Sbjct: 245 GNYVIQKFLEFGSVEQRVQLLNSIKGHVLQLSLQMYGC---RVIQKGLEAFSHLPEHQID 301
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
++ + + + V+ K +E + + + A +L+TH GC +
Sbjct: 302 IVKELEGHVLKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQR 361
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + +LD I E L+ D GNYVVQH+L G KI ++G+ +L
Sbjct: 362 ILEHCNTDQTAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQL 421
Query: 229 SLLRCGSHLVEKYQRPS------------------IFTPCQHKYGNFVIQQALRVT 266
+ + S+++EK S +FT + +Y N+V+Q+ L +
Sbjct: 422 AQHKFASNVIEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIA 477
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 7/201 (3%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
K + G+ +QK++ S I +A + L T YGC R +Q++++ +
Sbjct: 315 KDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGC---RVIQRILEH-CNTDQ 370
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
+ ++ + + + + + + V+ LE + +LA H
Sbjct: 371 TAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNV 430
Query: 166 LNNFINEMRGPRRGGLLDLI--SSHAEF-LSKDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
+ + R ++D + SS A F + KD NYVVQ +L + D+ K+ S +K
Sbjct: 431 IEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKRKLVSQMK 490
Query: 223 GKFEELSLLRCGSHLVEKYQR 243
L G H++ K +
Sbjct: 491 PHINNLKRYTYGKHIITKLDK 511
>gi|384485031|gb|EIE77211.1| hypothetical protein RO3G_01915 [Rhizopus delemar RA 99-880]
Length = 649
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 58/279 (20%)
Query: 48 EGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARSMQKLIKL 99
+ GS F+Q+ L S +FE + LMTD +G H +++ + ++
Sbjct: 338 QHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQKFFEHGSQAQKTVLAK 397
Query: 100 LVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQKNEVLYLA 148
+ + +SL V+ A + +E ++KC++ D+ N V+ A
Sbjct: 398 HMETHVVSLSLQMYGCRVVQKALEYVLTDQQAALVRELDGCVLKCVK--DQNGNHVVQKA 455
Query: 149 ----AMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLS 193
+H + LATH GC + + LL+ ++ + L
Sbjct: 456 IERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQRVFEHCPKEQTIHLLEELNRNTSQLV 515
Query: 194 KDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------------- 240
+D GNYV+QH+L G+ K + S +KG +LS + S++VEK
Sbjct: 516 QDQYGNYVIQHILEHGEAKDKALVISKVKGHVLQLSKHKFASNVVEKCVAYGNPQDRQEL 575
Query: 241 -----YQRPSIFTP----CQHKYGNFVIQQALRVTKGFQ 270
RP P + +Y N+V+Q+ L V G Q
Sbjct: 576 IEEVLLTRPDGTYPLMSMMKDQYANYVVQKMLDVVDGSQ 614
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 23/222 (10%)
Query: 32 ALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR 91
AL+ + D ++ K + G+ +QK + + I + ++ + L T YGC R
Sbjct: 430 ALVRELDGCVLKCVKDQNGNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGC---R 486
Query: 92 SMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMN 151
+Q++ + I L+ R + + + +I+ + E K++ L ++ +
Sbjct: 487 VIQRVFEHCPKEQTIHLL--EELNRNTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVK 544
Query: 152 -HFRELATH------VRGCVSLNN------FINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
H +L+ H V CV+ N I E+ R G L+S + KD
Sbjct: 545 GHVLQLSKHKFASNVVEKCVAYGNPQDRQELIEEVLLTRPDGTYPLMS-----MMKDQYA 599
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
NYVVQ +L + D + + + +K + L G HL+ K
Sbjct: 600 NYVVQKMLDVVDGSQRDLLIAKIKPHLQGLKKYTYGKHLIHK 641
>gi|195330502|ref|XP_002031942.1| GM26283 [Drosophila sechellia]
gi|194120885|gb|EDW42928.1| GM26283 [Drosophila sechellia]
Length = 873
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 456 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 511
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 512 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 570
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 571 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 630
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 631 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 690
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 691 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 737
>gi|378756380|gb|EHY66404.1| hypothetical protein NERG_00044 [Nematocida sp. 1 ERTm2]
Length = 461
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 138/362 (38%), Gaps = 84/362 (23%)
Query: 3 EGGRRPDLNRGIGIANLSTSIGPG-----------TYGKNALLAQPDYDIVLLGKTEGGS 51
E G+R L I I + S++ + K ++ + I + K + GS
Sbjct: 99 EKGKRHILLNSIKIDSFSSTPAAEPLKDQFFEEVYAFAKKRGISSSENLICAISKDQEGS 158
Query: 52 LFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM---------QKLIKLLVG 102
F+QK L G + FE + + DL+ D +G ++ + +K+ + G
Sbjct: 159 RFIQKKLDGASAEEIAMTFEEICPWIGDLIADLFGNYVVQKFLEIGTHEQREKIFSAMEG 218
Query: 103 SPCISL--------VISAA----------YRRFK----DMMFSKEASSVIIKCLETLDEQ 140
+ I L VI A R K D++ + + V+ KC+E +D
Sbjct: 219 T-IIPLALHMYGCRVIQKALECKDINRKIVERIKGHVIDLVCDQNGNHVVQKCVECVDSD 277
Query: 141 KNEVLYLAAMNHFRE----LATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
+ F E L+ H GC + + +D I S+A+ L +D
Sbjct: 278 -------FVIKEFEEDAVSLSRHRYGCRVIQRIFE--NSTKCASAIDKIISNAKLLVEDQ 328
Query: 197 SGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--------------YQ 242
GNYV+QH+L G + KI + L E S + S+++EK Q
Sbjct: 329 YGNYVIQHILEKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCVICGTMEDRKHMLKQ 388
Query: 243 RPSIFTP---------CQHKYGNFVIQQALRVTKGFQMTE-----RNIIQELGQSSFIQG 288
S P K+GN+VIQ+ L V G + I +L +SS+ +
Sbjct: 389 LKSAVGPSGEDMLIHITMDKFGNYVIQRLLDVLTGADKEVLMAHLKANISDLKKSSYAKC 448
Query: 289 IV 290
I+
Sbjct: 449 II 450
>gi|296482387|tpg|DAA24502.1| TPA: pumilio homolog 2 [Bos taurus]
Length = 370
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 116/302 (38%), Gaps = 71/302 (23%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + + LMTD +G ++ +QK
Sbjct: 29 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV---IQKFFEFG 85
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
KL + + V+ A + + + K S
Sbjct: 86 SLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 145
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRE--------LATHVRGCVSLNNFINEMRGPR 177
V+ KC+E + Q + + A F L+TH GC + + +
Sbjct: 146 GNHVVQKCIECVQPQSLQFIIDAFKGQFISSNCFKVFVLSTHPYGCRVIQRILEHCTAEQ 205
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHL 237
+L+ + H E L +D GNYV+QHVL G + KI S ++GK LS + S++
Sbjct: 206 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 265
Query: 238 VEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERN 275
VEK +++T + +Y N+V+Q+ + + + Q R
Sbjct: 266 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RK 322
Query: 276 II 277
II
Sbjct: 323 II 324
>gi|242036643|ref|XP_002465716.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
gi|241919570|gb|EER92714.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
Length = 716
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 97/242 (40%), Gaps = 50/242 (20%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPF-DLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ +QKML D +I + + P L+ H R +Q+LI+ + I L
Sbjct: 469 GNYLVQKMLEVCDEGQRLRIILVLTQDPVKQLIAISLNTHGTRVVQRLIETVRSRDQIIL 528
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+ISA F ++ + VI KCL + N + C+S
Sbjct: 529 IISALQPNFMLLVNDPNGNHVIQKCLTNFGAEDN------------------KRCIS--- 567
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
RG + L+ I + L++DP GNYVVQ+VL L + + S +GK+ L
Sbjct: 568 ---NARGVYQANLIVEICARGFELAQDPFGNYVVQYVLELKIPSANAHLASQFEGKYIYL 624
Query: 229 SLLRCGSHLVEKYQRPSIFTP----------------------CQHKYGNFVIQQALRVT 266
S + S++VE+ + F P Q Y N+VI AL T
Sbjct: 625 SKQKVSSNVVERCLK---FFPDDAKAVIVHELLLLSGSHFEQLLQDPYANYVIYTALLHT 681
Query: 267 KG 268
KG
Sbjct: 682 KG 683
>gi|225683895|gb|EEH22179.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 932
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 123/297 (41%), Gaps = 62/297 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S K+F + LMTD +G H +S
Sbjct: 510 IVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQS 569
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
++++ + ++L V+ A D S KE + ++KC++ D+
Sbjct: 570 QKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVK--DQNG 627
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + R +L +
Sbjct: 628 NHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGDRQAILAELH 687
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
S + L D GNYV+QH+L G+ KI S++ + S + S++VEK
Sbjct: 688 SCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVVEKSIEFGA 747
Query: 242 --QRPSIF----TP-----------CQHKYGNFVIQQALRVTKGFQMTER-NIIQEL 280
QR I TP + +YGN+VIQ+ L KG +ER N++ ++
Sbjct: 748 EDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKG---SERENLVSQI 801
>gi|158828189|gb|ABW81068.1| Mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 968
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + V+ KC+E + E+
Sbjct: 710 YGC---RVIQKAIEVVDLDQKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEEN 762
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
E + H L+TH GC + + P + +++ I S L++D GNY
Sbjct: 763 IEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNY 822
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 823 VVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEK 862
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 34/234 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 724 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 783
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS + + +
Sbjct: 784 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 843
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 844 NHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH 903
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H E L +D GNYVVQHVL G + ++ S ++G+ LS + S++VEK
Sbjct: 904 QHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEK 957
>gi|145537131|ref|XP_001454282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422037|emb|CAK86885.1| unnamed protein product [Paramecium tetraurelia]
Length = 517
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLV 101
V K G+ +QK+ ++F + + ++L + +GC R +QK+I+++
Sbjct: 230 VQFSKDVFGNYVIQKIFEKGTPIQQLRLFNKIRPHAYELSKNNFGC---RVIQKIIEIIY 286
Query: 102 GSPCI-SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+ + +I + + K +++ + VI+KCLE L ++K E + L +
Sbjct: 287 NNESLQDQLIDSIKLQVKSLLYDSSGNYVILKCLEVLQKEKIEFFLQPIEDSTLYLCSSQ 346
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L + + ++ H LS+ GN+++Q + + +Y + + +
Sbjct: 347 YGCKILLKALELFSPTQTDKIMTTCLQHQYNLSQQEFGNHILQ--FAIKNTQYQQFVVNF 404
Query: 221 LKGKFEELSLLRCGSHLVEK 240
+ FE+L + + S+ VEK
Sbjct: 405 VLSNFEKLCMNKYASNTVEK 424
>gi|154343920|ref|XP_001567904.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065238|emb|CAM40666.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 818
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G +T+ E + + +L YGC R +QK I+++ + + +
Sbjct: 451 GNYVLQKLLDKGNTPQLTFAA-ERMCGHVVELTMQTYGC---RVIQKCIEVMPPA-GLDI 505
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+++ + + + VI KC+E + +Q ++ A ELATH GC +
Sbjct: 506 ILAELKDNVAKCIQDQNGNHVIQKCVEVIPQQCGFIIS-AFSGRVMELATHAYGCRVIQC 564
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL-GLGDLKYSEKICSLLKGKFEE 227
+ +L+ + + L+KD GNYV+QHVL + D E + + LK KF
Sbjct: 565 IMQHCPEQEDTIFNELLKA-VDVLAKDQYGNYVIQHVLQNVKDENKIESVYAALKPKFFY 623
Query: 228 LSLLRCGSHLVEK-YQRPS 245
LS + S+++EK Y R S
Sbjct: 624 LSKQKFASNVMEKLYARSS 642
>gi|299471158|emb|CBN79015.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 183
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 156 LATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE 215
+ATH GC + I+ + L+ +S HA L +DP GNYVVQ+VLG+ +
Sbjct: 9 VATHRHGCCVIQRAIDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSRDEAV 68
Query: 216 KICSLLKGKFEELSLLRCGSHLVEK----------------YQRPSIFTP-CQHKYGNFV 258
+ ++ GK LS+ + S+++EK P+ P Q +Y N+V
Sbjct: 69 TLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYV 128
Query: 259 IQQALRVT 266
IQ+ L++
Sbjct: 129 IQKTLQLA 136
>gi|195111827|ref|XP_002000478.1| GI22503 [Drosophila mojavensis]
gi|193917072|gb|EDW15939.1| GI22503 [Drosophila mojavensis]
Length = 871
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 427 IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYV---IQKFFEF- 482
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 483 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 541
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 542 QNGNHVVQKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTPEQTTPILD 601
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 602 ELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 661
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 662 HATRSERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 708
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 768 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 823
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 824 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 882
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 883 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 942
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 943 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 1002
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 1003 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1049
>gi|195396057|ref|XP_002056649.1| GJ10105 [Drosophila virilis]
gi|194143358|gb|EDW59761.1| GJ10105 [Drosophila virilis]
Length = 812
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 391 IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYV---IQKFFEF- 446
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 447 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 505
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 506 QNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTQPILD 565
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 566 ELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 625
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 626 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 672
>gi|195055380|ref|XP_001994597.1| GH15257 [Drosophila grimshawi]
gi|193892360|gb|EDV91226.1| GH15257 [Drosophila grimshawi]
Length = 805
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 507 QNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 566
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 567 ELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 626
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 627 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 673
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 90/239 (37%), Gaps = 55/239 (23%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 392 IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYV---IQKFFEF- 447
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
G+P EQKN L + H +LA +
Sbjct: 448 -GTP----------------------------------EQKNN-LGMQVKGHVLQLALQM 471
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC + + + ++ ++ + H KD +GN+VVQ + D + + +
Sbjct: 472 YGCRVIQKALESISPDQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFVINA 531
Query: 221 LKGKFEELSLLRCGSHLVEK---YQRPSIFTP------------CQHKYGNFVIQQALR 264
KG+ LS G ++++ + TP Q +YGN+VIQ L
Sbjct: 532 FKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTENLIQDQYGNYVIQHVLE 590
>gi|409194216|gb|AFV31434.1| pumilio [Hydractinia echinata]
Length = 979
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 66/291 (22%), Positives = 106/291 (36%), Gaps = 59/291 (20%)
Query: 9 DLNRGIGIANLSTSI-GPGTYG------------------------KNALLAQPDYDIVL 43
D+ RG G A L +SI G T G N L IV
Sbjct: 672 DMRRGYGTAGLGSSIFGSSTAGLYRRAGGRDSGRSKLLEDFRNNRFPNLQLHDLQRHIVE 731
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-------QKL 96
+ + GS F+Q+ L +F + + LMTD +G ++ + QKL
Sbjct: 732 FSQDQHGSRFIQQKLERASILEKNMVFNEILTAAYSLMTDVFGNYVIQKFFEFGSPEQKL 791
Query: 97 I-----------------------KLLVGSPCISLVISAAYRRFKDMMFS----KEASSV 129
+ K L P + S R + + + V
Sbjct: 792 LLAQRIKGHVLPLALQMYGCRVIQKALETIPPEMTIHSELVRELDGHVLKCVKDQNGNHV 851
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
+ KC+E +D + + + A L+TH GC + + + +L + H
Sbjct: 852 VQKCIECVDSVQLQFIIDAFQGQVFALSTHPYGCRVIQRILEHCTTEQTSPILGELHEHT 911
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L +D GNYV+QHVL G I ++++G LS + S+++EK
Sbjct: 912 ERLIQDQYGNYVIQHVLEHGSADDKSTIVNIVRGNVLLLSQHKFASNVIEK 962
>gi|357608364|gb|EHJ65955.1| putative pumilio [Danaus plexippus]
Length = 712
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ + V+ KC+E ++ + + A L+TH GC + + + +L
Sbjct: 496 DQNGNHVVQKCIECVEPAALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTAEQTAPVL 555
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-- 240
+ +H + L +D GNYVVQHVL G + ++ + ++GK +LS + S++VEK
Sbjct: 556 AELHAHTDQLIQDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCV 615
Query: 241 -----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ ++ + +Y N+V+Q+ + V + T+R ++
Sbjct: 616 THATRNERALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVA---EPTQRKVL 666
>gi|156389181|ref|XP_001634870.1| predicted protein [Nematostella vectensis]
gi|156221958|gb|EDO42807.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC------------- 87
IV + + GS F+Q+ L + + +F + + LMTD +G
Sbjct: 26 IVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQKFFEFGSEE 85
Query: 88 ---HLA-----------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
HLA R +QK ++ + + LV+ K + + +
Sbjct: 86 QKHHLASCIRGHVLPLALQMYGCRVIQKALECIPPNVQHELVMELDGHVLK-CVKDQNGN 144
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E +D + + A L+TH GC + + + +L+ +
Sbjct: 145 HVVQKCIECVDPHALQFIIDAFQGQVYALSTHPYGCRVIQRILEHCLTEQTLPILNEMHD 204
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L +D GNYV+QHVL G + KI L+G LS + S++VEK
Sbjct: 205 QTDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEK 257
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/287 (20%), Positives = 112/287 (39%), Gaps = 57/287 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL- 99
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 1107 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYV---IQKFFEFG 1163
Query: 100 ------LVGSPCISLVISAAYRRFKDMMFSKEASS------------------------- 128
+G V+ A + + + K S
Sbjct: 1164 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQN 1223
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E +D + + A L+TH GC + + + +LD +
Sbjct: 1224 GNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDEL 1283
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
+ E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 1284 HENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHA 1343
Query: 241 --------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTE 273
+ ++ + +Y N+V+Q+ + V++ Q+ +
Sbjct: 1344 TRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKK 1390
>gi|313231125|emb|CBY19123.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 24/237 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSP--CIS 107
G+ +QK L ++ ++ + L YGC R +QK ++ P I
Sbjct: 445 GNYVIQKFLEFGSVEQRVQLLNSIKGHVLQLSLQMYGC---RVIQKGLEAFSHLPEHQID 501
Query: 108 LVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN 167
+V K + + + V+ K +E + + + A +L+TH GC +
Sbjct: 502 IVKELEGHVLK-CVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQ 560
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
+ + +LD I E L+ D GNYVVQH+L G KI ++G+ +
Sbjct: 561 RILEHCNTDQTAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQ 620
Query: 228 LSLLRCGSHLVEKYQRPS------------------IFTPCQHKYGNFVIQQALRVT 266
L+ + S+++EK S +FT + +Y N+V+Q+ L +
Sbjct: 621 LAQHKFASNVIEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIA 677
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 7/201 (3%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
K + G+ +QK++ S I +A + L T YGC R +Q++++ +
Sbjct: 515 KDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGC---RVIQRILEH-CNTDQ 570
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
+ ++ + + + + + + V+ LE + +LA H
Sbjct: 571 TAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNV 630
Query: 166 LNNFINEMRGPRRGGLLDLI--SSHAEF-LSKDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
+ + R ++D + SS A F + KD NYVVQ +L + D+ K+ S +K
Sbjct: 631 IEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKRKLVSQMK 690
Query: 223 GKFEELSLLRCGSHLVEKYQR 243
L G H++ K +
Sbjct: 691 PHINNLKRYTYGKHIITKLDK 711
>gi|398021567|ref|XP_003863946.1| pumilio protein, putative [Leishmania donovani]
gi|322502180|emb|CBZ37263.1| pumilio protein, putative [Leishmania donovani]
Length = 837
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G +T+ E + + +L YGC R +QK I+++ S + +
Sbjct: 456 GNYVLQKLLDKGNTPQLTFAA-ERMCGHVVELTMQTYGC---RVIQKCIEVMP-SAGLDI 510
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+++ + + + VI KC+E + Q+ + A ELATH GC +
Sbjct: 511 ILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGCRVIQC 569
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL-GLGDLKYSEKICSLLKGKFEE 227
+ + + + + + L+KD GNYV+QHVL + D E + + LK KF
Sbjct: 570 IMQHCP-EQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFY 628
Query: 228 LSLLRCGSHLVEK-YQRPS 245
LS + S+++EK Y R S
Sbjct: 629 LSKQKFASNVMEKLYARSS 647
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 64/293 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L S +F + + LMTD +G ++ +QK +
Sbjct: 938 IVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYV---IQKFFEF- 993
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
GSP V+ A + + + K S
Sbjct: 994 -GSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVKD 1052
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E +D + + A N L+TH GC + + + +L
Sbjct: 1053 QNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPILA 1112
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ ++ E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 1113 ELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVT 1172
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ + + +Y N+V+Q+ + V+ + T+R ++
Sbjct: 1173 HATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVS---EPTQRKVL 1222
>gi|146097730|ref|XP_001468199.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
gi|134072566|emb|CAM71280.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
Length = 837
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G +T+ E + + +L YGC R +QK I+++ S + +
Sbjct: 456 GNYVLQKLLDKGNTPQLTFAA-ERMCGHVVELTMQTYGC---RVIQKCIEVMP-SAGLDI 510
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+++ + + + VI KC+E + Q+ + A ELATH GC +
Sbjct: 511 ILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGCRVIQC 569
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL-GLGDLKYSEKICSLLKGKFEE 227
+ + + + + + L+KD GNYV+QHVL + D E + + LK KF
Sbjct: 570 IMQHCP-EQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFY 628
Query: 228 LSLLRCGSHLVEK-YQRPS 245
LS + S+++EK Y R S
Sbjct: 629 LSKQKFASNVMEKLYARSS 647
>gi|167384832|ref|XP_001737111.1| pumilio [Entamoeba dispar SAW760]
gi|165900241|gb|EDR26620.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 526
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 51/289 (17%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR-------- 91
D V + K GS +Q+ + + T KI+ A+ + +L +D + ++ +
Sbjct: 211 DYVSMSKEHNGSRTVQQSIEKGNETERQKIWRALQDHIVELSSDLFANYVIQKALEFIPE 270
Query: 92 -----------SMQKLIKLLVGSPCISLVISAAYRRFKDMMF------------SKEASS 128
++ +L + G + + A + + ++F + +
Sbjct: 271 SRHIVPQKMKGNVLRLTLHMYGCRVVQKAVEYASVKDRRLLFEELRKSLVRCIEDQNGNH 330
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E D Q + A E H GC + I + LL +I H
Sbjct: 331 VIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPH 390
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
+ L++D GNYVVQ+VL G I +KG LS+ + S+++EK
Sbjct: 391 SLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPN 450
Query: 241 ---------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
YQ I Q ++ N+V+Q ++ + ER I EL
Sbjct: 451 ERQQILEEIYQNNGILQMMQDQFANYVVQ---KIIEAIDSLEREKIVEL 496
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 858 QNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 917
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H+E L +D GNYV+QHVL G + KI + ++GK LS + S++VEK
Sbjct: 918 ELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEK 974
>gi|350585829|ref|XP_003482059.1| PREDICTED: pumilio homolog 1 isoform 1 [Sus scrofa]
Length = 640
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 352 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 408
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 409 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 467
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 468 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 527
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 528 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 587
Query: 268 GFQ 270
Q
Sbjct: 588 PAQ 590
>gi|440302948|gb|ELP95254.1| hypothetical protein EIN_430600 [Entamoeba invadens IP1]
Length = 452
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H RS+QK+I I +I + D++F + VI +CL+T +++N+ ++
Sbjct: 214 HGTRSVQKMINCATTKAEIDELILSLSPHIVDLVFDGNGNHVIQECLKTFSKEQNKFIFD 273
Query: 148 AAM-NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL 206
+ + F E+ H GC + I+ + L+D + S+ + DP GNYVVQ++L
Sbjct: 274 GILGDSFVEICEHKHGCCVVQRCIDFGNRGQLNKLVDKVISNTLEIITDPYGNYVVQYIL 333
Query: 207 GLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ + ++ LS + S+++E+
Sbjct: 334 KVDVDHVCMDVTKIILDDLIVLSTQKFSSNVIEQ 367
>gi|444319188|ref|XP_004180251.1| hypothetical protein TBLA_0D02280 [Tetrapisispora blattae CBS 6284]
gi|387513293|emb|CCH60732.1| hypothetical protein TBLA_0D02280 [Tetrapisispora blattae CBS 6284]
Length = 951
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 50 GSLFLQKM---LSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC- 105
G+ +QK+ L+ TI + +++YK + + + YG RS+QK+I + +
Sbjct: 564 GNYLIQKLCDYLTIDQKTI---LIQSIYKNVYQISINQYG---TRSLQKIIDSIENNETQ 617
Query: 106 ISLVI------SAAYRRFKDMMFSKEASSVIIKCLETLDEQK-----NEVLYLAAMNHFR 154
I +++ + + + +M + VI KC+ K N ++Y N+
Sbjct: 618 IDILMQGFSIENTSIDQIISLMNDLNGNHVIQKCIFKFPNSKFDFLLNSIIY---ENNIV 674
Query: 155 ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLG--DLK 212
+++TH GC L + + + D + + L D GNY++Q++L + ++
Sbjct: 675 KISTHKHGCCVLQKLLGVCNDNQTQLISDKVIEYLNGLINDQFGNYIIQYILNIKTIEIP 734
Query: 213 YSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ KI +L G F +LS L+ S+++EKY R
Sbjct: 735 FMLKIYQILDGNFCKLSCLKFSSNVIEKYMR 765
>gi|407038528|gb|EKE39174.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
nuttalli P19]
Length = 222
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 119 DMMFSKEASSVIIKCLETLDEQKNEVLYLAAMN--HFRELATHVRGCVSLNNFINEMRGP 176
+++F + VI +CL+T + N ++ A ++ + ++ATH GC + I+
Sbjct: 12 ELIFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCIDYGNRQ 71
Query: 177 RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSH 236
+ L+D I ++ L KD GNYVVQ++L + + + +L +LS+ + S+
Sbjct: 72 QLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVIIDVTKMLLDDLIDLSMQKFSSN 131
Query: 237 LVEKYQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERN-IIQE-LGQSS 284
++EK R Q + F+ Q VTK Q + N +IQ L QSS
Sbjct: 132 VIEKLVRSDEIEARQMIFDRFL--QIKDVTKLLQDSYANYVIQTCLDQSS 179
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 970 QNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1029
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H+E L +D GNYV+QHVL G + KI + ++GK LS + S++VEK
Sbjct: 1030 ELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEK 1086
>gi|227430388|ref|NP_001153078.1| pumilio homolog 1 isoform 5 [Mus musculus]
Length = 944
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 656 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 712
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 713 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 771
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 772 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 831
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 832 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 891
Query: 268 GFQ 270
Q
Sbjct: 892 PGQ 894
>gi|361128047|gb|EHK99999.1| putative Pumilio like protein [Glarea lozoyensis 74030]
Length = 447
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 62/310 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
+V + GS F+Q+ L +S ++F + LMTD +G ++ + + ++
Sbjct: 52 VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQI 111
Query: 97 IKLLVGSPCISLVISAAYRRF---------------KDMMFSKEASSVIIKCLETLDEQK 141
K ++ + V+ + + + + +E S ++KC++ D+
Sbjct: 112 QKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVEELRSDVLKCVK--DQNG 169
Query: 142 NEVLYLA-----------AMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A ++ FR LATH GC + + + + +L+ +
Sbjct: 170 NHVVQKAIERVPTEHIQFVIDAFRGQVHVLATHPYGCRVIQRILEYCKPHDQAVVLEELH 229
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
A L D GNYV QHV+ G + KI ++ + LS + S++VEK
Sbjct: 230 QCASMLITDQYGNYVTQHVIQHGKPEDRAKIIKIITAQLLTLSKHKFASNVVEKSIQFGT 289
Query: 241 -YQRPSIF-----------TPCQ----HKYGNFVIQQALRVTKGFQMTERNIIQELGQSS 284
QR +I +P Q +YGN+VIQ+ L KG ER+ E +
Sbjct: 290 SEQRKAIVAQLTAMHSDGSSPLQLMMKDQYGNYVIQKLLGQLKG---EERDNFVEDMKPQ 346
Query: 285 FIQGIVPFNF 294
IQ + +NF
Sbjct: 347 LIQ-LKKYNF 355
>gi|340518502|gb|EGR48743.1| predicted protein [Trichoderma reesei QM6a]
Length = 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 107/268 (39%), Gaps = 54/268 (20%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH----------------LARSM 93
GS F+Q+ L +S +IF + LM D +G + LA M
Sbjct: 38 GSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYGSQLQKKILAEKM 97
Query: 94 Q-KLIKLLVGSPCISLVI-----------SAAYRRFKDMMF----SKEASSVIIKCLETL 137
+ K++ L V +V +A R + + + + V+ K +E +
Sbjct: 98 KGKVVDLSVQVYACRVVQKALEHILVEQQAALTRELEPEILRVIKDQNGNHVVQKIIELV 157
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
Q + + A LA+H GC + + + ++ + + A+ L D
Sbjct: 158 PRQHIDFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQLLITDQY 217
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIF--- 247
GNYV QHV+ G+ + E+I L+ G+ LS + S++VEK QR +I
Sbjct: 218 GNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASNVVEKCIEYGTPAQRTTIREQL 277
Query: 248 --------TPCQH----KYGNFVIQQAL 263
P Q ++GN+VIQ+ L
Sbjct: 278 TTAGPDGNNPLQQMMRDQFGNYVIQKLL 305
>gi|295666323|ref|XP_002793712.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278006|gb|EEH33572.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 947
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 62/297 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q ML +S ++F + LMTD +G H +S
Sbjct: 536 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQS 595
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
++++ + ++L V+ A D S KE + ++KC++ D+
Sbjct: 596 QKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVK--DQNG 653
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + R +L +
Sbjct: 654 NHVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCNEGDRQAILAELH 713
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
S + L D GNYV+QH+L G+ KI S++ + S + S++VEK
Sbjct: 714 SCSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVVEKSIEFGA 773
Query: 242 --QRPSIF----TP-----------CQHKYGNFVIQQALRVTKGFQMTER-NIIQEL 280
QR I TP + +YGN+VIQ+ L KG +ER N++ ++
Sbjct: 774 EDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKG---SERENLVSQI 827
>gi|354472363|ref|XP_003498409.1| PREDICTED: pumilio homolog 1 isoform 3 [Cricetulus griseus]
Length = 943
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 655 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 711
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 712 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 770
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 771 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 830
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 831 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 890
Query: 268 GFQ 270
Q
Sbjct: 891 PGQ 893
>gi|321475178|gb|EFX86141.1| hypothetical protein DAPPUDRAFT_308458 [Daphnia pulex]
Length = 581
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + + A L+TH GC + + + +L+
Sbjct: 361 QNGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHCTPEQTSPVLN 420
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + E L +D GNYV+QHVL G + +I + +KGK LS + S++VEK
Sbjct: 421 ELHHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQHKFASNVVEKCVS 480
Query: 241 ----YQRPSIF----------------TPCQHKYGNFVIQQALRVTKGFQ 270
+R S+ T + +Y N+V+Q+ + V + Q
Sbjct: 481 HATRSERASLIDEVISFNDASPHSPLHTMMKDQYANYVVQKMIDVAEPSQ 530
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 59/244 (24%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +F + + LMTD +G ++ +QK +
Sbjct: 246 IVEFSQDQHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYV---IQKFFEF- 301
Query: 101 VGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLETL-DEQKNEVLYLAAMNHFRELAT 158
GSP ++ R + VI K LE++ +Q+ E++ REL
Sbjct: 302 -GSPEQKSTLAQKIRGHVLPLALQMYGCRVIQKALESVPSDQQKEIV--------RELDG 352
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
HV CV KD +GN+VVQ + D + I
Sbjct: 353 HVLKCV-----------------------------KDQNGNHVVQKCIECVDPMQLQFII 383
Query: 219 SLLKGKFEELSLLRCGSHLVEK---YQRPSIFTPC------------QHKYGNFVIQQAL 263
+G+ LS G ++++ + P +P Q +YGN+VIQ L
Sbjct: 384 DAFEGQVLSLSTHPYGCRVIQRILEHCTPEQTSPVLNELHHNTETLIQDQYGNYVIQHVL 443
Query: 264 RVTK 267
K
Sbjct: 444 EHGK 447
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 819 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 875
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 876 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 934
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 935 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 994
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 995 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1054
Query: 268 GFQ 270
Q
Sbjct: 1055 PGQ 1057
>gi|320584088|gb|EFW98300.1| hypothetical protein HPODL_0192 [Ogataea parapolymorpha DL-1]
Length = 959
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 42/234 (17%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGS 103
K + GS F+Q+ L+ + IF + + DLMTD +G ++ +QK + G+
Sbjct: 436 FAKDQHGSRFIQQQLALSNDRDKEVIFNEIRNHAMDLMTDVFGNYV---IQKYFEH--GN 490
Query: 104 PCISLVISAAYR-RFKDMMFSKEASSVIIKCLETL---------DEQKNEVLYLAAM--- 150
V+ + R F D+ V+ K LE L DE + +L L
Sbjct: 491 DVQRKVMFESMRGSFYDLSLQMYGCRVVQKGLEALQLEEQLQILDELRENILLLVKDQNG 550
Query: 151 NHFRE------------------------LATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
NH + L+TH GC + + + +LD +
Sbjct: 551 NHVIQKSIECIPIAKIPFILDSIKHQIYHLSTHPYGCRVIQRLLEFSDQTDQQFILDELK 610
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ +L +D GNYV+QHV+ G +KY+++I ++ ELS + S+ VEK
Sbjct: 611 DYVYYLIQDQFGNYVIQHVVEHGSVKYTDEILQVVLENLVELSKHKFASNAVEK 664
>gi|260813527|ref|XP_002601469.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
gi|229286765|gb|EEN57481.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
Length = 734
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 46/241 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V + + GS F+Q+ L +F + + LMTD +G ++ +QK +
Sbjct: 397 VVEFSQDQHGSRFIQQKLERATPAEKQMVFNEILSAAYQLMTDVFGNYV---IQKFFEF- 452
Query: 101 VGSPCISLVISAAYRRF----------------------KDMMFS--------------- 123
G+P ++ R D+ FS
Sbjct: 453 -GTPEQKNALAQKIRGHVLPLALQMYGCRVIQKALECIPPDLKFSYQVELVKELDGHVLK 511
Query: 124 ----KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
+ + V+ KC+E +D + + + A L+TH GC + + +
Sbjct: 512 CVKDQNGNHVVQKCIECVDPSELQFIIDAFRGQVFALSTHPYGCRVIQRILEHCTVEQTI 571
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
+L+ + + E L +D GNYV+QHVL G + KI + L+GK LS + S++VE
Sbjct: 572 PILEELHENTERLVQDQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKFASNVVE 631
Query: 240 K 240
K
Sbjct: 632 K 632
>gi|74180929|dbj|BAE27746.1| unnamed protein product [Mus musculus]
Length = 944
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 656 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 712
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 713 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 771
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 772 LGHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 831
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 832 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 891
Query: 268 GFQ 270
Q
Sbjct: 892 PGQ 894
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI--- 97
IV + + GS F+Q+ L +F + + LMTD +G ++ +QK
Sbjct: 684 IVEFSQDQHGSRFIQQKLERASVLEKTMVFNEILSAAYSLMTDVFGNYV---IQKFFEFG 740
Query: 98 ----KLLVGSPCISLVISAAYRRFKDMMFSK----------------------------- 124
KLL+ V+ A + + + K
Sbjct: 741 SPEQKLLLAQRIKGHVLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDGHVLKCVKD 800
Query: 125 -EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ V+ KC+E +D + + + A L+TH GC + + + +L
Sbjct: 801 QNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPILA 860
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H E L +D GNYV+QHVL G + I ++++G LS + S+++EK
Sbjct: 861 ELHEHTERLIQDQYGNYVIQHVLEHGSPEDKSTIVNIVRGNVLLLSQHKFASNVIEK 917
Score = 38.5 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 21/198 (10%)
Query: 83 DGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKN 142
D +G + + +L + + ++SAAY D+ + VI K E ++
Sbjct: 690 DQHGSRFIQQKLERASVLEKTMVFNEILSAAYSLMTDVF----GNYVIQKFFEFGSPEQK 745
Query: 143 EVLYLAAMNHFRELATHVRGCVSLNNFINEMRG--PRRGGLLDLISSHAEFLSKDPSGNY 200
+L H LA + GC + + + P G L+ + H KD +GN+
Sbjct: 746 LLLAQRIKGHVLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDGHVLKCVKDQNGNH 805
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELS--------LLRCGSHLVEKYQRPSIFTPCQH 252
VVQ + D + I +G+ LS + R H ++ P + +H
Sbjct: 806 VVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPILAELHEH 865
Query: 253 -------KYGNFVIQQAL 263
+YGN+VIQ L
Sbjct: 866 TERLIQDQYGNYVIQHVL 883
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 820 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 876
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 877 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 935
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 936 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 995
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 996 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1055
Query: 268 GFQ 270
Q
Sbjct: 1056 PGQ 1058
>gi|237506877|gb|ACQ99191.1| pumilio [Bombyx mori]
Length = 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISA 112
F + + + +T+ K+ + V + +L YGC + + + I + +
Sbjct: 83 FFEPGTTEQKTTLAQKVVQ-VRGHVLNLALQMYGCRVIQKALESIPPEQQQEVVRKLDGH 141
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+ KD + + V+ KC+E ++ + + A L+TH GC + +
Sbjct: 142 VLKCVKD----QNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCSVIQRILEH 197
Query: 173 MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLR 232
+ +L+ + +H + L D GNYVVQHVL G + ++ + ++GK +LS +
Sbjct: 198 CTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHK 257
Query: 233 CGSHLVEK 240
S++VEK
Sbjct: 258 FASNVVEK 265
>gi|145535892|ref|XP_001453679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421401|emb|CAK86282.1| unnamed protein product [Paramecium tetraurelia]
Length = 532
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 30/240 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG-SPCISL 108
G+ +QK+ ++ + ++F + + +DL + +GC R MQKLI+ + L
Sbjct: 251 GNYVVQKIFECTNNKLQQRMFTKLKPHFYDLSKNAFGC---RVMQKLIEYTYNRNDLQIL 307
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
V+ + +++ + VI K LET D+ K E + F + + GC ++
Sbjct: 308 VLQQLQSNMRSLVYDLNGNYVIFKMLETFDKFKMEFMIPIVEESFNYMGQQIYGCKIIHK 367
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK--ICSLLKGKFE 226
I + + ++ L + LS+ GNYV+QH+L + EK + L+ +F
Sbjct: 368 IIQQYSQQQITKIIRLSVQNYNILSQTEYGNYVLQHILQYW-IPSQEKFHLVQLVLQQFF 426
Query: 227 ELSLLRCGSHLVEKY------------------QRPSIFTP-----CQHKYGNFVIQQAL 263
+LS+ + S+ VE+ + P+ +T H+Y N+VI++ L
Sbjct: 427 QLSINKYASNTVERALEAIGKQELVSIMKWLLCRSPNQYTSNFVVLSNHQYANYVIKKFL 486
>gi|348571016|ref|XP_003471292.1| PREDICTED: pumilio homolog 1-like isoform 3 [Cavia porcellus]
Length = 944
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 656 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 712
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 713 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 771
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 772 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 831
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 832 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 891
Query: 268 GFQ 270
Q
Sbjct: 892 PGQ 894
>gi|296086206|emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ + + + L YGC + + +++ L + + +
Sbjct: 589 GNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMEL 648
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + + L+TH GC +
Sbjct: 649 DGNVMRCVRD----QNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRV 704
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ ++D I L++D GNYVVQHVL G I + L G+ ++
Sbjct: 705 LEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQM 764
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 765 SQQKFASNVVEK 776
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 898 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPADQQNEMV 954
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 955 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 1013
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 1014 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 1073
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 1074 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Query: 268 GFQ 270
Q
Sbjct: 1134 PGQ 1136
>gi|154277700|ref|XP_001539687.1| hypothetical protein HCAG_05154 [Ajellomyces capsulatus NAm1]
gi|150413272|gb|EDN08655.1| hypothetical protein HCAG_05154 [Ajellomyces capsulatus NAm1]
Length = 352
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDE 139
L T YGC R +QK ++ ++ S+V K + + + VI K +E +
Sbjct: 8 LSTQMYGC---RVVQKALEHILTDQQASMVKELENHVLK-CVKDQNGNHVIQKAVERVPS 63
Query: 140 QKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGN 199
+ + A LA H GC + + P R +L+ + + + L D GN
Sbjct: 64 VHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAILEELHACSTSLIPDQFGN 123
Query: 200 YVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-------QRPSIF----T 248
YV+QHV+G G+ +I S++ + S + S++VEK QR I T
Sbjct: 124 YVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGADDQRAEILRQLTT 183
Query: 249 P-----------CQHKYGNFVIQQALRVTKGFQ 270
P + +YGN+VIQ+ L G +
Sbjct: 184 PNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLE 216
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 804 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 860
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 861 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 919
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 920 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 979
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 980 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1039
Query: 268 GFQ 270
Q
Sbjct: 1040 PGQ 1042
>gi|294953151|ref|XP_002787620.1| pumilio, putative [Perkinsus marinus ATCC 50983]
gi|239902644|gb|EER19416.1| pumilio, putative [Perkinsus marinus ATCC 50983]
Length = 645
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 34/234 (14%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
D V L + GS FLQ L + + +F AV L TD +G ++
Sbjct: 297 DAVELAMDQYGSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPE 356
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
R +QK+++ + + L+++ D + +
Sbjct: 357 EHIVILSEQLLGDILRLSFHMYGCRVVQKVLENVNAEQQV-LIVNELKGHVVDCVEDQNG 415
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ VI KC+ETL Q + + ++ H GC + I + L+ +
Sbjct: 416 NHVIQKCIETLPTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEMSEPLMQEVV 475
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ LS+D GNYVVQHV+ G + + + E+ + S++VEK
Sbjct: 476 ENLWMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNVVEK 529
>gi|66814744|ref|XP_641551.1| RNA binding protein [Dictyostelium discoideum AX4]
gi|60469557|gb|EAL67547.1| RNA binding protein [Dictyostelium discoideum AX4]
Length = 785
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ LQK + + + + + L YGC R +QK I+ + I L+
Sbjct: 509 GNYVLQKFFEHGTTEQKRILADKLSGHILSLTLQMYGC---RVIQKAIESIELDKQI-LL 564
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I + + + VI KC+E + + + + H +LATH GC +
Sbjct: 565 IGELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRI 624
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +LD + A L +D GNYV+QHVL G + I L+G+ LS
Sbjct: 625 LEHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLS 684
Query: 230 LLRCGSHLVEK 240
+ S+++EK
Sbjct: 685 QHKFASNVIEK 695
>gi|5106561|gb|AAD39751.1|AF128626_1 RNA binding protein PufA [Dictyostelium discoideum]
Length = 795
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ LQK + + + + + L YGC R +QK I+ + I L+
Sbjct: 519 GNYVLQKFFEHGTTEQKRILADKLSGHILSLTLQMYGC---RVIQKAIESIELDKQI-LL 574
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I + + + VI KC+E + + + + H +LATH GC +
Sbjct: 575 IGELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRI 634
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +LD + A L +D GNYV+QHVL G + I L+G+ LS
Sbjct: 635 LEHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLS 694
Query: 230 LLRCGSHLVEK 240
+ S+++EK
Sbjct: 695 QHKFASNVIEK 705
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 897 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 953
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 954 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 1012
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 1013 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 1072
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 1073 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1132
Query: 268 GFQ 270
Q
Sbjct: 1133 PGQ 1135
>gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa Japonica Group]
Length = 623
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + + L YGC R +QK+I ++ IS+V
Sbjct: 326 GNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGC---RVVQKVIDVVDLERKISIV 382
Query: 110 ---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
++ R D + + VI KC+E + E + + L TH GC +
Sbjct: 383 GELKNSVLRCISD----QNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVI 438
Query: 167 NNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ P + ++D I A L++D GNYVVQHVL G + I L G+
Sbjct: 439 QRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQV 498
Query: 226 EELSLLRCGSHLVEK 240
LS + S++VEK
Sbjct: 499 VNLSQQKYASNVVEK 513
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 48 EGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCIS 107
+ G+ +QK + + E + + + L T YGC R +Q++++ S
Sbjct: 396 QNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGC---RVIQRVLEHCHNPATQS 452
Query: 108 LVISAAYRRFKDMMFSKEASSVIIKCLET-LDEQKNEVLY-----LAAMNHFRELATHVR 161
V+ R D+ K + V+ LE E+++ ++ + ++ + + V
Sbjct: 453 AVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVE 512
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICS 219
C+S R G + +++SS F L KD GNYVVQ +L D K+ I S
Sbjct: 513 KCLSFG-----TPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILS 567
Query: 220 LLKGKFEELSLLRCGSHLVEKYQR 243
+K EL G H+V + ++
Sbjct: 568 SIKMHLNELKNYTFGKHIVARVEK 591
>gi|158578543|gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
Length = 970
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + V+ KC+E + E
Sbjct: 717 YGC---RVIQKAIEVVDLDQKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEDN 769
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
E + H L+TH GC + + P + +++ I S L++D GNY
Sbjct: 770 IEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQRKVMEEILSTVSMLAQDQYGNY 829
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 830 VVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEK 869
>gi|357472855|ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein [Medicago truncatula]
Length = 1025
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH---------LAR 91
+V + GS F+Q+ L + +++ + + LMTD +G + LA
Sbjct: 695 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAP 754
Query: 92 SMQKLIKLLVG---------------SPCISLV-ISAAYRRFKDM-------MFSKEASS 128
++L L+G I +V + K++ + + +
Sbjct: 755 QRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRDQNGNH 814
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP-RRGGLLDLISS 187
VI KC+E + E+ + + + L+TH GC + + P + ++D I
Sbjct: 815 VIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEILG 874
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G I L GK ++S + S++VEK
Sbjct: 875 AVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEK 927
>gi|387594744|gb|EIJ89768.1| hypothetical protein NEQG_00538 [Nematocida parisii ERTm3]
gi|387596408|gb|EIJ94029.1| hypothetical protein NEPG_00694 [Nematocida parisii ERTm1]
Length = 461
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 53/276 (19%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL- 108
G+ +QK L + KIF A+ L YGC R +QK ++ C +
Sbjct: 193 GNYVVQKFLEIGTTEQREKIFFAMESTIISLALHMYGC---RVIQKALE------CKDIN 243
Query: 109 --VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRE----LATHVRG 162
++ D++ + + V+ KC+E +D + F E L+ H G
Sbjct: 244 RKIVEKIKGHVIDLVCDQNGNHVVQKCVECVDSD-------FVIKEFEEDAVSLSRHRYG 296
Query: 163 CVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
C + + +D I S+A+ L +D GNYV+QH+L G + KI + L
Sbjct: 297 CRVIQRIFE--NSTKCASAIDKIISNAKLLVEDQYGNYVIQHILEKGTHAHKRKIITELS 354
Query: 223 GKFEELSLLRCGSHLVEK--------------YQRPSIFTPC---------QHKYGNFVI 259
E S+ + S+++EK Q S P K+GN+V+
Sbjct: 355 DNIAEYSIHKFASNVMEKCVICGTSEDRRYMLKQLKSAVGPAGEDLLVHITMDKFGNYVV 414
Query: 260 QQALRVTKGFQ----MTE-RNIIQELGQSSFIQGIV 290
Q+ L V G M+ R I +L +SS+ + I+
Sbjct: 415 QRLLDVLTGADKEVLMSHLRANIADLKKSSYAKCII 450
>gi|340507638|gb|EGR33570.1| pumilio-family RNA binding repeat protein [Ichthyophthirius
multifiliis]
Length = 369
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 44 LGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGS 103
L K + G+ +QK + ++++ + DL YGC R +QK ++ L
Sbjct: 28 LVKDQFGNYVIQKFFEKGTNEQKVQLYQLLKGQVQDLSLHTYGC---RVIQKALEELKDY 84
Query: 104 PCI-SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRG 162
P + +I D + + + VI KC E ++ K +V+ + + R+LA H G
Sbjct: 85 PILQEAIIQELNDTIMDCIQDQHGNHVIQKCFEVINCSKLQVIIREVITNIRQLAFHPYG 144
Query: 163 CVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
C + + + + + + L K GNY++Q+++ G+ + + I ++K
Sbjct: 145 CRVIQRILEFCKTKETDLIYKKLMENLIDLCKCQYGNYIIQYIIEKGNNENKQNILKVIK 204
Query: 223 GKFEELSLLRCGSHLVEK 240
F LSL + S++ EK
Sbjct: 205 QYFVSLSLNKFASNVTEK 222
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRP 244
I A L KD GNYV+Q G + ++ LLKG+ ++LSL
Sbjct: 21 IYPEASSLVKDQFGNYVIQKFFEKGTNEQKVQLYQLLKGQVQDLSL-------------- 66
Query: 245 SIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQS 283
H YG VIQ+AL K + + + IIQEL +
Sbjct: 67 -------HTYGCRVIQKALEELKDYPILQEAIIQELNDT 98
>gi|289449229|dbj|BAI77478.1| pumilio [Bombyx mori]
Length = 416
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +F + + LMTD +G ++ +QK +
Sbjct: 86 IVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYV---IQKFFEFG 142
Query: 101 VGSPCISL-------VISAAYRRFKDMMFSKEASS------------------------- 128
+L V++ A + + + K S
Sbjct: 143 TTEQKTTLAQKVRGHVLNLALQMYGSRVIQKALESIPPEQQQEVVRELDGHVLKCVKDQN 202
Query: 129 ---VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
V+ KC+E ++ + + A L+TH GC + + + +L+ +
Sbjct: 203 GNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPVLNEL 262
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+H + L D GNYVVQHVL G + ++ + ++GK +LS + S++VEK
Sbjct: 263 HAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEK 317
>gi|222628370|gb|EEE60502.1| hypothetical protein OsJ_13800 [Oryza sativa Japonica Group]
Length = 750
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLV---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK+I ++ IS+V ++ R D + + VI KC+E + E
Sbjct: 488 YGC---RVVQKVIDVVDLERKISIVGELKNSVLRCISD----QNGNHVIQKCIECVPEDH 540
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNY 200
+ + L TH GC + + P + ++D I A L++D GNY
Sbjct: 541 IPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNY 600
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G + I L G+ LS + S++VEK
Sbjct: 601 VVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEK 640
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 69 IFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
+ E + + + L T YGC R +Q++++ S V+ R D+ K +
Sbjct: 544 VIEDILQKIYPLCTHQYGC---RVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNY 600
Query: 129 VIIKCLET-LDEQKNEVLY-----LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
V+ LE E+++ ++ + ++ + + V C+S R G +
Sbjct: 601 VVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGT-----PDEREGLIR 655
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+++SS F L KD GNYVVQ +L D K+ I S +K EL G H+V +
Sbjct: 656 EIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVAR 715
Query: 241 YQR 243
++
Sbjct: 716 VEK 718
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 861 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 916
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 917 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 976
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 977 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1036
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1037 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1064
>gi|325187460|emb|CCA21998.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 888
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC---- 105
G+ QK+++ D I AV + LM H RS+QK++++ S
Sbjct: 578 GNYLFQKLIARADEWQRLAIVRAVCPH---LMAAALNLHGTRSVQKVVEICAISQSEKKD 634
Query: 106 ------ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
L++ A + + VI + L+ + + + ++ A + TH
Sbjct: 635 ATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTH 694
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC L ++ ++ L+ + HA L +DP GNYVVQ+VL + E I
Sbjct: 695 RHGCCVLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAE--EAIGI 752
Query: 220 LLK--GKFEELSLLRCGSHLVEK 240
++K G ELS+ + S++VEK
Sbjct: 753 MMKPLGHVFELSIQKFSSNVVEK 775
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 966 QNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1025
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H+E L +D GNYV+QHVL G + KI + ++GK LS + S++VEK
Sbjct: 1026 ELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEK 1082
>gi|353242398|emb|CCA74046.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Piriformospora indica DSM 11827]
Length = 684
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 78 FDLMTDGYGCHLARSMQKLIKLLVGSPCI-SLVISAAYRRFKDMMFSKEASSVIIKCLET 136
L D YGC R +QK + G+P + V+S + + VI K +E
Sbjct: 403 LQLSLDMYGC---RVVQKALD--CGTPQQQAAVVSELNGHVLQCVKDANGNHVIQKIMEL 457
Query: 137 LDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDP 196
+ Q+N VL A + R LA+H GC L I LL+ + ++ L +D
Sbjct: 458 VPSQRN-VLLDAFSGNVRNLASHPYGCRVLQRSIEHAAPEETASLLEELHQNSSLLMQDQ 516
Query: 197 SGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHKYGN 256
GNYVVQ++L G + +++ L+G LS+ R HK+ +
Sbjct: 517 FGNYVVQYILEHGAPAHRDRMIDSLRGNV--LSMAR-------------------HKFAS 555
Query: 257 FVIQQALRVTKGFQMTERNIIQEL 280
V ++AL V+ Q R +I+E+
Sbjct: 556 NVCEKALLVSNDVQ--RRALIEEM 577
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 910 YGC---RVIQKALEFIPADQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 965
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 966 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1025
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1026 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1085
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1086 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1113
>gi|395526796|ref|XP_003765542.1| PREDICTED: pumilio homolog 1 isoform 3 [Sarcophilus harrisii]
Length = 946
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 728 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 787
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-- 241
+ H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 788 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 847
Query: 242 --------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 848 HASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 896
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 932 YGC---RVIQKALEFIPADQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 987
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 988 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1047
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1048 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1107
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1108 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1135
>gi|334329173|ref|XP_003341194.1| PREDICTED: pumilio homolog 1 isoform 3 [Monodelphis domestica]
Length = 946
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 728 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 787
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-- 241
+ H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 788 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 847
Query: 242 --------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 848 HASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 896
>gi|403340179|gb|EJY69363.1| Pumilio [Oxytricha trifallax]
Length = 1146
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 112/291 (38%), Gaps = 61/291 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR--------- 91
IV + GS F+Q+ S IF + F+LM D +G ++ +
Sbjct: 677 IVECAMDQYGSRFIQQKYDITSSAEKELIFNEILPESFNLMNDVFGNYVVQKLFEYGTEE 736
Query: 92 -----------SMQKLIKLLVGSPCIS------------LVISAAYRRFKDMMFSKEASS 128
++ KL K + G + +++S D + + +
Sbjct: 737 HRSTLAEQLLGNVLKLTKSMYGCRVVQKALEVISLHQQKILVSELKDNIIDCINDQNGNH 796
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + E + + EL H GC + + +++ I +
Sbjct: 797 VIQKCIEKMPCDDIEFIIKPVIEKTSELCVHTYGCRVIQRVLENSNEAYTRSIIEGILND 856
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYS-EKICSLLKGKFEELSLLRCGSHLVEK------- 240
L+ D GNYV+QH+L G ++ +++ +KGK ELS + S++VEK
Sbjct: 857 LHNLTMDQFGNYVIQHILENGKVQEDKDRVVKSIKGKVIELSNHKFASNVVEKCLQYASE 916
Query: 241 ---------------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
Q ++ + +YGN+VIQ+ + V++G Q
Sbjct: 917 KDKAELIEEFLDLNFDEEAAMNQNGVLYQMMKDRYGNYVIQKCIEVSQGKQ 967
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 898 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 954
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 955 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 1013
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 1014 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 1073
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 1074 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Query: 268 GFQ 270
Q
Sbjct: 1134 PGQ 1136
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 898 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 954
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 955 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 1013
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 1014 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 1073
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 1074 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Query: 268 GFQ 270
Q
Sbjct: 1134 PGQ 1136
>gi|157874927|ref|XP_001685873.1| putative pumilio protein 6 [Leishmania major strain Friedlin]
gi|68128946|emb|CAJ06238.1| putative pumilio protein 6 [Leishmania major strain Friedlin]
Length = 850
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G +T+ E + + +L YGC R +QK I+++ + + +
Sbjct: 457 GNYVLQKLLDKGNTPQLTFAA-ERMCGHVVELTMQTYGC---RVIQKCIEVMPAA-GLDI 511
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+++ + + + VI KC+E + Q+ + A ELATH GC +
Sbjct: 512 LLAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGCRVIQC 570
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL-GLGDLKYSEKICSLLKGKFEE 227
+ + + + + + L+KD GNYV+QHVL + D E + + LK KF
Sbjct: 571 IMQHCP-EQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFY 629
Query: 228 LSLLRCGSHLVEK-YQRPS 245
LS + S+++EK Y R S
Sbjct: 630 LSKQKFASNVMEKLYARSS 648
>gi|169597459|ref|XP_001792153.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
gi|111070044|gb|EAT91164.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
Length = 917
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 54/278 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH----------- 88
D+V + GS F+Q+ L +S + +IF+ + LM D +G +
Sbjct: 526 DVVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKFFEHGDQ 585
Query: 89 -----LARSMQKLIKLLVGSPCISLVISAAYRRF-------------KDMMFS---KEAS 127
LA M+ + L V+ A KD++ + + +
Sbjct: 586 TQKKILASKMKGHVSALANQMYACRVVQKALEHVLVDQQASMVKELEKDVLKTVKDQNGN 645
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI K ++ + + +V+ + H LA + GC + + ++ P+R ++ + +
Sbjct: 646 HVIQKVIDRVPMEHIQVIVESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQRRFIMTELHA 705
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
L D GNYV QHV+ G + KI SL+ +F S + S++VE+
Sbjct: 706 RGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNVVERCLVCSDD 765
Query: 241 YQRPSIFTPCQHK---------------YGNFVIQQAL 263
QR + K YGN+VIQ+ L
Sbjct: 766 EQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQKLL 803
>gi|195153222|ref|XP_002017528.1| GL22345 [Drosophila persimilis]
gi|194112585|gb|EDW34628.1| GL22345 [Drosophila persimilis]
Length = 675
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 251 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYV---IQKFFEF- 306
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 307 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIHKGLESISPEQQQEIVHELDGHVLKCVKD 365
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 366 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 425
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 426 ELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 485
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 486 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 532
>gi|221486916|gb|EEE25162.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 685
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE--ASSVIIKCLETLDEQKNEVL 145
H R++QKLI+ GS + +++A R ++ +K+ A+ V+ K L + + + +
Sbjct: 266 HGTRAVQKLIEP-AGSAATNELLAAL--RPSVVLLAKDVNANHVVQKILSSFPASRCDFV 322
Query: 146 YLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHV 205
+ + E++T GC + I+ + +L I+++A L +D GNYVVQ V
Sbjct: 323 FAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIAANALELMQDAFGNYVVQCV 382
Query: 206 LGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHK------------ 253
L L ++ + ++G ELS+ + S++VEK + TP Q
Sbjct: 383 LDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCL--VLGTPEQRNLIVDELLAEGDG 440
Query: 254 --------YGNFVIQQALRVT 266
Y N+VIQ+AL V+
Sbjct: 441 LKDLLLDSYANYVIQRALTVS 461
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 33/241 (13%)
Query: 26 GTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGY 85
G+ N LLA +VLL K + +QK+LS ++ +F V K ++ T+ +
Sbjct: 279 GSAATNELLAALRPSVVLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERH 338
Query: 86 GCHLARSMQKLIKLL---VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD-EQK 141
GC + MQ+ I S + + + A +D + +++C+ L E
Sbjct: 339 GCCV---MQRCIDAAPPRAKSEILQEIAANALELMQDAF-----GNYVVQCVLDLQIEGF 390
Query: 142 NEVLYLAAMNHFRELATH------VRGCVSL-----NNFINEMRGPRRGGLLDLISSHAE 190
N + A H REL+ V C+ L N I + GL DL+
Sbjct: 391 NGAVAGAIRGHIRELSMQKFSSNVVEKCLVLGTPEQRNLIVDELLAEGDGLKDLL----- 445
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR--PSIFT 248
D NYV+Q L + +++ ++ +L + GS + K + P+I
Sbjct: 446 ---LDSYANYVIQRALTVSSPAAQQQLLLAIQPCLSQLRQTQPGSRVAHKLVKKFPNILA 502
Query: 249 P 249
P
Sbjct: 503 P 503
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 57/291 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR------SMQ 94
IV + + GS F+Q+ L +F + + + LMTD +G ++ + SM
Sbjct: 842 IVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMD 901
Query: 95 KLIKL-------------------LVGSPCISLVISAAYRRFKDM-------MFSKEASS 128
+ + L ++ S+ I +++ + + +
Sbjct: 902 QKLALATRIRGHVLPLALQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVKDQNGNH 961
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 962 VVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQS 1021
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
E L +D GNYV+QHVL G KI S ++GK LS + S++VEK
Sbjct: 1022 TEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTHSSRT 1081
Query: 242 QRP---------------SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+R +++T + +Y N+V+Q+ + + + Q R II
Sbjct: 1082 ERALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1129
>gi|145535798|ref|XP_001453632.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421354|emb|CAK86235.1| unnamed protein product [Paramecium tetraurelia]
Length = 391
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 20/237 (8%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV L G+ +Q++L + IFE + + L + YGC +A QKL+++
Sbjct: 120 IVTLANDIFGNYVVQRILEQGNQQQRELIFEHLSQQILVLSYNTYGCRVA---QKLLEIS 176
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
+ + + ++++ + VI K E + Q+++ L + ++L+
Sbjct: 177 YNTQKFDQIFKLISMQVRNLVIDTNGNHVIQKIAELVKSQRSDWLIDGVLGQIQKLSNDS 236
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC + + + + + S E L GNY++Q +L G KI +
Sbjct: 237 HGCRLIQQILEVSSASQLNDIYMELLSIQEELCLSQYGNYIIQILLQRGPTDLIYKIQNA 296
Query: 221 LKGKFEELSLLRCGSHLVEK------YQRPSIFTPCQHK-----------YGNFVIQ 260
+ E+LS + GS++V+K Y R I H YGN+VIQ
Sbjct: 297 IIKNLEKLSCDKFGSNVVDKSVNISVYMRKQILKVFMHNMNIFYRLSNNCYGNYVIQ 353
>gi|302759032|ref|XP_002962939.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
gi|300169800|gb|EFJ36402.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
Length = 337
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
+V + GS F+Q+ L + +F+ V F LMTD +G ++ ++
Sbjct: 24 VVEFSADQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQ 83
Query: 92 SMQKLIKLLVGSPC-ISL------VISAAYR----------------RFKDMMFSKEASS 128
++L LLVG +SL VI A + + +
Sbjct: 84 QRRELANLLVGHMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVRDQNGNH 143
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE-MRGPRRGGLLDLISS 187
VI KC+E + K + + A L+TH GC + + ++ G+++ I
Sbjct: 144 VIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEEILG 203
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYV+QHVL G +I + L G+ ++S + S++VEK
Sbjct: 204 ATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEK 256
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 933 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 988
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 989 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1048
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1049 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1108
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1109 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1136
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 933 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 988
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 989 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1048
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1049 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1108
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1109 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1136
>gi|90265098|emb|CAH67711.1| H0512B01.6 [Oryza sativa Indica Group]
Length = 795
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + + L YGC R +QK+I ++ IS+V
Sbjct: 498 GNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGC---RVVQKVIDVVDLERKISIV 554
Query: 110 ---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
++ R D + + VI KC+E + E + + L TH GC +
Sbjct: 555 GELKNSVLRCISD----QNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVI 610
Query: 167 NNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ P + ++D I A L++D GNYVVQHVL G + I L G+
Sbjct: 611 QRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQV 670
Query: 226 EELSLLRCGSHLVEK 240
LS + S++VEK
Sbjct: 671 VNLSQQKYASNVVEK 685
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 48 EGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCIS 107
+ G+ +QK + + E + + + L T YGC R +Q++++ S
Sbjct: 568 QNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGC---RVIQRVLEHCHNPATQS 624
Query: 108 LVISAAYRRFKDMMFSKEASSVIIKCLET-LDEQKNEVLY-----LAAMNHFRELATHVR 161
V+ R D+ K + V+ LE E+++ ++ + ++ + + V
Sbjct: 625 AVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVE 684
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICS 219
C+S R G + +++SS F L KD GNYVVQ +L D K+ I S
Sbjct: 685 KCLSFG-----TPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILS 739
Query: 220 LLKGKFEELSLLRCGSHLVEKYQR 243
+K EL G H+V + ++
Sbjct: 740 SIKMHLNELKNYTFGKHIVARVEK 763
>gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|23200484|pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|24159005|pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159006|pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159011|pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159012|pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159015|pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|24159016|pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|326327989|pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327990|pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327993|pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327994|pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327997|pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326327998|pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328001|pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328002|pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328005|pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
gi|326328006|pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 26/240 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 71 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 127
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 128 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 186
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 187 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 246
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 247 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 306
>gi|401427766|ref|XP_003878366.1| putative pumilio protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494614|emb|CBZ29916.1| putative pumilio protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 842
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G +T+ E + + +L YGC R +QK I+++ + + +
Sbjct: 456 GNYVLQKLLDKGNTPQLTFAA-ERMCGHVVELTMQTYGC---RVIQKCIEVMPEA-GLDI 510
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+++ + + + VI KC+E + Q+ + A ELATH GC +
Sbjct: 511 ILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGCRVIQC 569
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL-GLGDLKYSEKICSLLKGKFEE 227
+ + + + + + L+KD GNYV+QHVL + D E + + LK KF
Sbjct: 570 IMQHCP-EQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFY 628
Query: 228 LSLLRCGSHLVEK-YQRPS 245
LS + S+++EK Y R S
Sbjct: 629 LSKQKFASNVMEKLYARSS 647
>gi|255648502|gb|ACU24710.1| pumilo [Bombyx mori]
Length = 309
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + + + V + +L YGC + + + I + +
Sbjct: 64 GNYVIQKFFEFGTTEQKTTLAQKVRGHVLNLALQMYGCRVIQKALESIPPEQQQEVVREL 123
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ KD + + V+ KC+E ++ + + A L+TH GC +
Sbjct: 124 DGHVLKCVKD----QNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRI 179
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + +H + L D GNYVVQHVL G + ++ + ++GK +LS
Sbjct: 180 LEHCTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLS 239
Query: 230 LLRCGSHLVEK 240
+ S++VEK
Sbjct: 240 QHKFASNVVEK 250
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 933 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 988
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 989 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1048
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1049 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1108
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1109 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1136
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 927 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 982
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 983 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1042
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1043 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1102
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1103 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1130
>gi|302853691|ref|XP_002958359.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300256312|gb|EFJ40581.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 345
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 29/246 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK L I +A++ + L YGC R +QK +++ + LV
Sbjct: 74 GNYVVQKFLEHGTPQHRACISKALHGHVLQLSLQMYGC---RVVQKALEVFTEDQQVDLV 130
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
S + + + VI KC+E + + L + L+TH GC +
Sbjct: 131 -SELDGHVMRCVRDQNGNHVIQKCIECVPTHRIAGLLDNFLMCVVPLSTHPFGCRIIQRI 189
Query: 170 INEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ +R RR ++ I A L++D GNYV+QHVL G + I L +L
Sbjct: 190 LEHVRDQRRRAAVMADILGAAVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSLSATVVQL 249
Query: 229 SLLRCGSHLVEKY------------------------QRPSIFTPCQHKYGNFVIQQALR 264
S+ + S+++EK +R + ++GN+V+Q+ L
Sbjct: 250 SMHKFASNVIEKCLIHGSTADRDLIINRMLGPLNISPKRGPWTAMIKDQFGNYVVQKVLE 309
Query: 265 VTKGFQ 270
V Q
Sbjct: 310 VCTDVQ 315
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 927 GNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 983
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 984 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 1042
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 1043 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 1102
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 1103 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1162
Query: 268 GFQ 270
Q
Sbjct: 1163 PGQ 1165
>gi|332017050|gb|EGI57849.1| Maternal protein pumilio [Acromyrmex echinatior]
Length = 630
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++
Sbjct: 268 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTQE 327
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ +G ++ + + +
Sbjct: 328 QKSTLAQKVRGHVLPLALQMYGCRVIQKALES-IGPEQQQEIVRELDGHVLKCVKDQNGN 386
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E ++ + + + A L+TH GC + + + G+L + +
Sbjct: 387 HVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGILQELHA 446
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 447 ATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEK 499
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis florea]
Length = 1240
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 61/286 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++ +QK +
Sbjct: 882 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYV---IQKFFEF- 937
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
G+P V+ A + + + K S
Sbjct: 938 -GTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKD 996
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E ++ + + + A L+TH GC + + + G+L
Sbjct: 997 QNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQ 1056
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 1057 ELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVT 1116
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ + V + Q
Sbjct: 1117 HATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ 1162
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 61/286 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++ +QK +
Sbjct: 882 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYV---IQKFFEF- 937
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
G+P V+ A + + + K S
Sbjct: 938 -GTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKD 996
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E ++ + + + A L+TH GC + + + G+L
Sbjct: 997 QNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQ 1056
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 1057 ELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVT 1116
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ + V + Q
Sbjct: 1117 HATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ 1162
>gi|356542325|ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1033
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + VI KC+E + E
Sbjct: 782 YGC---RVIQKAIEVVDLDQKIEMVQELDGNVMRCVRD----QNGNHVIQKCIECVPEDA 834
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
+ + L+TH GC + + + P + ++D I L++D GNY
Sbjct: 835 IHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNY 894
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 895 VVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNVVEK 934
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 935 YGC---RVIQKALEFIPPDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 990
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 991 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQH 1050
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1051 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGP 1110
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1111 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1138
>gi|242063522|ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK T T ++ + Y L YGC + + +++++ + +
Sbjct: 715 GNYVIQKFFEYGTETQTKQLATLLKGYVLQLSLQMYGCRVIQKALEVVEVEQQTQMALEL 774
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ R +D + + VI KC+E + +++ + A H EL+ H GC +
Sbjct: 775 DGSIMRCVRD----QNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRV 830
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + +++ I L++D GNYV+QHVL G + I + L G+ ++
Sbjct: 831 LEHCDDESTQNAMMEEIMQSVVTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKM 890
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 891 SQQKFASNVVEK 902
>gi|115457242|ref|NP_001052221.1| Os04g0201200 [Oryza sativa Japonica Group]
gi|38345179|emb|CAE03335.2| OSJNBb0005B05.2 [Oryza sativa Japonica Group]
gi|113563792|dbj|BAF14135.1| Os04g0201200 [Oryza sativa Japonica Group]
Length = 795
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + + L YGC R +QK+I ++ IS+V
Sbjct: 498 GNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGC---RVVQKVIDVVDLERKISIV 554
Query: 110 ---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
++ R D + + VI KC+E + E + + L TH GC +
Sbjct: 555 GELKNSVLRCISD----QNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVI 610
Query: 167 NNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ P + ++D I A L++D GNYVVQHVL G + I L G+
Sbjct: 611 QRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQV 670
Query: 226 EELSLLRCGSHLVEK 240
LS + S++VEK
Sbjct: 671 VNLSQQKYASNVVEK 685
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 69 IFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
+ E + + + L T YGC R +Q++++ S V+ R D+ K +
Sbjct: 589 VIEDILQKIYPLCTHQYGC---RVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNY 645
Query: 129 VIIKCLET-LDEQKNEVLY-----LAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
V+ LE E+++ ++ + ++ + + V C+S R G +
Sbjct: 646 VVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFG-----TPDEREGLIR 700
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+++SS F L KD GNYVVQ +L D K+ I S +K EL G H+V +
Sbjct: 701 EIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVAR 760
Query: 241 YQR 243
++
Sbjct: 761 VEK 763
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 61/286 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++ +QK +
Sbjct: 883 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYV---IQKFFEF- 938
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
G+P V+ A + + + K S
Sbjct: 939 -GTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKD 997
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E ++ + + + A L+TH GC + + + G+L
Sbjct: 998 QNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQ 1057
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 1058 ELHAATDQLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQHKFASNVVEKCVT 1117
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ + V + Q
Sbjct: 1118 HATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ 1163
>gi|358377871|gb|EHK15554.1| hypothetical protein TRIVIDRAFT_165243 [Trichoderma virens Gv29-8]
Length = 308
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 49/260 (18%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH----------------LARSM 93
GS F+Q+ L +S ++F + LM D +G + LA M
Sbjct: 38 GSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYGSQLQKKILAEKM 97
Query: 94 Q-KLIKLLVGSPCISLVISA-------------------AYRRFKDMMFSKEASSVIIKC 133
+ K++ L V +V A R KD + + V+ K
Sbjct: 98 KGKVVDLSVQVYACRVVQKALEHILVEQQAELTRELEPEILRVIKD----QNGNHVVQKI 153
Query: 134 LETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLS 193
+E + Q + + A LA+H GC + + + ++ + + A+ L
Sbjct: 154 IELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQILI 213
Query: 194 KDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQRPSIFTPC 250
D GNYV QHV+ G+ + E+I L+ G+ LS + S++VEK Y P+ T
Sbjct: 214 TDQYGNYVAQHVIQNGEPEDRERIIQLVMGQLLTLSKHKFASNVVEKCIEYGTPAQRTTI 273
Query: 251 QHKY------GNFVIQQALR 264
+ + GN +QQ +R
Sbjct: 274 REQLTTTGADGNNPLQQMMR 293
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 61/286 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++ +QK +
Sbjct: 882 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYV---IQKFFEF- 937
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
G+P V+ A + + + K S
Sbjct: 938 -GTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKD 996
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E ++ + + + A L+TH GC + + + G+L
Sbjct: 997 QNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQ 1056
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 1057 ELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVT 1116
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ + V + Q
Sbjct: 1117 HATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ 1162
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 61/286 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++ +QK +
Sbjct: 881 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYV---IQKFFEF- 936
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
G+P V+ A + + + K S
Sbjct: 937 -GTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKD 995
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E ++ + + + A L+TH GC + + + G+L
Sbjct: 996 QNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQ 1055
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + + L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 1056 ELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVT 1115
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ ++ + +Y N+V+Q+ + V + Q
Sbjct: 1116 HATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ 1161
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 935 YGC---RVIQKALEFIPPDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 990
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 991 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQH 1050
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1051 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGP 1110
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1111 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1138
>gi|194377510|dbj|BAG57703.1| unnamed protein product [Homo sapiens]
Length = 1127
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 874 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 929
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 930 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 989
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 990 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1049
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1050 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1077
>gi|297282790|ref|XP_002802328.1| PREDICTED: pumilio homolog 1 [Macaca mulatta]
gi|332808253|ref|XP_003307983.1| PREDICTED: pumilio homolog 1 [Pan troglodytes]
gi|397515867|ref|XP_003828163.1| PREDICTED: pumilio homolog 1 isoform 4 [Pan paniscus]
gi|402853683|ref|XP_003891520.1| PREDICTED: pumilio homolog 1 isoform 3 [Papio anubis]
Length = 1127
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 874 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 929
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 930 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 989
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 990 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1049
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1050 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1077
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 965 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 1020
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 1021 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1080
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1081 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1140
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1141 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1168
>gi|403293276|ref|XP_003937646.1| PREDICTED: pumilio homolog 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1127
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 874 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 929
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 930 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 989
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 990 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1049
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1050 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1077
>gi|390465605|ref|XP_002750597.2| PREDICTED: pumilio homolog 1 isoform 1 [Callithrix jacchus]
Length = 1129
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 876 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 931
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 932 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 991
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 992 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1051
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1052 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1079
>gi|330797119|ref|XP_003286610.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
gi|325083435|gb|EGC36888.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
Length = 332
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ LQK + + + + + L YGC R +QK I+ + I L+
Sbjct: 57 GNYVLQKFFEHGTTEQKRILADKLSGHILSLTLQMYGC---RVIQKAIESIELDKQI-LL 112
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I + + + VI KC+E + + + + H +LATH GC +
Sbjct: 113 IGELNGHIVQCVTDQNGNHVIQKCIEKIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRI 172
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +LD + A L +D GNYV+QHVL G + I L+G+ LS
Sbjct: 173 LEHCAESQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLS 232
Query: 230 LLRCGSHLVEK 240
+ S+++EK
Sbjct: 233 QHKFASNVIEK 243
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 933 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 988
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 989 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1048
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1049 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1108
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1109 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1136
>gi|405977786|gb|EKC42220.1| Pumilio-like protein 2 [Crassostrea gigas]
Length = 1012
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
+V + + GS F+Q+ L +F + + + LMTD +G ++
Sbjct: 678 VVEFSQDQHGSRFIQQKLERASPQEKNVVFNEILAHAYSLMTDVFGNYVIQKFFEFGSNE 737
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ + + +V K + + +
Sbjct: 738 QKQTLAQRLRGHVLPLALQMYGCRVIQKALETIPSDLQVEIVKELDGHVVK-CVKDQNGN 796
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E +D + + A L+TH GC + + + +L+ +
Sbjct: 797 HVVQKCIECVDPIHLQFIIDAFKGQVLALSTHPYGCRVIQRILEHCTKEQITPILEELHQ 856
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
E L +D GNYVVQHVL G KI + ++GK LS + S++VEK
Sbjct: 857 TTERLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFASNVVEK 909
>gi|359486781|ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ + + + L YGC + + +++ L + + +
Sbjct: 730 GNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMEL 789
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + + L+TH GC +
Sbjct: 790 DGNVMRCVRD----QNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRV 845
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ ++D I L++D GNYVVQHVL G I + L G+ ++
Sbjct: 846 LEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQM 905
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 906 SQQKFASNVVEK 917
>gi|178847547|pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847548|pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847550|pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
gi|178847551|pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 26/240 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 71 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 127
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 128 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 186
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D GNYV+QHVL G + KI + ++G LS
Sbjct: 187 LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 246
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 247 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 306
>gi|403339467|gb|EJY68995.1| hypothetical protein OXYTRI_10388 [Oxytricha trifallax]
Length = 840
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%)
Query: 143 EVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVV 202
+ ++ A +N E+ +H GC + + + R ++ L D+I + L +DP GNY+V
Sbjct: 525 QFIFDACINDCIEIGSHKHGCCVMQRCLEKGREVQKLALADVIIYNLHSLIEDPYGNYLV 584
Query: 203 QHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
Q+VL L ++ +++I ++ F LS L+ S+++EK
Sbjct: 585 QNVLKLNNVDRNDQIFQMIGSDFIRLSQLKFSSNVIEK 622
>gi|390179099|ref|XP_002137873.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859712|gb|EDY68431.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 907
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 483 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYV---IQKFFEF- 538
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 539 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 597
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 598 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 657
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 658 ELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 717
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 718 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 764
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 933 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 988
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 989 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1048
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1049 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1108
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1109 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1136
>gi|449273163|gb|EMC82771.1| Pumilio like protein 1, partial [Columba livia]
Length = 987
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 802 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 861
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-- 241
+ H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 862 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 921
Query: 242 --------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 922 HASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 970
>gi|449708558|gb|EMD47999.1| pumilio, putative, partial [Entamoeba histolytica KU27]
Length = 499
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 112/292 (38%), Gaps = 57/292 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D V + K GS +Q+ + KI+ + ++ +L +D + ++ +QK I+
Sbjct: 184 DYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYV---IQKAIEF 240
Query: 100 LVGSP--------------------CISLVISAAYRRFKD--MMF------------SKE 125
+ S C + + Y KD ++F +
Sbjct: 241 IPESRHIVPQKMKGNVLRLTLHMYGCRVVQKAVEYASMKDRRLLFEELRKSLVRCIEDQN 300
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI KC+E D Q + A E H GC + I + LL +I
Sbjct: 301 GNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVI 360
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H+ L++D GNYVVQ+VL G I +KG LS+ + S+++EK
Sbjct: 361 EPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFA 420
Query: 241 ------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
YQ I Q ++ N+V+Q ++ + +ER I EL
Sbjct: 421 TQNERQQILEEIYQNNGILQMMQDQFANYVVQ---KIIEAIDSSEREKIVEL 469
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 931 YGC---RVIQKALEFIPPDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 986
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 987 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQH 1046
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1047 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGP 1106
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1107 HSALYTMMKDQYANYVVQKMIDVAEPAQ 1134
>gi|168030344|ref|XP_001767683.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681003|gb|EDQ67434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1085
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + + +S + R +D + + VI KC+E + K
Sbjct: 886 YGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVRD----QNGNHVIQKCIECVPPAKIHF 941
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQ 203
+ A N L+TH GC + + ++ G+++ I L++D GNYVVQ
Sbjct: 942 IISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQ 1001
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQHKYGNFVIQQAL 263
HVL G +I + L G+ ++S + S++VEK C +YG V +Q L
Sbjct: 1002 HVLEHGRDHERSEIITKLAGQIVQMSQHKFASNVVEK---------C-LEYGGPVERQIL 1051
Query: 264 RVTKGFQMTERN----IIQELGQSSFIQGIV 290
+ + +T+ N ++ EL +S + G V
Sbjct: 1052 -IDEMLGLTDENEPLQVLCELSSNSLVSGWV 1081
>gi|356538980|ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + VI KC+E + E
Sbjct: 796 YGC---RVIQKAIEVVDLDQKIEMVQELDGNVMRCVRD----QNGNHVIQKCIECVPEDA 848
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
+ + + L+TH GC + + P + ++D I L++D GNY
Sbjct: 849 IDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCEDPTTQQKVMDEILGAVSMLAQDQYGNY 908
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 909 VVQHVLEHGKSHERSSIIKELAGKIVQMSQQKFASNVVEK 948
>gi|183233559|ref|XP_655386.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801513|gb|EAL49999.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 528
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 112/292 (38%), Gaps = 57/292 (19%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D V + K GS +Q+ + KI+ + ++ +L +D + ++ +QK I+
Sbjct: 213 DYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYV---IQKAIEF 269
Query: 100 LVGSP--------------------CISLVISAAYRRFKD--MMF------------SKE 125
+ S C + + Y KD ++F +
Sbjct: 270 IPESRHIVPQKMKGNVLRLTLHMYGCRVVQKAVEYASMKDRRLLFEELRKSLVRCIEDQN 329
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI KC+E D Q + A E H GC + I + LL +I
Sbjct: 330 GNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVI 389
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
H+ L++D GNYVVQ+VL G I +KG LS+ + S+++EK
Sbjct: 390 EPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFA 449
Query: 241 ------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
YQ I Q ++ N+V+Q ++ + +ER I EL
Sbjct: 450 TQNERQQILEEIYQNNGILQMMQDQFANYVVQ---KIIEAIDSSEREKIVEL 498
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 969 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 1024
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 1025 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1084
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1085 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1144
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1145 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1172
>gi|320581830|gb|EFW96049.1| Member of the PUF protein family [Ogataea parapolymorpha DL-1]
Length = 548
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 56/277 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLS---GKDSTITYKIFEAVYKYPFDLMTDGYGCHL------- 89
DI+ L K + G FLQK + GK+ + IF+ V+++ +LM D +G +L
Sbjct: 205 DILALSKDQFGCRFLQKKIDEDFGKNYPL---IFKEVHQHSIELMMDPFGNYLIQKIILN 261
Query: 90 --------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS 123
R+ QKLI L + L+ + +++
Sbjct: 262 ASAEELKLILTNIAPLIHTICRNQHGTRACQKLIDCLSTTGHYRLLQNCLTPHVVNLIQD 321
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ V+ KC+ + + + N+ +++TH GC L +N + L
Sbjct: 322 LNGNHVVQKCIAKFQNDDLQFIIDSICNNIVKISTHKHGCCVLQKLLNRCNHQQVLQLGS 381
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
I +++ L +D GNYVVQ ++ L + ++ ++ +LS + S++VEK +
Sbjct: 382 EIVANSYQLMQDQFGNYVVQFLISLDIPSLNSELVKIMVPFINDLSTQKFSSNVVEKCLK 441
Query: 244 PSI---FTP--------------CQHKYGNFVIQQAL 263
F P + ++GN+V+Q A+
Sbjct: 442 IKFDQGFNPLVDALLQPQVLGVLVKDQFGNYVVQTAM 478
>gi|330933813|ref|XP_003304306.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
gi|311319138|gb|EFQ87583.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-----QK 95
+V + GS F+Q+ L +S + +F + + LM D +G ++ + Q
Sbjct: 515 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQV 574
Query: 96 LIKLLVGSPCISLVISAAYRRFKDMMFSK-------EASSVIIKCLE-----TLDEQK-- 141
K+LVG V+ A + + + K E + ++K LE T+ +Q
Sbjct: 575 QKKILVGK-MKGHVLELANQMYACRVVQKALEHALTEQQAAMVKELEKDVLKTVKDQNGN 633
Query: 142 ---NEVLYLAAMNHFRELATHVRGCV---SLNNF--------INEMRGPRRGGLLDLISS 187
+V+ M H +++ RG V S+N++ + +++ P+R +L + +
Sbjct: 634 HVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVQEPQRRFILTELHA 693
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L D GNYV QHV+ G + KI SL+K +F S + S++VE+
Sbjct: 694 EGSKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFASNVVER 746
>gi|255544506|ref|XP_002513314.1| pumilio, putative [Ricinus communis]
gi|223547222|gb|EEF48717.1| pumilio, putative [Ricinus communis]
Length = 1004
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + + R D + + VI KC+E + E
Sbjct: 760 YGCRVIQKALEVIELDQKTQLVQELDGHVLRCVHD----QNGNHVIQKCIECVPTMNIEF 815
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A LATH GC + + + ++D I A L++D GNYV Q
Sbjct: 816 IISAFQGQVAALATHPYGCRVIQRVLEHCSDDLQSQCIVDEILESAYLLAQDQYGNYVTQ 875
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I S L GK ++S + S+++EK
Sbjct: 876 HVLERGKPYERSQIISKLTGKIVQMSQHKYASNVIEK 912
>gi|297822641|ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
gi|297325042|gb|EFH55462.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 973
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + V+ KC+E + E+
Sbjct: 720 YGC---RVIQKAIEVVDLDQKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEEN 772
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNY 200
E + H L+TH GC + + P + +++ I L++D GNY
Sbjct: 773 IEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILITVSMLAQDQYGNY 832
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 833 VVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEK 872
>gi|293331587|ref|NP_001169459.1| uncharacterized protein LOC100383330 [Zea mays]
gi|224029501|gb|ACN33826.1| unknown [Zea mays]
Length = 453
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ + + + +L YGC R +QK+++++ I +V
Sbjct: 157 GNYVIQKFFEFATERQLIQLADQLKGHILELSLQMYGC---RVVQKVLEVVDKDRKIDIV 213
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + VI KC+E + E + + ++ L TH GC +
Sbjct: 214 HELRNHILK-CIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRV 272
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + ++ I L+ D GNYVVQHVL G + I L G+ L
Sbjct: 273 LEHCHDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVIL 332
Query: 229 SLLRCGSHLVEK-------YQRPSIFTPC-----------QHKYGNFVIQQALR 264
S L+ S+++EK +R S+ + ++GN+V+Q+ L+
Sbjct: 333 SKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLK 386
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
++ISS F L KD GNYVVQ VL D +Y E I S +K EL G H+V +
Sbjct: 360 EIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHLNELKNYTYGKHIVTR 419
Query: 241 YQR 243
++
Sbjct: 420 VEK 422
>gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1287
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + + A L+TH GC + + + +L+
Sbjct: 1069 QNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 1128
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 1129 ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVT 1188
Query: 241 -----------------YQRP--SIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ P +++T + +Y N+V+Q+ + V + T+R I+
Sbjct: 1189 HASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVA---EPTQRKIV 1241
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ + +V K + + + V+ KC+E + Q +
Sbjct: 933 YGC---RVIQKALEFIPSDQQNEMVRELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQF 988
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A L+TH GC + + + +L+ + H E L +D GNYV+QH
Sbjct: 989 IIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQH 1048
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----------------------Q 242
VL G + KI + ++G LS + S++VEK
Sbjct: 1049 VLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGP 1108
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 1109 HSALYTMMKDQYANYVVQKMIDVAEPGQ 1136
>gi|393220554|gb|EJD06040.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 486
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 41/215 (19%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+ ++ S V R KD + VI K LE + ++
Sbjct: 220 YGC---RVVQKAIEFVLPEQQASFVKELEGHVLRCVKD----ANGNHVIQKLLERVSPER 272
Query: 142 NEVLYLAAMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
L + F+ EL+TH GC L M+ + LLD + + L +D
Sbjct: 273 -----LGFVQAFKGNVYELSTHPYGCRVLQRVFEHMKEEQTRPLLDELHKYTINLMQDQF 327
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSH----------------LVEKY 241
GNYVVQ VL G ++ I S L+G+ +++ + S+ LVE+
Sbjct: 328 GNYVVQFVLEHGPVQDRLLIISKLRGQMLQMAKHKFASNVCEKALVMADSENRRLLVEEM 387
Query: 242 QRPS------IFTPCQHKYGNFVIQQALRVTKGFQ 270
P I T + +Y N+V+Q+AL V +G Q
Sbjct: 388 ITPKADGVSPIVTMMKDQYANYVLQRALTVVEGDQ 422
>gi|241623171|ref|XP_002407532.1| pumilio, putative [Ixodes scapularis]
gi|215501007|gb|EEC10501.1| pumilio, putative [Ixodes scapularis]
Length = 188
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 156 LATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE 215
L+TH GC + + G + +L+ + H E L +D GNYVVQHVL G +
Sbjct: 5 LSTHPYGCRVIQRILEHCTGDQTCPVLEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDKN 64
Query: 216 KICSLLKGKFEELSLLRCGSHLVEK 240
KI ++++GK LS + S++VEK
Sbjct: 65 KIVNVVRGKVLPLSQHKFASNVVEK 89
>gi|302757830|ref|XP_002962338.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
gi|300169199|gb|EFJ35801.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
Length = 353
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------ARSMQKLIKLL 100
GS F+Q+ L + +F+ V F LMTD +G ++ ++ ++L LL
Sbjct: 4 GSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELANLL 63
Query: 101 VGSPC-ISL------VISAAYR----------------RFKDMMFSKEASSVIIKCLETL 137
VG +SL VI A + + + VI KC+E +
Sbjct: 64 VGHMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVRDQNGNHVIQKCIECV 123
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE-MRGPRRGGLLDLISSHAEFLSKDP 196
K + + A L+TH GC + + ++ G+++ I L++D
Sbjct: 124 PPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEEILGATCSLAQDQ 183
Query: 197 SGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
GNYV+QHVL G +I + L G+ ++S + S++VEK
Sbjct: 184 YGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEK 227
>gi|323457211|gb|EGB13077.1| hypothetical protein AURANDRAFT_52010 [Aureococcus anophagefferens]
Length = 613
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ D+ K++EA+ + L YGC R +QK + L P +L
Sbjct: 334 GNYVVQKVLTCGDADTKSKVYEALKGHCVALSLHVYGC---RVVQKALDAL--PPREALA 388
Query: 110 ISAAYRRFKDM-MFSKEASSVIIKCLETLDEQKNEVLYLAAM-NHFRELATHVRGCVSLN 167
+ +R + + + + VI KC + ++ LAA + R LATH GC L
Sbjct: 389 VIDEFRESVLLCVHDQNGNHVIQKCRDYAAFGESVDFVLAAFRGNARSLATHSYGCRVLQ 448
Query: 168 NFINEMRGPRRGGLLDLIS-SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
+ G LLD + + L +D NYV+QH + G K+ + +K
Sbjct: 449 RVLEHCGPEHTGPLLDELQLADLPPLIEDQYANYVMQHAIQYGRHSDKAKLLAAVKANLL 508
Query: 227 ELSLLRCGSHLVEK 240
+ S + S++VEK
Sbjct: 509 DFSRHKFASNVVEK 522
>gi|403333004|gb|EJY65564.1| Pumilio domain-containing protein [Oxytricha trifallax]
Length = 1075
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI-SL 108
G+ F Q +LS I A+ ++ D G H ++M +L+ L I
Sbjct: 747 GNYFCQSLLSSCSGEQRLSILRAIQPKFIEICCDRKGTHTIQTMFELVNLPEEEDFIRDA 806
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
++ R KD + + V+ K + + E K +Y + F ELA + G +
Sbjct: 807 LMGNVIRLSKD----PQGTHVVQKVMASFPEHKRAFIYEEVFDQFIELAKNNNGLCVVKK 862
Query: 169 FINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC----SLLKG 223
+ + + L+ + +A L +DP GNY V ++ +K+ ++C +L+
Sbjct: 863 LVQFTKNTDQAVILMKRLQENAIDLVQDPFGNYAVTEIV----VKWEPEVCRPIFEVLRS 918
Query: 224 KFEELSLLRCGSHLVEK-YQRPS----------------IFTPCQHKYGNFVIQQALRVT 266
+ +LS + S+++EK +R + + +++YGN+V+Q+AL+++
Sbjct: 919 RISQLSSQKFSSNVIEKCLERADEQMRAGLIVELAYSDRLTSLIRNQYGNYVVQKALKLS 978
Query: 267 KG 268
G
Sbjct: 979 LG 980
>gi|158828234|gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
Length = 975
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + V+ KC+E + E+
Sbjct: 722 YGC---RVIQKAIEVVDLDQKIKMVKELDGHVMRCVRD----QNGNHVVQKCIECVPEEN 774
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
E + + L+TH GC + + P + +++ I S L++D GNY
Sbjct: 775 IEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEIMSTVSMLAQDQYGNY 834
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
V+QHVL G I L GK ++S + S++VEK
Sbjct: 835 VIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEK 874
>gi|413924047|gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK T T ++ + + L YGC + + +++++ + +
Sbjct: 719 GNYVIQKFFEYGTETQTKQLATLLKGFVLQLSLQMYGCRVIQKALEVVEVEQQTQMALEL 778
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ R +D + + VI KC+E + +++ + A H EL+ H GC +
Sbjct: 779 DGSIMRCVRD----QNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRI 834
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + +++ I L++D GNYV+QHVL G + I + L G+ ++
Sbjct: 835 LEHCDDESTQNAMMEEIMQSVVTLTEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKM 894
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 895 SQQKFASNVVEK 906
>gi|189195550|ref|XP_001934113.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979992|gb|EDU46618.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 891
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-----QK 95
+V + GS F+Q+ L +S + +F + + LM D +G ++ + Q
Sbjct: 516 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQV 575
Query: 96 LIKLLVGSPCISLVISAAYRRFKDMMFSK-------EASSVIIKCLE-----TLDEQK-- 141
K+LVG V+ A + + + K E + ++K LE T+ +Q
Sbjct: 576 QKKILVGK-MKGHVLELANQMYACRVVQKALEHALTEQQAAMVKELEKDVLKTVKDQNGN 634
Query: 142 ---NEVLYLAAMNHFRELATHVRGCV---SLNNF--------INEMRGPRRGGLLDLISS 187
+V+ M H +++ RG V S+N++ + +++ P+R +L + +
Sbjct: 635 HVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVQEPQRRFILTELHA 694
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L D GNYV QHV+ G + KI SL+K +F S + S++VE+
Sbjct: 695 EGPKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFASNVVER 747
>gi|413917932|gb|AFW57864.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 658
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ + + + +L YGC R +QK+++++ I +V
Sbjct: 358 GNYVIQKFFEFATERQLIQLADQLKGHILELSLQMYGC---RVVQKVLEVVDKDRKIDIV 414
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + VI KC+E + E + + ++ L TH GC +
Sbjct: 415 HELRNHILK-CIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRV 473
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + ++ I L+ D GNYVVQHVL G + I L G+ L
Sbjct: 474 LEHCHDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVIL 533
Query: 229 SLLRCGSHLVEK-------YQRPSIFTPC-----------QHKYGNFVIQQALRV 265
S L+ S+++EK +R S+ + ++GN+V+Q+ L+
Sbjct: 534 SKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLKT 588
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
++ISS F L KD GNYVVQ VL D +Y E I S +K EL G H+V +
Sbjct: 561 EIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHLNELKNYTYGKHIVTR 620
Query: 241 YQR 243
++
Sbjct: 621 VEK 623
>gi|116207968|ref|XP_001229793.1| hypothetical protein CHGG_03277 [Chaetomium globosum CBS 148.51]
gi|88183874|gb|EAQ91342.1| hypothetical protein CHGG_03277 [Chaetomium globosum CBS 148.51]
Length = 819
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 36/234 (15%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + S F+Q+ L +S ++F + LM D +G +
Sbjct: 441 VVEFSGDQQASRFIQQKLETANSDERDQVFAEIEPNAVQLMKDVFGNYVMQKLFEYGDQV 500
Query: 89 ----LARSMQKLIKLLVGSPCISLVISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
LA +M+ + L P V+ A+ + KE S +IK + D+
Sbjct: 501 QKKVLANAMKGKVVDLSMQPYACRVVQKAFEHILVDQQTELVKELESEVIKVAK--DQHG 558
Query: 142 NEVLY--------------LAAMN-HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ +A +N H ELA H GC + + + ++ +
Sbjct: 559 NHVIQQAIVLVPREHIDCMMAGLNGHIYELAAHQYGCRVVQRVLERGTETDKAAVMSELH 618
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
AE L D GNYV+QHVL G + ++ S++ + LS + S++VEK
Sbjct: 619 DSAELLITDMYGNYVIQHVLEKGRPEDRGRMISVITPQLLTLSRHKNASNVVEK 672
>gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]
Length = 322
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ + V+ KC+E +D + + A L+TH GC + + + +L
Sbjct: 173 DQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAPIL 232
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ + H E L +D GNYV+QHVL G + +I ++GK LS + S++VEK
Sbjct: 233 EELHRHTEQLIQDQYGNYVIQHVLEHGKPEDKSQIILSVRGKVLVLSQHKFASNVVEK 290
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 90/240 (37%), Gaps = 59/240 (24%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + G F+Q+ L +F + ++LMTD +G ++ +QK +
Sbjct: 59 IVEFSQDQHGPRFIQQKLERATVAEKQMVFSEILAAAYNLMTDVFGNYV---IQKFFEF- 114
Query: 101 VGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLETLD-EQKNEVLYLAAMNHFRELAT 158
G+P ++ R + VI + LE++ EQ+ E++ REL
Sbjct: 115 -GTPEQKTTLAQKVRGHVLPLALQMYGCRVIQRALESISPEQQEEIV--------RELDG 165
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
HV CV KD +GN+VVQ + D + I
Sbjct: 166 HVLKCV-----------------------------KDQNGNHVVQKCIECVDPHALQFII 196
Query: 219 SLLKGKFEELSLLRCGSHLVEK---YQRPSIFTP------------CQHKYGNFVIQQAL 263
+ G+ LS G ++++ + P P Q +YGN+VIQ L
Sbjct: 197 NAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAPILEELHRHTEQLIQDQYGNYVIQHVL 256
>gi|413917933|gb|AFW57865.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 654
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ + + + +L YGC R +QK+++++ I +V
Sbjct: 358 GNYVIQKFFEFATERQLIQLADQLKGHILELSLQMYGC---RVVQKVLEVVDKDRKIDIV 414
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + VI KC+E + E + + ++ L TH GC +
Sbjct: 415 HELRNHILK-CIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRV 473
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + ++ I L+ D GNYVVQHVL G + I L G+ L
Sbjct: 474 LEHCHDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVIL 533
Query: 229 SLLRCGSHLVEK-------YQRPSIFTPC-----------QHKYGNFVIQQALRV 265
S L+ S+++EK +R S+ + ++GN+V+Q+ L+
Sbjct: 534 SKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLKT 588
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
++ISS F L KD GNYVVQ VL D +Y E I S +K EL G H+V +
Sbjct: 561 EIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHLNELKNYTYGKHIVTR 620
Query: 241 YQR 243
++
Sbjct: 621 VEK 623
>gi|428168220|gb|EKX37168.1| hypothetical protein GUITHDRAFT_89808 [Guillardia theta CCMP2712]
Length = 505
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 108/292 (36%), Gaps = 62/292 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG-------------- 86
I L + + G FLQK L IF V + DLMTD +G
Sbjct: 42 IFSLSRDQLGCRFLQKQLEENTQMSLDIIFSEVIERIVDLMTDPFGNYLCQKLLDYCNPE 101
Query: 87 -------------------CHLARSMQKLIKLLVGSP--CISLVISAAYRRFK----DMM 121
H R+ QKLI+ L GS I A K ++
Sbjct: 102 QRAAIVSRVAPHLVPISLNIHGTRAAQKLIERL-GSDHYPTEAEIQAVVNHLKGGVIQLI 160
Query: 122 FSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGL 181
+ V+ +CL+ LD + N+ +Y A H +A+H GC ++ ++ +
Sbjct: 161 QDLNGNHVVQRCLQKLDAKHNQFIYDAVAQHCILVASHRHGCCVFQRCVDFATPEQKHQV 220
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLG-----LGDLKYSEKICSLLKGKFEELSLLRCGSH 236
+ + L +D GNYVVQ+VL L S + + + + S+
Sbjct: 221 VMQVVEKTVQLVQDQYGNYVVQYVLEQVTFLLLVCASSHSPPTYQVPAYRPNIVQKFSSN 280
Query: 237 LVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+VEK Q+ I + Q Y N+VIQ+AL+V Q+
Sbjct: 281 VVEKCLQLASPEGQALMVTQLAQKEQILSLLQDPYANYVIQRALQVATSPQL 332
>gi|401886820|gb|EJT50837.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
2479]
Length = 677
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 54/271 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
I + GS F+Q L K+FE + F LMTD +G ++ A
Sbjct: 294 ICEFASDQHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAA 353
Query: 92 SMQKLIKLLVGSP---------CISLVISAAYRRFKDMM-FSKEASSVIIKCLE------ 135
LIK + G C + + + R +D E II+C++
Sbjct: 354 QKAALIKKMEGQALFLSNHMYGCRVMQTALEHARTEDRAKLVAELDGHIIECVKSSNANH 413
Query: 136 ------TLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
TLD + A + H REL+TH GC L + + LLD + + +
Sbjct: 414 VIQRLITLDPPRG--FMDAFIGHVRELSTHPFGCRVLQKSFEVLPPEKIRPLLDEMHTCS 471
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP 249
L + GNYVVQ V+ G+ + ++ ++ + K IF
Sbjct: 472 HELMINQFGNYVVQSVITEGEGRKHDRDLAVAEIKTR-------------------IFDL 512
Query: 250 CQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
C+HK+ + V+++AL+ +R +I E+
Sbjct: 513 CRHKFASNVVEKALK--HANPADKRELISEM 541
>gi|347970899|ref|XP_318367.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|347970901|ref|XP_003436659.1| AGAP003914-PC [Anopheles gambiae str. PEST]
gi|333469538|gb|EAA13588.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|333469540|gb|EGK97333.1| AGAP003914-PC [Anopheles gambiae str. PEST]
Length = 869
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A N L+TH GC + + + +L
Sbjct: 544 QNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPILA 603
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ ++ E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 604 ELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVT 663
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ + + +Y N+V+Q+ + V+ + T+R ++
Sbjct: 664 HATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVS---EPTQRKVL 713
>gi|167535571|ref|XP_001749459.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772087|gb|EDQ85744.1| predicted protein [Monosiga brevicollis MX1]
Length = 995
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 40/280 (14%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L+ S + + + + L + YGC R +Q LI++L + +
Sbjct: 702 GNYLMQKLLTDSPSPQRSLLVQQLEQSVETLAYNQYGC---RVLQCLIEVLPSAQREEMT 758
Query: 110 ISAAYRRFKDM------MFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGC 163
R KD + + A+ VI KC+ LD + + A M L++H C
Sbjct: 759 ----KRLLKDTETLLACIRDQHANHVIQKCIFHLDSASVDQIINACMQEGINLSSHAYAC 814
Query: 164 VSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKG 223
+ + R L I S E L+ P GNYV+Q +L + + I +
Sbjct: 815 RVIQRLFEHVPRDRLRNLRTHILSATEQLAYSPFGNYVLQVILQAQHEEDVQLIMKYIHT 874
Query: 224 KFEELSLLRCGSHLVEKYQR---------------------PSIFTPCQ----HKYGNFV 258
+ + +S+ + S++VEK R P+ +TP +YGNFV
Sbjct: 875 RVQPMSMHKYASNVVEKSLRASSREQLATILNEVLTPSPSQPANYTPLSVMMTDQYGNFV 934
Query: 259 IQQALRVTKGFQMTERNIIQELGQSSFIQGIVPFNFHVVS 298
+ L + Q + +IQ + F F HV++
Sbjct: 935 VGVMLELAPEAQRLQ--MIQMIEMHRFQLKTSSFGKHVIA 972
>gi|347836748|emb|CCD51320.1| similar to pumilio domain-containing protein [Botryotinia
fuckeliana]
Length = 964
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 29/252 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + + E + + +L YGC R +QK ++ ++ LV
Sbjct: 609 GNYVIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGC---RVVQKALEHVLADQQAELV 665
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ K +E + + + + A LATH GC +
Sbjct: 666 KELEADVLK-CVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRI 724
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + + +L+ + A L D GNYV QHV+ G + KI ++ + LS
Sbjct: 725 LEYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLS 784
Query: 230 LLRCGSHLVEKY-------QRPSIF-----------TPCQ----HKYGNFVIQQALRVTK 267
+ S++VEK QR +I +P Q +YGN+VIQ+ L K
Sbjct: 785 KHKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLK 844
Query: 268 GFQMTERNIIQE 279
G ERN E
Sbjct: 845 G---AERNAFVE 853
>gi|154298974|ref|XP_001549908.1| hypothetical protein BC1G_11734 [Botryotinia fuckeliana B05.10]
Length = 964
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 29/252 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + + E + + +L YGC R +QK ++ ++ LV
Sbjct: 609 GNYVIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGC---RVVQKALEHVLADQQAELV 665
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ K +E + + + + A LATH GC +
Sbjct: 666 KELEADVLK-CVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRI 724
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + + +L+ + A L D GNYV QHV+ G + KI ++ + LS
Sbjct: 725 LEYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLS 784
Query: 230 LLRCGSHLVEKY-------QRPSIF-----------TPCQ----HKYGNFVIQQALRVTK 267
+ S++VEK QR +I +P Q +YGN+VIQ+ L K
Sbjct: 785 KHKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLK 844
Query: 268 GFQMTERNIIQE 279
G ERN E
Sbjct: 845 G---AERNAFVE 853
>gi|170088350|ref|XP_001875398.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650598|gb|EDR14839.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 380
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 33/284 (11%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D + L + G+ +QKM+ S + + F L YGC R +QK I+
Sbjct: 88 DPLALVQDVFGNYVIQKMIEYGTSLQRSILTTVMEGNIFRLSLQMYGC---RVIQKAIEH 144
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMN-HFRELAT 158
+ SL+++ R + + + V+ + +E + + + ++A+ + +L+
Sbjct: 145 -ISLEQQSLIVAELEPRILECVRDSNGNHVVQRLIEKVPSDR--LSFVASFQGNVYDLSR 201
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
H GC L + + + L+D + +A L KD GNYV+Q ++ G + I
Sbjct: 202 HPYGCRVLQRCLEHLPEEQTRTLVDELHQNAVDLMKDQFGNYVIQFLVEHGQARDRALIV 261
Query: 219 SLLKGKFEELSLLRCGSHLVEK--------YQR----------PSIFTPC----QHKYGN 256
S L+GK +S + S++ EK +R P TP Q ++ N
Sbjct: 262 SNLQGKLLPMSRHKFASNVCEKALICADPQTRRALIDEMLAIAPETITPIMTMMQDQFAN 321
Query: 257 FVIQQALRVTKGFQMTE--RNIIQELGQSSFIQGIVPFNFHVVS 298
+V+Q+AL V +G Q E + Q+L + + +V + HVVS
Sbjct: 322 YVLQRALLVAEGDQREELFNTVRQQLVNTRRVSAVV--SKHVVS 363
>gi|426328691|ref|XP_004025383.1| PREDICTED: uncharacterized protein LOC101137767 [Gorilla gorilla
gorilla]
Length = 451
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL 182
+ + V+ KC+E + Q + + A L+TH GC + + + +L
Sbjct: 15 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 74
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY- 241
+ + H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 75 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 134
Query: 242 ---------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 135 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ 184
>gi|392566810|gb|EIW59985.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 378
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 58/286 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSM------ 93
IV + GS F+Q+ L S IF E V +Y LM D +G ++ + M
Sbjct: 26 IVEFSGDQHGSRFIQQKLESATSEEMEIIFDEIVPQYAIQLMQDVFGNYVVQKMFEYGTS 85
Query: 94 ---QKLIKLLVGSPC-ISL------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQ 140
+L+ + G +SL V+ A + ++F +E +++C++ D
Sbjct: 86 AQKARLVATMEGQILGLSLQMYGCRVVQKAIEHILPEQQVLFVQELGPNVLRCVK--DAN 143
Query: 141 KNEVLY----------LAAMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ LA + FR +L+TH GC L M + LLD +
Sbjct: 144 GNHVIQKLIEHVAPDRLAFVTAFRGSVYDLSTHPYGCRVLQRCFEYMPEDQTRPLLDELH 203
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY---QR 243
+ L D GNYVVQ VL G + I S L G+ ++ + S++ EK
Sbjct: 204 KYVPNLMIDQFGNYVVQFVLEHGRPQDRAMIISKLTGQMYNMAKHKFASNVCEKALVCAD 263
Query: 244 P--------SIFTPCQ-----------HKYGNFVIQQALRVTKGFQ 270
P I TP Q +GN+V+Q+AL V Q
Sbjct: 264 PESRRQLIDEIMTPKQDGLSPIMGLMKDSFGNYVLQRALTVADADQ 309
>gi|406698770|gb|EKD01997.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
8904]
Length = 711
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 54/271 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
I + GS F+Q L K+FE + F LMTD +G ++ A
Sbjct: 328 ICEFASDQHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAA 387
Query: 92 SMQKLIKLLVGSP---------CISLVISAAYRRFKDMM-FSKEASSVIIKCLE------ 135
LIK + G C + + + R +D E II+C++
Sbjct: 388 QKAALIKKMEGQALFLSNHMYGCRVMQTALEHARTEDRAKLVAELDGHIIECVKSSNANH 447
Query: 136 ------TLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
TLD + A + H REL+TH GC L + + LLD + + +
Sbjct: 448 VIQRLITLDPPRG--FMDAFIGHVRELSTHPFGCRVLQKSFEVLPPEKIRPLLDEMHTCS 505
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP 249
L + GNYVVQ V+ G+ + ++ ++ + K IF
Sbjct: 506 HELMINQFGNYVVQSVITEGEGRKHDRDLAVAEIKTR-------------------IFDL 546
Query: 250 CQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
C+HK+ + V+++AL+ +R +I E+
Sbjct: 547 CRHKFASNVVEKALK--HANPADKRELISEM 575
>gi|357454231|ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ +Y + L YGC R +QK I+++ I +V
Sbjct: 762 GNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGC---RVIQKAIEVVDLDQKIKMV 818
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + VI KC+E + E + + + L+TH GC +
Sbjct: 819 QELDGNIMR-CVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRV 877
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + ++D I L++D GNYVVQHVL G I L G ++
Sbjct: 878 LEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQM 937
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 938 SQQKFASNVVEK 949
>gi|145509128|ref|XP_001440508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407725|emb|CAK73111.1| unnamed protein product [Paramecium tetraurelia]
Length = 407
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +Q++L IFE + + L + YGC +A QKL+++ + +
Sbjct: 145 GNYVVQRILEQGSQQQRELIFEQLSQQILVLCYNTYGCRVA---QKLLEISYNTEKFDQI 201
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ ++++ + VI K E + QK+E L + ++L+ GC +
Sbjct: 202 FKVVSSQIRNLVLDTNGNHVIQKIAELVKSQKSEWLIDGVLGQIQKLSNDSHGCRLIQQI 261
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + + + S + L GNY+VQ +L G KI + + E LS
Sbjct: 262 LELSSISQLNDIYRELLSIQDELCLSQYGNYIVQILLQRGPSDVVYKIQNTIIKNLERLS 321
Query: 230 LLRCGSHLVEK------YQRPSIFTPCQHK-----------YGNFVIQ 260
+ GS++V+K Y R I H YGN+VIQ
Sbjct: 322 CDKFGSNVVDKSVNISVYMRKEILKVFIHNMNVFYKLSNNCYGNYVIQ 369
>gi|449488821|ref|XP_004176337.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1, partial
[Taeniopygia guttata]
Length = 1076
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L TH GC + + + +L+
Sbjct: 831 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALXTHPYGCRVIQRILEHCLPEQTLPILE 890
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-- 241
+ H E L +D GNYV+QHVL G + KI + ++G LS + S++VEK
Sbjct: 891 ELLQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 950
Query: 242 --------------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+++T + +Y N+V+Q+ + V + Q
Sbjct: 951 HASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ 999
>gi|307210859|gb|EFN87212.1| Maternal protein pumilio [Harpegnathos saltator]
Length = 627
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L ++ +F+ + + LMTD +G ++
Sbjct: 268 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPE 327
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ +G ++ + + +
Sbjct: 328 QKSTLAQKVRGHVLPLALQMYGCRVIQKALES-IGPEQQQEIVRELDGHVLKCVKDQNGN 386
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E ++ + + + A L+TH GC + + + G+L + +
Sbjct: 387 HVVQKCIECVEPRALQFVIGAFTGQVFALSTHPYGCRVIQRILEHCTPEQTQGILQELHA 446
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L +D GNYV+QHVL G + ++ S ++GK LS + S++VEK
Sbjct: 447 STDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEK 499
>gi|242054955|ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 33/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
+V + GS F+Q+ L +FE + + LMTD +G ++ A
Sbjct: 727 VVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAE 786
Query: 92 SMQKLIKLLVGS-----------PCISLVISAAYRRFKDMMFS------------KEASS 128
++L L+G I I K M + + +
Sbjct: 787 QRRELADKLLGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMKCVRDQNGNH 846
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGL-LDLISS 187
VI KC+E + E + + H L+TH GC + + P+ + +D I
Sbjct: 847 VIQKCIECVPEDSIQFIISTFYGHVVPLSTHPYGCRVIQRVLEHCADPKTQQIVMDEILQ 906
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G I L G+ ++S + S++VEK
Sbjct: 907 SVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNVVEK 959
>gi|167392700|ref|XP_001740261.1| pumilio [Entamoeba dispar SAW760]
gi|165895722|gb|EDR23351.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 525
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 24/213 (11%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++ V L+ + + + + VI KC+E D Q
Sbjct: 290 YGC---RVVQKAVEY-VSMKDRRLLFEELRKSLVRCIEDQNGNHVIQKCVEKGDRQMVMD 345
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A E H GC + I + LL +I H+ L++D GNYVVQ+
Sbjct: 346 IVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQN 405
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-----------------YQRPSIF 247
VL G I +KG LS+ + S+++EK YQ I
Sbjct: 406 VLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQILEEIYQNNGIL 465
Query: 248 TPCQHKYGNFVIQQALRVTKGFQMTERNIIQEL 280
Q ++ N+V+Q ++ + ER I EL
Sbjct: 466 QMMQDQFANYVVQ---KIIEAIDSLEREKIVEL 495
>gi|294655796|ref|XP_457992.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
gi|199430612|emb|CAG86050.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
Length = 820
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 32/231 (13%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARS-------MQ 94
V K + GS F+Q+ L IF + +DLMTD +G ++ + +Q
Sbjct: 483 VEFTKDQHGSRFIQQKLPESSDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHGSPIQ 542
Query: 95 KLIKL-------------LVGSPCISLVISAA--------YRRFKDMMF----SKEASSV 129
K I L G + + A KD + + + V
Sbjct: 543 KKILLDCMIGHIYELSLQTFGCRVVQRALEAIDLDGQIQIIEELKDYILVCAKDQNGNHV 602
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
I K +ET+ + E + + N L+TH GC + + R +L ++
Sbjct: 603 IQKSIETIPFDRIEFVLESLDNQIYHLSTHPYGCRVIQRLLEHSDAEDRKKILGELNRFI 662
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+L +D GNYV+QH L G+ + E+I ++ G S + S+++EK
Sbjct: 663 FYLIQDQYGNYVMQHTLERGNPEDREEILKIVLGSVVNFSKHKFASNVIEK 713
>gi|313229012|emb|CBY18164.1| unnamed protein product [Oikopleura dioica]
Length = 750
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 54/282 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
+V + + GS F+Q+ L + + +F + + + L+ D +G ++ A
Sbjct: 427 MVEFSQDQHGSRFIQQKLERCNPSDRQLVFNEIISHSYQLIIDVFGNYVIQKFLEFGTAE 486
Query: 92 SMQKLIKLLVGSPC-ISL------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
Q+++ + G +SL VI A + M+ E + I++C++ D+
Sbjct: 487 QKQQIVDNIKGKVLQLSLQMYGCRVIQTALESLNQEQQMIIVNELQNSILRCVK--DQNG 544
Query: 142 NEVLY--------------LAAMN-HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ ++A N L+TH GC + + + +++ I
Sbjct: 545 NHVIQKIIECLPADNLEFIISAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQYMPIMEEIH 604
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ E L +D GNYV+QH+L G ++ + I + G+ LS + S+++EK
Sbjct: 605 KNHEMLIQDQYGNYVIQHILNRGKMEDRQMILRAVMGRIVTLSQHKFASNVIEKCVTTSN 664
Query: 241 -----------YQRP-SIFTPCQHKYGNFVIQQALRVTKGFQ 270
Q P S+F + ++ N+V+Q+ L + Q
Sbjct: 665 RTERALLIEEVCQSPDSLFIMMKDQFANYVVQKMLDMGDSAQ 706
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 19/207 (9%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
K + G+ +QK++ + I A L T YGC R +Q++++
Sbjct: 540 KDQNGNHVIQKIIECLPADNLEFIISAFNGQVVGLSTHAYGC---RVVQRVLEHCTEEQY 596
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH------ 159
+ ++ ++ + ++ + + VI L + +++ A M L+ H
Sbjct: 597 MP-IMEEIHKNHEMLIQDQYGNYVIQHILNRGKMEDRQMILRAVMGRIVTLSQHKFASNV 655
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAE---FLSKDPSGNYVVQHVLGLGDLKYSEK 216
+ CV+ +N R L++ + + + KD NYVVQ +L +GD +K
Sbjct: 656 IEKCVTTSNRT------ERALLIEEVCQSPDSLFIMMKDQFANYVVQKMLDMGDSAQRQK 709
Query: 217 ICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H++ K ++
Sbjct: 710 MVQKMKPHVSNLKRFTYGKHILTKLEK 736
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 61/287 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 768 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYV---IQKFFEF- 823
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 824 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 882
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 883 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 942
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 943 ELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVT 1002
Query: 241 ----------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQM 271
+ ++ + +Y N+V+Q+ + V++ Q+
Sbjct: 1003 HATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1049
>gi|224059464|ref|XP_002299859.1| predicted protein [Populus trichocarpa]
gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa]
Length = 1065
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLV---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + VI KC+E + E
Sbjct: 815 YGC---RVIQKAIEVVDLDQKIKMVEELDGHVMRCVRD----QNGNHVIQKCIECIPEDN 867
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
+ + + L+TH GC + + + + ++D I L++D GNY
Sbjct: 868 IQFIVSTFFDQVVNLSTHPYGCRVIQRILEHCKDAKTESKVMDEILGAVSMLAQDQYGNY 927
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 928 VVQHVLEHGKSHERSAIIKELAGKIVQMSQQKFASNVVEK 967
>gi|170063110|ref|XP_001866961.1| pumilio [Culex quinquefasciatus]
gi|167880847|gb|EDS44230.1| pumilio [Culex quinquefasciatus]
Length = 852
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E +D + + A N L+TH GC + + + +L + ++
Sbjct: 569 VVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTQEQTAPILGELHAN 628
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 629 TEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKCVTHATRA 688
Query: 241 -----------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+ + + +Y N+V+Q+ + V+ + T+R ++
Sbjct: 689 ERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVS---EPTQRKVL 733
>gi|225463345|ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera]
Length = 1017
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +I+L + + + R +D + + VI KC+E++ +K
Sbjct: 775 YGCRVIQKALDVIELEQKTLLVRELDGHVMRCVRD----QNGNHVIQKCIESVPTEKIGF 830
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A +H L+TH GC + + + ++D I L++D GNYV Q
Sbjct: 831 IISAFRSHVATLSTHPYGCRVIQRVLEHCTDELQSQFIVDEILESICSLAQDQYGNYVTQ 890
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I + LKG +LS + S++VEK
Sbjct: 891 HVLERGKPHERSQIINKLKGHIVQLSQHKFASNVVEK 927
>gi|307187049|gb|EFN72338.1| Maternal protein pumilio [Camponotus floridanus]
Length = 787
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + + GS F+Q+ L + +F+ + + LMTD +G ++
Sbjct: 423 IVEFSQDQHGSRFIQQKLERASANEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPE 482
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK ++ + +V K + + +
Sbjct: 483 QKSTLAQKVRGHVLPLALQMYGCRVIQKALESIAPEQQQEIVRELDGHVLK-CVKDQNGN 541
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
V+ KC+E ++ + + + A L+TH GC + + + G+L + +
Sbjct: 542 HVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGILQELHA 601
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L +D GNYV+QHVL G + ++ ++GK LS + S++VEK
Sbjct: 602 ATDQLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEK 654
>gi|145497190|ref|XP_001434584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401711|emb|CAK67187.1| unnamed protein product [Paramecium tetraurelia]
Length = 581
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
D+ D G H ++Q L+ L+ +V ++ + + + +I K +
Sbjct: 342 DIACDKKGTH---AIQSLVSLISCKQEEQMVENSIKNNIISLTLDSQGTHLIKKIIARFS 398
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG--PRRGGLLDLISSHAEFLSKDP 196
E + ++ M+ F ++ H G L + I + + + +++ I H + + +DP
Sbjct: 399 EDRLNNIFNKLMDRFIQVVNHQFGLCVLKDLITKFKNNLDKSTVIINKIRDHLDEIIQDP 458
Query: 197 SGNYVVQHVLGL-GDLKYSEKICSLLKGKFEELSLLRCGSHLVE--------KYQRPSIF 247
GNY VQHV+ + GDLK + I +L K +LS+ + S++VE K Q+ I
Sbjct: 459 FGNYGVQHVIDVYGDLKCASIIDKIL-LKLIQLSIHKYSSNVVEKCILETSPKTQKRFIK 517
Query: 248 TPCQ---------HKYGNFVIQQALRVTKGFQMTERNIIQE 279
Q +K+G FV+Q+AL+ + ++ E +++Q+
Sbjct: 518 QLSQDIICLELMKNKFGTFVLQKALQ--EADKLAEADLLQQ 556
>gi|20160612|dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|125572616|gb|EAZ14131.1| hypothetical protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + ++ + L YGC + + +++ L + ++ +
Sbjct: 763 GNYVVQKFFEHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTEL 822
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + L+TH GC +
Sbjct: 823 DGHIMRCVRD----QNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRV 878
Query: 170 INEMRGPRRGGL-LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ + +D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 879 LEHCTDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQM 938
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 939 SQQKFASNVVEK 950
>gi|403358108|gb|EJY78690.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1163
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
Query: 39 YDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIK 98
Y + L G+ F QK++ S KI + + D G H SMQ LI+
Sbjct: 885 YHLHTLMSDSYGNYFCQKLMQSSSSAQRLKILNVLRPNILLISRDKKGTH---SMQCLIE 941
Query: 99 LLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
++ + D+ F + V+ K L + E+ + + + F EL+
Sbjct: 942 MINMPEEEEELKKGIQDHIIDLAFDGNGTHVLQKVLLCMKEENIDFIINPILEKFIELSM 1001
Query: 159 HVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKI 217
G + I++++G + + +S+H E L + P GNY VQ L +L Y I
Sbjct: 1002 DQNGLCVIKKIISKIQGHETKIAISKKLSNHVEELVQSPYGNYAVQQALEKWELPYCLPI 1061
Query: 218 CSLLKGKFEELSLLRCGSHLVEK 240
L+ +LS+ + S+++EK
Sbjct: 1062 FEKLEPHLMQLSVQKFSSNVIEK 1084
>gi|367028016|ref|XP_003663292.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
gi|347010561|gb|AEO58047.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
Length = 891
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 115/285 (40%), Gaps = 62/285 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + S F+Q+ L +S ++F + K LM D +G ++ MQKL +
Sbjct: 498 IVEFSGDQQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDVFGNYV---MQKLFEY- 553
Query: 101 VGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLETL---------------------D 138
G V+++A + + D+ A V+ K LE + D
Sbjct: 554 -GDQVQKKVLASAMKGKVVDLSMQPYACRVVQKALEHVLVEQQTELVKELESDLLKVAKD 612
Query: 139 EQKNEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ N V+ A M F+ ELA+H GC + + + L+
Sbjct: 613 QHGNHVIQQAIVLVPREHIDFIMTGFKGRVYELASHQFGCRVIQRILEHGTEADKAALMV 672
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + A+ L D GNYV+QHVL G + K+ ++ + LS + S++VEK
Sbjct: 673 ELHNSAQSLVTDMYGNYVIQHVLEKGRPEDRAKMIGVVTPQLLMLSRHKNASNVVEKCIM 732
Query: 241 -----YQRP------------SIFTPCQHKYGNFVIQQALRVTKG 268
QR +F + ++GN+VIQ+ ++ +G
Sbjct: 733 LGTPEEQRAIRDKLMGEEPNSPLFQLMKDQFGNYVIQKLVKALQG 777
>gi|356538984|ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + VI KC+E + E
Sbjct: 796 YGC---RVIQKAIEVVDLDQKIEMVQELDGNVMRCVRD----QNGNHVIQKCIECVPEDA 848
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
+ + L+TH GC + + + P + ++D I L++D GNY
Sbjct: 849 IHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNY 908
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L GK ++S + S++VEK
Sbjct: 909 VVQHVLEHGKPHERSCIIKELAGKIVQMSQQKFASNVVEK 948
>gi|384488095|gb|EIE80275.1| hypothetical protein RO3G_04980 [Rhizopus delemar RA 99-880]
Length = 807
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------ARSM 93
IV + GS F+Q+ L +S +FE V LMTD +G ++ M
Sbjct: 493 IVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQM 552
Query: 94 QKLI--KLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQ 140
QK I K + G +SL V+ A + KE I+KC++ D+
Sbjct: 553 QKTILAKQMEGH-VLSLSLQMYGCRVVQKALEHVLTEQQAKLVKELDGCILKCIK--DQN 609
Query: 141 KNEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
N V+ A +N F LATH GC + + LLD +
Sbjct: 610 GNHVIQKAIERVPAQHIQFIINAFHGQVYNLATHPYGCRVIQRMFEHCTENQTEPLLDEL 669
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L +D GNYV+QH+L G + ++G +LS + S++VEK
Sbjct: 670 HRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNVVEK 724
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 21/206 (10%)
Query: 46 KTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC 105
K + G+ +QK + + I A + ++L T YGC R +Q++ + +
Sbjct: 606 KDQNGNHVIQKAIERVPAQHIQFIINAFHGQVYNLATHPYGC---RVIQRMFEHCTENQT 662
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH------ 159
L + +R ++ + + VI LE + H +L+ H
Sbjct: 663 EPL-LDELHRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNV 721
Query: 160 VRGCVSLNN------FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKY 213
V CV + I E+ PR G L L + + KD NYV+Q +L + D
Sbjct: 722 VEKCVDFGSKRDRQLLIEEVLQPRSDGTLPLAT-----MMKDQYANYVIQKMLDVVDDDQ 776
Query: 214 SEKICSLLKGKFEELSLLRCGSHLVE 239
E + + +K + L G HL++
Sbjct: 777 RELLVTKIKPHLQFLKKYTYGKHLIQ 802
>gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + ++ + L YGC + + +++ L + ++ +
Sbjct: 775 GNYVVQKFFEHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTEL 834
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + L+TH GC +
Sbjct: 835 DGHIMRCVRD----QNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRV 890
Query: 170 INEMRGPRRGGL-LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ + +D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 891 LEHCTDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQM 950
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 951 SQQKFASNVVEK 962
>gi|15489333|gb|AAH13765.1| Pum2 protein, partial [Mus musculus]
Length = 204
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 156 LATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSE 215
L+TH GC + + + +L+ + H E L +D GNYV+QHVL G +
Sbjct: 18 LSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKS 77
Query: 216 KICSLLKGKFEELSLLRCGSHLVEKY----------------------QRPSIFTPCQHK 253
KI S ++GK LS + S++VEK +++T + +
Sbjct: 78 KIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQ 137
Query: 254 YGNFVIQQALRVTKGFQMTERNII 277
Y N+V+Q+ + + + Q R II
Sbjct: 138 YANYVVQKMIDMAEPAQ---RKII 158
>gi|344302253|gb|EGW32558.1| hypothetical protein SPAPADRAFT_67158 [Spathaspora passalidarum
NRRL Y-27907]
Length = 926
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGYGCHL-- 89
+I+ L K + G FLQK + ++ Y+ IF+ +Y Y +DL+ D +G +L
Sbjct: 221 EILKLSKDQYGCRFLQKKID-ENLIPNYQVRHANFEIIFKQIYPYMYDLIIDPFGNYLIQ 279
Query: 90 -------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFK 118
R++QK+I L S + L+I
Sbjct: 280 KLIIYCNEANLNLLLEILQENLFQISISQHGTRALQKIIDNLNNSYQLELLIKGLKPYII 339
Query: 119 DMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
D++ + VI K L Q + +Y + ++ +ATH GC L +N + +
Sbjct: 340 DLIKDLNGNHVIQKILNKYQPQDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHVTPAQL 399
Query: 179 GGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELSLLRCGS 235
I F L D GNYV+Q+++ + + + KI + ++ L L+ S
Sbjct: 400 QQFSAAILRFDNFKLLINDQFGNYVLQYLISINSFEMNYKIFENFVQFNIGNLCNLKFSS 459
Query: 236 HLVEKY 241
++VEK+
Sbjct: 460 NVVEKF 465
>gi|449500099|ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + + R +D + + VI KC+E + ++ +
Sbjct: 771 YGCRVIQKALEVIELDQKTHLVRELDGHVMRCVRD----QNGNHVIQKCIECVPSEEIDF 826
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ + L+TH GC + + + ++D I L++D GNYV+Q
Sbjct: 827 IISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQCIVDEILDSVYGLAQDQYGNYVIQ 886
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I S L GKF +S + S++VEK
Sbjct: 887 HVLERGMHHERSQIISKLTGKFVRMSQHKYASNVVEK 923
>gi|449453445|ref|XP_004144468.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + + R +D + + VI KC+E + ++ +
Sbjct: 771 YGCRVIQKALEVIELDQKTHLVRELDGHVMRCVRD----QNGNHVIQKCIECVPSEEIDF 826
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ + L+TH GC + + + ++D I L++D GNYV+Q
Sbjct: 827 IISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQCIVDEILDSVYGLAQDQYGNYVIQ 886
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I S L GKF +S + S++VEK
Sbjct: 887 HVLERGMHHERSQIISKLTGKFVRMSQHKYASNVVEK 923
>gi|242072408|ref|XP_002446140.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
gi|241937323|gb|EES10468.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
Length = 761
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 23/235 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + + +L YGC R +QK+++++ I +V
Sbjct: 466 GNYVIQKFFEFATESQLIQLADKLKGHILELSLQMYGC---RVVQKVLEVVDMDRKIDIV 522
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + VI KC+E + E + + ++ L TH GC +
Sbjct: 523 HELKNYVLK-CIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRV 581
Query: 170 INEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P + +++ I L+ D GNYVVQHVL G + I L G+ L
Sbjct: 582 LEHCHDPVTQSAIMNEIVQQTFHLTDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVIL 641
Query: 229 SLLRCGSHLVEK-------YQRPSIFTPC-----------QHKYGNFVIQQALRV 265
S + S+++EK +R S+ + ++GN+V+Q+ L+
Sbjct: 642 SKQKFASNVIEKCLAFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQRVLQT 696
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
++ISS F L KD GNYVVQ VL D KY E I S +K EL G H+V +
Sbjct: 669 EIISSGQTFQELMKDQFGNYVVQRVLQTCDDKYLEMILSSIKLHLNELKNYTYGKHIVAR 728
Query: 241 YQR 243
++
Sbjct: 729 VEK 731
>gi|255945903|ref|XP_002563719.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588454|emb|CAP86563.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 58/279 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
+V + GS F+Q+ L +S ++F + LMTD +G H ++
Sbjct: 495 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQT 554
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A + KE + ++KC+ D+
Sbjct: 555 QKKILANQMRGHVLALSTQMYGCRVVQKALEHILTDQQAAMVKELENHVLKCVR--DQNG 612
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N FR LA H GC + + R +L +
Sbjct: 613 NHVIQKAIERVPSQYVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQSILAELH 672
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ GD K ++ ++ G+ S + S++VEK
Sbjct: 673 ACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVVEKSIEFGA 732
Query: 241 -YQRPSIFTP---------------CQHKYGNFVIQQAL 263
++R I + + +YGN+VIQ+ L
Sbjct: 733 EHERNHIISTLTSTNDRGESPLLGLMRDQYGNYVIQKVL 771
>gi|168030336|ref|XP_001767679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680999|gb|EDQ67430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1134
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + + +S + R +D + + VI KC+E + K
Sbjct: 882 YGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRD----QNGNHVIQKCIECVPPAKIHF 937
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQ 203
+ A N L+TH GC + + ++ G+++ I L++D GNYVVQ
Sbjct: 938 IISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQ 997
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I + L G+ ++S + S++VEK
Sbjct: 998 HVLEHGRDHERSDIITKLAGQIVQMSQHKFASNVVEK 1034
>gi|302916121|ref|XP_003051871.1| hypothetical protein NECHADRAFT_38196 [Nectria haematococca mpVI
77-13-4]
gi|256732810|gb|EEU46158.1| hypothetical protein NECHADRAFT_38196 [Nectria haematococca mpVI
77-13-4]
Length = 394
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 64/286 (22%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + GS F+Q + +S +IF + LM D +G ++ +QK
Sbjct: 82 IVEFSGDQQGSRFVQSQIDTANSDEKDRIFREIEPNAVQLMKDLFGNYV---IQKFFDH- 137
Query: 101 VGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLETL---------------------D 138
GS +++ + R DM + V+ K ++ + D
Sbjct: 138 -GSQVQKSILADKMKGRMVDMSMQMYSCRVVQKAMDHILVNQQAELVQELQPRIIEVIKD 196
Query: 139 EQKNEV----LYLAAMNHF-----------RELATHVRGCVSLNNFINEMRGPRRGGLLD 183
E N V + L H RE A+H GC + + + L+
Sbjct: 197 EHGNHVVQKIIQLVPREHIDFIMDVFKGRVREFASHNYGCRVIQRILEYGSEEDKLTFLE 256
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + +FL D GNYV QH+L G+ K ++I +++ + LS + S++VEK
Sbjct: 257 ELHNSWKFLFNDQFGNYVAQHILDKGEAKDRDRIYTMVMSQILTLSRQKQASNVVEKCIH 316
Query: 241 ----YQRPSIF----TPCQ-----------HKYGNFVIQQALRVTK 267
QR I+ T C+ ++GN+VI++ R K
Sbjct: 317 TCTPQQRSEIYKVMTTVCEDGSMPLQQLMSDQFGNYVIRKFTRPRK 362
>gi|212526552|ref|XP_002143433.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210072831|gb|EEA26918.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 929
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 114/293 (38%), Gaps = 61/293 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H +S
Sbjct: 507 IVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 566
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
++++ + S ++L V+ A + KE ++KC+ D+
Sbjct: 567 QKRILANQMKSHILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQHVMKCVR--DQNG 624
Query: 142 NEVLYLA----AMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +H R +LATH GC + + R +L +
Sbjct: 625 NHVIQKAIERVPTHHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETADRESILTELH 684
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
E L D GNYV+QHV+ G+ K + + S + S++VEK
Sbjct: 685 VCTESLIPDQFGNYVIQHVIENGEEKDRSVMIKSVVKNIHNFSKHKFASNVVEKSIEFGE 744
Query: 241 -YQRPSIF-----------TP----CQHKYGNFVIQQALRVTKGFQMTERNII 277
QR I +P + +YGN+VIQ+ L K +ER +I
Sbjct: 745 ESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKD---SEREMI 794
>gi|402083794|gb|EJT78812.1| hypothetical protein GGTG_03909 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 911
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
DL T Y C R +QK ++ ++ LV + +M ++ + VI K +E L
Sbjct: 590 DLSTQMYAC---RVVQKALEHVLVEQQAELVKELEHHTLS-IMQNQNGNHVIQKIVELLP 645
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSG 198
Q +Y A H +EL+T GC + + + ++D I + L D G
Sbjct: 646 RQHIGFIYEAVRGHLKELSTQTYGCRVVQRMLEQGTEEDTVVMMDEIYASMTALITDQYG 705
Query: 199 NYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
NYVVQH++ G + + + + S + S++VEK
Sbjct: 706 NYVVQHIITNGSPADQRRTIDAVMAQVVQFSKHKYASNIVEK 747
>gi|168030468|ref|XP_001767745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681065|gb|EDQ67496.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1148
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + + +S + R +D + + VI KC+E + K
Sbjct: 886 YGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVRD----QNGNHVIQKCIECVPPAKIHF 941
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQ 203
+ A N L+TH GC + + ++ G+++ I L++D GNYVVQ
Sbjct: 942 IISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQ 1001
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I + L G+ ++S + S++VEK
Sbjct: 1002 HVLEHGRDHERSEIITKLAGQIVQMSQHKFASNVVEK 1038
>gi|219116400|ref|XP_002178995.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409762|gb|EEC49693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 319
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + + +I + L YGC R +QK ++ L L+
Sbjct: 53 GNYVIQKLLDFGSADMKSEIRNTLESEMLQLSLQMYGC---RVVQKALEALPEEELPRLL 109
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + + VI KC+E L EQ ++ +N + L+ H GC L
Sbjct: 110 MEFHHNVLS-CIHDQNENHVIQKCVEFLTEQIEFIINDVLVN-TKTLSCHPYGCRVLQRI 167
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL-LKGKFEEL 228
+ ++ +LD I L D GNYV+QHVL G + I + ++ L
Sbjct: 168 LEHCEKTKKTAVLDEICKAHRKLLDDQYGNYVIQHVLQFGRQSDRDSILHIVVENGLLGL 227
Query: 229 SLLRCGSHLVEKY-------QRPSIFTP--------CQHKYGNFVIQQALRVT 266
S + S++VEK QR +I + Y N+V+Q L V
Sbjct: 228 SRQKFASNVVEKLLKYGNGSQRRAIVREMLKVILLMVRDAYANYVVQTTLDVV 280
>gi|449459894|ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1016
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ + + + L YGC + + +++ + + ++ +
Sbjct: 727 GNYVVQKFFEHGTASQIRELADQLNGHVLALSLQMYGCRVIQKAIEVVDVDQQTKMVTEL 786
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + V+ KC+E + E+ + + + L+TH GC +
Sbjct: 787 DGQIMRCVRD----QNGNHVVQKCIECIPEEAIQFIVSTFYDQVVTLSTHPYGCRVIQRV 842
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 843 LEHCHNPKTQHIMMDEILQSVCTLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 902
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 903 SQQKFASNVIEK 914
>gi|223947513|gb|ACN27840.1| unknown [Zea mays]
gi|413950240|gb|AFW82889.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 873
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + + ++ + R +D + + VI KC+E + + E
Sbjct: 622 YGCRVIQKAIEVVDLELQTKMVAELEGHVMRCVRD----QNGNHVIQKCIECIPQHAIEF 677
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P+ ++D I L++D GNYVVQ
Sbjct: 678 IISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQ 737
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 738 HVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 774
>gi|226505762|ref|NP_001146200.1| uncharacterized protein LOC100279770 [Zea mays]
gi|219886161|gb|ACL53455.1| unknown [Zea mays]
Length = 873
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + + ++ + R +D + + VI KC+E + + E
Sbjct: 622 YGCRVIQKAIEVVDLELQTKMVAELEGHVMRCVRD----QNGNHVIQKCIECIPQHAIEF 677
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P+ ++D I L++D GNYVVQ
Sbjct: 678 IISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQ 737
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 738 HVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 774
>gi|402590419|gb|EJW84349.1| hypothetical protein WUBG_04743 [Wuchereria bancrofti]
Length = 399
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 41/239 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR-------SM 93
+V + + GS F+Q+ L +F+ V + LMTD +G ++ + S
Sbjct: 56 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTSE 115
Query: 94 QK-LIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
QK ++ V +SL VI A + M KE ++KC++ D+
Sbjct: 116 QKNILTNAVKGNVMSLALQMYGCRVIQKALESIEPEQQMEILKEMEGQVLKCVK--DQNG 173
Query: 142 NEVL--YLAAMNHFR------------------ELATHVRGCVSLNNFINEMRGPRRGGL 181
N V+ + ++ R L+TH GC + + ++ +
Sbjct: 174 NHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPV 233
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
LD + H + L D GNYV+QHV+ G L+ ++I + +KG + + S+++EK
Sbjct: 234 LDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLRFAQHKFASNVIEK 292
>gi|242089229|ref|XP_002440447.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
gi|241945732|gb|EES18877.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
Length = 878
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + + ++ + R +D + + VI KC+E + + E
Sbjct: 627 YGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVRD----QNGNHVIQKCIECIPQHAIEF 682
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P+ ++D I L++D GNYVVQ
Sbjct: 683 IVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQ 742
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 743 HVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 779
>gi|413950241|gb|AFW82890.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 869
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + + ++ + R +D + + VI KC+E + + E
Sbjct: 618 YGCRVIQKAIEVVDLELQTKMVAELEGHVMRCVRD----QNGNHVIQKCIECIPQHAIEF 673
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P+ ++D I L++D GNYVVQ
Sbjct: 674 IISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQ 733
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 734 HVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 770
>gi|357143524|ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISS 187
VI KC+E + +++ + + A H +L+TH GC + + + +++ I
Sbjct: 799 VIQKCIECIPQERIQFIISAFYGHVVDLSTHPYGCRVIQRVLEHCDDESTQNAMMEEIMQ 858
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYV+QHVL G + I + L G+ ++S + S++VEK
Sbjct: 859 SVVPLTQDQYGNYVIQHVLQYGKPEERTSIITQLAGQIVKMSQQKFASNVVEK 911
>gi|157132421|ref|XP_001656036.1| pumilio [Aedes aegypti]
gi|108871194|gb|EAT35419.1| AAEL012420-PA [Aedes aegypti]
Length = 796
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E ++ + + A N L+TH GC + + + +L + ++
Sbjct: 502 VVQKCIECVEPTALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTSPILAELHAN 561
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
E L +D GNYV+QHVL G + + + ++GK LS + S++VEK
Sbjct: 562 TEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKCVTHATRA 621
Query: 241 -----------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ + + +Y N+V+Q+ + V++ Q
Sbjct: 622 ERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQ 662
>gi|145553381|ref|XP_001462365.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430204|emb|CAK94992.1| unnamed protein product [Paramecium tetraurelia]
Length = 517
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL- 100
V K G+ +QK+ ++F + + ++L + +GC R +QK+I+++
Sbjct: 230 VQFSKDVFGNYLMQKIFEKGTQHQQQRLFNKIRPHAYELSKNNFGC---RVIQKIIEIIS 286
Query: 101 VGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHV 160
V + I + + K +++ + VI+KCLE L ++K E + L +
Sbjct: 287 VNESLQNQFIDSIRLQVKSLLYDSSGNYVILKCLEVLQQEKIEFFLQPIEDSTLYLCSSQ 346
Query: 161 RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
GC L + + ++ H L + GN+++Q L Y + +
Sbjct: 347 YGCKILLKALELFSPIQTDKIMTTCLQHQFNLCQQEFGNHILQ--FALKSSHYQPFVVNF 404
Query: 221 LKGKFEELSLLRCGSHLVEK 240
+ FE+L L + S+ VEK
Sbjct: 405 VLTNFEKLCLNKYASNTVEK 424
>gi|145498925|ref|XP_001435449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402581|emb|CAK68052.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D++LL K + G+ +QK++ + IFE + + +L D +GC R +QKL++
Sbjct: 162 DLLLLSKHKFGNYVIQKIIENSNQNTRTLIFEQLNPHILELSYDRFGC---RVIQKLLEF 218
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
++ + L+ K ++F + + VI K ++ + + + + N+ ++ +H
Sbjct: 219 ILNQLKVQLINQLKPYALK-LIFDQCGNHVIQKIIDLVTD--ADFIIDLVTNNVDKVVSH 275
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
GC + + L + E LS GNY+VQ ++ G K E I
Sbjct: 276 PYGCRIAQKCLEMFPNDQLQALYISLIPLCERLSFCQYGNYIVQKMINSGPPKGFEVIGK 335
Query: 220 LLKGKFEELSLLRCGSHLVEKY 241
+K + E+S + S++ ++Y
Sbjct: 336 FIKQRIIEVSQDKYASNVAQRY 357
>gi|161138170|gb|ABX58017.1| pumilio-like protein 2 [Mesocestoides corti]
Length = 150
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + + + + N L++H GC + + + +LD +
Sbjct: 3 VIQKCIECVPSAELDFIITTFRNQVFALSSHPYGCRVIQRILEHCSAEQTRRILDELHKG 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L KD GNYVVQHVL G + +I + L+G+ LS + S+++EK
Sbjct: 63 VDNLVKDQYGNYVVQHVLEHGSQEDKSRIINSLRGRVAGLSAHKFASNVMEK 114
>gi|449487299|ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ E + + L YGC R +QK +++ V S + +
Sbjct: 708 GNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGC---RVIQKALEV-VDSEQQTQM 763
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
++ + + + VI KC+E + +++ + + A L+TH GC +
Sbjct: 764 VAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRV 823
Query: 170 INEMRGPRRGGL-LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + +D I L++D GNYV+QHVL G I S L G+ ++
Sbjct: 824 LEHCDDSNTQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKM 883
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 884 SQQKFASNVVEK 895
>gi|440475954|gb|ELQ44600.1| hypothetical protein OOU_Y34scaffold00071g16 [Magnaporthe oryzae
Y34]
gi|440487789|gb|ELQ67564.1| hypothetical protein OOW_P131scaffold00314g137 [Magnaporthe oryzae
P131]
Length = 847
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------ARSM 93
+V + GS F+Q L +S +IF+ + LM D +G ++ +
Sbjct: 471 VVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKFFEHGNQV 530
Query: 94 QK--LIKLLVGSPCISLV-ISAAYRRFKDMMFS-----KEASS--VIIKCLETLDEQKNE 143
QK L + G + V + K++ K+A+ V+ K +E + Q
Sbjct: 531 QKKALASQMKGKMALEHVLVEQQAELVKELEVEIVRIIKDANGNHVVQKIIELVPRQYIS 590
Query: 144 VLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQ 203
+ + +L+ H GC + + + ++ + HA L+ DP GNYV+Q
Sbjct: 591 FVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDADKATIMHELHQHAPMLTTDPYGNYVIQ 650
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H++ G + +K+ S++ G+ LS + S++VE+
Sbjct: 651 HIITHGKPEDRQKVISIVLGQIVLLSKHKLASNVVER 687
>gi|430812324|emb|CCJ30264.1| unnamed protein product [Pneumocystis jirovecii]
Length = 738
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR-------SM 93
IV + GS F+Q+ L G + +F+ ++ LMTD +G ++ + M
Sbjct: 408 IVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFMEHGDQM 467
Query: 94 QK--LIKLLVGSP-CISL------VISAAYRRFK-DMMFS--KEASSVIIKCLETLDEQK 141
QK L++ + G +SL V+ A + D S KE + ++KC++ +
Sbjct: 468 QKTLLLEQMKGHVLTLSLQTYGCRVVQKALEYIQIDQKISLVKELNGNVLKCIKNQNGNH 527
Query: 142 --NEVLYLAAMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
+++ + H + LATH GC + + R L+ + +
Sbjct: 528 VIQKIIEKVPIEHIQFLINTFQGQIYVLATHPYGCRVIQRMLEYCSQTR--DLIKELHLY 585
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
A+ L +D GNY +QH++ G+ + KI S++KG S + S++VEK
Sbjct: 586 AQNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRFSRHKFASNVVEK 637
>gi|449449485|ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ E + + L YGC R +QK +++ V S + +
Sbjct: 708 GNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGC---RVIQKALEV-VDSEQQTQM 763
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
++ + + + VI KC+E + +++ + + A L+TH GC +
Sbjct: 764 VAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRV 823
Query: 170 INEMRGPRRGGL-LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + +D I L++D GNYV+QHVL G I S L G+ ++
Sbjct: 824 LEHCDDSNTQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKM 883
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 884 SQQKFASNVVEK 895
>gi|320586016|gb|EFW98695.1| pumilio family mRNA-binding protein [Grosmannia clavigera kw1407]
Length = 953
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/285 (23%), Positives = 110/285 (38%), Gaps = 55/285 (19%)
Query: 39 YD-IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH--------- 88
YD IV + GS F+Q L +S +F + LM D +G +
Sbjct: 540 YDHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFEHG 599
Query: 89 -------LARSMQ-KLIKLLVGSPCISLVISAAYRRFKD--MMFSKE------------- 125
LA M+ K++ L + +V A D ++ +KE
Sbjct: 600 SQLQKKYLAEQMRGKIVDLSTQTYACRVVQKALQHILVDQQVILAKELEIDVIRVVKDPN 659
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K +E + + + A REL+ H GC + + + +L +
Sbjct: 660 GNHVIQKVVELVPREHINFIIDAFRGRVRELSAHNYGCRVIQRMLEHGLEEDKEMILSEL 719
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
+A L D GNYV QHV+ G + EK+ S + + +S + S++VEK
Sbjct: 720 HDNAMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTMSNNKFASNVVEKCIEFG 779
Query: 241 ----YQR-------------PSIFTPCQHKYGNFVIQQALRVTKG 268
QR P + + +YGN+VIQ+ L+ KG
Sbjct: 780 TAADRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQKLLKQLKG 824
>gi|256082282|ref|XP_002577387.1| pumilio [Schistosoma mansoni]
gi|350645489|emb|CCD59841.1| pumilio, putative [Schistosoma mansoni]
Length = 1501
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRF-KDMMFSKEASSVIIKCLETL 137
+ T YGC R +QK ++ + I +V R F + + + VI KC+E +
Sbjct: 1124 EFATQMYGC---RVIQKALESVPAEAKIHIV--GELRPFVTRCVKDQNGNHVIQKCIECV 1178
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
+ + + A L++H GC + + + +LD + E L KD
Sbjct: 1179 PPSELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTRPILDELHKGVEHLVKDQY 1238
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
GNYV+QHVL G + +I L+G+ LS + S+++EK
Sbjct: 1239 GNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVMEK 1281
>gi|224106433|ref|XP_002314164.1| predicted protein [Populus trichocarpa]
gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + + R +D + + VI KC+E + E +
Sbjct: 758 YGCRVIQKAIEVVDLEHKIKMVEELDGHVMRCVRD----QNGNHVIQKCIECIPEDNIQF 813
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQ 203
+ + L+TH GC + + + + + ++D I L++D GNYVVQ
Sbjct: 814 IVTTFFDQVVILSTHPYGCRVIQRILEHCKDAKTQSKVMDEILGAVSMLAQDQYGNYVVQ 873
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S++VEK
Sbjct: 874 HVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVVEK 910
>gi|170596494|ref|XP_001902784.1| RE63138p [Brugia malayi]
gi|158589322|gb|EDP28367.1| RE63138p, putative [Brugia malayi]
Length = 572
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--------ARS 92
+V + + GS F+Q+ L +F+ V + LMTD +G ++
Sbjct: 259 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTNE 318
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+ ++ V +SL VI A + M KE ++KC++ D+
Sbjct: 319 QKNILTNAVKGNVMSLALQMYGCRVIQKALESIEPEQQMEILKEMEGQVLKCVK--DQNG 376
Query: 142 NEVLY------------------LAAMNHFR--ELATHVRGCVSLNNFINEMRGPRRGGL 181
N V+ + A ++ L+TH GC + + ++ +
Sbjct: 377 NHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDDQKRPV 436
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
LD + H + L D GNYV+QHV+ G L+ ++I + +KG + + S+++EK
Sbjct: 437 LDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLRFAQHKFASNVIEK 495
>gi|312075892|ref|XP_003140618.1| hypothetical protein LOAG_05033 [Loa loa]
Length = 607
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 41/239 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR--------S 92
+V + + GS F+Q+ L +F+ V + LMTD +G ++ +
Sbjct: 264 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTTE 323
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+ ++ V +SL VI A + M KE ++KC++ D+
Sbjct: 324 QKNILTNAVKGNVMSLALQMYGCRVIQKALESIEPKQQMEILKEMEGQVLKCVK--DQNG 381
Query: 142 NEVLY------------------LAAMNHFR--ELATHVRGCVSLNNFINEMRGPRRGGL 181
N V+ + A ++ L+TH GC + + ++ +
Sbjct: 382 NHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPV 441
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
LD + H + L D GNYV+QHV+ G L+ ++I + +KG + + S+++EK
Sbjct: 442 LDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLHFAQHKFASNVIEK 500
>gi|238494168|ref|XP_002378320.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
gi|220694970|gb|EED51313.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
Length = 550
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 29/252 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + T + + + L T YGC R +QK ++ ++ S+V
Sbjct: 185 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGC---RVVQKALEHILTDQQASMV 241
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + + VI K +E + + + + A + +LATH GC +
Sbjct: 242 KELEHHVLR-CVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRM 300
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + R +L + L D GNYV+QHV+ G+ K ++ +++ S
Sbjct: 301 LEHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYS 360
Query: 230 LLRCGSHLVEK----------YQRPSIFTPC------------QHKYGNFVIQQALRVTK 267
+ S++VEK +Q S+ T + ++GN+VIQ+ L K
Sbjct: 361 KHKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLK 420
Query: 268 GFQMTERNIIQE 279
G ER+ + E
Sbjct: 421 G---AERDALVE 429
>gi|71395516|ref|XP_802323.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70861784|gb|EAN80877.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 449
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 42/249 (16%)
Query: 44 LGKTEGGSLFLQKMLSGK--DSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL- 100
+ K + G FLQ++L G D I V + +LM D Y L +QKL ++
Sbjct: 203 IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMIDQYANFL---IQKLFDMMP 259
Query: 101 ---------VGSPCI--------------SLVISAAYRRFKDMM---FSKEA-------- 126
V +P I +V + A R D++ SK+
Sbjct: 260 QDVRYKVACVAAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAH 319
Query: 127 -SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K L+ E +Y A + +A + +GC L + +R L++ I
Sbjct: 320 GNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQI 379
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
+++DP GNYV+Q+VL D K ++ I +L + + S+++EK R
Sbjct: 380 LRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLR-G 438
Query: 246 IFTPCQHKY 254
P Q Y
Sbjct: 439 ASQPVQEMY 447
>gi|168012861|ref|XP_001759120.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689819|gb|EDQ76189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1119
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + + +S + R +D + + VI KC+E + K
Sbjct: 867 YGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVRD----QNGNHVIQKCIECVPPAKINF 922
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQ 203
+ A N L+TH GC + + ++ G+++ I L++D GNYVVQ
Sbjct: 923 IISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQ 982
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I + L G+ ++S + S++VEK
Sbjct: 983 HVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEK 1019
>gi|409046090|gb|EKM55570.1| hypothetical protein PHACADRAFT_95334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 372
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 35/247 (14%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + T + + + + L YGC R +QK I+ + + V
Sbjct: 91 GNYVVQKFFEHGNELQTSLLAKTMEGHILPLSLQMYGC---RVVQKAIEHMPAEQQSAFV 147
Query: 110 ISAA---YRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMN-HFRELATHVRGCVS 165
A R KD + VI + +E++ ++ + ++AA H +LATH GC
Sbjct: 148 DELAGDVLRCVKD----ANGNHVIQRLIESVPPER--LTFIAAFQGHVCDLATHPYGCRV 201
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L + + LL + HA L +D GNYV+Q VL G + I S L G+
Sbjct: 202 LQRCFENLPEHQTRVLLSEVQEHALQLMQDQFGNYVIQFVLEHGQPQDRASIVSKLHGQM 261
Query: 226 EELSLLRCGSHLVEK------------------YQRPSIFTP----CQHKYGNFVIQQAL 263
+S + S++VEK RP P + ++ N+V+Q+AL
Sbjct: 262 LHMSRHKFASNVVEKALVMAEPSSRRALIEEVMAPRPDGPNPFVSMMKDQFANYVLQRAL 321
Query: 264 RVTKGFQ 270
V Q
Sbjct: 322 MVADQDQ 328
>gi|356542345|ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1053
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + VI KC+E + E
Sbjct: 802 YGC---RVIQKAIEVVDLDQKIEMVQELDGNVMRCVRD----QNGNHVIQKCIECVPEDA 854
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
+ + L+TH GC + + + P + ++D I L++D GNY
Sbjct: 855 IHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNY 914
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L K ++S + S++VEK
Sbjct: 915 VVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVEK 954
>gi|356538982|ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1049
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+++ I +V R +D + + VI KC+E + E
Sbjct: 798 YGC---RVIQKAIEVVDLDQKIEMVQELDGNVMRCVRD----QNGNHVIQKCIECVPEDA 850
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISSHAEFLSKDPSGNY 200
+ + L+TH GC + + + P + ++D I L++D GNY
Sbjct: 851 IHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNY 910
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VVQHVL G I L K ++S + S++VEK
Sbjct: 911 VVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVEK 950
>gi|448107289|ref|XP_004205317.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|448110239|ref|XP_004201581.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|359382372|emb|CCE81209.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|359383137|emb|CCE80444.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
Length = 792
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 45/254 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGY 85
L Q + I+ L K + G FLQK L ++ Y+ IF+ +Y + ++L+ D +
Sbjct: 269 LEQISHFILRLAKDQHGCRFLQKKLD-ENIVTNYQTRVDNFNIIFKEIYPHIYELIIDPF 327
Query: 86 GCHL---------------------------------ARSMQKLIKLLVGSPCISLVISA 112
G +L R++QKLI L +SL+ S
Sbjct: 328 GNYLIQKLVDYCGSDDTSLVLEILQYNLFQISINQHGTRALQKLISSLTTEYQLSLLTSG 387
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+++ + VI K L Q + +Y + +N +ATH GC L +N
Sbjct: 388 LSPYITELIKDLNGNHVIQKILNKYPTQSCQFIYDSIINDLLIVATHKHGCCVLQKCLNH 447
Query: 173 MRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELS 229
+ + I + F L D GNYV+Q+++ + L + + + + L
Sbjct: 448 VNNTQLNQFSQKILEYETFNKLINDQFGNYVLQYLISINSLCVNSTMYENFITFGIGNLC 507
Query: 230 LLRCGSHLVEKYQR 243
L+ S+++EK+ +
Sbjct: 508 TLKFSSNVIEKFLK 521
>gi|393907055|gb|EJD74503.1| puf domain-containing protein 9 [Loa loa]
Length = 731
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 41/239 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR--------S 92
+V + + GS F+Q+ L +F+ V + LMTD +G ++ +
Sbjct: 388 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTTE 447
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+ ++ V +SL VI A + M KE ++KC++ D+
Sbjct: 448 QKNILTNAVKGNVMSLALQMYGCRVIQKALESIEPKQQMEILKEMEGQVLKCVK--DQNG 505
Query: 142 NEVLY------------------LAAMNHFR--ELATHVRGCVSLNNFINEMRGPRRGGL 181
N V+ + A ++ L+TH GC + + ++ +
Sbjct: 506 NHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPV 565
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
LD + H + L D GNYV+QHV+ G L+ ++I + +KG + + S+++EK
Sbjct: 566 LDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLHFAQHKFASNVIEK 624
>gi|256082284|ref|XP_002577388.1| pumilio [Schistosoma mansoni]
gi|350645490|emb|CCD59842.1| pumilio, putative [Schistosoma mansoni]
Length = 1309
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRF-KDMMFSKEASSVIIKCLETL 137
+ T YGC R +QK ++ + I +V R F + + + VI KC+E +
Sbjct: 1017 EFATQMYGC---RVIQKALESVPAEAKIHIV--GELRPFVTRCVKDQNGNHVIQKCIECV 1071
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
+ + + A L++H GC + + + +LD + E L KD
Sbjct: 1072 PPSELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTRPILDELHKGVEHLVKDQY 1131
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
GNYV+QHVL G + +I L+G+ LS + S+++EK
Sbjct: 1132 GNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVMEK 1174
>gi|451845819|gb|EMD59130.1| hypothetical protein COCSADRAFT_175690 [Cochliobolus sativus
ND90Pr]
Length = 893
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-----QK 95
+V + GS F+Q+ L +S + +F + + LM D +G ++ + Q
Sbjct: 514 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQT 573
Query: 96 LIKLLVGSPCISLVISAAYRRFKDMMFSK-------EASSVIIKCLE-----TLDEQK-- 141
K+LVG V+ A + + + K E + ++K LE T+ +Q
Sbjct: 574 QKKILVGK-MKGHVLELANQMYACRVVQKALEHALTEQQASMVKELEKDVLKTVKDQNGN 632
Query: 142 ---NEVLYLAAMNHFRELATHVRGCV---SLNNF--------INEMRGPRRGGLLDLISS 187
+V+ M+H +++ RG V S+N++ + ++ P+R +L + +
Sbjct: 633 HVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEEPQRRFILTELHA 692
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L D GNYV QHV+ G + KI +L+K +F S + S++VE+
Sbjct: 693 EGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNVVER 745
>gi|62002537|gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
Length = 1118
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + + +S + R +D + + VI KC+E + K
Sbjct: 866 YGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVRD----QNGNHVIQKCIECVPPAKINF 921
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQ 203
+ A N L+TH GC + + ++ G+++ I L++D GNYVVQ
Sbjct: 922 IISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQ 981
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I + L G+ ++S + S++VEK
Sbjct: 982 HVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEK 1018
>gi|358336596|dbj|GAA55061.1| pumilio homolog 2 [Clonorchis sinensis]
Length = 1498
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRF-KDMMFSKEASSVIIKCLETL 137
+ T YGC R +QK ++ + P + I + R + + + + VI KC+E +
Sbjct: 1180 EFATQMYGC---RVIQKALESV--PPDTKIRIVSELRPYVTRCVKDQNGNHVIQKCIECV 1234
Query: 138 DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPS 197
+ + + A L++H GC + + + +L+ + + L KD
Sbjct: 1235 QPSELDFIIAAFRGQVVSLSSHPYGCRVIQRILEHCLAEQTRPILEELHEGVDHLVKDQY 1294
Query: 198 GNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
GNYV+QHVL G +I L+G+ LS + S+++EK
Sbjct: 1295 GNYVIQHVLEHGLPGDKSRIIQSLRGRVSTLSAHKFASNVMEK 1337
>gi|340056635|emb|CCC50971.1| RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486]
Length = 540
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 9/215 (4%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
+ +QK+ + YK+ D+ +G S+QK+I+ + + ++
Sbjct: 246 ANFLVQKLFDIMPPDVRYKVAYVAAPKIADIALTPHGTF---SVQKMIETISTREEMEII 302
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
A R ++ + I K L+ D + E +Y A +A + +GC L
Sbjct: 303 REALSRDVVRLVKDANGNHAIQKVLQRFDHEDKEFIYAAVGADCVPIAKNKQGCCVLQRC 362
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ +R L+ I +++DP GNYV+Q+VL G+ + I ++ L
Sbjct: 363 LEYASPTQRSTLVKHILDCCLQIAEDPYGNYVLQYVLQSGN---NTTIDTIAIAFLPHLP 419
Query: 230 LLRCGSHLVEKYQRPSIFTP-CQHKYGNFVIQQAL 263
L+R VE P + Q +GN+V+Q AL
Sbjct: 420 LVR--EMYVETMCTPEVAARLIQDDFGNYVLQTAL 452
>gi|451995215|gb|EMD87684.1| hypothetical protein COCHEDRAFT_1034063 [Cochliobolus
heterostrophus C5]
Length = 889
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-----QK 95
+V + GS F+Q+ L +S + +F + + LM D +G ++ + Q
Sbjct: 510 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQT 569
Query: 96 LIKLLVGSPCISLVISAAYRRFKDMMFSK-------EASSVIIKCLE-----TLDEQK-- 141
K+LVG V+ A + + + K E + ++K LE T+ +Q
Sbjct: 570 QKKILVGK-MKGHVLELANQMYACRVVQKALEHALTEQQASMVKELEKDVLKTVKDQNGN 628
Query: 142 ---NEVLYLAAMNHFRELATHVRGCV---SLNNF--------INEMRGPRRGGLLDLISS 187
+V+ M+H +++ RG V S+N++ + ++ P+R +L + +
Sbjct: 629 HVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEEPQRRFILTELHA 688
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L D GNYV QHV+ G + KI +L+K +F S + S++VE+
Sbjct: 689 EGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNVVER 741
>gi|425773915|gb|EKV12240.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
PHI26]
gi|425782417|gb|EKV20327.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
Pd1]
Length = 904
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 58/279 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
+V + GS F+Q+ L +S ++F + LMTD +G H ++
Sbjct: 493 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQT 552
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A + KE + ++KC+ D+
Sbjct: 553 QKKILANQMRGHVLALSTQMYGCRVVQKALEHILTDQQAAMVKELENHVLKCVR--DQNG 610
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N FR LA H GC + + R +L +
Sbjct: 611 NHVIQKAIERVPSQHVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQSILAELH 670
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ GD K ++ ++ G+ S + S++VEK
Sbjct: 671 ACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVVEKSIEFGA 730
Query: 241 -YQRPSIFTP---------------CQHKYGNFVIQQAL 263
++R I + + +YGN+VIQ+ L
Sbjct: 731 EHERIHIISTLTSANDRGESPLLGLMRDQYGNYVIQKVL 769
>gi|414587978|tpg|DAA38549.1| TPA: hypothetical protein ZEAMMB73_234832 [Zea mays]
Length = 764
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 23/245 (9%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
++++L G+ +QK + ++ + + +L YGC R +QK++++
Sbjct: 457 NVIVLTTDVFGNYVIQKFFEFATESQLIQLADQLKGRILELSLQMYGC---RVVQKVLEV 513
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
+ + +V K + + + VI KC+E + E + + ++ L TH
Sbjct: 514 VGMDQKVDIVHELKNYILK-CIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTH 572
Query: 160 VRGCVSLNNFINEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
GC + + P + +++ I L+ D GNYVVQHVL G + I
Sbjct: 573 QYGCRVIQRVLEHCHDPVTQSAIMNEIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVII 632
Query: 219 SLLKGKFEELSLLRCGSHLVEK-------YQRPSIFTPC-----------QHKYGNFVIQ 260
L G+ LS + S+++EK +R S+ + ++GN+V+Q
Sbjct: 633 QKLSGQVVTLSKQKFASNVIEKCLEFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQ 692
Query: 261 QALRV 265
+ L
Sbjct: 693 KVLET 697
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 183 DLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
++ISS F L KD GNYVVQ VL D KY E I S +K EL G H+V +
Sbjct: 670 EIISSGQTFQELMKDQFGNYVVQKVLETCDDKYLEMILSSIKLHLNELKNYTYGKHIVAR 729
Query: 241 YQR 243
++
Sbjct: 730 VEK 732
>gi|125528359|gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + ++ + L YGC + + +++ L + ++ +
Sbjct: 761 GNYVVQKFFEHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTEL 820
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + L+TH GC +
Sbjct: 821 DGHIMRCVRD----QNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRV 876
Query: 170 INEMRGPRRGGL-LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ + +D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 877 LEHCTYPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQM 936
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 937 SQQKFASNVVEK 948
>gi|15236527|ref|NP_192596.1| pumilio 15 [Arabidopsis thaliana]
gi|75100238|sp|O81465.1|PUM15_ARATH RecName: Full=Pumilio homolog 15; Short=APUM-15; Short=AtPUM15
gi|3377818|gb|AAC28191.1| contains similarity to drosophila pumilio protein (GB:S22026)
[Arabidopsis thaliana]
gi|7267498|emb|CAB77981.1| putative self-incompatability RNA-binding protein [Arabidopsis
thaliana]
gi|332657258|gb|AEE82658.1| pumilio 15 [Arabidopsis thaliana]
Length = 477
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 29/245 (11%)
Query: 49 GGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G +F + M D IT ++ + V + PF+ + H ++Q L++ L IS
Sbjct: 200 GHKVFRKLMEKCTDEQIT-RVLDIVLEEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISR 258
Query: 109 VISAAYRRFKDMMFSKE--ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
+ + ++ +K+ A VI+ C L + + ++A GC L
Sbjct: 259 FMETLC--YVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCML 316
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSG----------NYVVQHVLGLGDLKYSEK 216
I + R L+ I S A L + G NYVVQ++L L D + +
Sbjct: 317 KKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSA 376
Query: 217 ICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTPCQ--------------HKYGNFVIQQA 262
+ L G + +LS + GSH+V+K F+ + YG++VIQ A
Sbjct: 377 LSKHLDGNYVQLSYDKYGSHVVQKCLESREFSSRRIIAELLSDIDSLLVDPYGDYVIQTA 436
Query: 263 LRVTK 267
V++
Sbjct: 437 WIVSE 441
>gi|406861814|gb|EKD14867.1| pumilio domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 948
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 109/277 (39%), Gaps = 58/277 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
+V + GS F+Q L +S ++F + LMTD +G ++ + + ++
Sbjct: 550 VVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQV 609
Query: 97 IKLLVGSPCISLVISAAYRRF---------------KDMMFSKEASSVIIKCLETLDEQK 141
K ++ + V+ + + + + ++E + ++KC++ D+
Sbjct: 610 QKRVLAEQMKNHVLELSLQMYGCRVVQKALEHVLADQQAELAQELRADVLKCVK--DQNG 667
Query: 142 NEVLYLA----AMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A H R LA H GC + + + + G+L+ +
Sbjct: 668 NHVVQKAIERVPTEHVRFIIEAFRGQVHTLAVHPYGCRVIQRILEYCKPHEQVGILEELH 727
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
L D GNYV QHV+ G + K+ ++ + ELS + S++VEK
Sbjct: 728 QCTAMLITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSKHKFASNVVEKCIEFGT 787
Query: 241 -YQRPSIFTPCQH---------------KYGNFVIQQ 261
QR +I H YGN+VIQ+
Sbjct: 788 HEQRRAIVNTVNHVHSNGISPLQLMIKDPYGNYVIQR 824
>gi|342183779|emb|CCC93258.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 556
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 108/281 (38%), Gaps = 58/281 (20%)
Query: 45 GKTEGGSLFLQKML--SGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL-- 100
K + G +LQ++L S D I I + + +LMTD Y L +QKL ++
Sbjct: 201 AKDQHGCRYLQRLLCDSDPDKDIPRTIMSEIVPHVDELMTDQYANFL---VQKLFDIMPA 257
Query: 101 --------VGSPCISLVISAAYRRF------------KDMMFSKEASS------------ 128
V +P I+ + + F ++++ +EA S
Sbjct: 258 DVRLKVATVAAPKIAAIALKPHGTFSVQKMIETISSQEELVIIREALSKDVVRLVKDANG 317
Query: 129 --VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
I K L+ E +Y A +A + +GC L + +R L+ I
Sbjct: 318 NHAIQKVLQRFGHADKEFIYAAVAADCVTIAKNKQGCCVLQRCLEHASPSQRSTLVRHIL 377
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+++DP GNYV+Q+V+ GD + I +L + + S+++EK
Sbjct: 378 GCCLEIAEDPYGNYVLQYVISTGDNNTIDTIAIAFLPHLVQLCINKFSSNVMEKVLGRVS 437
Query: 241 --YQRPSIFTPC---------QHKYGNFVIQQALRVTKGFQ 270
Q + C Q +GN+V+Q AL + Q
Sbjct: 438 LPVQEMYVNKMCSPEVAARLIQDDFGNYVLQTALTICSPAQ 478
>gi|298709331|emb|CBJ31267.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 729
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 22/235 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDG-YGCHLARSMQKLIKLLVGSPCISL 108
G+ QK+ D EAV D M + H R +QK+++L ++
Sbjct: 447 GNYLFQKLFVKVDDHQRLLAVEAVT----DRMPEAAVNLHGTRCVQKVVELCRTDAQAAV 502
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+ + + + V+ + L+ + +N+ + A ++A H GC L
Sbjct: 503 IARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQR 562
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
++ R L++ ++ + L +DP GNYVVQ+VL + + +CS G L
Sbjct: 563 CLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASL 622
Query: 229 SLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNFVIQQALRVT 266
S + S+++E Q+ I +Y N+V+Q+AL V
Sbjct: 623 STQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVA 677
>gi|71748656|ref|XP_823383.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833051|gb|EAN78555.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 843
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G + Y + +L YGC R +QK I+++ + +
Sbjct: 476 GNYVLQKLLEVGNARQLAYAATR-LQNNVVNLTLQTYGC---RVIQKCIEVMPPE-GLDI 530
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
++S + + + V+ KC+E + Q+ + A ELATH GC +
Sbjct: 531 ILSELRGNVAKCIQDQNGNHVVQKCVEVI-PQRCGFIVSAFSGRVMELATHAYGCRVIQC 589
Query: 169 FINEMRGPRRG---GLLDLISSHAEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGK 224
++ LLD + + L+ D GNYV+QHVL + D + +I LKG
Sbjct: 590 IMDHCPDQEEAIFSELLDCVGT----LATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGN 645
Query: 225 FEELSLLRCGSHLVEK 240
F E S + S+++EK
Sbjct: 646 FYESSKQKFASNVMEK 661
>gi|225443381|ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera]
Length = 1053
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + + R +D + + VI KC+E + +K
Sbjct: 782 YGCRVIQKALEVIELDQKTQLVHELDGHVIRCVRD----QNGNHVIQKCIECIPTEKIGF 837
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L++H GC + + + ++D I A L++D GNYV Q
Sbjct: 838 IISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQFIVDEILESAYVLAEDQYGNYVTQ 897
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G+ +I S L GK ++S + S+++EK
Sbjct: 898 HVLERGNPHERSQIISKLTGKIVQMSQHKYASNVIEK 934
>gi|448103094|ref|XP_004199945.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359381367|emb|CCE81826.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 44/258 (17%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------ARSMQ 94
V K + GS F+Q+ L IF + F+LMTD +G ++ +Q
Sbjct: 473 VEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQ 532
Query: 95 KLIKL-------------LVGSPCISLVISAA--------YRRFKDMMF----SKEASSV 129
K + L + G + + A KD + + + V
Sbjct: 533 KEVLLDCMKGHIYTLSMQMYGCRVVQRALEAIKVHQQISIIEELKDHILVCAKDQNGNHV 592
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
I K +E + ++ + + A N L+TH GC + + + +LD ++
Sbjct: 593 IQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEYSSPDDQRKILDELNRFI 652
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP 249
+L +D GNYV+QH+L G + E+I ++ G S + S+++EK
Sbjct: 653 FYLIQDQYGNYVMQHILERGSCEDREEILKVVLGSVVNFSKHKFASNVIEK--------- 703
Query: 250 CQHKYGNFVIQQALRVTK 267
C KYG+F +Q R+ K
Sbjct: 704 CI-KYGDF--EQRKRILK 718
>gi|261333325|emb|CBH16320.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 843
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 50 GSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ LQK+L G + Y + +L YGC R +QK I+++ + +
Sbjct: 476 GNYVLQKLLEVGNARQLAYAATR-LQNNVVNLTLQTYGC---RVIQKCIEVMPPE-GLDI 530
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
++S + + + V+ KC+E + Q+ + A ELATH GC +
Sbjct: 531 ILSELRGNVAKCIQDQNGNHVVQKCVEVI-PQRCGFIVSAFSGRVMELATHAYGCRVIQC 589
Query: 169 FINEMRGPRRG---GLLDLISSHAEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGK 224
++ LLD + + L+ D GNYV+QHVL + D + +I LKG
Sbjct: 590 IMDHCPDQEEAIFSELLDCVGT----LATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGN 645
Query: 225 FEELSLLRCGSHLVEK 240
F E S + S+++EK
Sbjct: 646 FYESSKQKFASNVMEK 661
>gi|161138144|gb|ABX58005.1| pumilio-like protein 1 [Echinococcus granulosus]
gi|161138146|gb|ABX58006.1| pumilio-like protein 1 [Echinococcus granulosus]
Length = 159
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + + + + A + ++TH GC + + + +L+ +
Sbjct: 3 VVQKCIEYVPSEHLQFIVDAFKGNVHSVSTHSYGCRVIQRILEHCSAEQTAPILEELHQC 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
AE L +D GNYV+QH+ G + ++ + L+G+ LS+ + S+++EK
Sbjct: 63 AESLFEDQYGNYVIQHIFEHGRTEEKSRMITRLRGRVAALSVHKFASNVIEK 114
>gi|123471212|ref|XP_001318807.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121901575|gb|EAY06584.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 407
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 91 RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM 150
R +Q+ I+ + + A + FS+ + ++ + + L ++ N ++ + +
Sbjct: 171 RVLQRFIECSTEMKNVDTLFKALLPNLMSLCFSQNGNHIVQRFVVALPDRLNTIIE-SIL 229
Query: 151 NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD 210
+ LA GC + + + + +++ + H+ L+ + GNYVVQ++L G
Sbjct: 230 PNVIPLAIDNCGCRIVQRLFEQYKINQLSLIVNEVMKHSVDLATNQYGNYVVQYILSSGQ 289
Query: 211 LKYSEKICSLLKGKFEELSLLRCGSHLVEK-----------------------YQRPSIF 247
+Y + KGKF S+ + S+++EK + P I
Sbjct: 290 TEYVSALLKSFKGKFYSFSIHKFASNVIEKCIRGASDQEREDIFDEIIGTSGNFNHPRIL 349
Query: 248 TPCQHKYGNFVIQQALRVTKGFQMT 272
+ + ++GN+VIQ+ + Q T
Sbjct: 350 SMVEDQFGNYVIQRIIEFGTPEQQT 374
>gi|123509694|ref|XP_001329922.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121912972|gb|EAY17787.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 408
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 116/312 (37%), Gaps = 65/312 (20%)
Query: 24 GPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD 83
PG + Q V + K + LQ ++ T IF A+Y + +L+ D
Sbjct: 73 APGAVVGTPVFTQQSLQYVKMAKDRSDCIQLQDQIARATPTERDTIFNALYPHMGELVCD 132
Query: 84 GYGCHLARSMQKL-------------------IKLLVGSP--C--------------ISL 108
G + +QKL ++ +V P C I
Sbjct: 133 GAANFV---IQKLCENITEEQQSRMLSFFLEDVQFIVDHPNGCRVLQKFIEQTSPKNIDP 189
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+ A RF ++ S+ + + + + + + E++ H EL GC +
Sbjct: 190 IFLALLPRFVELCSSQNGNHIAQRFIIKIPNRVPEIID-KIKGHVYELVVDNWGCRVIQQ 248
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ L+D + AE L+ + GNYVVQ++L G ++ + + G F E
Sbjct: 249 LFDRQPIQDLIPLVDEVLCRAETLATNQFGNYVVQNILNSGTPEHIQALIRAFTGHFYEF 308
Query: 229 SLLRCGSHLVEK-----------------------YQRPSIFTPCQHKYGNFVIQQALRV 265
S+ + S+++EK Y +P I ++GN+VIQ R+
Sbjct: 309 SMHKFASNVIEKCIRKANQQQQNMIFTEIIGPEENYNKPRIKEMVSDQFGNYVIQ---RI 365
Query: 266 TKGFQMTERNII 277
+ ++R+II
Sbjct: 366 IEFGTKSQRDII 377
>gi|302793089|ref|XP_002978310.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
gi|300154331|gb|EFJ20967.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
Length = 354
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 41/230 (17%)
Query: 48 EGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD------------------------ 83
+ GS F+Q+ L + +F+ V+ LMTD
Sbjct: 9 QHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELAQ 68
Query: 84 ------------GYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVII 131
YGC + + +++ + + +S + R +D + + VI
Sbjct: 69 QLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRD----QNGNHVIQ 124
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG-GLLDLISSHAE 190
KC+E + + + + A L+TH GC + + ++ G++ I
Sbjct: 125 KCIECVPADRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILRSTC 184
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G +I + L G+ ++S + S+++EK
Sbjct: 185 SLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEK 234
>gi|397646257|gb|EJK77194.1| hypothetical protein THAOC_00992 [Thalassiosira oceanica]
Length = 743
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 25/163 (15%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
I + L L Q+ + ++ A ++A H GC + ++ R L+D I
Sbjct: 384 AIQRILLKLPYQRTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSAARSHLVDRIVEK 443
Query: 189 AEFLSKDPSGNYVVQHVLGL-GDLKYSE-------KICSLLKGKFE----ELSLLRCGSH 236
+ L +D GNYVVQ+VL + GD + K+C L KF E L RC
Sbjct: 444 SLELMQDAYGNYVVQYVLDVCGDDEVHAICESVVGKVCVLAVQKFSSNVMEKCLERCTDR 503
Query: 237 LVEKY---------QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ E+Y R + P +GN+V+Q+AL V+ Q
Sbjct: 504 VREEYLNELNDSDRLRELMMDP----FGNYVVQRALSVSTHAQ 542
>gi|389629662|ref|XP_003712484.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
gi|351644816|gb|EHA52677.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
Length = 888
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM----QKL 96
+V + GS F+Q L +S +IF+ + LM D +G ++ + ++
Sbjct: 497 VVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKFFEHGNQV 556
Query: 97 IKLLVGSPCISLVISAAYRRFKDMMFSK-------EASSVIIKCLET------LDEQKNE 143
K + S ++S + + + K E + ++K LE D N
Sbjct: 557 QKKALASQMKGKMVSLSTEMYACRVVQKALEHVLVEQQAELVKELEVEIVRIIKDANGNH 616
Query: 144 VL----------YLA-AMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ Y++ M+ R +L+ H GC + + + ++ + H
Sbjct: 617 VVQKIIELVPRQYISFVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDADKATIMHELHQH 676
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
A L+ DP GNYV+QH++ G + +K+ S++ G+ LS + S++VE+
Sbjct: 677 APMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSKHKLASNVVER 728
>gi|302765685|ref|XP_002966263.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
gi|300165683|gb|EFJ32290.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
Length = 324
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 41/230 (17%)
Query: 48 EGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD------------------------ 83
+ GS F+Q+ L + +F+ V+ LMTD
Sbjct: 9 QHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELAQ 68
Query: 84 ------------GYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVII 131
YGC + + +++ + + +S + R +D + + VI
Sbjct: 69 QLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRD----QNGNHVIQ 124
Query: 132 KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG-GLLDLISSHAE 190
KC+E + + + + A L+TH GC + + ++ G++ I
Sbjct: 125 KCIECVPPDRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILRSTC 184
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++D GNYVVQHVL G +I + L G+ ++S + S+++EK
Sbjct: 185 SLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEK 234
>gi|406607197|emb|CCH41458.1| hypothetical protein BN7_999 [Wickerhamomyces ciferrii]
Length = 893
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 71/293 (24%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC-------------- 87
V K + GS F+Q+ L IF + + +LMTD +G
Sbjct: 560 VEFSKDQHGSRFIQQQLEISSDEENEVIFNEIREASLELMTDVFGNYVIQKYFEHGSDTQ 619
Query: 88 -------------HLA------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS----K 124
HL+ R +QK I+ + + IS++ KD + S +
Sbjct: 620 RQVLLEQMKNQVQHLSMQMYGCRVVQKAIEYVPLNDQISIIT-----ELKDSIVSCIKDQ 674
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
+ VI K +E + +K E + + L+TH GC + + + + +L+
Sbjct: 675 NGNHVIQKSIEKIPIEKIEFILDSLKTQIYHLSTHTYGCRVIQRLLEFSKPKDQEYILNE 734
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
++ FL +D GNYV+QH++ G + I + G + S + S++VEK
Sbjct: 735 LNKFTYFLIQDQFGNYVIQHIIEHGKPSERKLIVDTVLGSVVDFSKHKFASNVVEKCVIF 794
Query: 241 ---YQRPSIFTPC----------------------QHKYGNFVIQQALRVTKG 268
QR I + ++ N+V+Q+ + VTKG
Sbjct: 795 GDDEQRSLILDEVLKNNEKDDDKPVDDRSPLGLMMKDQFANYVVQKLVDVTKG 847
>gi|224113073|ref|XP_002316382.1| predicted protein [Populus trichocarpa]
gi|222865422|gb|EEF02553.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 104/269 (38%), Gaps = 43/269 (15%)
Query: 6 RRPDLNRGIGIANLSTSIGPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTI 65
RRP + G N T G++ + + Q +V + GS F+Q+ L
Sbjct: 648 RRPSSSSIEGFKNNKT----GSFEPSDIAGQ----VVEFSTDQYGSRFIQQKLETASVEE 699
Query: 66 TYKIFEAVYKYPFDLMTDGYGCHL---------------------------------ARS 92
KIF + + LMTD +G ++ R
Sbjct: 700 KNKIFPEIIPHARTLMTDVFGNYVIQKFLDHGTESQRLELVSRLTGNVLPLSLQMYGCRV 759
Query: 93 MQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNH 152
+QK ++++ +V+ K + + + VI KC+E + E + + + A
Sbjct: 760 IQKALEMIDVDRQTQIVVELDGSVIK-CIRDQNGNHVIQKCIECVPEDRIQFIISAFYGQ 818
Query: 153 FRELATHVRGCVSLNNFINEMRGPRRGGL-LDLISSHAEFLSKDPSGNYVVQHVLGLGDL 211
L+TH GC + + + + +D I L++D GNYV+QHVL G
Sbjct: 819 VLALSTHPYGCRVIQRVLEHCKDMNTQQIIMDEIMQSVYTLAQDQYGNYVIQHVLEHGKP 878
Query: 212 KYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ I S L G +S + S++VEK
Sbjct: 879 QERSAIISKLAGHIVLMSQQKFASNVVEK 907
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E + Q + + A L+TH GC + + + +L+
Sbjct: 963 QNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1022
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ H+E L +D GNYV+QHVL G + KI + ++GK LS + L EK
Sbjct: 1023 ELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFARTLWEK 1079
>gi|115504333|ref|XP_001218959.1| pumillio RNA binding protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|83642441|emb|CAJ16404.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 667
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKL---- 96
+V L T G L LS +D+ + + + + D +GCH+ R++Q
Sbjct: 259 VVELACTPDGRSMLINALSSQDAALVDTMVREIADDLERVALDVHGCHVLRALQSYASAE 318
Query: 97 -IKLLVGSPCISLVI-----SAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM 150
++LV +LV+ + R + +F + +I +D VL
Sbjct: 319 HTRILVSCFTETLVLNLCTATQHTRHILESLFQRR----LIDLQPIID-----VL----A 365
Query: 151 NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD 210
+H R LA +GC+S + + ++ L+ + + ++ DP GNYVVQ ++
Sbjct: 366 SHSRYLAATQQGCISFMHILEFCNEAQKKQLISPLVPYFAHVALDPFGNYVVQRIIQSIG 425
Query: 211 LKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L SE I S G+ +S + GS++VE+
Sbjct: 426 LDASEYITSCFAGELLNMSCNKFGSNVVEE 455
>gi|224112727|ref|XP_002316273.1| predicted protein [Populus trichocarpa]
gi|222865313|gb|EEF02444.1| predicted protein [Populus trichocarpa]
Length = 938
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ + + + L YGC + + ++++L + ++ +
Sbjct: 665 GNYVIQKFFEHGSASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTKMVTEL 724
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + + L+TH GC +
Sbjct: 725 DGHIMRCVRD----QNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRV 780
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + + ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 781 LEHCQDTKTQRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 840
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 841 SQQKFASNVIEK 852
>gi|261326153|emb|CBH08979.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 676
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKL---- 96
+V L T G L LS +D+ + + + + D +GCH+ R++Q
Sbjct: 263 VVELACTPDGRSMLINALSSQDAALVDTMVREIADDLERVALDVHGCHVLRALQSYASAE 322
Query: 97 -IKLLVGSPCISLVI-----SAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM 150
++LV +LV+ + R + +F + +I +D VL
Sbjct: 323 HTRILVSCFTETLVLNLCTATQHTRHILESLFQRR----LIDLQPIID-----VL----A 369
Query: 151 NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD 210
+H R LA +GC+S + + ++ L+ + + ++ DP GNYVVQ ++
Sbjct: 370 SHSRYLAATQQGCISFMHILEFCNEAQKKQLISPLVPYFAHVALDPFGNYVVQRIIQSIG 429
Query: 211 LKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L SE I S G+ +S + GS++VE+
Sbjct: 430 LDASEYITSCFAGELLNMSCNKFGSNVVEE 459
>gi|269860161|ref|XP_002649803.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220066744|gb|EED44216.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 509
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 42/248 (16%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDE 139
L T YGC R +QKLI + I+ +IS +++ S + VI KC++
Sbjct: 271 LSTHIYGC---RVIQKLIDFITD---ITFIISELQDHILELIASPNGNHVIQKCIDRSII 324
Query: 140 QKNEVLYLAAMNHFRE---LATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKD 195
+ + ++ L+ GC L E+ P + LL +I + + L D
Sbjct: 325 ENKIFINNIINEFEKDCISLSQQRYGCRVLQRLF-EISAPEKVDRLLGIIVDNIQELIND 383
Query: 196 PSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--------------- 240
GNYV+QH++ + K E I + ELS + S+++EK
Sbjct: 384 RYGNYVIQHLIQ-SNYKQKEIIFKYIISNAVELSRYKFSSNVIEKCVVNASKRELEQFLE 442
Query: 241 -------YQRPSIFTPCQHKYGNFVIQQAL-RVTKGFQMTERNIIQELGQSSFIQGI--V 290
+P++F C Y N+V+Q+ V +M + II +++ I +
Sbjct: 443 SFAQLAENNKPALFYMCTDMYANYVVQKFFDTVDDDLKMKMKAII-----GKYLKDIKAI 497
Query: 291 PFNFHVVS 298
PF H+++
Sbjct: 498 PFTKHILN 505
>gi|356558296|ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 982
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + + R +D + + VI KC+E++ +K
Sbjct: 739 YGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRD----QNGNHVIQKCIESIQTKKISF 794
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINE-MRGPRRGGLLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+ H GC + + M + ++D I L++D GNYV Q
Sbjct: 795 ILSAFRGQVATLSMHPYGCRVIQRVLEHCMDESQCQFIVDEILESVCALAQDQYGNYVTQ 854
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G + +I S L G +LS + S++VEK
Sbjct: 855 HVLERGKPQERSQILSKLSGHIVQLSQHKFASNVVEK 891
>gi|255566430|ref|XP_002524200.1| pumilio, putative [Ricinus communis]
gi|223536477|gb|EEF38124.1| pumilio, putative [Ricinus communis]
Length = 1011
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++++L + +S + R +D + + VI KC+E + E +
Sbjct: 758 YGCRVIQKAIEVVELDQQTKMVSELDGHIMRCVRD----QNGNHVIQKCIECVPEDAIQF 813
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ + L+TH GC + + + ++D I L++D GNYVVQ
Sbjct: 814 IVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQ 873
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 874 HVLEHGKPHERSSIIKKLTGQIVQMSQQKFASNVIEK 910
>gi|389748876|gb|EIM90053.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 400
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 58/289 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSM----QK 95
+V + GS F+Q+ L S +F E V L+ D +G ++ + + +
Sbjct: 44 VVEFSGDQHGSRFIQQKLESASSEEKQFVFDEIVPSNALALIQDVFGNYVIQKLFEHGTQ 103
Query: 96 LIKLLVGSPCISLVISAAYRRF---------------KDMMFSKEASSVIIKCLETLDEQ 140
+ K ++ + + ++S + + + + +F KE +++C++ D
Sbjct: 104 VQKTVLATSMETHILSLSLQMYGCRVVQKAVEYILPEQQSIFVKELEPHVLRCVK--DAN 161
Query: 141 KNEVL-------------YLAAMN-HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ ++ + H EL+TH GC L + + LL+ +
Sbjct: 162 GNHVIQKLIERVAPERLGFVPSFQGHVWELSTHPYGCRVLQRCFEHLAEDQTRPLLEELH 221
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS- 245
H L +D GNYV+Q+VL G + I + L+G+ +S + S++ EK +
Sbjct: 222 KHTRNLMQDQFGNYVIQYVLEHGKPQDRNLIINQLRGQMMAMSRHKFASNVCEKALVTAD 281
Query: 246 ---------------------IFTPCQHKYGNFVIQQALRVTKGFQMTE 273
I T + +Y N+V+Q+A+ V +G Q E
Sbjct: 282 SASRRQLIDEIMVPRHDGASPIITMMKDQYANYVLQRAMVVAEGDQRDE 330
>gi|403415667|emb|CCM02367.1| predicted protein [Fibroporia radiculosa]
Length = 845
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 85 YGCHLARSMQKLIKLLVG---SPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK ++ ++ S + + ++ R KD + VI K +E + ++
Sbjct: 580 YGC---RVVQKAVEHVLPEQQSNFVKELDASVLRCVKDA----NGNHVIQKLIERVPPER 632
Query: 142 NEVLYLAAMN-HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
++++ A + +LATH GC L + LLD + H L +D GNY
Sbjct: 633 --LMFIKAFKGNVYDLATHPYGCRVLQRCFEHLPDEYTRPLLDELHKHVTHLMQDQFGNY 690
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------------------YQ 242
VVQ VL G + + + L+G+ ++ + S++VEK
Sbjct: 691 VVQFVLEHGKAQDRAVVITKLRGQMLHMARHKFASNVVEKALITADLENRRALIDEIMAG 750
Query: 243 RPS----IFTPCQHKYGNFVIQQALRVTKGFQ 270
+P I T + ++ N+V+Q+AL V +G Q
Sbjct: 751 KPDGISPILTMMKDQFANYVLQRALSVVEGEQ 782
>gi|221504265|gb|EEE29940.1| pumilio, putative [Toxoplasma gondii VEG]
Length = 1913
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 36/249 (14%)
Query: 44 LGKTEGGSLFLQKML-SGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVG 102
L + G+ LQK +G D + + + + F L + YGC R +Q+ ++ L
Sbjct: 1036 LAVDQHGNYVLQKFFETGSDKEKEW-LAAQLTDHVFRLSLEVYGC---RVIQRAVESLPV 1091
Query: 103 SPCISLVISAAYRRFKDMMFS----KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
+ LV R KD + + + + VI KC E L + + A ++
Sbjct: 1092 PAQLRLV-----RELKDHVITCVEDQHGNHVIQKCAERLPSPSVQFIIDAFKGQEARMSV 1146
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
H GC + + + L+D++ + L +D GNYVVQHVL G KI
Sbjct: 1147 HSYGCRVIQRLLEACPMSQVAALIDVVMAELCMLIRDQFGNYVVQHVLEFGRDADKMKII 1206
Query: 219 SLLKGKFEELSLLRCGSHLVEK--------YQRPSIFT----------PCQ----HKYGN 256
+ LS + ++VE+ R I T P + +YGN
Sbjct: 1207 DFMCEDIIALSTEKYACNVVERALTLNAMGRARRRIITAALGPEMMGQPLKMVMLDRYGN 1266
Query: 257 FVIQQALRV 265
+V+Q+ + V
Sbjct: 1267 YVVQRMMEV 1275
>gi|449438629|ref|XP_004137090.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 192
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 192 LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQ--------- 242
LSK P GNYV+Q ++ L +I L KF ELS+ + GS++VEK
Sbjct: 54 LSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISND 113
Query: 243 ----------RPSIFTPCQHKYGNFVIQQALRVTKG 268
R + C ++YGNFV+Q + + KG
Sbjct: 114 IIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKG 149
>gi|335892195|pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
gi|335892196|pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 26/240 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + E + + L YGC R +QK ++ + +V
Sbjct: 72 GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGC---RVIQKALEFIPSDQQNEMV 128
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K + + + V+ KC+E + Q + + A L+TH GC +
Sbjct: 129 RELDGHVLK-CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI 187
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + +L+ + H E L +D G+YV++HVL G + KI + ++G LS
Sbjct: 188 LEHCLPDQTLPILEELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVLS 247
Query: 230 LLRCGSHLVEKY----------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
+ S++VEK +++T + +Y N+V+Q+ + V +
Sbjct: 248 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 307
>gi|296814620|ref|XP_002847647.1| APUM2 [Arthroderma otae CBS 113480]
gi|238840672|gb|EEQ30334.1| APUM2 [Arthroderma otae CBS 113480]
Length = 916
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 34/245 (13%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + + + + + + L YGC R++QK ++ ++ ++V
Sbjct: 564 GNYVIQKLFEHGNQAQKRLLAQQMQGHIYSLSVQTYGC---RTVQKALEHVLVEQQATMV 620
Query: 110 ISAAYRRFKDMMF----SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVS 165
+ +D + ++ + VI K +E + + + ATH GC
Sbjct: 621 -----KELEDSVMKCVTNQNGNHVIQKAIERVPNEHIRFIIDEFRGQIPRYATHTYGCRV 675
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + R +L I + L D GNYV+QH++ G+ KI S++ G+
Sbjct: 676 IQRMLEHCPLADRLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQA 735
Query: 226 EELSLLRCGSHLVEKY-------QR---PSIFTPCQHK------------YGNFVIQQAL 263
S + S++VEK QR I + K YGN+VIQ++L
Sbjct: 736 VHFSKHKFASNVVEKSITFGTLEQRLGITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 795
Query: 264 RVTKG 268
V +G
Sbjct: 796 SVLEG 800
>gi|218194334|gb|EEC76761.1| hypothetical protein OsI_14838 [Oryza sativa Indica Group]
Length = 756
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
GS F+Q+ L + KIF + L TD +G ++ +QK + S +S +
Sbjct: 462 GSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYV---IQKFFEFATESQ-LSQL 517
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLD-EQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
F + F V+ K ++ +D E+K ++ EL V C+S N
Sbjct: 518 ADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVG--------ELKNSVLRCISDQN 569
Query: 169 ----FINEMRGP-RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKG 223
+ P + ++D I A L++D GNYVVQHVL G + I L G
Sbjct: 570 GNHRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSG 629
Query: 224 KFEELSLLRCGSHLVEK 240
+ LS + S++VEK
Sbjct: 630 QVVNLSQQKYASNVVEK 646
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 177 RRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCG 234
R G + +++SS F L KD GNYVVQ +L D K+ I S +K EL G
Sbjct: 656 REGLIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNYTFG 715
Query: 235 SHLVEKYQR 243
H+V + ++
Sbjct: 716 KHIVARVEK 724
>gi|326512890|dbj|BAK03352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 603
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 279 IVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 338
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 339 QRRDLAAKLAGHVVPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGNIMRCVRD----Q 394
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G RG ++D
Sbjct: 395 NGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIID 454
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHV+ G +I S L G+ +S + S+++EK
Sbjct: 455 EILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 511
>gi|8071634|gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + R D + + VI KC+E + + E
Sbjct: 749 YGCRVIQKALEVIELDQKAKLAQELDGHVMRCVHD----QNGNHVIQKCIECVPAEHIEF 804
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+TH GC + + + ++D I + L++D GNYV Q
Sbjct: 805 IISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESSYLLAQDQYGNYVTQ 864
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I S L GK ++S + S++VEK
Sbjct: 865 HVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEK 901
>gi|339246841|ref|XP_003375054.1| pumilio protein [Trichinella spiralis]
gi|316971694|gb|EFV55440.1| pumilio protein [Trichinella spiralis]
Length = 369
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 42/272 (15%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + + GS F+Q+ L + +F + + LMTD +G +
Sbjct: 48 VVEFAQDQYGSRFIQQKLERANMQDRQMVFSEIIESAQMLMTDVFGNYVIQKFFEFGTVE 107
Query: 89 ----LARSMQKLIKLL--------VGSPCISLVISAAYRRF-KDM-------MFSKEASS 128
LAR ++ + L V C+ V R K++ + + +
Sbjct: 108 QKNELARVLRPNVLALALQMYGCRVIQKCLEAVDHEQQREIVKELEGNILKCVKDQNGNH 167
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI K +ET+D + + + A + L+TH GC + + ++ +L+ + H
Sbjct: 168 VIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRILEHCMMEQKKPILEELHQH 227
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
+ L D GNYV+QHVL G + +I ++ + S + S++VEK
Sbjct: 228 IKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYSQHKFASNVVEKCVCFATAE 287
Query: 242 QRPSIF---TPCQHKYGNFVIQQALRVTKGFQ 270
+R + + +Y N+V+Q+ L V Q
Sbjct: 288 ERNCLIILVAMMKDQYANYVVQKLLDVADPSQ 319
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 29/214 (13%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+I+ K + G+ +QK++ D + +A F L T YGC + + + + +
Sbjct: 155 NILKCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRILEHCMM 214
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLE---------TLDEQKNEVLYLAAM 150
P ++ ++ K ++ + + VI LE + E + E+L +
Sbjct: 215 EQKKP----ILEELHQHIKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYSQ- 269
Query: 151 NHFRELATHV-RGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLG 209
+ A++V CV R L+ L++ + KD NYVVQ +L +
Sbjct: 270 ---HKFASNVVEKCVCFAT------AEERNCLIILVA-----MMKDQYANYVVQKLLDVA 315
Query: 210 DLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
D +++ ++ +L G H++ K ++
Sbjct: 316 DPSQRKRLMQNIRPHVPQLRRFTYGKHILSKLEK 349
>gi|324503008|gb|ADY41314.1| Maternal protein pumilio [Ascaris suum]
Length = 736
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 43/240 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
+V + + GS F+Q+ L +FE V + LMTD +G ++ +
Sbjct: 392 VVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVFGNYVIQKFFEYGTPE 451
Query: 94 --QKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQ 140
+L + G+ ++L VI A + M KE ++KC++ D+
Sbjct: 452 QKNQLTSAIKGN-VMNLALQMYGCRVIQKALESIEPNQQMEILKEMEGQVLKCVK--DQN 508
Query: 141 KNEVL--YLAAMNHFR------------------ELATHVRGCVSLNNFINEMRGPRRGG 180
N V+ + ++ R L+TH GC + + ++
Sbjct: 509 GNHVVQKVIERVDPSRLQFIIDAFVQPGDNLTVCNLSTHPYGCRVIQRVLEHCTEEQKRP 568
Query: 181 LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+LD + H + L D GNYV+QHV+ G ++ ++I + +KG + + S+++EK
Sbjct: 569 VLDQLHMHIKTLVVDQYGNYVIQHVIEHGSMEDRDRIVNQIKGDVLRFAQHKFASNVIEK 628
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 134 LETLDEQKNEVLYLAAM-NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL 192
L+ +N L L+ + NH E A G + + + + + +++HA+ L
Sbjct: 372 LDDFRNNRNPHLQLSDLGNHVVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSL 431
Query: 193 SKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
D GNYV+Q G + ++ S +KG L+L G +++K
Sbjct: 432 MTDVFGNYVIQKFFEYGTPEQKNQLTSAIKGNVMNLALQMYGCRVIQK 479
>gi|255566432|ref|XP_002524201.1| pumilio, putative [Ricinus communis]
gi|223536478|gb|EEF38125.1| pumilio, putative [Ricinus communis]
Length = 999
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + + L YGC + + ++++L + ++ +
Sbjct: 713 GNYVIQKFFEHGSAAQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTKMVAEL 772
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + + L+TH GC +
Sbjct: 773 DGHIMRCVRD----QNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRV 828
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 829 LEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQM 888
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 889 SQQKFASNVIEK 900
>gi|145547968|ref|XP_001459665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427491|emb|CAK92268.1| unnamed protein product [Paramecium tetraurelia]
Length = 640
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 69 IFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
I + + D+ D G H ++Q L+ L+ +V ++ ++ + +
Sbjct: 391 ILQTISNRLVDIACDKKGTH---AIQSLVSLISSKQEEEMVENSIKNHIINLTLDSQGTH 447
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
+I K + E + +++ M F ++ H G L + I + + LI
Sbjct: 448 LIKKIIARFSEDRLNLIFSKLMEKFIQVVNHQFGLCVLKDLITKFKNNPEKCTFILIKMR 507
Query: 189 AEF--LSKDPSGNYVVQHVLGL-GDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
+ + +DP GNY VQH + + GDLK + I +L+ K +LS+ + S++VEK
Sbjct: 508 DQLDDIVQDPFGNYGVQHAIDVYGDLKCTPIIDKILQ-KLVQLSIHKYSSNVVEKCILET 566
Query: 241 --------YQRPSIFTPC----QHKYGNFVIQQALR 264
++ S C ++K+G FV+Q+AL+
Sbjct: 567 SAKTQKRFIKQLSQDVICLELMKNKFGTFVLQKALQ 602
>gi|300123698|emb|CBK24970.2| unnamed protein product [Blastocystis hominis]
Length = 389
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + VI + ++T D +Y + ++A G + L ++ R+ L
Sbjct: 178 ERGTHVIQRIIKTFDISLWTPIYSILLEKCYDVARDRNGSMVLRLCYGQVDIDRKEDLAR 237
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK----------ICSLLKGKFEELSLLRC 233
+I HA+ LS DP GNYVVQH+L L D EK I S L G + ELS +
Sbjct: 238 VIIQHAKDLSADPVGNYVVQHILMLPDAYSEEKLARYYSIIRGILSKLAGHYLELSKQKY 297
Query: 234 GSHLVEK 240
S++VEK
Sbjct: 298 SSNVVEK 304
>gi|9759249|dbj|BAB09773.1| unnamed protein product [Arabidopsis thaliana]
Length = 250
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 47/195 (24%)
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
++++QKL+ + A R F +M K AS V I+ + + K E++Y
Sbjct: 43 SKTLQKLMGM--SDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKRELMY--- 97
Query: 150 MNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLG 209
+ A + G +A LS D GN+VVQHVL L
Sbjct: 98 -DQILRYACFLAG-----------------------DQYALLLSNDAYGNFVVQHVLKLR 133
Query: 210 DLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------------------QRPSIFTPCQ 251
D + + I L G ELS + GS++VE+ + + +
Sbjct: 134 DSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEMLIRLAR 193
Query: 252 HKYGNFVIQQALRVT 266
+YGNFV+ +AL +T
Sbjct: 194 SEYGNFVVCKALELT 208
>gi|303280035|ref|XP_003059310.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459146|gb|EEH56442.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 429
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK L+ I + + L YGC R +QK ++++ +LV
Sbjct: 70 GNYVVQKFLANGTPEQIDAIAGELKGHVLSLSLQMYGC---RVIQKALEVIDEDAQCALV 126
Query: 110 IS---AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
R +D + + V+ KC+E + K + + A + L+TH GC +
Sbjct: 127 AELEGHVSRCVRD----QNGNHVVQKCIECVAPAKIQFIVEAFYGNVLSLSTHPYGCRVI 182
Query: 167 N----NFINEMRGPRRG--GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSL 220
+++ E P + G++D I A L++D GNYVVQHVL G + I
Sbjct: 183 QARSIHWVLEHCTPEQKSEGIMDEILREATSLAQDQYGNYVVQHVLQHGGEGERKTILQT 242
Query: 221 LKGKFEELSLLRCGSHLVEK 240
L G+ L+ + S+++EK
Sbjct: 243 LAGQIVLLAQHKFASNVIEK 262
>gi|393245475|gb|EJD52985.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 35/247 (14%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + + + L YGC R +QK I+ ++ S V
Sbjct: 88 GNYVIQKLFEYGTQVQKTALANTMENHILQLSLQMYGC---RVVQKAIEYILPEQQASFV 144
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFR----ELATHVRGCVS 165
K +M + VI K +E + ++ L ++ FR EL+TH GC
Sbjct: 145 KELEAHVLKIVM-DANGNHVIQKLIERVSPER-----LGFVHSFRGSVYELSTHPFGCRV 198
Query: 166 LNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
L + + LLD + + L +D GNYVVQ VL G + I S L+G+
Sbjct: 199 LQRCFEYLTDDQTRPLLDELHKYTSNLMQDQFGNYVVQFVLEHGKPEDRLLIISRLRGQM 258
Query: 226 EELSLLRCGSHLVEKY--------QR---PSIFTP-----------CQHKYGNFVIQQAL 263
++ + S++ EK QR I TP + ++ N+V+Q+AL
Sbjct: 259 LHMAKHKFASNVCEKALITADEENQRLLIDEIMTPRADGFSPVVTMMKDQFANYVLQRAL 318
Query: 264 RVTKGFQ 270
V G Q
Sbjct: 319 SVATGEQ 325
>gi|302504613|ref|XP_003014265.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
gi|291177833|gb|EFE33625.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
Length = 883
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + GS F+Q L +S ++F+ + LM D +G ++ + +
Sbjct: 485 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 544
Query: 94 QK--LIKLLVGSPCISLVISAAYRRFKDMM----------FSKEASSVIIKCLETLDEQK 141
QK L + + G+ C V + R + + KE ++KC+ ++
Sbjct: 545 QKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCV--TNQNG 602
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A ++ FR ATH GC + + R +L I
Sbjct: 603 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 662
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QH++ G+ KI S++ G+ S + S++VEK
Sbjct: 663 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGT 722
Query: 242 --QRPSIFT-----------P----CQHKYGNFVIQQALRVTKG 268
QR +I P + +YGN+VIQ++L V +G
Sbjct: 723 MEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEG 766
>gi|302654395|ref|XP_003019005.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
gi|291182695|gb|EFE38360.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
Length = 851
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + GS F+Q L +S ++F+ + LM D +G ++ + +
Sbjct: 453 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 512
Query: 94 QK--LIKLLVGSPCISLVISAAYRRFKDMM----------FSKEASSVIIKCLETLDEQK 141
QK L + + G+ C V + R + + KE ++KC+ ++
Sbjct: 513 QKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCV--TNQNG 570
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A ++ FR ATH GC + + R +L I
Sbjct: 571 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 630
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QH++ G+ KI S++ G+ S + S++VEK
Sbjct: 631 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGT 690
Query: 242 --QRPSIFT-----------P----CQHKYGNFVIQQALRVTKG 268
QR +I P + +YGN+VIQ++L V +G
Sbjct: 691 MEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEG 734
>gi|227204207|dbj|BAH56955.1| AT4G25880 [Arabidopsis thaliana]
Length = 806
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 32/232 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARS-------- 92
IV + GS F+Q+ L +F + + LMTD +G ++ +
Sbjct: 480 IVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 539
Query: 93 ---------MQKLIKLLVGSPCISL-----VISAAYR---------RFKDMMFSKEASSV 129
M +++ LL C + VI R + + + + V
Sbjct: 540 QRKELADQLMGQIVPLLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHV 599
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL-DLISSH 188
I KC+E + K + A L+ H GC + + + + + I
Sbjct: 600 IQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILES 659
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
LSKD GNYV QHVL G + E+I L G +LSL + S+++EK
Sbjct: 660 VCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEK 711
>gi|224098451|ref|XP_002311179.1| predicted protein [Populus trichocarpa]
gi|222850999|gb|EEE88546.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ ++ + + + L YGC + + ++++L + ++ +
Sbjct: 712 GNYVIQKFFEHGSASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTKMVTEL 771
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + + L+TH GC +
Sbjct: 772 NGHILRCVRD----QNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRV 827
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 828 LEHCHDTKTQRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 887
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 888 SQQKFASNVIEK 899
>gi|190348753|gb|EDK41273.2| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR---------S 92
V K + GS F+Q+ L + IF + + ++LMTD +G ++ +
Sbjct: 424 VEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQ 483
Query: 93 MQKLIKLLVGSPC-ISL------VISAAYR------------RFKDMMF----SKEASSV 129
Q L+K ++G +SL V+ A +D + + + V
Sbjct: 484 KQVLLKFMIGHIYELSLQMYGCRVVQRALEAVDLKGQISIIDELRDHILVCAKDQNGNHV 543
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
I K +E + + + + + L+TH GC + + R+ +LD ++
Sbjct: 544 IQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKRQQEMLDELNRFI 603
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+L +D GNYV+QH+L G K E I ++ G S + S+++EK
Sbjct: 604 FYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEK 654
>gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDLISS 187
VI KC+E + +++ + A H EL+TH GC + + + +++ I
Sbjct: 792 VIQKCIECIPQERIRFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQSTMMEEIMQ 851
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L+ D GNYV+QHVL G I L G+ ++S + S++VEK
Sbjct: 852 SVVLLTLDQYGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVVEK 904
>gi|262411024|gb|ACY66878.1| P30Sh115J16 [Saccharum hybrid cultivar R570]
Length = 764
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 440 IVEYSADQHGSRFIQQKLENCTAEEKASVFAEVLPHASSLMTDVFGNYVIQKFFEHGTRE 499
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLV---ISAAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 500 QRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHVMRCVRD----Q 555
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G +G ++D
Sbjct: 556 NGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNSQGQCIID 615
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHVL G +I + L G+ +S + S+++EK
Sbjct: 616 EILQSACILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEK 672
>gi|146412760|ref|XP_001482351.1| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR---------S 92
V K + GS F+Q+ L + IF + + ++LMTD +G ++ +
Sbjct: 424 VEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQ 483
Query: 93 MQKLIKLLVGSPC-ISL------VISAAYR------------RFKDMMF----SKEASSV 129
Q L+K ++G +SL V+ A +D + + + V
Sbjct: 484 KQVLLKFMIGHIYELSLQMYGCRVVQRALEAVDLKGQILIIDELRDHILVCAKDQNGNHV 543
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
I K +E + + + + + L+TH GC + + R+ +LD ++
Sbjct: 544 IQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKRQQEMLDELNRFI 603
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+L +D GNYV+QH+L G K E I ++ G S + S+++EK
Sbjct: 604 FYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEK 654
>gi|406607837|emb|CCH40775.1| putative translational repressor [Wickerhamomyces ciferrii]
Length = 729
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK++ + + E ++ Y F + + YG RS+QK+I + + I L+
Sbjct: 315 GNYLIQKLIDYLSNYQKDLLIEKIHTYLFLISINQYG---TRSLQKIIDKVSNTYQIDLI 371
Query: 110 I--------------SAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLY--LAAMNHF 153
I + + KD+ + VI KC+ +K + + + N+
Sbjct: 372 IKGLQINDVTNGIDDNNIVKLIKDL----NGNHVIQKCIFKFPPEKFQFIIDSICINNNI 427
Query: 154 RELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKY 213
++TH GC L +N + + ++ + + L D GNY++Q + L LK
Sbjct: 428 VRISTHKHGCCVLQKLLNNANFNQILNIAKMLLIYLDDLINDQFGNYIIQFLFELNFLKT 487
Query: 214 SEKICSLLKGKFE-------ELSLLRCGSHLVEKY 241
S+ I L+ F +LS L+ S++VEK+
Sbjct: 488 SKNISFLIDEFFNKIYNNLIQLSCLKFSSNVVEKF 522
>gi|326506354|dbj|BAJ86495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 520 IVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 579
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 580 QRRDLAAKLAGHVVPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGNIMRCVRD----Q 635
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G RG ++D
Sbjct: 636 NGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIID 695
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHV+ G +I S L G+ +S + S+++EK
Sbjct: 696 EILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 752
>gi|255733004|ref|XP_002551425.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131166|gb|EER30727.1| predicted protein [Candida tropicalis MYA-3404]
Length = 675
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 88 HLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
H R+ QKLI ++ I+++I +++ + +I K + L E+ Y
Sbjct: 451 HGTRAFQKLIDVIETEEEINIIIDKVSPHVVTLIYDSNGNHLIQKIITKLAP---EIFYE 507
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
++ +A H GC L ++ +R L IS + LS DP GNYV+Q++L
Sbjct: 508 IICDNLFSIACHRHGCCVLQKCLDHGSESQRKQLSLEISKYTFELSLDPFGNYVIQYILK 567
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP----------------CQ 251
GD + + + +K L + GS+++E R I +
Sbjct: 568 KGDKESIDTLLEKIKFNLINLCTNKFGSNIIECLLRIPILSTELINCLIEKSDEFYKMVN 627
Query: 252 HKYGNFVIQQALRVTK 267
+GN+VIQ +L V+
Sbjct: 628 DPFGNYVIQTSLDVSN 643
>gi|79609613|ref|NP_974618.2| pumilio 6 protein [Arabidopsis thaliana]
gi|332659728|gb|AEE85128.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 855
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK +ST ++ + + L YGC R +QK + ++ + L
Sbjct: 576 GNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGC---RVIQKALDVIEPDQRVRLA 632
Query: 110 IS---AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
R +D + + VI KC+E + K + A L+ H GC +
Sbjct: 633 RELDGQVMRCVRD----QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 167 NNFINEMRGPRRGGLL-DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + + I LSKD GNYV QHVL G + E+I L G
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 226 EELSLLRCGSHLVEK 240
+LSL + S+++EK
Sbjct: 749 VQLSLHKFASNVIEK 763
>gi|255080292|ref|XP_002503726.1| predicted protein [Micromonas sp. RCC299]
gi|226518993|gb|ACO64984.1| predicted protein [Micromonas sp. RCC299]
Length = 806
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++ + ++ + R +D + + VI KC+E + + +
Sbjct: 522 YGCRVIQKALEVFDEAQQTAMVNELDGHVLRCVRD----QNGNHVIQKCIERVPPARIQF 577
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG-GLLDLISSHAEFLSKDPSGNYVVQ 203
+ + + L+TH GC + + ++ G++D I A L++D GNYVVQ
Sbjct: 578 IVSSFYGNVLSLSTHPYGCRVIQRVLEHCTPEQKTEGIMDEILREAVQLAQDQYGNYVVQ 637
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G KI + L G+ L+ + S+++EK
Sbjct: 638 HVLQHGGEDERRKILATLAGQIVILAQHKFASNVIEK 674
>gi|315053707|ref|XP_003176228.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311338074|gb|EFQ97276.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 914
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + GS F+Q L +S ++F+ + LM D +G ++ + +
Sbjct: 515 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 574
Query: 94 QK--LIKLLVGSPCISLVISAAYRRFKDMM----------FSKEASSVIIKCLETLDEQK 141
QK L + + G+ C V + R + + KE ++KC+ ++
Sbjct: 575 QKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCV--TNQNG 632
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A ++ FR ATH GC + + R +L I
Sbjct: 633 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 692
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QH++ G+ KI S++ G+ S + S++VEK
Sbjct: 693 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGT 752
Query: 242 --QRPSIFT-----------P----CQHKYGNFVIQQALRVTKG 268
QR +I P + +YGN+VIQ++L V +G
Sbjct: 753 MEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEG 796
>gi|224100489|ref|XP_002311896.1| predicted protein [Populus trichocarpa]
gi|222851716|gb|EEE89263.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ E + L YGC + + ++I+L + +
Sbjct: 60 GNYVIQKFFEHGSPEQRMELAEKLSGQILQLSLQMYGCRVIQKALEVIELDQKAKLAQEL 119
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R D + + VI KC+E + + E + A L+TH GC +
Sbjct: 120 DGHVMRCVHD----QNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRV 175
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + ++D I + L++D GNYV QHVL G +I S L GK ++
Sbjct: 176 LEHCSDELQSQCIVDEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQM 235
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 236 SQHKYASNVVEK 247
>gi|79325269|ref|NP_001031720.1| pumilio 6 protein [Arabidopsis thaliana]
gi|332659729|gb|AEE85129.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 858
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL- 108
G+ +QK +ST ++ + + L YGC R +QK + ++ + L
Sbjct: 576 GNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGC---RVIQKALDVIEPDQRVRLA 632
Query: 109 --VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
+ R +D + + VI KC+E + K + A L+ H GC +
Sbjct: 633 RELDGQVMRCVRD----QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 167 NNFINEMRGPRRGGLL-DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + + I LSKD GNYV QHVL G + E+I L G
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 226 EELSLLRCGSHLVEK 240
+LSL + S+++EK
Sbjct: 749 VQLSLHKFASNVIEK 763
>gi|115386338|ref|XP_001209710.1| hypothetical protein ATEG_07024 [Aspergillus terreus NIH2624]
gi|114190708|gb|EAU32408.1| hypothetical protein ATEG_07024 [Aspergillus terreus NIH2624]
Length = 882
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 91/234 (38%), Gaps = 36/234 (15%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L +S ++F + LMTD +G +
Sbjct: 491 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIKGDCLQLMTDVFGNYVVQKLFEHGNQT 550
Query: 89 ----LARSMQKLIKLLVGSPCISLVISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
LA M+ I +L V+ A + KE +IKC+ D+
Sbjct: 551 QKKVLANQMKGHIVMLSLQMYGCRVVQKALEHILTDQQAAMVKELEGHVIKCVR--DQNG 608
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A MN FR +LA H GC + + + R +L +
Sbjct: 609 NHVIQKAIERVPSEHIQFIMNDFRGSVDKLAAHPYGCRVIQRMLEHCKEEDRESILGELH 668
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
S L D GNYV+QHV+ G K ++ +++ S + S++VEK
Sbjct: 669 SCTAKLIPDQFGNYVIQHVITNGQEKDRTRMITVVMSNLLNFSKHKFASNVVEK 722
>gi|18416639|ref|NP_567733.1| pumilio 6 protein [Arabidopsis thaliana]
gi|75168940|sp|Q9C5E7.1|PUM6_ARATH RecName: Full=Pumilio homolog 6, chloroplastic; Short=APUM-6;
Short=AtPUM6; Flags: Precursor
gi|13430772|gb|AAK26008.1|AF360298_1 putative pumilio protein [Arabidopsis thaliana]
gi|22136912|gb|AAM91800.1| putative pumilio protein [Arabidopsis thaliana]
gi|227206416|dbj|BAH57263.1| AT4G25880 [Arabidopsis thaliana]
gi|332659727|gb|AEE85127.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 861
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK +ST ++ + + L YGC R +QK + ++ + L
Sbjct: 582 GNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGC---RVIQKALDVIEPDQRVRLA 638
Query: 110 IS---AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
R +D + + VI KC+E + K + A L+ H GC +
Sbjct: 639 RELDGQVMRCVRD----QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 167 NNFINEMRGPRRGGLL-DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + + I LSKD GNYV QHVL G + E+I L G
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 226 EELSLLRCGSHLVEK 240
+LSL + S+++EK
Sbjct: 755 VQLSLHKFASNVIEK 769
>gi|327309080|ref|XP_003239231.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
gi|326459487|gb|EGD84940.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
Length = 910
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + GS F+Q L +S ++F+ + LM D +G ++ + +
Sbjct: 512 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 571
Query: 94 QK--LIKLLVGSPCISLVISAAYRRFKDMM----------FSKEASSVIIKCLETLDEQK 141
QK L + + G+ C V + R + + KE ++KC+ ++
Sbjct: 572 QKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCV--TNQNG 629
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A ++ FR ATH GC + + R +L I
Sbjct: 630 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 689
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
+ L D GNYV+QH++ G+ KI S++ G+ S + S++VEK
Sbjct: 690 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGT 749
Query: 242 --QRPSIFT-----------P----CQHKYGNFVIQQALRVTKG 268
QR +I P + +YGN+VIQ++L V +G
Sbjct: 750 MEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEG 793
>gi|237840953|ref|XP_002369774.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211967438|gb|EEB02634.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|221483718|gb|EEE22030.1| pumilio, putative [Toxoplasma gondii GT1]
Length = 1913
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 34/214 (15%)
Query: 78 FDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS----KEASSVIIKC 133
F L + YGC R +Q+ ++ L + LV R KD + + + + VI KC
Sbjct: 1070 FRLSLEVYGC---RVIQRAVESLPVPAQLRLV-----RELKDHVITCVEDQHGNHVIQKC 1121
Query: 134 LETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLS 193
E L + + A ++ H GC + + + L+D++ + L
Sbjct: 1122 AERLPSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMSQVAALIDVVMAELCMLI 1181
Query: 194 KDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--------YQRPS 245
+D GNYVVQHVL G KI + LS + ++VE+ R
Sbjct: 1182 RDQFGNYVVQHVLEFGRDADKMKIIDFMCEDIIALSTEKYACNVVERALTLNAMGRARRR 1241
Query: 246 IFT----------PCQ----HKYGNFVIQQALRV 265
I T P + +YGN+V+Q+ + V
Sbjct: 1242 IITAALGPEMMGQPLKMVMLDRYGNYVVQRMMEV 1275
>gi|4539306|emb|CAB39609.1| pumilio-like protein [Arabidopsis thaliana]
gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana]
Length = 849
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK +ST ++ + + L YGC R +QK + ++ + L
Sbjct: 570 GNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGC---RVIQKALDVIEPDQRVRLA 626
Query: 110 IS---AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
R +D + + VI KC+E + K + A L+ H GC +
Sbjct: 627 RELDGQVMRCVRD----QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 682
Query: 167 NNFINEMRGPRRGGLL-DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKF 225
+ + + + I LSKD GNYV QHVL G + E+I L G
Sbjct: 683 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 742
Query: 226 EELSLLRCGSHLVEK 240
+LSL + S+++EK
Sbjct: 743 VQLSLHKFASNVIEK 757
>gi|388583020|gb|EIM23323.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 373
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVI---SAAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK I+ + + + LV + R +D + A+ VI + +E +D K
Sbjct: 124 YGC---RVVQKAIECVEEAEQLELVKRVETITERAVQD----QNANHVIQRIIERVDPDK 176
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYV 201
N+ +ELATH GC L + R L++ + + L D GNYV
Sbjct: 177 LGNFPEVFANNAKELATHPYGCRVLQRSFEHIGQARSRELIEQLHESVDNLVVDMFGNYV 236
Query: 202 VQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VQ++L G + +I + +F EL+ + S++ EK
Sbjct: 237 VQYLLEFGTDEDRSRIVVKINQRFFELARHKFASNVCEK 275
>gi|326500532|dbj|BAK06355.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR-RGGLLDL 184
A+ + KC+E + Q +Y + L+TH G V + + + P+ G +
Sbjct: 337 ANHAVQKCMECVQPQYIHFIYRRLCGKAKMLSTHPLGFVVIQKMLEFCKDPQIMGRFITE 396
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
I + LS DP GNYVVQ++L G ++ + I GK +S + S +++K
Sbjct: 397 ILDCVKELSMDPYGNYVVQYILEHGGPRHRQIIVLKFAGKIVHMSHQKHSSKVIQKCLLY 456
Query: 241 --YQRPSIFTP---CQ--------------HKYGNFVIQQALRVTKGFQ 270
YQ I C H+Y +V+QQ + V +Q
Sbjct: 457 GGYQDRKIVITEILCAGGGQTVDHLLGMMVHQYATYVVQQLIEVVNEWQ 505
>gi|296417426|ref|XP_002838359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634287|emb|CAZ82550.1| unnamed protein product [Tuber melanosporum]
Length = 999
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 112/286 (39%), Gaps = 58/286 (20%)
Query: 39 YDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------AR 91
+ +V + GS F+Q+ L +S IF + LMTD +G ++
Sbjct: 619 HHVVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQKFFEHGN 678
Query: 92 SMQK--LIKLLVGSP-CISL------VISAAYRRF---KDMMFSKEASSVIIKCLETLDE 139
+QK L K + G +SL V+ A + KE ++KC++ D+
Sbjct: 679 QLQKSILAKQMEGHVLALSLQMYGCRVVQKALEHILTEQQASLVKELDGSVLKCVK--DQ 736
Query: 140 QKNEVLYLA-----------AMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDL 184
N V+ A + FR LATH GC + + + LL
Sbjct: 737 NGNHVVQKAIERVPAEHIQFIIKAFRGQVHTLATHPYGCRVIQRMLEHCDETAQASLLQE 796
Query: 185 ISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---- 240
+ L +D GNYV QHV+ G + KI SL+ + + S + S++VEK
Sbjct: 797 LHVCTIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFASNVVEKSITF 856
Query: 241 --------------YQRPSIFTPCQ----HKYGNFVIQQALRVTKG 268
R +P Q +YGN+VIQ+ L + +G
Sbjct: 857 GSEEEKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQG 902
>gi|407928197|gb|EKG21067.1| hypothetical protein MPH_01611 [Macrophomina phaseolina MS6]
Length = 943
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 33/235 (14%)
Query: 39 YD-IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HL 89
YD I + GS F+Q+ L +S ++F+ + LMTD +G H
Sbjct: 545 YDYICEFSGDQHGSRFIQQKLETANSDEKERVFKEIQPNAMQLMTDVFGNYVIQKFFEHG 604
Query: 90 ARSMQKLIKLLVGSPCISL--------VISAAYRRF-----KDMMFSKE----------- 125
+S ++++ + ++L V+ A DM+ E
Sbjct: 605 DQSQKRILANKMKGHVLTLSLQMYGCRVVQKALEHVLVDQQADMVKELENNVLRCVKDQN 664
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K +E + Q + + A + H L+ H GC + + P R +L +
Sbjct: 665 GNHVIQKAIERVPAQHIQFIIDAFIGHVSSLSVHGYGCRVIQRMLEHCEEPARRAILSEL 724
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ A L D GNYV QH++ G I ++K + + + S++VEK
Sbjct: 725 HACAPTLIPDQYGNYVTQHIIEHGAPDDRAAIIEIVKTQLLAFAKHKFASNVVEK 779
>gi|195572367|ref|XP_002104167.1| GD20820 [Drosophila simulans]
gi|194200094|gb|EDX13670.1| GD20820 [Drosophila simulans]
Length = 701
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 42/226 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L + +F + + LMTD +G ++ +QK +
Sbjct: 457 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYV---IQKFFEF- 512
Query: 101 VGSP----CISLVISAAYRRFKDMMF---------------------------------S 123
G+P + + + + M+
Sbjct: 513 -GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKD 571
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
+ + V+ KC+E +D + + A L+TH GC + + + +LD
Sbjct: 572 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 631
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ H E L +D GNYV+QHVL G + + + ++GK LS
Sbjct: 632 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLS 677
>gi|145509346|ref|XP_001440614.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407837|emb|CAK73217.1| unnamed protein product [Paramecium tetraurelia]
Length = 648
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLD 138
D+ D G H ++Q L+ L+ +V ++ + + + +I K +
Sbjct: 409 DIACDKKGTH---AIQSLVSLISCKQEEEMVENSIKNNIIPLTLDSQGTHLIKKIIARFS 465
Query: 139 EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG--PRRGGLLDLISSHAEFLSKDP 196
E + ++ M+ F ++ H G L + I + + + +++ + H + + +DP
Sbjct: 466 EDRLNYIFHKLMDRFIQVVNHQFGLCVLKDLITKFKNNLEKSAIIINRMKDHLDEIIQDP 525
Query: 197 SGNYVVQHVLGL-GDLKYSEKICSLLKGKFEELSLLRCGSHLVE--------KYQRPSIF 247
GNY VQHV+ + GDL+ + I +L K +LS+ + S++VE K Q+ I
Sbjct: 526 FGNYGVQHVIDVYGDLRCNCIIDKIL-LKLIQLSIHKYSSNVVEKCILETSPKTQKRFIK 584
Query: 248 TPCQ---------HKYGNFVIQQALRVTKGFQMTERNIIQE 279
Q +K+G FV+Q+AL+ + +++E + +Q+
Sbjct: 585 QLSQDIICLELMKNKFGTFVLQKALQ--EADKLSETDSLQQ 623
>gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|113535069|dbj|BAF07452.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|218189826|gb|EEC72253.1| hypothetical protein OsI_05392 [Oryza sativa Indica Group]
gi|222619956|gb|EEE56088.1| hypothetical protein OsJ_04928 [Oryza sativa Japonica Group]
Length = 894
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK S ++ + + L YGC + + +++ L + ++ +
Sbjct: 609 GNYVVQKFFEHGSSAQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVDLDQQTKMVAEL 668
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 669 DGQVMRCVRD----QNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRV 724
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P+ ++D I L+ D GNYVVQHVL G I L G+ ++
Sbjct: 725 LEHCDDPKTQQIMMDEILQSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQM 784
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 785 SQQKFASNVIEK 796
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + + + L TD YG ++ + + L
Sbjct: 708 VVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLATDQYGNYVVQHV-----L 762
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P S +I + M K AS+VI KCL + + +VL
Sbjct: 763 EHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQVL------------- 809
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
I EM G S H E + KD NYVVQ VL D + E I
Sbjct: 810 -----------IGEMLGSSNE------SEHLEVMMKDQFANYVVQKVLETCDDQQREMIL 852
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H+V + ++
Sbjct: 853 TRIKAHLNTLKKYTYGKHIVARVEK 877
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 57/291 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR------SMQ 94
IV + + GS F+Q+ L +F + + + LMTD +G ++ + SM
Sbjct: 840 IVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMD 899
Query: 95 KLIKL--------------LVGSPCISLVISAAYRRFKDMMF------------SKEASS 128
+ + L + G I + + + M + +
Sbjct: 900 QKLALATRIRGHVLPLALQMYGCRVIQKALESISTDQQSEMVRELDGHVLKCVKDQNGNH 959
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q + A L+TH GC + + + +L+ +
Sbjct: 960 VVQKCIECVTPQSLHFIIEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQS 1019
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------- 241
E L +D GNYV+QHVL G KI ++G+ LS + S++VEK
Sbjct: 1020 TEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNVVEKCVTHSSRT 1079
Query: 242 ---------------QRPSIFTPCQHKYGNFVIQQALRVTKGFQMTERNII 277
+++T + +Y N+V+Q+ + + + Q R II
Sbjct: 1080 ERAFLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ---RKII 1127
>gi|121703716|ref|XP_001270122.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
gi|119398266|gb|EAW08696.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
Length = 908
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H +S
Sbjct: 494 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 553
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A D S KE + ++KC+ D+
Sbjct: 554 QKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVR--DQNG 611
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + R +L +
Sbjct: 612 NHVIQKAIERVPSQYVQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCEEEDRESILAELH 671
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ +++ + S + S++VEK
Sbjct: 672 ACTTHLIPDQFGNYVIQHVIENGEEKDRSRMITIVLSQLLVYSKHKFASNVVEKSIEFGE 731
Query: 241 -YQRPSIFTP---------------CQHKYGNFVIQQALRVTKG 268
QR I + + +YGN+VIQ+ L KG
Sbjct: 732 ESQRRQIISTLTSPNDRGESPLLGLMRDQYGNYVIQKVLGQLKG 775
>gi|448526042|ref|XP_003869269.1| Mpt5 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380353622|emb|CCG23133.1| Mpt5 RNA-binding protein [Candida orthopsilosis]
Length = 972
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 43/253 (16%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGK-------DSTITYKIFEAVYKYPFDLMTDGYG 86
L Q +I+ L K + G FLQK + +T IF+ +Y Y +L+ D +G
Sbjct: 287 LTQLKPEILKLAKDQYGCRFLQKKIDENLISNYQVRATNFEVIFDQIYPYMCELIVDPFG 346
Query: 87 CHL---------------------------------ARSMQKLIKLLVGSPCISLVISAA 113
+L R++QK+I L + ++L+I
Sbjct: 347 NYLVQKMTPYCSEGNLNLILEILQYNLCQISVNQHGTRALQKIIDNLNSTSQLNLLIKGL 406
Query: 114 YRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEM 173
D++ + VI K L D + + +Y + + +ATH GC L +N +
Sbjct: 407 KPYIIDLIRDLNGNHVIQKILNKYDPPECQFIYDSIIEDLYTVATHKHGCCVLQKCLNHV 466
Query: 174 RGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELSL 230
+ I F L D GNYV+Q+++ + + + K+ + L+ L
Sbjct: 467 TPQQLDQFSKAILKFDNFRMLINDQFGNYVLQYLISINSVDVNYKMFQNFLQSGLTNLCN 526
Query: 231 LRCGSHLVEKYQR 243
+ S++VEK+ +
Sbjct: 527 SKFSSNVVEKFMK 539
>gi|118378471|ref|XP_001022411.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila]
gi|89304178|gb|EAS02166.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila SB210]
Length = 977
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL 89
KN + + + + L K + G+ +QK+ K++ + L YGC
Sbjct: 575 KNKIFERIQPEALNLMKDQFGNYVIQKLFEKGTIEHKEKLYYIIKGNVEQLSLHTYGC-- 632
Query: 90 ARSMQKLIKLLVGSPCISL-VISAAYRRFKDMMFSKEASSVIIKCLETLDEQK-----NE 143
R +QK ++ L P + +I + + + + VI KC ETL K NE
Sbjct: 633 -RVIQKALEELKERPQMQEGLIQELNNKIMTCIQDQNGNHVIQKCFETLSSSKLTTIINE 691
Query: 144 VL----------YLAAMNHF----RELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
V+ YL N F ELA H GC + + P + + + ++
Sbjct: 692 VIQNVNLELQNKYLFNKNKFYQKIEELAFHPYGCRVIQRILEFCSNPETKKIYEKLMTNL 751
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L + GNY++Q+++ G ++I ++K F +LSL + S++ EK
Sbjct: 752 IRLCECQYGNYIIQYIIEKGQKLEKDEILQVVKVHFVDLSLNKFASNVTEK 802
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 177 RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSH 236
+ + + I A L KD GNYV+Q + G +++ EK+ ++KG E+LSL G
Sbjct: 574 EKNKIFERIQPEALNLMKDQFGNYVIQKLFEKGTIEHKEKLYYIIKGNVEQLSLHTYGCR 633
Query: 237 LVEKY-----QRPS------------IFTPCQHKYGNFVIQQALRVTKGFQMTERNIIQE 279
+++K +RP I T Q + GN VIQ+ ++T II E
Sbjct: 634 VIQKALEELKERPQMQEGLIQELNNKIMTCIQDQNGNHVIQKCFETLSSSKLT--TIINE 691
Query: 280 LGQS 283
+ Q+
Sbjct: 692 VIQN 695
>gi|326521732|dbj|BAK00442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 824
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++++ I LV + + + + VI KC+E + +
Sbjct: 580 YGC---RVIQKALEVMELDQKIDLVRELDGNIMR-CVRDQNGNHVIQKCIECVPTEHIGF 635
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+ H GC + + G RG ++D I A L++D GNYV Q
Sbjct: 636 VVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACILAQDQYGNYVTQ 695
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HV+ G +I S L G+ +S + S+++EK
Sbjct: 696 HVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 732
>gi|392577052|gb|EIW70182.1| hypothetical protein TREMEDRAFT_29689 [Tremella mesenterica DSM
1558]
Length = 337
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 39/230 (16%)
Query: 48 EGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH----------------LAR 91
+ GS F+Q+ L +I E + + LMTD +G + LA+
Sbjct: 57 QHGSRFIQQKLENATEAERRQILEELEPNVYQLMTDVFGNYVIQKLFEVCDQTEKAGLAK 116
Query: 92 SMQ----KLIKLLVGSPCISLVISAAYRRFKDMMF------------SKEASSVI----- 130
M+ +L + G + + +D++ S A+ VI
Sbjct: 117 KMEGHVLQLSMQMYGCRVVQKALEYVLTEQRDVLVEELRPHTLECVKSSNANHVIHLRLT 176
Query: 131 IKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAE 190
I+ L TLD + + A + H EL TH GC L + R L+D + H
Sbjct: 177 IERLITLD--PPDFVTKAFVGHVLELGTHPYGCRVLQKTFENLPVERTRALIDEMHLHTV 234
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ D GNYVVQ ++ G + K+ L + +E+S + S++VEK
Sbjct: 235 KFTMDQFGNYVVQSIIDKGIPEDRHKVIDKLLPQIQEMSRHKFASNVVEK 284
>gi|145501806|ref|XP_001436883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404028|emb|CAK69486.1| unnamed protein product [Paramecium tetraurelia]
Length = 475
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSP-CISL 108
G+ +QK+L IF+ + Y +L + +GC R +QKLI+++ + I+
Sbjct: 198 GNYLIQKILEKGSLAQQILIFKQLLPYVLELSKNNFGC---RVIQKLIEIISNNDQLINP 254
Query: 109 VISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
I + + ++ + VI+KCLE L + + GC +
Sbjct: 255 FIEEIKKNVQSLLIDQNGKYVILKCLENLQIDAVRFILKPTEEQCNHMCDSQYGCKIIQK 314
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
I E + L+ + S + L K SGNY++Q+ + K E I + + E L
Sbjct: 315 LI-ENYPSQVDDLIQICISTQDLLYKSQSGNYIIQY--AIKQPKNLEVIANYIINHLEYL 371
Query: 229 SLLRCGSHLVE 239
+ S+ VE
Sbjct: 372 CFNKYASNTVE 382
>gi|357148484|ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon]
Length = 983
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 35/234 (14%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 659 IVEYSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVFGNYVIQKFFEHGTPE 718
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK +++L I LV+ + + + +
Sbjct: 719 QRRDLGTKLVGHVLPLSLQMYGCRVVQKALEVLELDQKIELVLELDGNIMR-CVRDQNGN 777
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLIS 186
VI KC+E + + + + L+ H GC + + G +G ++D I
Sbjct: 778 HVIQKCIECVPTEHIGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEIL 837
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
A L++D GNYV QHVL G +I S L G+ +S + S+++EK
Sbjct: 838 QSACVLAQDQYGNYVTQHVLEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 891
>gi|241950345|ref|XP_002417895.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative;
RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223641233|emb|CAX45613.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative [Candida
dubliniensis CD36]
Length = 982
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGY 85
L Q +I+ L K + G FLQK + + Y+ IF +Y Y ++L+ D +
Sbjct: 282 LTQLKSEILKLAKDQYGCRFLQKKID-ESLVPNYQVRLANFEVIFNQIYSYVYELIVDPF 340
Query: 86 GCHL---------------------------------ARSMQKLIKLLVGSPCISLVISA 112
G +L R++QK+I L S + L+I
Sbjct: 341 GNYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIKG 400
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+++ + VI K L + + +Y + ++ +ATH GC L +N
Sbjct: 401 LKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 460
Query: 173 MRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELS 229
+ + G I F L D GNYV+Q+++ + L + +I + + L
Sbjct: 461 VTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISNLC 520
Query: 230 LLRCGSHLVEKY 241
L+ S++VEK+
Sbjct: 521 NLKFSSNVVEKF 532
>gi|83771739|dbj|BAE61869.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 860
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 29/252 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + T + + + L T YGC R +QK ++ ++ S+V
Sbjct: 495 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGC---RVVQKALEHILTDQQASMV 551
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + + VI K +E + + + + A + +LATH GC +
Sbjct: 552 KELEHHVLR-CVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRM 610
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + R +L + L D GNYV+QHV+ G+ K ++ +++ S
Sbjct: 611 LEHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYS 670
Query: 230 LLRCGSHLVEK----------YQRPSIFTPC------------QHKYGNFVIQQALRVTK 267
+ S++VEK +Q S+ T + ++GN+VIQ+ L K
Sbjct: 671 KHKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLK 730
Query: 268 GFQMTERNIIQE 279
G ER+ + E
Sbjct: 731 G---AERDALVE 739
>gi|156064143|ref|XP_001597993.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980]
gi|154690941|gb|EDN90679.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 964
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 111/284 (39%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L +S ++F + LMTD +G +
Sbjct: 564 VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQV 623
Query: 89 ----LARSMQKLIKLLVGSPCISLVISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
LA M+ + L V+ A + KE + ++KC++ D+
Sbjct: 624 QKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKELEADVLKCVK--DQNG 681
Query: 142 NEVLYLAA-----------MNHFRE----LATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A + FR LATH GC + + + + +L+ +
Sbjct: 682 NHVVQKAIERVPTEHIQFIIEAFRGQVHILATHPYGCRVIQRILEYCQPRDQERVLEELH 741
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY----- 241
A L D GNYV QHV+ G + KI ++ + LS + S++VEK
Sbjct: 742 QCASNLITDQYGNYVTQHVIQHGKPEDRAKIIKIVTAQLLTLSKHKFASNVVEKSIQFGT 801
Query: 242 --QRPSIF-----------TPCQ----HKYGNFVIQQALRVTKG 268
QR +I +P Q +YGN+VIQ+ L KG
Sbjct: 802 DEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKG 845
>gi|46124665|ref|XP_386886.1| hypothetical protein FG06710.1 [Gibberella zeae PH-1]
Length = 761
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL 89
K A+ + D++ L K G+ QK++ + +AV + L + YGC
Sbjct: 394 KQAMFNEIGSDMINLMKDLYGNYVCQKLIENGSMAQKMHVIQAVKGHIVQLSLNVYGC-- 451
Query: 90 ARSMQKLIKLLVGSPCISLVIS-AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLA 148
R QK++ S + ++ +Y K + + + VI K ++T+ + + + +A
Sbjct: 452 -RVFQKIVDCCPPSHIVGILDEIHSYDVIKSLSQDECGNHVIQKLVQTMPPKDVKFITVA 510
Query: 149 AMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGL 208
H REL+ + C L + R L++ + + L D GNYV H++
Sbjct: 511 CQEHARELSANSFSCRILQRVLEYAEEDDRKKLVESLILMMDKLVTDQWGNYVAGHIIEH 570
Query: 209 GDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ ++ + + EL + GSH+VEK
Sbjct: 571 RGPEDRDRFFEHVMSRLFELCHHKLGSHVVEK 602
>gi|50293245|ref|XP_449034.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528347|emb|CAG62004.1| unnamed protein product [Candida glabrata]
Length = 897
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + EA+Y F + + YG RS+QK+I + I+L+
Sbjct: 283 GNYLIQKLCDFLTPDQRTALIEAIYPNVFQISINQYG---TRSLQKIIDTVDDEQQINLI 339
Query: 110 IS------AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM--NHFRELATHVR 161
+ + R+ ++ + VI KC+ K + + A + N+ ++TH
Sbjct: 340 VKGFSNEYTSIRQVVTLINDLNGNHVIQKCIFKFPASKFDFIIAAIIDQNNIIAISTHKH 399
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS--EKICS 219
GC L ++ + + I L D GNY++Q +L + +L + + +
Sbjct: 400 GCCVLQKLLSVCTLQQTFKISVKIVQFLPNLINDQFGNYIIQFLLDIEELDFYMLAEFYN 459
Query: 220 LLKGKFEELSLLRCGSHLVEKYQR 243
L G+ +LS L+ S++VEK+ +
Sbjct: 460 RLSGEICQLSCLKFSSNVVEKFMK 483
>gi|342179893|emb|CCC89367.1| putative pumillio RNA binding protein [Trypanosoma congolense
IL3000]
Length = 571
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQ-----K 95
+ L EG SL + M S +D+ + + + + + D +GCH+ R + +
Sbjct: 219 VELACSAEGRSLLISAM-SSQDAVVMDMMVQEIAVDVERVALDQHGCHVLRMLHGYASAE 277
Query: 96 LIKLLVGSPCISLVI-----SAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM 150
LV S +LV+ S RR +F + +D Q ++ + A
Sbjct: 278 HTATLVSSFTETLVLNLCTMSQHSRRILQTLFERP----------LIDLQP--IINVLA- 324
Query: 151 NHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD 210
H R LA +GC+SL ++ L+ + ++ DP GNYVVQ V+
Sbjct: 325 KHSRYLAATQQGCISLMRVFELCDSCQKKQLISRLLPLFSHIALDPFGNYVVQCVIENIG 384
Query: 211 LKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR-----PSI---------FTP------C 250
SE + S +G+ ++S + GS+ VEK + P++ +TP
Sbjct: 385 QDASEYVTSYFRGELLKMSCDKYGSNTVEKIVKVCGDVPAVWRLLMDELFYTPGVLQKLI 444
Query: 251 QHKYGNFVIQ 260
Q YGNFV+Q
Sbjct: 445 QDNYGNFVVQ 454
>gi|317148910|ref|XP_001823002.2| mRNA binding protein Pumilio 2 [Aspergillus oryzae RIB40]
Length = 880
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 29/252 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + T + + + L T YGC R +QK ++ ++ S+V
Sbjct: 515 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGC---RVVQKALEHILTDQQASMV 571
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + + VI K +E + + + + A + +LATH GC +
Sbjct: 572 KELEHHVLR-CVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRM 630
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + R +L + L D GNYV+QHV+ G+ K ++ +++ S
Sbjct: 631 LEHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYS 690
Query: 230 LLRCGSHLVEK----------YQRPSIFTPC------------QHKYGNFVIQQALRVTK 267
+ S++VEK +Q S+ T + ++GN+VIQ+ L K
Sbjct: 691 KHKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLK 750
Query: 268 GFQMTERNIIQE 279
G ER+ + E
Sbjct: 751 G---AERDALVE 759
>gi|224004040|ref|XP_002295671.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585703|gb|ACI64388.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 294
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 106/286 (37%), Gaps = 67/286 (23%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD----------------- 83
I + K + GS F+QK L D++ F V DL+ D
Sbjct: 5 IATVAKDQEGSRFIQKRLELADASELESAFAEVLPALRDLVNDVYGNFAVQGLLEFGTDA 64
Query: 84 -------------------GYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
YGC R +QK I+ L + SLV S+ + +F
Sbjct: 65 MKKEVGENLAVDIVSLSSKAYGC---RIVQKAIETLDKNDVASLV-SSFKGQVLSCIFDL 120
Query: 125 EASSVIIKCLETLD-----EQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRG 179
A+ VI K L ++ Q +V+ +N EL H GC + + P +
Sbjct: 121 NANHVIQKFLTVINLALSLTQSLDVIVDEVINDCEELCKHAYGCRVVQRLVEHGLDPIQS 180
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
+LD + + E L D GNYV+ ++ G + E I + G + S + S++VE
Sbjct: 181 RVLDNVIACHESLIDDKFGNYVIGRLIACGRKEDREAIVKTMSGNVLKFSKNKQASNVVE 240
Query: 240 KY-------QRPSIF---------------TPCQHKYGNFVIQQAL 263
QR I + + +Y N+V+++A+
Sbjct: 241 AMLQHGDVAQRKKILQEMLNVSVRTVSAVVSMAEDQYANYVLKKAM 286
>gi|297795139|ref|XP_002865454.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311289|gb|EFH41713.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 72/278 (25%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPC------- 105
L+ + G TI IF+ + + +LM D YG + ++ LL+G C
Sbjct: 204 LLETIYQGTKETID-TIFDRIIVHICELMVDPYG-------KDVVMLLIGKCCSEQIIQI 255
Query: 106 ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNE---------------------- 143
+ LV ++ F ++ F ++ I + L+++ ++ N+
Sbjct: 256 VDLVTQDMFQ-FVNICFDLRGTAAIQELLDSIHKRANDQIPRIMDLINSVGLQLAKSSNA 314
Query: 144 ------VLYLAAMNHFR-----------ELATHVRGCVSLNNFINEMRGPR---RGGLLD 183
L ++H R E++ GC +++ R P R L+
Sbjct: 315 RFLILSCFRLFPLSHCRYLLEVVAQHCYEISIDQNGCCLYQQCLDKNRVPNPEIRQRLIS 374
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ SHA L + GNYVVQ+++ L + + L G + L+ + GSH+V+K R
Sbjct: 375 EVISHALRLCLNCYGNYVVQYIVELNNQHVINALVRQLIGNYAHLARNKYGSHVVQKLLR 434
Query: 244 --------------PSIFTPCQHKYGNFVIQQALRVTK 267
I T +GN+VIQ A V+K
Sbjct: 435 LRGVDTRLIVVDLLSQIDTLLLDPFGNYVIQTAWFVSK 472
>gi|70984262|ref|XP_747647.1| mRNA binding protein Pumilio 2 [Aspergillus fumigatus Af293]
gi|66845274|gb|EAL85609.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
Af293]
gi|159122433|gb|EDP47554.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
A1163]
Length = 908
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H +S
Sbjct: 496 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 555
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A D S KE + ++KC+ D+
Sbjct: 556 QKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVR--DQNG 613
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + R +L +
Sbjct: 614 NHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDRESILAELH 673
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ +++ + S + S++VEK
Sbjct: 674 ACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNVVEKSIEFGE 733
Query: 241 -YQRPSIFTP---------------CQHKYGNFVIQQALRVTKG 268
QR I + + +YGN+VIQ+ L KG
Sbjct: 734 ESQRQQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKG 777
>gi|340508865|gb|EGR34480.1| pumilio-family RNA binding repeat protein [Ichthyophthirius
multifiliis]
Length = 316
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 31/267 (11%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL 89
KNA+ + ++ L K + G+ +QK+ ++F+ + + DL YGC
Sbjct: 61 KNAIFKKIYHETFELMKDQFGNYVIQKLFEKGLPEHKKQLFQVLIENTQDLCLHTYGC-- 118
Query: 90 ARSMQKLIKLLVGSPCI-SLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQK------- 141
R +QK I+ L P + +I D + + + VI K E +D K
Sbjct: 119 -RVIQKAIEELQEFPLLQEQIIDELSNNIMDYIQDQHGNHVIQKLFECVDCSKLQVIIDD 177
Query: 142 --NEVLYLAA----------MNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
V+YL + + LA H GC + + + + + + +
Sbjct: 178 IIQNVIYLYQVLIYFIFNFMIKKIQTLAFHPYGCRVIQRILEFCQPQQTKQIYQKLKENL 237
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP 249
L K GNY++Q+++ G + + + ++K F LSL + S++ EK +++
Sbjct: 238 ILLCKCQYGNYIIQYIIENGLEEDKQYLLQVVKKNFVSLSLNKFASNVTEK---SILYSN 294
Query: 250 CQHKYGNFVIQQALRVTKGFQMTERNI 276
+ KYG V++ LR+ Q E+NI
Sbjct: 295 DEFKYG--VLENLLRLN---QNNEQNI 316
>gi|161138172|gb|ABX58018.1| pumilio-like protein 2 [Mesocestoides corti]
Length = 150
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + + + + L++H GC + + + +LD +
Sbjct: 3 VIQKCIECVPSAELDFIITTFRXQVFALSSHPYGCRVIQRILEHCSAEQTRRILDELHKG 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L KD GNYVVQHVL G + +I + L+G+ LS + S+++EK
Sbjct: 63 VDNLVKDQYGNYVVQHVLEHGSQEDKSRIINSLRGRVAGLSAHKFASNVMEK 114
>gi|348675055|gb|EGZ14873.1| hypothetical protein PHYSODRAFT_545979 [Phytophthora sojae]
Length = 906
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI + L+ + + N+ ++ A + TH GC L ++ ++ +++ +
Sbjct: 613 VIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQ 672
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLK--GKFEELSLLRCGSHLVEK------ 240
A L +DP GNYVVQ+V L E ++K G ELS+ + S+++EK
Sbjct: 673 AMKLMQDPYGNYVVQYV--LDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAP 730
Query: 241 ---YQR--------PSIFTPCQHKYGNFVIQQALRV 265
Q+ P + Q ++ N+V+Q+AL V
Sbjct: 731 ERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCV 766
>gi|391872405|gb|EIT81532.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 906
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 29/252 (11%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + T + + + L T YGC R +QK ++ ++ S+V
Sbjct: 541 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGC---RVVQKALEHILTDQQASMV 597
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + + VI K +E + + + + A + +LATH GC +
Sbjct: 598 KELEHHVLR-CVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRM 656
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
+ + R +L + L D GNYV+QHV+ G+ K ++ +++ S
Sbjct: 657 LEHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYS 716
Query: 230 LLRCGSHLVEK----------YQRPSIFTPC------------QHKYGNFVIQQALRVTK 267
+ S++VEK +Q S+ T + ++GN+VIQ+ L K
Sbjct: 717 KHKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLK 776
Query: 268 GFQMTERNIIQE 279
G ER+ + E
Sbjct: 777 G---AERDALVE 785
>gi|323508147|emb|CBQ68018.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Sporisorium reilianum SRZ2]
Length = 1077
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L +F+ V + LMTD +G +
Sbjct: 713 VVEFSSDQHGSRFIQEKLDTATDEEKKTLFDEVLPHARQLMTDVFGNYVIQKMLEHGDDE 772
Query: 89 ----LARSM-QKLIKLLVGSPCISLV------ISAAYRR---------FKDMMFSKEASS 128
LAR M ++ L +G+ +V ISA R + + A+
Sbjct: 773 QRDILAREMVGHVLPLSLGTYGCRVVQKAFDHISAPQREKLATELDGHIMQCVRDQNANH 832
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ K +E +D + + A + H LA+H C L + LLD + +
Sbjct: 833 VVQKVIERVDADRIAFIPQAFVGHVPALASHCYSCRVLQRTFEHCTEAQTRPLLDELHAE 892
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
A L + GNYV+Q VL G + ++ + +KG LS + S+++E+ R S
Sbjct: 893 AVALMQHQYGNYVMQWVLQRGKERDRAQVIAKIKGSVLVLSRHKFASNVIEEVVRTS 949
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query: 118 KDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR 177
+ +M + VI K LE D+++ ++L + H L+ GC + + + P+
Sbjct: 750 RQLMTDVFGNYVIQKMLEHGDDEQRDILAREMVGHVLPLSLGTYGCRVVQKAFDHISAPQ 809
Query: 178 RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS-------- 229
R L + H +D + N+VVQ V+ D I G L+
Sbjct: 810 REKLATELDGHIMQCVRDQNANHVVQKVIERVDADRIAFIPQAFVGHVPALASHCYSCRV 869
Query: 230 LLRCGSHLVEKYQRPSI-------FTPCQHKYGNFVIQQALRVTKGFQMTERNIIQELGQ 282
L R H E RP + QH+YGN+V+Q L+ +G + +I ++
Sbjct: 870 LQRTFEHCTEAQTRPLLDELHAEAVALMQHQYGNYVMQWVLQ--RGKERDRAQVIAKIKG 927
Query: 283 SSFI 286
S +
Sbjct: 928 SVLV 931
>gi|223994913|ref|XP_002287140.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976256|gb|EED94583.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 300
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 25/212 (11%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDE 139
L+ H RS+QK+++ ++ A + + I + L L
Sbjct: 82 LVNASLNLHGTRSVQKIVESKKQDTAAKILTDALEPSAARLCIDSHGNHAIQRILLKLPY 141
Query: 140 QKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGN 199
Q + ++ A ++A H GC + ++ R L+ I + L +D GN
Sbjct: 142 QYTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSVARSHLVTRIVEKSLELMQDAYGN 201
Query: 200 YVVQHVLGL-GDLKYSE-------KICSLLKGKFE----ELSLLRCGSHLVEKY------ 241
YVVQ+VL + GD + ++C L KF E L RC + E+Y
Sbjct: 202 YVVQYVLDVCGDDEVHAICESVIGRVCLLAIQKFSSNVMEKCLERCTDRVREEYLNELND 261
Query: 242 ---QRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
R + P +GN+V+Q+AL V+ Q
Sbjct: 262 SDRLRELMMDP----FGNYVVQRALSVSTHAQ 289
>gi|255714993|ref|XP_002553778.1| KLTH0E06864p [Lachancea thermotolerans]
gi|238935160|emb|CAR23341.1| KLTH0E06864p [Lachancea thermotolerans CBS 6340]
Length = 732
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + ++ E++Y + F + + YG RS+QK+I + + L+
Sbjct: 220 GNYLIQKLCEYLTTDQKTQLVESIYPHVFQISINQYG---TRSLQKVIDTVDTDAQVDLI 276
Query: 110 ISAAYRRFKD------MMFSKEASSVIIKCLETLDEQKNEVLYLAAM--NHFRELATHVR 161
IS + F ++ + V+ KC+ K + A + N+ +++TH
Sbjct: 277 ISGFGQNFTSIEQVVVLINDLNGNHVVQKCIFKFPPSKFGFIIDAIVDNNNIVKISTHKH 336
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS--EKICS 219
GC L ++ + + I L D GNY++Q +L + +L + +I
Sbjct: 337 GCCVLQKLLSVCTLQQIFKISVKIVQFLRSLINDQFGNYIIQFLLDIKELDFYLLGEIYD 396
Query: 220 LLKGKFEELSLLRCGSHLVEKY 241
L G+ +LS L+ S++VEK+
Sbjct: 397 KLSGELCQLSCLKFSSNVVEKF 418
>gi|449019193|dbj|BAM82595.1| similar to translational repressor pumilio [Cyanidioschyzon merolae
strain 10D]
Length = 1506
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R++QK +++L S LVI K + + + VI KC+E + Q +
Sbjct: 1111 YGC---RAVQKALEVLPASTQAELVIELDGHVLK-CIRDQNGNHVIQKCIERVPGQHVQF 1166
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ A LA H GC + + ++ ++ I L +D GNYV+QH
Sbjct: 1167 IVDAVRGQAVSLAEHSYGCRVIQRILEYSPEEQKVPIMREIMQACRTLIRDQYGNYVIQH 1226
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
V+ G + I +++ + +S + S++VE+
Sbjct: 1227 VVEHGKEEERAHILRMVRDQCISMSQHKYASNVVER 1262
>gi|346971293|gb|EGY14745.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 825
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 115/287 (40%), Gaps = 64/287 (22%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V + GS F+Q+ L +S +IF + LM D +G ++ +QK +
Sbjct: 429 VVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYV---IQKFFEH- 484
Query: 101 VGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLE-TLDEQKNEVL------------- 145
G+ V++A + + D+ A V+ K LE L EQ+ E++
Sbjct: 485 -GNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVKD 543
Query: 146 -----------------YLA-AMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLD 183
Y+ M+ FR +LA H GC + + + +L
Sbjct: 544 QNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILT 603
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + A+ L D GNYV QHV+ G + K+ L+ + LS + S++VEK
Sbjct: 604 ELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIE 663
Query: 241 ----YQRPSI-----------FTPCQ----HKYGNFVIQQALRVTKG 268
+R SI +P Q +YGN+VIQ+ L G
Sbjct: 664 HGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDG 710
>gi|344234446|gb|EGV66316.1| hypothetical protein CANTEDRAFT_118702 [Candida tenuis ATCC 10573]
Length = 453
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 43/251 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGK---DSTITYK----IFEAVYKYPFDLMTDGYG 86
L+Q DI+ L K + G FLQK + + +I Y IF +Y ++L+ D +G
Sbjct: 87 LSQLKSDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFG 146
Query: 87 CHL---------------------------------ARSMQKLIKLLVGSPCISLVISAA 113
+L R++QK+I+ L + L+ S
Sbjct: 147 NYLIQKLIKYASNENLNLMLDILQSNLFQISINQHGTRALQKIIESLNSPYQLDLLTSGL 206
Query: 114 YRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEM 173
+++ + VI K L + + +Y + +N +ATH GC L +N +
Sbjct: 207 KPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCLNHV 266
Query: 174 RGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICS-LLKGKFEELSL 230
+ ++ I + L D GNYV+Q+++ + D + K S L++
Sbjct: 267 TYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNLVRFDMIHYCN 326
Query: 231 LRCGSHLVEKY 241
L+ S+++EK+
Sbjct: 327 LKFSSNVIEKF 337
>gi|134082176|emb|CAK42288.1| unnamed protein product [Aspergillus niger]
Length = 950
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 58/279 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H ++
Sbjct: 535 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 594
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + +SL V+ A D S KE + +++C+ D+
Sbjct: 595 QKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELENHVLRCVR--DQNG 652
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LATH GC + + R +L +
Sbjct: 653 NHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRESILGELH 712
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ ++ + S + S++VEK
Sbjct: 713 ACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 772
Query: 241 -YQR---------------PSIFTPCQHKYGNFVIQQAL 263
QR S+ + + +YGN+VIQ+ L
Sbjct: 773 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKIL 811
>gi|356530316|ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 985
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I+L + + + R +D + + VI KC+E++ +K
Sbjct: 742 YGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRD----QNGNHVIQKCIESIPTKKISF 797
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+ H GC + + + ++D I L++D GNYV Q
Sbjct: 798 ILSAFRGQVATLSMHPYGCRVMQRVLEHCTDESQCQFIVDEILESVCALAQDQYGNYVTQ 857
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G + +I + L G +LS + S++VEK
Sbjct: 858 HVLERGKPQERSQIINKLSGHIVQLSQHKFASNVVEK 894
>gi|119173521|ref|XP_001239193.1| hypothetical protein CIMG_10215 [Coccidioides immitis RS]
Length = 829
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
IV + GS F+Q+ L +S ++F+ + LM D +G +
Sbjct: 441 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 500
Query: 89 ----LARSMQKLIKLLVGSPCISLVISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
LA+ M I L V+ A + KE + +IKC++ D+
Sbjct: 501 QKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELENQVIKCVK--DQNG 558
Query: 142 NEVLYLAA-----------MNHF----RELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F + A H GC + + R +L +
Sbjct: 559 NHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEADRDAILGELH 618
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQR 243
+ L D GNYV+QHV+ G + ++ +++ + S + S++VEK + R
Sbjct: 619 LCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNVVEKTLEFGR 678
Query: 244 PS-------IFTPCQHK------------YGNFVIQQALRVTKG 268
P+ IFT + +GN+VIQ+ L+V KG
Sbjct: 679 PNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLKG 722
>gi|357135024|ref|XP_003569112.1| PREDICTED: pumilio homolog 1-like, partial [Brachypodium
distachyon]
Length = 639
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK +T ++ + + L YGC + + +++ L + ++ +
Sbjct: 353 GNYVVQKFFEHGSTTQIKELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVAEL 412
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 413 DGHIMRCVRD----QNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRV 468
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 469 LEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQM 528
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 529 SQQKFASNVIEK 540
>gi|448099238|ref|XP_004199094.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359380516|emb|CCE82757.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 44/258 (17%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------ARSMQ 94
V K + GS F+Q+ L IF + F+LMTD +G ++ +Q
Sbjct: 473 VEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQ 532
Query: 95 KLIKL-------------LVGSPCISLVISAA--------YRRFKDMMF----SKEASSV 129
K + L + G + + A KD + + + V
Sbjct: 533 KEVLLDCMKGHIYTLSMQMYGCRVVQRALEAIKVHQQILIIEELKDHILVCAKDQNGNHV 592
Query: 130 IIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHA 189
I K +E + ++ + + A N L+TH GC + + + +L+ ++
Sbjct: 593 IQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEFSSPDDQRKILNELNRFI 652
Query: 190 EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP 249
+L +D GNYV+QH+L G + E+I ++ G S + S+++EK
Sbjct: 653 FYLIQDQYGNYVMQHILERGSYEDREEILKVVLGSVVNFSKHKFASNVIEK--------- 703
Query: 250 CQHKYGNFVIQQALRVTK 267
C KYG+F +Q R+ K
Sbjct: 704 CI-KYGDF--EQRKRILK 718
>gi|328849409|gb|EGF98590.1| hypothetical protein MELLADRAFT_40771 [Melampsora larici-populina
98AG31]
Length = 370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 4/187 (2%)
Query: 54 LQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAA 113
+QK + ++ E++ + L YGC + + + + + I +
Sbjct: 106 VQKFFEQGNQAQKTQLAESLRGHVLQLSLQMYGCRVIQKALEFVLVDQQHAIIKELEGEV 165
Query: 114 YRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEM 173
+ KD + A+ V+ + LE +D + N + A + LATH GC L M
Sbjct: 166 IQCAKD----QNANHVLQRSLERIDPKMNRFISQAFVGQAFALATHPYGCRVLQRVFEHM 221
Query: 174 RGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRC 233
+ GLL+ + + L D GNYV Q ++ G + + + + +KG+ +S +
Sbjct: 222 PEDQTRGLLEELHRFSNNLMTDQYGNYVAQWIITDGKKEDAAAMMAKVKGQVLLMSKHKF 281
Query: 234 GSHLVEK 240
S++VEK
Sbjct: 282 ASNVVEK 288
>gi|342184736|emb|CCC94218.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 830
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 37/233 (15%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL------------ 89
V + + GS F+Q+ + S +F +++ P +L+ D +G ++
Sbjct: 419 VEFAQDQEGSRFIQRAVESATSDEVDALFREIFESPLELVVDIFGNYVLQKLLEIGNARQ 478
Query: 90 ---------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
R +QK I+++ + ++++ + + +
Sbjct: 479 LAYAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPE-GLDIILAELKGNVAKCIQDQNGNH 537
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + ++ ++ + + ELATH GC + ++ +L+
Sbjct: 538 VVQKCVEVIPQRCGFIVSVFS-GRVMELATHAYGCRVIQCIMDHCPDQEEAIFSELLQCV 596
Query: 189 AEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L+ D GNYV+QHVL + D +I LKG F E S + S+++EK
Sbjct: 597 GT-LATDQYGNYVIQHVLQRVRDDDKVGRIFDALKGNFYEFSKQKFASNVMEK 648
>gi|367049768|ref|XP_003655263.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
gi|347002527|gb|AEO68927.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
Length = 916
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 69/298 (23%), Positives = 113/298 (37%), Gaps = 63/298 (21%)
Query: 24 GPGTYGKNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD 83
GP + K+ L +V + GS F+Q+ L + ++F + LM D
Sbjct: 499 GPKSSVKHWGLKDIAGHVVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKD 558
Query: 84 GYGCHLARSMQKLIKLLVGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLET-LDEQK 141
+G ++ +QK + G V+ A + + D+ A V+ K LE L EQ+
Sbjct: 559 LFGNYV---IQKFFEH--GDQIQKKVLLRAMKGKVMDLSMQMYACRVVQKALENVLVEQQ 613
Query: 142 NE--------VLYLAAMNH-----------------------FR----ELATHVRGCVSL 166
E V+ +A H F+ ELA+ C +
Sbjct: 614 AELVKELEADVVKVATDPHGNHVVQQAIALVPRQHIGFIIGAFKGRVCELASQQYACRVI 673
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
+ + + + AE L K P GNYV+QHVL G + KI ++
Sbjct: 674 QRILEHGTEADKAAVTQELHKSAETLIKHPYGNYVIQHVLHHGRAEDRSKIIDVVMADLV 733
Query: 227 ELSLLRCGSHLVEK--------YQRP-------------SIFTPCQHKYGNFVIQQAL 263
LS +C S++VEK QR +F + +YGN+V+Q+ +
Sbjct: 734 ALSKSKCASNVVEKCIAFGTREEQRAIWDRLVADGEDNCPLFQLAKDQYGNYVVQKLI 791
>gi|67475695|ref|XP_653533.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470496|gb|EAL48147.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704716|gb|EMD44904.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 484
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 114/295 (38%), Gaps = 57/295 (19%)
Query: 39 YDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL--------- 89
+ + L K + GS +Q+ L ++FE + K F+LMTD +G ++
Sbjct: 166 HTVADLCKDQQGSRRIQQFLDTAQPNEIEELFEFIIKDSFELMTDLFGNYVIQKLIEYGT 225
Query: 90 ------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKE 125
R +QK + + G + ++ + + +
Sbjct: 226 IEHKHQFMEIIKGHVVELSLHTYGCRVIQKACEFISGEE-LGIIAEEIKGHIVEFVEDQN 284
Query: 126 ASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
+ VI K +E + + ++ + + H GC + I + + +
Sbjct: 285 GNHVIQKFIEFMPSTYSSLIANEISGYIISFSKHAYGCRVVQKLIERKEPLIQNVITSEL 344
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----- 240
++ L+ + GNYV+QH+L G+ + + S +KGKF E S+ + S++VEK
Sbjct: 345 KNNIWDLAVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCEYSMKKYSSNVVEKCVHCC 404
Query: 241 --YQRPSIFTP-CQHK------------YGNFVIQQALRVTKGFQMT---ERNII 277
QR + C K Y N+VIQ + V Q + E+NI+
Sbjct: 405 TSAQRDNFIDEICSKKDNEMLLKLMKDPYANYVIQTLVEVMDDDQRSKFIEQNIL 459
>gi|452821137|gb|EME28171.1| RNA-binding protein [Galdieria sulphuraria]
Length = 996
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 37 PDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKL 96
PD D +++ G+ +QK+L D I + + + + L YGC R +QK
Sbjct: 713 PDIDRLVIDVF--GNYVVQKLLEHGDENIRQLLTKKLEGHMLSLSLHMYGC---RVVQKA 767
Query: 97 IKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFREL 156
+++L G+ LV + + + + VI KC+E ++ + + + L
Sbjct: 768 LEVLKGNERTQLVQELDGHVLQ-CIRDQNGNHVIQKCIELVEPENIVFIVDSVKGQAVAL 826
Query: 157 ATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK 216
A H GC + + + +L I A L +D GNYV+QH++ GD
Sbjct: 827 AEHAYGCRVVQRVLEHCPKEHKAEILAEIMGCARDLIRDQYGNYVIQHIVEKGDADNKAV 886
Query: 217 ICSLLKGKFEELSLLRCGSHLVEK 240
I ++ + + + S++VE+
Sbjct: 887 IMKVVLNEVVAFAQHKFASNVVER 910
>gi|449496651|ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV--- 109
F + L+ + + K+F V + YGC R +QK I+++ I +V
Sbjct: 761 FFEHGLAAQRRELANKLFGHVLTLSLQM----YGC---RVIQKAIEVVDLDQKIKMVGEL 813
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + L+TH GC +
Sbjct: 814 DGHVMRCVRD----QNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRV 869
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + + +++ I L++D GNYVVQHVL G I L G+ ++
Sbjct: 870 LEHCKDETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQM 929
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 930 SQQKFASNVVEK 941
>gi|449450756|ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 53 FLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV--- 109
F + L+ + + K+F V + YGC R +QK I+++ I +V
Sbjct: 761 FFEHGLAAQRRELANKLFGHVLTLSLQM----YGC---RVIQKAIEVVDLDQKIKMVGEL 813
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + E + + L+TH GC +
Sbjct: 814 DGHVMRCVRD----QNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRV 869
Query: 170 INEMRGPR-RGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + + +++ I L++D GNYVVQHVL G I L G+ ++
Sbjct: 870 LEHCKDETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQM 929
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 930 SQQKFASNVVEK 941
>gi|392869402|gb|EJB11747.1| mRNA binding protein Pumilio 2 [Coccidioides immitis RS]
Length = 886
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F+ + LM D +G H ++
Sbjct: 498 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 557
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
+K + + ++L V+ A + KE + +IKC++ D+
Sbjct: 558 QKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELENQVIKCVK--DQNG 615
Query: 142 NEVLYLAA-----------MNHF----RELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F + A H GC + + R +L +
Sbjct: 616 NHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEADRDAILGELH 675
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQR 243
+ L D GNYV+QHV+ G + ++ +++ + S + S++VEK + R
Sbjct: 676 LCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNVVEKTLEFGR 735
Query: 244 PS-------IFTPCQHK------------YGNFVIQQALRVTKG 268
P+ IFT + +GN+VIQ+ L+V KG
Sbjct: 736 PNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLKG 779
>gi|350636136|gb|EHA24496.1| translation repression protein [Aspergillus niger ATCC 1015]
Length = 894
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 58/279 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H ++
Sbjct: 479 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 538
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + +SL V+ A D S KE + +++C+ D+
Sbjct: 539 QKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELENHVLRCVR--DQNG 596
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LATH GC + + R +L +
Sbjct: 597 NHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRESILGELH 656
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ ++ + S + S++VEK
Sbjct: 657 ACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 716
Query: 241 -YQR---------------PSIFTPCQHKYGNFVIQQAL 263
QR S+ + + +YGN+VIQ+ L
Sbjct: 717 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKIL 755
>gi|302410901|ref|XP_003003284.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261358308|gb|EEY20736.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 852
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 115/287 (40%), Gaps = 64/287 (22%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V + GS F+Q+ L +S +IF + LM D +G ++ +QK +
Sbjct: 456 VVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYV---IQKFFEH- 511
Query: 101 VGSPCISLVISAAYR-RFKDMMFSKEASSVIIKCLE-TLDEQKNEVL------------- 145
G+ V++A + + D+ A V+ K LE L EQ+ E++
Sbjct: 512 -GNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVKD 570
Query: 146 -----------------YLA-AMNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLD 183
Y+ M+ FR +LA H GC + + + +L
Sbjct: 571 QNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILT 630
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--- 240
+ + A+ L D GNYV QHV+ G + K+ L+ + LS + S++VEK
Sbjct: 631 ELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIE 690
Query: 241 ----YQRPSI-----------FTPCQ----HKYGNFVIQQALRVTKG 268
+R SI +P Q +YGN+VIQ+ L G
Sbjct: 691 HGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDG 737
>gi|317035324|ref|XP_001396658.2| mRNA binding protein Pumilio 2 [Aspergillus niger CBS 513.88]
Length = 912
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 58/279 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H ++
Sbjct: 497 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 556
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + +SL V+ A D S KE + +++C+ D+
Sbjct: 557 QKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELENHVLRCVR--DQNG 614
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LATH GC + + R +L +
Sbjct: 615 NHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRESILGELH 674
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ ++ + S + S++VEK
Sbjct: 675 ACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 734
Query: 241 -YQR---------------PSIFTPCQHKYGNFVIQQAL 263
QR S+ + + +YGN+VIQ+ L
Sbjct: 735 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKIL 773
>gi|312374345|gb|EFR21918.1| hypothetical protein AND_16037 [Anopheles darlingi]
Length = 1034
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 42/206 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV + + GS F+Q+ L +F + ++LMTD +G ++ +QK +
Sbjct: 626 IVEFSQDQHGSRFIQQKLERATGPEKQLVFNEILGAAYNLMTDVFGNYV---IQKFFEF- 681
Query: 101 VGSP---------CISLVISAAYRRFKDMMFSKEASS----------------------- 128
GSP V+ A + + + K S
Sbjct: 682 -GSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKD 740
Query: 129 -----VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
V+ KC+E +D + + A N L+TH GC + + + +L
Sbjct: 741 QNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPILA 800
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLG 209
+ ++ E L +D GNYV+QHVLG G
Sbjct: 801 ELHANTEQLIQDQYGNYVIQHVLGTG 826
>gi|119467660|ref|XP_001257636.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
gi|119405788|gb|EAW15739.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
Length = 908
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H +S
Sbjct: 496 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 555
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + ++L V+ A D S KE + ++KC+ D+
Sbjct: 556 QKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVR--DQNG 613
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LA H GC + + R +L +
Sbjct: 614 NHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDRESILAELH 673
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ +++ + S + S++VEK
Sbjct: 674 ACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNVVEKSIEFGE 733
Query: 241 -YQRPSIFTP---------------CQHKYGNFVIQQALRVTKG 268
QR I + + +YGN+VIQ+ L KG
Sbjct: 734 ESQRRQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKG 777
>gi|358369705|dbj|GAA86319.1| mRNA binding protein Pumilio 2 [Aspergillus kawachii IFO 4308]
Length = 932
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 111/279 (39%), Gaps = 58/279 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGC--------HLARS 92
IV + GS F+Q+ L +S ++F + LMTD +G H ++
Sbjct: 517 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQT 576
Query: 93 MQKLIKLLVGSPCISL--------VISAAYRR-FKDMMFS--KEASSVIIKCLETLDEQK 141
+K++ + +SL V+ A D S KE S +++C+ D+
Sbjct: 577 QKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELESHVLRCVR--DQNG 634
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ LATH GC + + R +L +
Sbjct: 635 NHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRMLEHCEEVDRESILGELH 694
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
+ L D GNYV+QHV+ G+ K ++ ++ + S + S++VEK
Sbjct: 695 ACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 754
Query: 241 -YQRPSIFTP---------------CQHKYGNFVIQQAL 263
QR + + + +YGN+VIQ+ L
Sbjct: 755 ESQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKIL 793
>gi|14719326|gb|AAK73144.1|AC079022_17 putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa]
Length = 851
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK T ++ + + L YGC + + +++ L + ++ +
Sbjct: 564 GNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAEL 623
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 624 DGHVMRCVRD----QNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRV 679
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 680 LEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQM 739
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 740 SQQKFASNVIEK 751
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + + + L D YG ++ + + L
Sbjct: 663 VVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHV-----L 717
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P S +I + M K AS+VI KCL + + ++L
Sbjct: 718 EHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQIL------------- 764
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
I+EM G S H E + KD NYVVQ VL D + E I
Sbjct: 765 -----------ISEMLGSTNE------SEHLEVMMKDQFANYVVQKVLETCDDQQREAIL 807
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H+V + ++
Sbjct: 808 TRIKAHLNTLKKYTYGKHIVARVEK 832
>gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa
Japonica Group]
Length = 874
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK T ++ + + L YGC + + +++ L + ++ +
Sbjct: 419 GNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAEL 478
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 479 DGHVMRCVRD----QNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRV 534
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 535 LEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQM 594
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 595 SQQKFASNVIEK 606
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + + + L D YG ++ + + L
Sbjct: 518 VVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHV-----L 572
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P S +I + M K AS+VI KCL + + ++L
Sbjct: 573 EHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQIL------------- 619
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
I+EM G S H E + KD NYVVQ VL D + E I
Sbjct: 620 -----------ISEMLGSTNE------SEHLEVMMKDQFANYVVQKVLETCDDQQREAIL 662
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H+V + ++
Sbjct: 663 TRIKAHLNTLKKYTYGKHIVARVEK 687
>gi|255728835|ref|XP_002549343.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133659|gb|EER33215.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 970
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 45/252 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGY 85
L Q +I+ L K + G FLQK + + Y+ IF Y+Y ++L+ D +
Sbjct: 295 LIQLKSEILKLAKDQYGCRFLQKKID-ESLVPNYQVRLANFDIIFNQTYQYMYELIIDPF 353
Query: 86 GCHL---------------------------------ARSMQKLIKLLVGSPCISLVISA 112
G +L R++QK+I L S + L+I
Sbjct: 354 GNYLIQKLIAYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDNLNNSHQLGLLIKG 413
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+++ + VI K L + +Y + ++ +ATH GC L +N
Sbjct: 414 LKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 473
Query: 173 MRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELS 229
+ + G I F L D GNYV+Q+++ + L + KI + + L
Sbjct: 474 VTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFKIFQNFITFGISNLC 533
Query: 230 LLRCGSHLVEKY 241
L+ S++VEK+
Sbjct: 534 NLKFSSNVVEKF 545
>gi|336380323|gb|EGO21476.1| hypothetical protein SERLADRAFT_473873 [Serpula lacrymans var.
lacrymans S7.9]
Length = 360
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 122 FSKEASSVIIKCLETLDEQKNEVLY----------LAAMNHFR----ELATHVRGCVSLN 167
F KE ++KC++ D N V+ LA +N FR +L+TH GC L
Sbjct: 129 FVKELEPHVLKCVK--DANGNHVIQKLIERVSPERLAFINSFRGNVYDLSTHPYGCRVLQ 186
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD--------LKYSEKICS 219
+ + LLD + + L +D GNYVVQ VL G LK +I
Sbjct: 187 RCFEHLPEDQTRPLLDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQ 246
Query: 220 LLKGKFE----ELSLLRCGSH----LVEKYQRPS------IFTPCQHKYGNFVIQQALRV 265
+ + KF E +L+ + L+E+ P I T + ++ N+V+Q+AL V
Sbjct: 247 MARHKFASNVCEKALMTADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGV 306
Query: 266 TKGFQ 270
+G Q
Sbjct: 307 VEGEQ 311
>gi|269864410|ref|XP_002651563.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220064292|gb|EED42493.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 316
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 34/210 (16%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDE 139
L T YGC R +QKLI + I+ +IS +++ S + VI KC++
Sbjct: 107 LSTHIYGC---RVIQKLIDFITD---ITFIISELQDHILELIASPNGNHVIQKCIDRSII 160
Query: 140 QKNEVLYLAAMNHFRE---LATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKD 195
+ + ++ L+ GC L E+ P + LL +I + + L D
Sbjct: 161 ENKIFINNIINEFEKDCISLSQQRYGCRVLQRLF-EISAPEKVDRLLGIIVDNIQELIND 219
Query: 196 PSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--------------- 240
GNYV+QH++ + K E I + ELS + S+++EK
Sbjct: 220 RYGNYVIQHLIQ-SNYKQKEIIFKYIISNAVELSRYKFSSNVIEKCVVNASKRELEQFLE 278
Query: 241 -------YQRPSIFTPCQHKYGNFVIQQAL 263
+P++F C Y N+V+Q L
Sbjct: 279 SFAQLAENNKPALFYMCTDMYANYVVQNFL 308
>gi|336367609|gb|EGN95953.1| hypothetical protein SERLA73DRAFT_111921 [Serpula lacrymans var.
lacrymans S7.3]
Length = 372
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 122 FSKEASSVIIKCLETLDEQKNEVLY----------LAAMNHFR----ELATHVRGCVSLN 167
F KE ++KC++ D N V+ LA +N FR +L+TH GC L
Sbjct: 141 FVKELEPHVLKCVK--DANGNHVIQKLIERVSPERLAFINSFRGNVYDLSTHPYGCRVLQ 198
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGD--------LKYSEKICS 219
+ + LLD + + L +D GNYVVQ VL G LK +I
Sbjct: 199 RCFEHLPEDQTRPLLDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQ 258
Query: 220 LLKGKFE----ELSLLRCGSH----LVEKYQRPS------IFTPCQHKYGNFVIQQALRV 265
+ + KF E +L+ + L+E+ P I T + ++ N+V+Q+AL V
Sbjct: 259 MARHKFASNVCEKALMTADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGV 318
Query: 266 TKGFQ 270
+G Q
Sbjct: 319 VEGEQ 323
>gi|50552866|ref|XP_503843.1| YALI0E12001p [Yarrowia lipolytica]
gi|49649712|emb|CAG79436.1| YALI0E12001p [Yarrowia lipolytica CLIB122]
Length = 752
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 108/283 (38%), Gaps = 57/283 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLA---------- 90
IV + GS F+Q+ L IFE + LMTD +G ++
Sbjct: 432 IVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKFFVHGSNA 491
Query: 91 -----------------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEAS 127
R +QK I+ V + + +I+ + + + +
Sbjct: 492 QKAVLTKQMEGHVLSLSLQMYGCRVVQKAIEY-VDTAKQAHLINELDKHVLRCVKDQNGN 550
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI K +E + Q + + A +LATH GC + + + +L + +
Sbjct: 551 HVIQKAIEKIPPQHIQFIINAFNEQVYQLATHPYGCRVIQRMLEHCEE-AQAAILAELHN 609
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------- 240
+A L +D GNYV+QHVL G E + ++K S + S++VEK
Sbjct: 610 YAYHLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSRHKFASNVVEKCVIYGNR 669
Query: 241 YQRPSIFTPC---------------QHKYGNFVIQQALRVTKG 268
QR ++ + ++ N+VIQ+ L V++G
Sbjct: 670 RQRRALIEEIATEREDGTLPITVMMKDQFANYVIQKLLDVSEG 712
>gi|222629930|gb|EEE62062.1| hypothetical protein OsJ_16846 [Oryza sativa Japonica Group]
Length = 878
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + ++ + R +D + + VI KC+E + + +
Sbjct: 626 YGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVRD----QNGNHVIQKCIECIPQHAIQF 681
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P ++D I L++D GNYVVQ
Sbjct: 682 IVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQ 741
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 742 HVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 778
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + + + L D YG ++ + + L
Sbjct: 690 VVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHV-----L 744
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P S +I + M K AS+VI KCL + + ++L
Sbjct: 745 EHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQIL------------- 791
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
I+EM G S H E + KD NYVVQ VL D + E I
Sbjct: 792 -----------ISEMLGSTNE------SEHLEVMMKDQFANYVVQKVLETCDDQQREAIL 834
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H+V + ++
Sbjct: 835 TRIKAHLNTLKKYTYGKHIVARVEK 859
>gi|408398948|gb|EKJ78073.1| hypothetical protein FPSE_01534 [Fusarium pseudograminearum CS3096]
Length = 739
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
D++ L K G+ QK++ + +AV + L + YGC R QK++
Sbjct: 382 DMINLMKDLYGNYVCQKLIENGSMAQKRHVIQAVKGHIVQLSLNVYGC---RVFQKIVDC 438
Query: 100 LVGSPCISLVIS-AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
S + ++ +Y K + + + VI K ++T+ + + + +A H REL+
Sbjct: 439 CPPSHIVGILDEIHSYDVIKSLSQDECGNHVIQKLVQTMPPRDVKFITVACQEHARELSA 498
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
+ C L + R L++ + + L D GNYV H++ + ++
Sbjct: 499 NSFSCRILQRVLEYAEEDDRKQLVESLILMMDKLVTDQWGNYVAGHIIEHRGPEDRDRFF 558
Query: 219 SLLKGKFEELSLLRCGSHLVEK 240
+ + EL + GSH+VEK
Sbjct: 559 EHVMSRLFELCHHKLGSHVVEK 580
>gi|218195953|gb|EEC78380.1| hypothetical protein OsI_18154 [Oryza sativa Indica Group]
Length = 862
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK T ++ + + L YGC + + +++ L + ++ +
Sbjct: 575 GNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAEL 634
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 635 DGHVMRCVRD----QNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRV 690
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 691 LEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQM 750
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 751 SQQKFASNVIEK 762
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 79/205 (38%), Gaps = 37/205 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + + + L D YG ++ + + L
Sbjct: 674 VVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHV-----L 728
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P S +I + M K AS+VI KCL + + ++L
Sbjct: 729 EHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQIL------------- 775
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
I EM G S H E + KD NYVVQ VL D + E I
Sbjct: 776 -----------IGEMLGSTNE------SEHLEVMMKDQFANYVVQKVLETCDDQQREAIL 818
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H+V + ++
Sbjct: 819 TRIKAHLNTLKKYTYGKHIVARVEK 843
>gi|215768674|dbj|BAH00903.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + ++ + R +D + + VI KC+E + + +
Sbjct: 630 YGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVRD----QNGNHVIQKCIECIPQHAIQF 685
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P ++D I L++D GNYVVQ
Sbjct: 686 IVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQ 745
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I L G+ ++S + S+++EK
Sbjct: 746 HVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 782
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + + + L D YG ++ + + L
Sbjct: 694 VVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHV-----L 748
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P S +I + M K AS+VI KCL + + ++L
Sbjct: 749 EHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQIL------------- 795
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC 218
I+EM G S H E + KD NYVVQ VL D + E I
Sbjct: 796 -----------ISEMLGSTNE------SEHLEVMMKDQFANYVVQKVLETCDDQQREAIL 838
Query: 219 SLLKGKFEELSLLRCGSHLVEKYQR 243
+ +K L G H+V + ++
Sbjct: 839 TRIKAHLNTLKKYTYGKHIVARVEK 863
>gi|409082310|gb|EKM82668.1| hypothetical protein AGABI1DRAFT_53014, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 394
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS----KEASSVIIKCL 134
DL + YGC R +QK+I+L LV R+ + + + + VI K +
Sbjct: 171 DLSLNVYGC---RVVQKVIELCTAEQQTQLV-----RKIEPHVLTVVKDTNGNHVIQKFV 222
Query: 135 ETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSK 194
T+ ++ L + R+LA H GC L + + G++D + A+ L +
Sbjct: 223 MTVSPERLSFLR-TFRDAARQLAIHPYGCRVLQRCLEYLPNDYCRGMIDELHGIADSLMQ 281
Query: 195 DPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----------YQRP 244
D GNYVVQ++L G I + +KG ++S + S++VEK ++
Sbjct: 282 DQFGNYVVQYILQHGQPHDCVIIAAQMKGSVLKMSRHKFASNVVEKVLVNANPETRFKLV 341
Query: 245 SIFTPCQH-----------KYGNFVIQQAL 263
+H YGN+VIQ AL
Sbjct: 342 DEILTIEHGVDPVHALMMDAYGNYVIQTAL 371
>gi|269864285|ref|XP_002651521.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220064375|gb|EED42535.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 331
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 34/208 (16%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDE 139
L T YGC R +QKLI + I+ +IS +++ S + VI KC++
Sbjct: 122 LSTHIYGC---RVIQKLIDFITD---ITFIISELQDHILELIASPNGNHVIQKCIDRSII 175
Query: 140 QKNEVLYLAAMNHFRE---LATHVRGCVSLNNFINEMRGPRR-GGLLDLISSHAEFLSKD 195
+ + ++ L+ GC L E+ P + LL +I + + L D
Sbjct: 176 ENKIFINNIINEFEKDCISLSQQRYGCRVLQRLF-EISAPEKVDRLLGIIVDNIQELIND 234
Query: 196 PSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK--------------- 240
GNYV+QH++ + K E I + ELS + S+++EK
Sbjct: 235 RYGNYVIQHLIQ-SNYKQKEIIFKYIISNAVELSRYKFSSNVIEKCVVNASKRELEQFLE 293
Query: 241 -------YQRPSIFTPCQHKYGNFVIQQ 261
+P++F C Y N+V+Q+
Sbjct: 294 SFAQLAENNKPALFYMCTDMYANYVVQK 321
>gi|167378573|ref|XP_001734853.1| pumilio [Entamoeba dispar SAW760]
gi|165903440|gb|EDR28975.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 184
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 155 ELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS 214
E H GC + I + LL +I H+ L++D GNYVVQ+VL G
Sbjct: 15 ECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDR 74
Query: 215 EKICSLLKGKFEELSLLRCGSHLVEK-----------------YQRPSIFTPCQHKYGNF 257
I +KG LS+ + S+++EK YQ I Q ++ N+
Sbjct: 75 HNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQILEEIYQNNGILQMMQDQFANY 134
Query: 258 VIQQALRVTKGFQMTERNIIQEL 280
V+Q ++ + ER I EL
Sbjct: 135 VVQ---KIIEAIDSLEREKIVEL 154
>gi|407397270|gb|EKF27682.1| pumilio protein, putative [Trypanosoma cruzi marinkellei]
Length = 827
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG--------------- 86
V + + GS F+Q+ + +F +++ P L+TD +G
Sbjct: 416 VEFAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQ 475
Query: 87 -CHLA-----------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
H A R +QK I+++ + ++++ + + +
Sbjct: 476 LAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPE-GLDIILAELKGNVAKCIQDQNGNH 534
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q+ + A ELATH GC + + + + I
Sbjct: 535 VVQKCVE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-QEEVIFSEILKC 592
Query: 189 AEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L+KD GNYV+QHVL + D ++ + LK F E S + S+++EK
Sbjct: 593 VDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKNDFYEFSKQKFASNVMEK 645
>gi|336390132|gb|EGO31275.1| hypothetical protein SERLADRAFT_412664 [Serpula lacrymans var.
lacrymans S7.9]
Length = 623
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 45 GKTEG--GSLFLQKMLSGKDSTITYKIFEAVYKYPF----------DLMTDGYGCHL--- 89
G T G S+FLQ+ L D +KI +A+ F DL T+ YGCH+
Sbjct: 322 GSTHGHEASIFLQQKLKVADLDERHKIVDAICARGFEMMSHRGRVVDLATNCYGCHVLQK 381
Query: 90 ARSMQKLIKLLV------GSPCISLV---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQ 140
A ++ I+LL+ G P ++L+ S + + ++ ++ A + ++L +
Sbjct: 382 ALDCEEDIRLLIVSELLLGDPALTLINKHASHVWSKIMELSWTAPAPPIFAYVNKSLKGK 441
Query: 141 KNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD--LISSHAEF--LSKDP 196
+ LA H G + + + + +GG++D L A F ++K+
Sbjct: 442 ------------WASLACHETGSLVVQHAFENLEESAKGGIIDELLDQGPAVFGEITKNQ 489
Query: 197 SGNYVVQHVLGLGDLKYSE-KICSLLKGKFE 226
G+Y +QH+L G K+ + + LL G E
Sbjct: 490 WGSYCIQHILEHGSPKHRQITLDHLLSGLLE 520
>gi|426200142|gb|EKV50066.1| hypothetical protein AGABI2DRAFT_199387 [Agaricus bisporus var.
bisporus H97]
Length = 423
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 79 DLMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFS----KEASSVIIKCL 134
DL + YGC R +QK+I+L LV R+ + + + + VI K +
Sbjct: 171 DLSLNVYGC---RVVQKVIELCTAEQQTQLV-----RKIEPHVLTVVKDTNGNHVIQKFV 222
Query: 135 ETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSK 194
T+ ++ L + R+LA H GC L + + G++D + A+ L +
Sbjct: 223 MTVSPERLSFLR-TFRDAARQLAIHPYGCRVLQRCLEYLPNDYCRGMIDELHGIADSLMQ 281
Query: 195 DPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK----------YQRP 244
D GNYVVQ++L G I + +KG ++S + S++VEK ++
Sbjct: 282 DQFGNYVVQYILQHGQPHDCVIIAAQMKGSVLKMSRHKFASNVVEKVLVNANPETRFKLV 341
Query: 245 SIFTPCQH-----------KYGNFVIQQAL 263
+H YGN+VIQ AL
Sbjct: 342 DEILTIEHGVDPVHALMMDAYGNYVIQTAL 371
>gi|357492315|ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
gi|355517781|gb|AES99404.1| Pumilio-like protein [Medicago truncatula]
Length = 1066
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LL 182
+ + VI KC+E + E + + + + L+TH GC + + P+ ++
Sbjct: 846 QNGNHVIQKCIECVPEDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMM 905
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
D I L++D GNYVVQHVL G I G+ ++S + S+++EK
Sbjct: 906 DEILQCVSMLAQDQYGNYVVQHVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEK 963
>gi|326512976|dbj|BAK03395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ L + ++ + R +D + + VI KC+E + + E
Sbjct: 633 YGCRVIQKAIEVVDLDQQTKMVAELDGHVMRCVRD----QNGNHVIQKCIECIPQNIIEF 688
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ L+TH GC + + P+ ++D + L+ D GNYVVQ
Sbjct: 689 IVSTFYGQVVVLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEVLQSVCLLATDQYGNYVVQ 748
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HV+ G I L G+ ++S + S+++EK
Sbjct: 749 HVMEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEK 785
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 35/204 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIF-EAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V+L G +Q++L D T +I + V + L TD YG ++ + + + K
Sbjct: 697 VVVLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEVLQSVCLLATDQYGNYVVQHVMEHGKP 756
Query: 100 LVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATH 159
S I +I + M K AS+VI KCL + ++L
Sbjct: 757 HERSAIIEKLIG----QIVQMSQQKFASNVIEKCLSFGSPVERQIL-------------- 798
Query: 160 VRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICS 219
I EM G S H E + KD NYVVQ VL D + E I +
Sbjct: 799 ----------IGEMLGSTEE------SEHLEVMMKDQFANYVVQKVLETCDDQQREAILT 842
Query: 220 LLKGKFEELSLLRCGSHLVEKYQR 243
+K L G H+V + ++
Sbjct: 843 RIKAHLNTLKKYTYGKHIVARVEK 866
>gi|357130137|ref|XP_003566709.1| PREDICTED: pumilio homolog 1-like [Brachypodium distachyon]
Length = 857
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK +T ++ + + L YGC + + +++ L + ++ +
Sbjct: 571 GNYVVQKFFEHGSTTQIKELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVAEL 630
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 631 DGHIMRCVRD----QNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRV 686
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 687 LEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQM 746
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 747 SQQKFASNVIEK 758
>gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa Japonica Group]
Length = 1001
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 677 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 736
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLV---ISAAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 737 QRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRD----Q 792
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G +G ++D
Sbjct: 793 NGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIID 852
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHVL G +I S L G+ +S + S+++EK
Sbjct: 853 EILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEK 909
>gi|168012831|ref|XP_001759105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689804|gb|EDQ76174.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK ++ + ++ L YGC + + +++ + + +S +
Sbjct: 46 GNYVIQKFFEHGTQQQRRELASQLVEHVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSEL 105
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + K + A N L+TH GC +
Sbjct: 106 DGHVMRCVRD----QNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRV 161
Query: 170 INEMRGPRR-GGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ ++ G+++ I L++D GNYVVQHVL G +I + L G+ ++
Sbjct: 162 LEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQM 221
>gi|222640878|gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
Length = 1138
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 814 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 873
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 874 QRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRD----Q 929
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G +G ++D
Sbjct: 930 NGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIID 989
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHVL G +I S L G+ +S + S+++EK
Sbjct: 990 EILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEK 1046
>gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|42409165|dbj|BAD10431.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|215694322|dbj|BAG89315.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1006
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 682 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 741
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLV---ISAAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 742 QRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRD----Q 797
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G +G ++D
Sbjct: 798 NGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIID 857
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHVL G +I S L G+ +S + S+++EK
Sbjct: 858 EILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEK 914
>gi|224097831|ref|XP_002311080.1| predicted protein [Populus trichocarpa]
gi|222850900|gb|EEE88447.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD----------------- 83
+V + GS F+Q+ L T KIF + + LMTD
Sbjct: 676 VVEFSTDQYGSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVFGNYVIQKFLDQGTES 735
Query: 84 -------------------GYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
YGC + + ++I + + ++ + + + +D +
Sbjct: 736 QRIELASQLTGHVLPLSLQMYGCRVIQKALEVIDVDRQTQMVAELDGSVMKCIRD----Q 791
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG-PRRGGLLD 183
+ VI KC+E + + + + A L+TH GC + + + + ++D
Sbjct: 792 NGNHVIQKCIECVPGDRIQFITSAFYGQVVALSTHPYGCRVIQRVLEHCKDMNTQQVIMD 851
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I L++D GNYV+QHVL G + I L G+ +S + S++VEK
Sbjct: 852 EIMQSVCALAQDQYGNYVIQHVLEHGKPQQRSVIIRKLAGQIVLMSQQKFASNVVEK 908
>gi|328866169|gb|EGG14555.1| RNA binding protein [Dictyostelium fasciculatum]
Length = 652
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK I+ + I ++I + + + VI KC+E + +
Sbjct: 412 YGC---RVIQKAIESIELDQQI-MLIQELDGHIVQCVTDQNGNHVIQKCIEKIPTNLIQF 467
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ + H LATH GC + + + +L+ + A L +D GNYV+QH
Sbjct: 468 IIDSFNGHIYHLATHPYGCRVIQRILEHCSEQQVAPILEELMRCAVSLVQDQYGNYVIQH 527
Query: 205 VLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
VL G I L + +LS + S+++EK
Sbjct: 528 VLEHGTQSDKSAIVQKLHNQVYQLSQHKFASNVIEK 563
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 20/225 (8%)
Query: 33 LLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARS 92
L+ + D IV + G+ +QK + + + I ++ + + L T YGC + +
Sbjct: 432 LIQELDGHIVQCVTDQNGNHVIQKCIEKIPTNLIQFIIDSFNGHIYHLATHPYGCRVIQR 491
Query: 93 MQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNH 152
+ + +P + ++ A +D + + VI LE + + N
Sbjct: 492 ILEHCSEQQVAPILEELMRCAVSLVQD----QYGNYVIQHVLEHGTQSDKSAIVQKLHNQ 547
Query: 153 FRELATH------VRGCVSLNN------FINEMRGPRRGGLLDLISSHAEFLSKDPSGNY 200
+L+ H + CV + INE+ G + G SS + KDP NY
Sbjct: 548 VYQLSQHKFASNVIEKCVQYGSTAERAMIINEILGDQSGT----TSSAMLKVLKDPYANY 603
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
V+Q +L + D E I ++ L + G H++ + ++ S
Sbjct: 604 VIQKILDIVDQSQREMIIQRIQPYIATLRKVTYGKHIISRIEKIS 648
>gi|71411474|ref|XP_807985.1| pumilio/PUF RNA binding protein 6 [Trypanosoma cruzi strain CL
Brener]
gi|70872096|gb|EAN86134.1| pumilio/PUF RNA binding protein 6, putative [Trypanosoma cruzi]
Length = 827
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG--------------- 86
V + + GS F+Q+ + +F +++ P L+TD +G
Sbjct: 416 VEFAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQ 475
Query: 87 -CHLA-----------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
H A R +QK I+++ + ++++ + + +
Sbjct: 476 LAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPE-GLDIILAELKGNVAKCIQDQNGNH 534
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q+ + A ELATH GC + + + + I
Sbjct: 535 VVQKCVE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-QEEVIFSEILKC 592
Query: 189 AEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L+KD GNYV+QHVL + D ++ + LK F E S + S+++EK
Sbjct: 593 VDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEK 645
>gi|35186936|gb|AAQ84130.1| pumilio protein 1 [Trypanosoma cruzi]
Length = 827
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG--------------- 86
V + + GS F+Q+ + +F +++ P L+TD +G
Sbjct: 416 VEFAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQ 475
Query: 87 -CHLA-----------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
H A R +QK I+++ + ++++ + + +
Sbjct: 476 LAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPE-GLDIILAELKGNVAKCIQDQNGNH 534
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q+ + A ELATH GC + + + + I
Sbjct: 535 VVQKCVE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-QEEVIFSEILKC 592
Query: 189 AEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L+KD GNYV+QHVL + D ++ + LK F E S + S+++EK
Sbjct: 593 VDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEK 645
>gi|440301750|gb|ELP94136.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 443
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 121/303 (39%), Gaps = 80/303 (26%)
Query: 38 DYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLI 97
+Y + L K + GS +Q L +IF+++ FDLM D +G ++ +QK I
Sbjct: 128 NYTVADLCKEQQGSRRIQAFLQTAKEYEVTEIFDSLKGDLFDLMLDLFGNYV---VQKFI 184
Query: 98 KLLVGSPCISLVISAAYRRF-------KDMMFSKE--ASSVIIKCLETLDEQKNEVLYLA 148
++ V +R++ K +M SK VI K +E ++ E L+
Sbjct: 185 EVGV----------EKHRQYVRDLVKCKIIMLSKHMYGCRVIQKIVEYSSSEQQEELFQK 234
Query: 149 AMNHFRELATHVRGCVSLNNFINEMRGPRRGGL--------LDLISSHA----------- 189
R+L G + F+ + G GG ++LISSH
Sbjct: 235 IEGEVRDLIVDQNGNHVVQKFVEKYDGC--GGRVIDIIKDDIELISSHGFGCRVIQRLIE 292
Query: 190 ------------------EFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLL 231
+ LS + GNYV+QH+L G ++I S ++ F E SL+
Sbjct: 293 KSDTTINTIIYNKVRGNIQVLSMNQFGNYVIQHLLEFGSQPIRDEIISEVQDIFCESSLM 352
Query: 232 RCGSHLVEK--------YQR-----------PSIFTPCQHKYGNFVIQQALRVTKGFQMT 272
+ S+++EK QR S+ + ++ + N+V+Q+ L V T
Sbjct: 353 KFSSNVMEKCVQFGSSEKQRVLIGKVFSCNADSVVSMMKNPFANYVLQRMLTVMNKDDRT 412
Query: 273 ERN 275
+ N
Sbjct: 413 KFN 415
>gi|407834788|gb|EKF99041.1| pumilio protein, putative [Trypanosoma cruzi]
Length = 827
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYG--------------- 86
V + + GS F+Q+ + +F +++ P L+TD +G
Sbjct: 416 VEFAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQ 475
Query: 87 -CHLA-----------------RSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASS 128
H A R +QK I+++ + ++++ + + +
Sbjct: 476 LAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPE-GLDIILAELKGNVAKCIQDQNGNH 534
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC+E + Q+ + A ELATH GC + + + + I
Sbjct: 535 VVQKCVE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-QEEVIFSEILKC 592
Query: 189 AEFLSKDPSGNYVVQHVLG-LGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L+KD GNYV+QHVL + D ++ + LK F E S + S+++EK
Sbjct: 593 VDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEK 645
>gi|345567293|gb|EGX50227.1| hypothetical protein AOL_s00076g302 [Arthrobotrys oligospora ATCC
24927]
Length = 880
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 103/278 (37%), Gaps = 55/278 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L S IF + LMTD +G +
Sbjct: 515 VVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVIQKFFEHGNQL 574
Query: 89 ----LARSMQ----KLIKLLVGSPCISLVISAAYRRFKDMMF------------SKEASS 128
LA+ M+ KL + G + + + + + +
Sbjct: 575 QKAMLAKQMEGHVLKLSLQMYGCRVVQKALEHVLTEQQATLIKEIDGNVLKCVKDQNGNH 634
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ K +E + Q + + A + LATH GC + + P + +L ++
Sbjct: 635 VVQKAIERVPAQHIDFILKAFKGQVQSLATHPYGCRVIQRMLEHCDEPAQSSILQELNMC 694
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY------- 241
L +D GNYV QHV+ G + KI ++ + S + S++VEK
Sbjct: 695 LYALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQHVIQFSKHKFASNVVEKSIQYGNEK 754
Query: 242 QR----------------PSIFTPCQHKYGNFVIQQAL 263
QR P + T + +YGN+VIQ+ L
Sbjct: 755 QRKEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQKLL 792
>gi|301099064|ref|XP_002898624.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105049|gb|EEY63101.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 907
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI + L+ + + N+ ++ A + TH GC L ++ ++ ++ +
Sbjct: 621 VIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQ 680
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
A L +DP GNYVVQ+VL + + + G ELS+ + S+++EK
Sbjct: 681 AMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPER 740
Query: 241 -YQR--------PSIFTPCQHKYGNFVIQQALRV 265
Q+ P + Q ++ N+V+Q+AL V
Sbjct: 741 VRQKYIAEITSCPKMNKMLQDQFANYVVQRALCV 774
>gi|341874392|gb|EGT30327.1| CBN-PUF-9 protein [Caenorhabditis brenneri]
Length = 688
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR-------- 91
+++ K + GS F+Q+ L S IF V ++ +LMTD +G ++ +
Sbjct: 335 NVIEFAKDQHGSRFIQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQKFFEYGNN 394
Query: 92 ------------SMQKLIKLLVGSPCISLVISAAYRRFKDMMF------------SKEAS 127
++ KL + G I + +++ + + +
Sbjct: 395 DQRNQLVATIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGN 454
Query: 128 SVIIKCLETLDEQKNEVLYLA----AMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLD 183
VI K +E ++ + + + A ++ L+ H GC + + ++ +LD
Sbjct: 455 HVIQKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQKQPVLD 514
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELSLLRCGSHLVEK 240
++ H + L D GNYV+QHV+ G K E+I ++ + + + S+++EK
Sbjct: 515 ALNLHLKQLVLDQYGNYVIQHVIEHGSAKDKEQIVKDVINDDLLKFAQHKFASNVIEK 572
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 191 FLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ KDP NYVVQ +L + D ++ +KI +K L G H++ KY R
Sbjct: 602 LMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKYNFGKHILRKYIR 654
>gi|340959315|gb|EGS20496.1| hypothetical protein CTHT_0023280 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 866
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 25/240 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK K+ +A++ FDL T YGC R +QK ++ ++ LV
Sbjct: 559 GNYVIQKFFEHGSMAHKTKLAQAMHGKMFDLSTQTYGC---RVVQKALEHVLVEEQAVLV 615
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
K ++ ++ + V+ + + + + + + + ELA+ C +
Sbjct: 616 KELQPEILK-VIKNQNGNHVVQQIIAVVSRSEIDFIMDSMKGRISELASDAYACRVVQRV 674
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEK--------ICSLL 221
+ + +L + + A+ L D GNYV QHV+ G + K + L
Sbjct: 675 LERGTDDDKAFILKELHACAQMLVVDQYGNYVAQHVIQHGKPEDRSKMIEVVIPQVVGLS 734
Query: 222 KGKFEELSLLRCGSHLVEKYQRP-------------SIFTPCQHKYGNFVIQQALRVTKG 268
K KF + C +H + QR S+ + YGN+VIQ+ L KG
Sbjct: 735 KHKFASNVVETCIAHGTPEQQRAIRDQILPANDTQNSLLQLMKDPYGNYVIQKLLDTLKG 794
>gi|391327709|ref|XP_003738339.1| PREDICTED: pumilio homolog 1-like [Metaseiulus occidentalis]
Length = 374
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 104/278 (37%), Gaps = 50/278 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
++ + + GS F+Q L + IF ++ + + LMT +G ++ + +
Sbjct: 38 VIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKLFDFGSEE 97
Query: 94 QKLI-----------------------KLLVGSP--CISLVISAAYRRFKDMMFSKEASS 128
QKL K LV P +I + +
Sbjct: 98 QKLALAGKMTGHIVNLTMHIYGCRVMQKALVSLPTEVRKKLIDELRNHVVQCANDENGNH 157
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ KC ET++ + + + R+L +H C + + + + +L I ++
Sbjct: 158 VMQKCFETIEPGYLQFIVDECIGKVRQLCSHSYACRVIQRLLEYCKFEQSIPILQEIHAN 217
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------- 240
L++D GNYV+Q++L G K I ++G LS + S+++EK
Sbjct: 218 TLELAQDQYGNYVIQYILQHGLPKDKSAIIQAIRGNVVALSCHKYASNVMEKCVTHGSSL 277
Query: 241 ----------YQRPSIFTPCQHKYGNFVIQQALRVTKG 268
+ IF + + N+V+Q+ + V
Sbjct: 278 ERTVLMEEVCATKDGIFKMMKDPFANYVVQRMVEVADA 315
>gi|403372240|gb|EJY86013.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 933
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 129 VIIKCLETL-DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI CL+ +EQ ++ +Y + + +AT GC + + + + L+
Sbjct: 678 VIQICLDCFANEQFSQPIYQTVLQNCSRIATDKHGCCVVQKLLCTSKFCIQSELVKKSLE 737
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS-- 245
+ L D GNYV+Q VL D + +ICS + KF+ + S++VE R +
Sbjct: 738 QIDSLINDQYGNYVIQQVLKFNDYLINIQICSYICTKFDYFCTQKISSNVVETAIRITSN 797
Query: 246 ----IFTPCQHK------------YGNFVIQQALRVTKGFQ 270
+F HK +GN+VIQ L+++ FQ
Sbjct: 798 ECKRVFFNFLHKNVGVFKGLMMDQFGNYVIQAVLQMSCDFQ 838
>gi|225448992|ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + + ++ + + + +D + + VI KC+E + + + +
Sbjct: 776 YGCRVIQKALEVVDVDRQTQMVAELDGSVMKCVRD----QNGNHVIQKCIECVPQDRIQF 831
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMR-GPRRGGLLDLISSHAEFLSKDPSGNYVVQ 203
+ + L+TH GC + + + ++D I L+ D GNYV+Q
Sbjct: 832 IISSFYGQVVSLSTHPYGCRVIQRVLEHCDDSSTQQIIMDEIMQSVCILAHDQYGNYVIQ 891
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G I S L G+ ++S + S++VEK
Sbjct: 892 HVLQYGKPHERSAIISKLAGQIVKMSQQKFASNVVEK 928
>gi|403344427|gb|EJY71557.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 933
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 129 VIIKCLETL-DEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI CL+ +EQ ++ +Y + + +AT GC + + + + L+
Sbjct: 678 VIQICLDCFANEQFSQPIYQTVLQNCSRIATDKHGCCVVQKLLCTSKFCIQSELVKKSLE 737
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS-- 245
+ L D GNYV+Q VL D + +ICS + KF+ + S++VE R +
Sbjct: 738 QIDSLINDQYGNYVIQQVLKFNDYLINIQICSYICTKFDYFCTQKISSNVVETAIRITSN 797
Query: 246 ----IFTPCQHK------------YGNFVIQQALRVTKGFQ 270
+F HK +GN+VIQ L+++ FQ
Sbjct: 798 ECKRVFFNFLHKNVGVFKGLMMDQFGNYVIQAVLQMSCDFQ 838
>gi|354545908|emb|CCE42637.1| hypothetical protein CPAR2_202800 [Candida parapsilosis]
Length = 986
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 51/251 (20%)
Query: 40 DIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGYGCHL-- 89
+I+ L K + G FLQK + ++ +Y+ IF+ VY Y +L+ D +G +L
Sbjct: 294 EILKLAKDQYGCRFLQKKID-ENLIPSYQVRAANFEIIFDQVYPYMCELIVDPFGNYLVQ 352
Query: 90 -------------------------------ARSMQKLIKLLVGSPCISLVISAAYRRFK 118
R++QK+I L + ++L+I
Sbjct: 353 KMIPYCSDANLDLMLEILQYNLCQISINQHGTRALQKIIDNLNSTSQLNLLIKGLKPYII 412
Query: 119 DMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRR 178
+++ + VI K L + + +Y + + +ATH GC L +N + +
Sbjct: 413 ELIRDLNGNHVIQKILNKYEPPNCQFIYDSIIEDLYTVATHKHGCCVLQKCLNHVTQQQL 472
Query: 179 GGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE----ELSLLR 232
I F L D GNYV+Q+++ + ++ S C + + F+ L +
Sbjct: 473 NQFSKAILKFDNFKMLINDQFGNYVLQYLISINSIEVS---CEMFQNFFQFGLTNLCNSK 529
Query: 233 CGSHLVEKYQR 243
S++VEK+ +
Sbjct: 530 FSSNVVEKFMK 540
>gi|326469363|gb|EGD93372.1| hypothetical protein TESG_08275 [Trichophyton tonsurans CBS 112818]
Length = 658
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 34/215 (15%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMF----SKEASSVIIKCLE 135
L YGC R++QK ++ ++ ++V + +D + ++ + VI K +E
Sbjct: 335 LSVQTYGC---RTVQKALEHVLVEQQATMV-----KELEDSVMKCVTNQNGNHVIQKAIE 386
Query: 136 TLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKD 195
+ Q + ATH GC + + R +L I + L D
Sbjct: 387 RVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHACTPSLISD 446
Query: 196 PSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-------QR---PS 245
GNYV+QH++ G+ KI S++ G+ S + S++VEK QR
Sbjct: 447 QYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTMEQRLAITR 506
Query: 246 IFTPCQHK------------YGNFVIQQALRVTKG 268
I + K YGN+VIQ++L V +G
Sbjct: 507 ILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEG 541
>gi|161138148|gb|ABX58007.1| pumilio-like protein 2 [Echinococcus granulosus]
Length = 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + + + + L++H GC + + + +LD +
Sbjct: 3 VIQKCIECVPSAELDFIITTFRGQVYTLSSHPYGCRVIQRILEHCSTEQTRVILDELHQS 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L D GNYVVQHVL G + +I + L+G+ LS + S+++EK
Sbjct: 63 VDNLVNDQYGNYVVQHVLEHGSQEDKSRIINSLRGRVATLSEHKFASNVMEK 114
>gi|125562207|gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
Length = 1806
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL----------- 89
IV + GS F+Q+ L + +F V + LMTD +G ++
Sbjct: 1475 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 1534
Query: 90 ----------------------ARSMQKLIKLLVGSPCISLVIS---AAYRRFKDMMFSK 124
R +QK ++++ I LV R +D +
Sbjct: 1535 QRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRD----Q 1590
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E + + + A L+ H GC + + G +G ++D
Sbjct: 1591 NGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIID 1650
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I A L++D GNYV QHVL G +I S L G+ +S + S+++EK
Sbjct: 1651 EILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEK 1707
>gi|303324307|ref|XP_003072141.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111851|gb|EER29996.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 835
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 110/284 (38%), Gaps = 58/284 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
IV + GS F+Q+ L +S ++F+ + LM D +G +
Sbjct: 447 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 506
Query: 89 ----LARSMQKLIKLLVGSPCISLVISAAYRRF---KDMMFSKEASSVIIKCLETLDEQK 141
LA+ M I L V+ A + KE + +IKC++ D+
Sbjct: 507 QKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELENQVIKCVK--DQNG 564
Query: 142 NEVLYLAA-----------MNHF----RELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F + A H GC + + R +L +
Sbjct: 565 NHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEADRDAILAELH 624
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQR 243
+ L D GNYV+QHV+ G + ++ +++ + S + S++VEK Y
Sbjct: 625 LCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNVVEKTLEYGG 684
Query: 244 PS-------IFTPCQHK------------YGNFVIQQALRVTKG 268
P+ IFT + +GN+VIQ+ L+V KG
Sbjct: 685 PNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLKG 728
>gi|238878269|gb|EEQ41907.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 965
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGY 85
L Q +I+ L K + G FLQK + + Y+ IF +Y + ++L+ D +
Sbjct: 280 LTQLKSEILKLAKDQYGCRFLQKKID-ESLVPNYQVRLANFEIIFNQIYSHVYELIVDPF 338
Query: 86 GCHL---------------------------------ARSMQKLIKLLVGSPCISLVISA 112
G +L R++QK+I L S + L+I
Sbjct: 339 GNYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIKG 398
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+++ + VI K L + + +Y + ++ +ATH GC L +N
Sbjct: 399 LKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 458
Query: 173 MRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELS 229
+ + G I F L D GNYV+Q+++ + L + +I + + L
Sbjct: 459 VTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISNLC 518
Query: 230 LLRCGSHLVEKY 241
L+ S++VEK+
Sbjct: 519 NLKFSSNVVEKF 530
>gi|414869535|tpg|DAA48092.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1043
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++++ I LV + + + + VI KC+E + +
Sbjct: 799 YGC---RVIQKALEVMELDQKIDLVHELDGHIMR-CVRDQNGNHVIQKCIECVPTEHIGF 854
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+ H GC + + G +G ++D I L++D GNYV Q
Sbjct: 855 VVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCIIDEILQWVCILAQDQYGNYVTQ 914
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I + L G+ +S + S+++EK
Sbjct: 915 HVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEK 951
>gi|414869530|tpg|DAA48087.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1036
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC R +QK ++++ I LV + + + + VI KC+E + +
Sbjct: 792 YGC---RVIQKALEVMELDQKIDLVHELDGHIMR-CVRDQNGNHVIQKCIECVPTEHIGF 847
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+ H GC + + G +G ++D I L++D GNYV Q
Sbjct: 848 VVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCIIDEILQWVCILAQDQYGNYVTQ 907
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I + L G+ +S + S+++EK
Sbjct: 908 HVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEK 944
>gi|344234445|gb|EGV66315.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 746
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 43/251 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGK---DSTITYK----IFEAVYKYPFDLMTDGYG 86
L+Q DI+ L K + G FLQK + + +I Y IF +Y ++L+ D +G
Sbjct: 132 LSQLKSDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFG 191
Query: 87 CHL---------------------------------ARSMQKLIKLLVGSPCISLVISAA 113
+L R++QK+I+ L + L+ S
Sbjct: 192 NYLIQKLIKYASNENLNLMLDILQSNLFQISINQHGTRALQKIIESLNSPYQLDLLTSGL 251
Query: 114 YRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEM 173
+++ + VI K L + + +Y + +N +ATH GC L +N +
Sbjct: 252 KPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCLNHV 311
Query: 174 RGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICS-LLKGKFEELSL 230
+ ++ I + L D GNYV+Q+++ + D + K S L++
Sbjct: 312 TYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNLVRFDMIHYCN 371
Query: 231 LRCGSHLVEKY 241
L+ S+++EK+
Sbjct: 372 LKFSSNVIEKF 382
>gi|322702154|gb|EFY93902.1| hypothetical protein MAC_00393 [Metarhizium acridum CQMa 102]
Length = 829
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 114/293 (38%), Gaps = 57/293 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLAR--------- 91
+V + GS F+Q+ L +S ++F + LM D +G ++ +
Sbjct: 438 VVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQV 497
Query: 92 ----------------SMQKLIKLLVGSPCISLVISAAYRRFKDM-------MFSKEASS 128
SMQ +V +++ K++ + + +
Sbjct: 498 QKKVLAEKMKGKVVDLSMQVYACRVVQKALEHVLVEQQAELTKELEPDILRVIRDQNGNH 557
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ K +E + Q + + A LA+H GC + + + ++ + +
Sbjct: 558 VVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDKMEIMTELHAS 617
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
A+ L D GNYV QHV+ G + ++ L+ + LS + S++VEK
Sbjct: 618 AQILITDQYGNYVAQHVIQNGKPEDRARMIDLVMAQLLTLSKHKFASNVVEKCIEHGTAE 677
Query: 242 QRPSI-----------FTPCQH----KYGNFVIQQALRVTKGFQMTERNIIQE 279
QR SI +P Q +YGN+VIQ+ L +G ER+++ E
Sbjct: 678 QRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEG---RERHMLVE 727
>gi|159491213|ref|XP_001703567.1| puf protein [Chlamydomonas reinhardtii]
gi|158270641|gb|EDO96479.1| puf protein [Chlamydomonas reinhardtii]
Length = 314
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 38/248 (15%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK L K+ A++ + L YGC R +QK ++ + LV
Sbjct: 41 GNYVVQKFLEHGTPEQRLKLGRALHGHVLQLSLQMYGC---RVVQKALETFPEEAQMELV 97
Query: 110 IS---AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFR----ELATHVRG 162
R +D + + VI KC+E + + A +++F L+TH G
Sbjct: 98 TELDGHIMRCVRD----QNGNHVIQKCIECVPTHR----IAAVLDNFLLCVVPLSTHPFG 149
Query: 163 CVSLNNFINEMR-GPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLL 221
C + + ++ RR ++ I + A L++D GNYV+QHVL G + I + L
Sbjct: 150 CRIIQRILEHVKDARRRSAVMSDILAAAVQLTQDQYGNYVIQHVLERGTPEERASIAASL 209
Query: 222 KGKFEELSLLRCGSHLVEK-------YQRPSIFT--------PCQ----HKYGNFVIQQA 262
LS+ + S++VEK R + + P Q ++GN+V+Q+
Sbjct: 210 ASSVVPLSMHKFASNVVEKCLTYGSTADRDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKV 269
Query: 263 LRVTKGFQ 270
L V Q
Sbjct: 270 LEVCSDEQ 277
>gi|378730303|gb|EHY56762.1| hypothetical protein HMPREF1120_04829 [Exophiala dermatitidis
NIH/UT8656]
Length = 907
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 27/247 (10%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + + + + L YGC R +QK ++ SLV
Sbjct: 593 GNYVIQKLFEHGNQAQKKALANQMKGHVLQLSMQMYGC---RVVQKAFDHVLTDQQASLV 649
Query: 110 --ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN 167
+ ++ ++ + V+ K +E + + + + A +++TH GC +
Sbjct: 650 KELDGPNQQILKVVKDNNGNHVVQKAIERIPGEHIQFIVDAHRGQMLKMSTHQYGCRVVQ 709
Query: 168 NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
+ R + +LD + H L D GNYVVQH++ G+ ++ ++
Sbjct: 710 RMLEHCRPEAKRAILDELLEHTLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLA 769
Query: 228 LSLLRCGSHLVEKY-------QRPSIF-----------TPC----QHKYGNFVIQQALRV 265
S + S++VEK QR I TP + +YGN+V+Q+
Sbjct: 770 FSKHKFASNIVEKSIEHADADQRSQILHTLTAPDEQGNTPVFGLMKDQYGNYVLQKVHDQ 829
Query: 266 TKGFQMT 272
+G +++
Sbjct: 830 LQGAELS 836
>gi|20513851|gb|AAM22812.1|AF427791_3 BPM [Hordeum vulgare subsp. vulgare]
Length = 911
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK +T ++ + + L YGC + + +++ L + + +
Sbjct: 625 GNYVVQKFFEHGSTTQIKELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVGEL 684
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
R +D + + VI KC+E + + + + L+TH GC +
Sbjct: 685 DGHIMRCVRD----QNGNHVIQKCIECIPQDIIQFIVSTFYGQVVLLSTHPYGCRVIQRV 740
Query: 170 INEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ P ++D I L++D GNYVVQHVL G I L G+ ++
Sbjct: 741 LEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQIVQM 800
Query: 229 SLLRCGSHLVEK 240
S + S+++EK
Sbjct: 801 SQQKFASNVIEK 812
>gi|161138150|gb|ABX58008.1| pumilio-like protein 2 [Echinococcus granulosus]
Length = 146
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + + + + L++H GC + + + +LD +
Sbjct: 3 VIQKCIECVPSAELDFIITTFRGQVYTLSSHPYGCRVIQRILEHCSTEQTXVILDELHQS 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L D GNYVVQHVL G + ++ + L+G+ LS + S+++EK
Sbjct: 63 VDNLVNDQYGNYVVQHVLEHGSQEDKSRVINSLRGRVATLSEHKFASNVMEK 114
>gi|440800301|gb|ELR21340.1| Pumiliofamily RNA binding repeat domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1039
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM-----QK 95
IV + GS F+Q+ L +F+ + LMTD +G ++ + +
Sbjct: 716 IVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVIQKFFEHGTPE 775
Query: 96 LIKLLVGSPCISLVISAAYRRF---------------KDMMFSKEASSVIIKCLETLDEQ 140
IK+L G I V++ + + + + KE I+KC++ D+
Sbjct: 776 QIKIL-GDELIGNVLALSMQMYGCRVIQKALEVISVEQQEKVVKELEGNIMKCVK--DQN 832
Query: 141 KNEVLY------LAAMNHF--RELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL 192
N V+ + + F LATH GC + + + +LD + L
Sbjct: 833 GNHVIQKCIEKVPSPLIQFIVYHLATHPYGCRVIQRILEYCTEEQTTPILDELLRCTISL 892
Query: 193 SKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+D GNYV+QHVL G + I L+G+ +LS + S++VEK
Sbjct: 893 VQDQYGNYVIQHVLEHGKPQDKAPILHKLRGQLLQLSQHKFASNVVEK 940
>gi|297803524|ref|XP_002869646.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
gi|297315482|gb|EFH45905.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLL- 182
+ + VI KC+E + + + A L+ H GC + + + +
Sbjct: 650 QNGNHVIQKCIENIPADRVGFMLHAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFIT 709
Query: 183 DLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ I LSKD GNYV QHVL G + E+I L G +LSL + S+++EK
Sbjct: 710 EEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLSLHKFASNVIEK 767
>gi|68467297|ref|XP_722310.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
gi|68467526|ref|XP_722196.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444276|gb|EAL03552.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
Length = 938
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGY 85
L Q +I+ L K + G FLQK + + Y+ IF +Y + ++L+ D +
Sbjct: 279 LTQLKSEILKLAKDQYGCRFLQKKID-ESLVPNYQVRLANFEIIFNQIYSHVYELIVDPF 337
Query: 86 GCHL---------------------------------ARSMQKLIKLLVGSPCISLVISA 112
G +L R++QK+I L S + L+I
Sbjct: 338 GNYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIKG 397
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+++ + VI K L + + +Y + ++ +ATH GC L +N
Sbjct: 398 LKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 457
Query: 173 MRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELS 229
+ + G I F L D GNYV+Q+++ + L + +I + + L
Sbjct: 458 VTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISNLC 517
Query: 230 LLRCGSHLVEKY 241
L+ S++VEK+
Sbjct: 518 NLKFSSNVVEKF 529
>gi|49387789|dbj|BAD26354.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
gi|49389128|dbj|BAD26407.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
Length = 498
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%)
Query: 116 RFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRG 175
+ + ++ + VI C++ +VL A + + E+A H+ G + L N + +
Sbjct: 291 KMQSLVTDSDKLRVIQACIQCFPADIAKVLVDAVVENCIEIACHLNGLLFLQNCLGHITL 350
Query: 176 PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGS 235
+ + + ++ +L+K SGNY+VQ VL G + E I S K + +L+ + S
Sbjct: 351 EEKYKIFTQVCINSVYLAKHRSGNYIVQDVLEFGHPFHLEIITSCFKTHYVDLARQKYSS 410
Query: 236 HLVEK 240
+VEK
Sbjct: 411 RVVEK 415
>gi|357443169|ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 1176
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 93/237 (39%), Gaps = 41/237 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTD----------------- 83
+V + GS F+Q+ L KIF + + LMTD
Sbjct: 647 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDS 706
Query: 84 -------------------GYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
YGC + + +++ + S +S + A + +D +
Sbjct: 707 QRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRD----Q 762
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLD 183
+ VI KC+E++ + + + + + L+TH GC + + + +++
Sbjct: 763 NGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIME 822
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
I L++D GNYV+QH+L G + S L G+ ++S + S+++EK
Sbjct: 823 EIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEK 879
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 38/212 (17%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKI-FEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V L G +Q++L D T +I E + + L D YG ++ + + L
Sbjct: 791 VVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYVIQHI-----L 845
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P ++VIS + M K AS+VI KCL ++ ++L
Sbjct: 846 EHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQIL------------- 892
Query: 159 HVRGCVSLNNFINEMRGP-------RRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDL 211
+NEM G +R + D ++ + + + KDP GNYVVQ VL D
Sbjct: 893 -----------VNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNYVVQKVLETCDD 941
Query: 212 KYSEKICSLLKGKFEELSLLRCGSHLVEKYQR 243
+ E I S +K L G H+V + ++
Sbjct: 942 QSLELILSRIKVHLNALKRYTYGKHIVSRVEK 973
>gi|255729316|ref|XP_002549583.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
gi|240132652|gb|EER32209.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
Length = 883
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 33/232 (14%)
Query: 42 VLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL-------ARSMQ 94
V K + GS F+Q+ L IF +++ +DLMTD +G ++ S Q
Sbjct: 554 VEFTKDQHGSRFIQQKLPEASDEEKQTIFNEIWEISYDLMTDVFGNYVIQKYFEHGNSTQ 613
Query: 95 KLIKL-------------LVGSPCISLVISAA--------YRRFKDMMF----SKEASSV 129
K + L + G + + A KD + + + V
Sbjct: 614 KQVLLESMIGHIHELSLQMYGCRVVQRALEAIETEGQLRIIEELKDHILVCCKDQNGNHV 673
Query: 130 IIKCLETLDEQKNEVLYLAAMN-HFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
I K +E + L +++ L+TH GC + + + +L +++
Sbjct: 674 IQKSIEKIKPFSKIRFILTSLDTQIYHLSTHPYGCRVIQRLLEFSDEDDQKMILTQLNNF 733
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+L D GNYV+QH+L G + E I ++ G + S + S+++EK
Sbjct: 734 LYYLILDQYGNYVIQHILENGTPEEKEPILEIVLGSVVQFSKHKFASNVIEK 785
>gi|149239210|ref|XP_001525481.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450974|gb|EDK45230.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1163
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QKM++ + + I + + F+L H R++QK+I L S ++++
Sbjct: 414 GNYLVQKMIAYCNQSNLDMILDTL---QFNLFKISVNQHGTRALQKIIDSLSTSAQLNVL 470
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I D++ + VI K L + + +Y + + +ATH GC L
Sbjct: 471 IRGLKPHIIDLIKDLNGNHVIQKILNKYEPADCQFIYDSIIEDLYIVATHKHGCCVLQKC 530
Query: 170 INEMRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEE 227
+N + + I + F L D GNYV+Q+++ + L+ S ++ F +
Sbjct: 531 LNHVTPAQLNQFSLAILQYDNFKVLINDQFGNYVLQYLISINSLEVSFQVLQ----NFHQ 586
Query: 228 LSLL-----RCGSHLVEKY 241
++ + S++VEKY
Sbjct: 587 YGIMNLCNSKFSSNVVEKY 605
>gi|440300551|gb|ELP92998.1| pumilio, putative [Entamoeba invadens IP1]
Length = 427
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +F+ + L + YGC R +QK++ +L S C+ V
Sbjct: 158 GNYVVQKLLEYGPPKLIVDVFKQISGSIVRLSLNTYGC---RVIQKMLDVLPSS-CLQDV 213
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + VI K ++ + E + + + H GC +
Sbjct: 214 ADEMKSNVVLFIEDQNGNHVIQKFIDAIPEIGLGFIIKEIKEKVVDFSKHAYGCRVVQRL 273
Query: 170 INEMRG-PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
I + P G L++ + LS + GNYV+QH++ G+ I +KGK E
Sbjct: 274 IEKAAFLPIAGKLIENVWD----LSVNQYGNYVIQHLVQHGNNSQRVAIVKNIKGKLYEY 329
Query: 229 SLLRCGSHLVEKYQRPSIFTPCQHKYGNFVIQQALRV 265
++ + S++VEK R C+ K N + + R+
Sbjct: 330 AMKKYSSNVVEKCLR-----CCEEKEQNVFVDELFRM 361
>gi|219110179|ref|XP_002176841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411376|gb|EEC51304.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 80 LMTDGYGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMM------------FSKEAS 127
L+ H RS+QKL++L + V+ A D++ +
Sbjct: 75 LVNASLNLHGTRSVQKLVELCAQDE-HNQVVGANEESAADILTYSLAPAAARLCIDSHGN 133
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISS 187
VI + L L+ + ++ ++ A ++A H GC + ++ R L+ I
Sbjct: 134 HVIQRILLKLNYKHSKFVFDAVALSVGDVARHRHGCCVIQRCLDSQPTEARSHLVLRIVD 193
Query: 188 HAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE------------ELSLLRCGS 235
+ L +D GNYVVQ+VL + + + +C + G+ E L RC
Sbjct: 194 KSLELMQDAYGNYVVQYVLDVCSDQDVQAVCESVAGRVNLLAIQKFSSNVMEKCLERCSD 253
Query: 236 HLVEKY----QRPS-IFTPCQHKYGNFVIQQALRV---TKGFQMTE 273
+ E Y RP I +GN+V+Q+AL V T+ ++ E
Sbjct: 254 RIKEMYLDEMSRPERIRELMMDPFGNYVVQRALSVATHTQAIRLVE 299
>gi|15239174|ref|NP_199123.1| pumilio 13 [Arabidopsis thaliana]
gi|75171666|sp|Q9FMH4.1|PUM13_ARATH RecName: Full=Putative pumilio homolog 13; Short=APUM-13;
Short=AtPUM13
gi|9757836|dbj|BAB08273.1| unnamed protein product [Arabidopsis thaliana]
gi|332007526|gb|AED94909.1| pumilio 13 [Arabidopsis thaliana]
Length = 527
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 123 SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPR---RG 179
+ A VI+ C + L H ++A GC L ++ R P R
Sbjct: 333 NTNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQ 392
Query: 180 GLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVE 239
L+ + HA L + GNYVVQ+V+ L + ++ + + L + L+ + GSH+V+
Sbjct: 393 RLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQ 452
Query: 240 KYQR--------------PSIFTPCQHKYGNFVIQQALRVTK 267
K + I T +GN+VIQ A V+K
Sbjct: 453 KLLKLRGIDSKLIVVDLLRGIDTLLLDPFGNYVIQTAWFVSK 494
>gi|328767389|gb|EGF77439.1| hypothetical protein BATDEDRAFT_91666 [Batrachochytrium
dendrobatidis JAM81]
Length = 869
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 60/283 (21%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------AR 91
IV + GS F+Q+ L + +F+ + LMTD +G ++ A
Sbjct: 548 IVEFSGDQHGSRFIQQKLETCTNDEKQLVFDEIMPNALQLMTDVFGNYVIQKIFEYGSAA 607
Query: 92 SMQKLIKLLVGSPCISLVIS-----AAYRRFKDMMFSKEASSV------IIKCLETLDEQ 140
Q L +L+ GS + L + + F+ + ++A + ++KC++ D+
Sbjct: 608 QKQILAELMEGS-VLELSLQMYGCRVVQKAFEHVPIEQQARLIHELDGNVLKCVK--DQN 664
Query: 141 KNEVLYLA----AMNHFR-----------ELATHVRGCVSLNNFINEMRGPRRGGLLDLI 185
N V+ A + H + LATH GC + LL +
Sbjct: 665 GNHVIQKAIERVSAEHIKFIIDAFHGQVYALATHPYGCRVIQRIFEHCSEEETQPLLGEL 724
Query: 186 SSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQ 242
+A L +D GNYV+QH+L G + + +KG+ +S + S++VEK +
Sbjct: 725 HRYAISLIQDQYGNYVIQHILERGRPSDKLFVINKVKGQILTMSKHKFASNVVEKCVAFG 784
Query: 243 RP-------------------SIFTPCQHKYGNFVIQQALRVT 266
P ++FT + ++ N+V+Q+ L V
Sbjct: 785 SPADRQDIIDEVATTKSDGTTALFTMMKDQFANYVVQKMLDVA 827
>gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana]
Length = 330
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ E V + L YGC + + ++++L + + +
Sbjct: 41 GNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKEL 100
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + D + + VI KC+E L + + + + L+TH GC +
Sbjct: 101 DGSVMKCVHD----QNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRV 156
Query: 170 ---INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
I+++ R +++ I L++D GNYV+QH++ G +I + L G+
Sbjct: 157 LEHIDDIETQRI--IMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIV 214
Query: 227 ELSLLRCGSHLVEK 240
++S + S++VEK
Sbjct: 215 KMSQQKFASNVVEK 228
>gi|159112491|ref|XP_001706474.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434571|gb|EDO78800.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 652
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 27/239 (11%)
Query: 49 GGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISL 108
G+ QK++ D++ +I + FD+ + +G RS+QKL + + ++
Sbjct: 373 SGNYCFQKIIESSDASQRLRILLLIQDSLFDICQNLHG---TRSIQKLFERVSSDEEKAI 429
Query: 109 VIS--AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSL 166
+ A R ++ + + +C+ET + +Y + + TH GC +
Sbjct: 430 IAQQLGAGDRIIKLIVDINGNHCVQRCIETFAPKDCTFIYDQIIRELVLVGTHQHGCCII 489
Query: 167 NNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVL-----GLGDLKYSEKICSLL 221
++ +R ++ I +H L D GNYV Q+ L GL L ++ + +
Sbjct: 490 QRCLDLCSEAQRVQIVTAIKNHVMELIVDRFGNYVFQYSLEKANNGLCGLISADDLIRPI 549
Query: 222 KGKFEELSLLRCGSHLVEKYQR-----------------PSIFTPCQHKYGNFVIQQAL 263
G L + SH VEK + S + K+GN+V+Q+A
Sbjct: 550 LGHEGSLVNQKFSSHAVEKCLKYGSRRMRTLITENLMASSSFLSSAMDKFGNYVVQKAF 608
>gi|356550736|ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
chloroplastic-like [Glycine max]
Length = 952
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I L + + + R +D + + VI KC+E++ + +
Sbjct: 708 YGCRVIQKALEVIDLEQKAQLVHELDGNVMRCVRD----QNGNHVIQKCIESIPTKNIDF 763
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+ H GC + + + ++D I L++D GNYV Q
Sbjct: 764 IISAFRGQIALLSMHPYGCRVIQRVLEHCSNEVQCQFIVDEILESVFTLAQDQYGNYVTQ 823
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---------------------YQ 242
HVL G + +I L G +LS + S++VEK Q
Sbjct: 824 HVLERGKPQERSQIIHKLSGHIFQLSQHKFASNVVEKCLEYGDATDRQLLIAEIVGHDKQ 883
Query: 243 RPSIFTPCQHKYGNFVIQQALRV 265
++ T + ++ N+VIQ+ +
Sbjct: 884 NDNLLTMMKDQFANYVIQKVFEI 906
>gi|346327596|gb|EGX97192.1| Armadillo-type fold domain containing protein [Cordyceps militaris
CM01]
Length = 816
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 115/293 (39%), Gaps = 57/293 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
IV + GS F+Q L +S ++F + LM D +G +
Sbjct: 438 IVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQV 497
Query: 89 ----LARSMQ-KLIKLLVGSPCISLVI----------SAAYRRFKD-----MMFSKEASS 128
LA M+ K++ L V +V AA + D ++ + +
Sbjct: 498 QKKILAEKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAALTKELDPEILRVIRDQNGNH 557
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI K +E + Q + + A LA+H GC + + + ++ + +
Sbjct: 558 VIQKIIELVPRQYIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDIDKLEIMTELHAS 617
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
A+ L D GNYV QHV+ G + +K+ L+ + LS + S++VEK
Sbjct: 618 AQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIEHGTQQ 677
Query: 242 QR-----------PSIFTPCQ----HKYGNFVIQQALRVTKGFQMTERNIIQE 279
QR P +P Q +YGN+VIQ+ L +G E+ I+ E
Sbjct: 678 QRSAIRVQLTTVGPDGTSPLQLMMRDQYGNYVIQKLLGQLQG---AEKEILVE 727
>gi|255580219|ref|XP_002530940.1| pumilio, putative [Ricinus communis]
gi|223529499|gb|EEF31455.1| pumilio, putative [Ricinus communis]
Length = 1024
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ + + L YGC R +QK +++ VG + +
Sbjct: 736 GNYVIQKFFEHGTESQRTELANQLTAHVLPLSLQMYGC---RVIQKALEV-VGVDQQTEM 791
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
++ + + + VI KC+E + E + + + + L+TH GC +
Sbjct: 792 VAELDGSIMKCVRDQNGNHVIQKCIECVPEDRIQSIISSFYGQVVALSTHPYGCRVIQRV 851
Query: 170 INEMRG-PRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEEL 228
+ + ++D I L++D GNYV+QHVL G I L G+ ++
Sbjct: 852 LEHCESIDTQQIIMDEIMQSVCVLAQDQYGNYVIQHVLEHGKPHERSAIICKLAGQIVKM 911
Query: 229 SLLRCGSHLVEK 240
S + S++VEK
Sbjct: 912 SQQKFASNVVEK 923
>gi|308198245|ref|XP_001387179.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
gi|149389106|gb|EAZ63156.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
Length = 528
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 34 LAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYK--------IFEAVYKYPFDLMTDGY 85
L Q DI+ L K + G FLQK + ++ Y+ IF ++ Y ++L+ D +
Sbjct: 129 LVQLKSDILRLSKDQYGCRFLQKKI-DENLIPNYQTRLNNFEVIFAQIHPYLYELIIDPF 187
Query: 86 GCHL---------------------------------ARSMQKLIKLLVGSPCISLVISA 112
G +L R++QK+I L ++L+I
Sbjct: 188 GNYLIQKLIVYCNESNLNLILQILQYNLFQISINQHGTRALQKIIDNLNNQYQLNLLIKG 247
Query: 113 AYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE 172
+++ + VI K L + +Y + + +A+H GC L +N
Sbjct: 248 MKPYIIELIKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKCLNH 307
Query: 173 MRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKIC-SLLKGKFEELS 229
+ + I A F L D GNYV+Q+++ + + + KI + L+ L
Sbjct: 308 VTMTQLQEFSACILDFANFQLLINDQFGNYVLQYLISINSFEINYKIFQNFLQFGINNLC 367
Query: 230 LLRCGSHLVEKY 241
L+ S++VEK+
Sbjct: 368 NLKFSSNVVEKF 379
>gi|145510148|ref|XP_001441007.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408246|emb|CAK73610.1| unnamed protein product [Paramecium tetraurelia]
Length = 443
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 30 KNALLAQPDYDIVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL 89
K+ + ++ + V L K G+ +Q +L K+ + + L YGC
Sbjct: 141 KDLIFSRLEKGFVSLSKDVFGNYVIQNLLENGTQLQQQKMLIILQPHTQQLAFHQYGC-- 198
Query: 90 ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAA 149
R +Q+L++ +P ++ + + +D++ + + V+ K ++ ++ + +
Sbjct: 199 -RVLQRLLQNSHKTPEFKVLFDSIKGKVRDLVIDQHGNHVVQKLIQLMEGDVSLWVLDGV 257
Query: 150 MNHFRELATHVRGCVSLNNFIN--EMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
+L T+ GC + I+ R+ +L I ++ L GNY++Q +L
Sbjct: 258 EGQISKLVTNSFGCRIIQKAISISNNHAERQMSVLQEIMKISQELCTSQYGNYIIQQLLK 317
Query: 208 LGDLKYSEKICSLLKGKFEELSLLRCGSHLVE--------------------KYQRPSIF 247
G +I ++ K EE SL + GS++V+ + P +F
Sbjct: 318 DGPEVIQIEIQQIIMDKIEEYSLNKFGSNVVDCAIKCSNNKFKLKIMELLLSQKNHPVLF 377
Query: 248 TP-CQHKYGNFVIQQALR-----VTKGFQM---TERNIIQELGQSSFIQGI 289
++ YGN+V+Q L+ + K F + + ++QE+ QS F Q +
Sbjct: 378 VSLSKNAYGNYVVQNFLKFSDSEIQKEFYLKITNNQQLLQEIQQSQFGQYV 428
>gi|259147977|emb|CAY81226.1| Puf3p [Saccharomyces cerevisiae EC1118]
Length = 893
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
Y C R +QK ++ + + I LV+ + + M+ + + VI K +ET+ +K
Sbjct: 637 YAC---RVIQKALEYIDSNQRIELVLELSDSVLQ-MIKDQNGNHVIQKAIETIPNEKLPF 692
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQH 204
+ + H L+TH GC + + + +L+ + +L +D GNYV+Q+
Sbjct: 693 ILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQY 752
Query: 205 VLGLGDLKYSE------KICSLLKGKFEELSLLRCGSHLVEKY-------QRPSIFTP-- 249
VL E +I + E S + S++VEK Q+ SI +
Sbjct: 753 VLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFASNVVEKSILYGSKDQKDSIISKIL 812
Query: 250 -------------------CQHKYGNFVIQQALRVTKG 268
+ ++ N+VIQ+ + V++G
Sbjct: 813 PRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVSEG 850
>gi|297834954|ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
gi|297331199|gb|EFH61618.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 26/208 (12%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I + + I + + +D + + VI KC+E++ +
Sbjct: 717 YGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRD----QNGNHVIQKCIESMPAGRIGF 772
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+TH GC + + ++D I A L+ D GNYV Q
Sbjct: 773 VIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQ 832
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---------------------YQ 242
HVL G +I L G ++S + S++VEK +
Sbjct: 833 HVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEE 892
Query: 243 RPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ + ++ N+V+Q+ L ++K Q
Sbjct: 893 DNHLLAMMKDQFANYVVQKVLEISKDQQ 920
>gi|161138158|gb|ABX58011.1| pumilio-like protein 2 [Fasciola hepatica]
Length = 171
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
VI KC+E + + + + A L++H GC + + + +L+ +
Sbjct: 3 VIQKCIECVPPSELDFIIAAFRGQVFHLSSHPYGCRVIQRILEHCLTEQTRPILEELHKG 62
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ L KD GNYV+QHVL G + +I L G+ +LS + S+++EK
Sbjct: 63 VDHLVKDQYGNYVIQHVLERGLPEDKSRIIVSLLGRVAQLSAHKFASNVMEK 114
>gi|258570377|ref|XP_002543992.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904262|gb|EEP78663.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 877
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 57/283 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
IV + GS F+Q+ L +S ++F+ + LM D +G ++ + +
Sbjct: 503 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 562
Query: 94 ------QKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSV------IIKCLETLDEQK 141
Q+++ ++ + + ++ ++A+ V +IKC++ D+
Sbjct: 563 QKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAIVKELEHHVIKCVK--DQNG 620
Query: 142 NEVLYLAA-----------MNHFR----ELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
N V+ A +N F+ A H GC + + R +L +
Sbjct: 621 NHVIQKAIERVPQAHIQFIINDFKGQIQRWAVHSYGCRVIQRMLEHCDEEDREAILAELH 680
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK---YQR 243
+ L D GNYV+QHV+ G K ++ +++ S + S++VEK + R
Sbjct: 681 VCSGNLISDQFGNYVIQHVIENGKEKDRAQMIAVVISDLVTYSKHKFASNVVEKTIEFGR 740
Query: 244 PS-------IFTPCQHK-----------YGNFVIQQALRVTKG 268
S IFT + +GN+V+Q+ L+V KG
Sbjct: 741 NSDRLDILRIFTTLDERGDPLLDLMRDQFGNYVVQKVLQVLKG 783
>gi|410077699|ref|XP_003956431.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
gi|372463015|emb|CCF57296.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
Length = 703
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 50 GSLFLQKM---LSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCI 106
G+ +QK+ L+ + T + ++Y + F + + YG RS+QK+I + I
Sbjct: 181 GNYLIQKLCEYLTTDEKTF---LINSIYPHVFRISINQYG---TRSLQKIIDTVDNETQI 234
Query: 107 SLVISAAYRRFKD------MMFSKEASSVIIKCLETLDEQKNEVLYLAAM--NHFRELAT 158
L++ + F ++ + VI KC+ K + + A + N+ ++T
Sbjct: 235 DLIVKGFSQEFTSIDQVVTLINDLNGNHVIQKCIFKFPSSKFDFIINAIIEKNNIIAIST 294
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS---E 215
H GC L ++ + + I L D GNY++Q +L + +L + E
Sbjct: 295 HKHGCCVLQKLLSVCTLQQIFKISLKIIQFLSGLMNDQFGNYIIQFLLDIKELDFYFLIE 354
Query: 216 KICSLLKGKFEELSLLRCGSHLVEKY 241
+LL +LS L+ S+++EKY
Sbjct: 355 IFNTLLVNDICQLSCLKFSSNVIEKY 380
>gi|356533951|ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + +++ + +S + A + +D + + VI KC+E + + K +
Sbjct: 737 YGCRVIQKALEVVDVDQQGQMVSELNGAIMKCVRD----QNGNHVIQKCIECVPQDKIQF 792
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ + L+TH GC + + +++ I L++D GNYV+Q
Sbjct: 793 IVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEIMQSVSTLAQDQYGNYVIQ 852
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
H++ G I S L G+ ++S + S+++EK
Sbjct: 853 HIVEHGKPHERTTIISKLAGQIVKMSQQKFASNVIEK 889
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 83/208 (39%), Gaps = 43/208 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKI-FEAVYKYPFDLMTDGYGCHLARSMQKLIKL 99
+V L G +Q++L D T +I E + + L D YG ++ +Q +++
Sbjct: 801 VVALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEIMQSVSTLAQDQYGNYV---IQHIVEH 857
Query: 100 LVGSPC-ISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELAT 158
G P + +IS + M K AS+VI KCL ++ ++L
Sbjct: 858 --GKPHERTTIISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQIL------------- 902
Query: 159 HVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLS---KDPSGNYVVQHVLGLGDLKYSE 215
+NEM G S E L KDP GNYVVQ VL D + E
Sbjct: 903 -----------VNEMLG---------TSDENEPLQAMMKDPFGNYVVQKVLETCDDRSLE 942
Query: 216 KICSLLKGKFEELSLLRCGSHLVEKYQR 243
I S +K L G H+V + ++
Sbjct: 943 LILSRIKVHLNALKRYTYGKHIVSRVEK 970
>gi|213402511|ref|XP_002172028.1| meiotic coiled-coil protein [Schizosaccharomyces japonicus yFS275]
gi|212000075|gb|EEB05735.1| meiotic coiled-coil protein [Schizosaccharomyces japonicus yFS275]
Length = 670
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 33/227 (14%)
Query: 69 IFEAVYKYPFDLMTDGYGCHLAR----SMQKLIKLLVGSPCISLVISAAYRRFKDMMFSK 124
I E + + L TD +GCH+ + ++ + IKL + + S + ++ K
Sbjct: 403 IGETILGHALQLATDPFGCHVVQKALDNVTEDIKLAILDELFVHIGSTITHHYACHVWQK 462
Query: 125 EASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNN-FINEMRGPRRGGLLD 183
+C L + N+ L + E+A G + + N F N + +R + +
Sbjct: 463 LFEVRWSECGSNLMTRVNDAL----RGKWAEIALGENGSLVVQNMFENCVEEDKRECIEE 518
Query: 184 LISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKY-- 241
+IS + + +++ GN+V+QH+L G K +++ +LL K + S+ + S ++EK
Sbjct: 519 VIS-NLDTIARGQWGNWVIQHMLENGHPKDLDRVTTLLLAKAADYSVDQYASKVIEKAIK 577
Query: 242 ---------------------QRPSIFTPCQHKYGNFVIQQALRVTK 267
R + +YGN+++QQ L+V +
Sbjct: 578 IGSNNFIPRYLTQVTTTRVNRTRQPLVDIASDQYGNYLVQQILQVAQ 624
>gi|367003916|ref|XP_003686691.1| hypothetical protein TPHA_0H00470 [Tetrapisispora phaffii CBS 4417]
gi|357524993|emb|CCE64257.1| hypothetical protein TPHA_0H00470 [Tetrapisispora phaffii CBS 4417]
Length = 813
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+ + + +++Y + F + + YG RS+QK+I + I L+
Sbjct: 272 GNYLIQKLCDYFTTDQKTSLIKSIYPHVFQISINQYG---TRSLQKIIDTVENDAQIDLI 328
Query: 110 IS------AAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAM--NHFRELATHVR 161
I A+ + ++ + VI KC+ K + + A + N+ ++TH
Sbjct: 329 IRGFSRECASINQIVTLINDLNGNHVIQKCIFKFPTTKFDFIVDAIIHKNNIVLISTHKH 388
Query: 162 GCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYS--EKICS 219
GC L + L I + FL D GNY+VQ + + +L + +I +
Sbjct: 389 GCCVLQKLLGISTLQHIFKLSTKIIEYLHFLINDQFGNYIVQFLFDIEELDFYLLSEIYN 448
Query: 220 LLKGKFEELSLLRCGSHLVEKY 241
L G L+ + S+++EK+
Sbjct: 449 KLVGDICNLACSKFSSNVIEKF 470
>gi|30685690|ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana]
gi|313471415|sp|Q9LJX4.2|PUM5_ARATH RecName: Full=Pumilio homolog 5; Short=APUM-5; Short=AtPUM5
gi|332642831|gb|AEE76352.1| pumilio 5 [Arabidopsis thaliana]
Length = 961
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 105/285 (36%), Gaps = 56/285 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
+V + GS F+Q+ L +F V LMTD +G ++ +
Sbjct: 633 VVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPA 692
Query: 94 --QKLIKLLVGSPCISL--------VISAAY------------RRFKDMMF----SKEAS 127
++L+K L G +SL VI A R + + +
Sbjct: 693 QREELVKQLAGQ-MVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGN 751
Query: 128 SVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLIS 186
VI KC+E++ + + A L+TH GC + + ++D I
Sbjct: 752 HVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEIL 811
Query: 187 SHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK------ 240
A L+ D GNYV QHVL G +I L G ++S + S++VEK
Sbjct: 812 ESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHAD 871
Query: 241 ---------------YQRPSIFTPCQHKYGNFVIQQALRVTKGFQ 270
+ + + ++ N+V+Q+ L ++K Q
Sbjct: 872 STEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQ 916
>gi|443896502|dbj|GAC73846.1| translational repressor Pumilio/PUF3 [Pseudozyma antarctica T-34]
Length = 944
Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L + +F+ V + LMTD +G +
Sbjct: 597 VVEFSGDQHGSRFIQEKLDSASAEEKKTLFDEVLPHARQLMTDVFGNYVIQKMLEHGDDE 656
Query: 89 ----LARSMQ-KLIKLLVGSPCISLVISA-----AYRRFK----------DMMFSKEASS 128
LAR M+ ++ L +G+ +V A +R K + + A+
Sbjct: 657 QRAVLAREMEGNVLSLSLGTYGCRVVQKAFDYIAPEQREKLAKELDGHIMQCVRDQNANH 716
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ K +E +D + + A + H LA+H C L + LLD +
Sbjct: 717 VVQKVIERVDAGEVAFIPEAFVGHVAGLASHCYSCRVLQRAFEHCTEAQARPLLDELHHE 776
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPS 245
A L + GNYV+Q VL G ++ + ++G LS + S+++E+ R S
Sbjct: 777 AYALMQHQYGNYVIQWVLQRGQPNDRAQVIAKIRGNVLTLSRHKFASNVIEEVIRTS 833
>gi|260949221|ref|XP_002618907.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
gi|238846479|gb|EEQ35943.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
Length = 752
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK++ D T I E + F+L + H R++QK+I + +SL+
Sbjct: 188 GNYLIQKLIDYCDETNLNLILETLQ---FNLFSISINQHGTRALQKVIDRMSSDYQLSLL 244
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
I +++ + VI K L + + +Y + + +ATH GC L
Sbjct: 245 IKGLKPYIIELIKDLNGNHVIQKILNKYSPENCQFIYDSIIQDLLVVATHKHGCCVLQKC 304
Query: 170 INEMRGPRRGGLLDLISSHAEF--LSKDPSGNYVVQHVLGLGDLKYSEKICS-LLKGKFE 226
+N + + I + F L D GNYV+Q+++ + + + ++ S ++
Sbjct: 305 LNHVNPSQLMQFSTNILKYNVFMKLVNDQFGNYVLQYLISIDSIDINGQLYSNFVRFGVS 364
Query: 227 ELSLLRCGSHLVEKYQR 243
+L + S++VEK R
Sbjct: 365 DLCKSKFSSNVVEKLMR 381
>gi|413921572|gb|AFW61504.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 986
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLV---ISAAYRRFKDMMFSKEASSVIIKCLETLDEQK 141
YGC R +QK ++++ I LV R +D + + VI KC+E + +
Sbjct: 742 YGC---RVIQKALEVMELDQKIDLVHELDGHVMRCVRD----QNGNHVIQKCIECVPTEH 794
Query: 142 NEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNY 200
+ A L+ H GC + + G + ++D I A L++D GNY
Sbjct: 795 IGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQCIVDEILQSACVLAQDQYGNY 854
Query: 201 VVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
V QHVL G+ +I L G+ +S + S+++EK
Sbjct: 855 VTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIEK 894
>gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC + + ++I + + I + + +D + + VI KC+E++ +
Sbjct: 714 YGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRD----QNGNHVIQKCIESMPAGRIGF 769
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGG-LLDLISSHAEFLSKDPSGNYVVQ 203
+ A L+TH GC + + ++D I A L+ D GNYV Q
Sbjct: 770 VIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQ 829
Query: 204 HVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
HVL G +I L G ++S + S++VEK
Sbjct: 830 HVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEK 866
>gi|400597485|gb|EJP65218.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 809
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 108/277 (38%), Gaps = 54/277 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L +S ++F + LM D +G +
Sbjct: 431 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQV 490
Query: 89 ----LARSMQ-KLIKLLVGSPCISLVISAAYRRF--KDMMFSKEASSVII---------- 131
LA M+ K++ L V +V A + +KE S II
Sbjct: 491 QKKILAEKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELSPDIIRVIRDQNGNH 550
Query: 132 ---KCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
K +E + Q + + A LA+H GC + + + ++ + +
Sbjct: 551 VIQKIIELVPRQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTETDKLEIMTELHAS 610
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
A+ L D GNYV QHV+ G + +K+ L+ + LS + S++VEK
Sbjct: 611 AQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIEHGTPA 670
Query: 242 QRPSI-----------FTPCQ----HKYGNFVIQQAL 263
QR +I +P Q +YGN+VIQ+ L
Sbjct: 671 QRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQKLL 707
>gi|389738629|gb|EIM79826.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 448
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 194 KDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEKYQRPSIFTP-CQH 252
+DP GNYVVQ++L L D ++S+ + G LS+ + S+++EK R + +
Sbjct: 202 EDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCIRVAEHEKLLRD 261
Query: 253 KYGNFVIQQALRVTKGFQ 270
YGN+ +Q AL + Q
Sbjct: 262 SYGNYCVQTALDYAEPAQ 279
>gi|213402367|ref|XP_002171956.1| PUF3 [Schizosaccharomyces japonicus yFS275]
gi|212000003|gb|EEB05663.1| PUF3 [Schizosaccharomyces japonicus yFS275]
Length = 840
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 31/207 (14%)
Query: 85 YGCHLARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEV 144
YGC +A+ + I L I + + KD + + VI K +E + +
Sbjct: 587 YGCRVAQKALEHIPLNRQVELIQELDGDVLKCVKD----QNGNHVIQKAIECIPYGHLQF 642
Query: 145 LYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFL--SKDPSGNYVV 202
+ A M + L++H GC + I R L L H + L ++D GNYV+
Sbjct: 643 VVDAVMPNVYNLSSHPYGCRVIQRIIEHFADARSSVYLQL---HTQILHLAQDQYGNYVI 699
Query: 203 QHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------YQRPSIFTP------ 249
QH++ G +I ++ G LS + S++VE+ R F
Sbjct: 700 QHLMKKGSPSEQREIVEVVLGNVLHLSRHKFASNVVERCISYCSDTDRERFFNSLLGENE 759
Query: 250 ---------CQHKYGNFVIQQALRVTK 267
+ KY N+VIQ+ + V+K
Sbjct: 760 DGDTYLLNLIKDKYANYVIQKLIDVSK 786
>gi|340057837|emb|CCC52188.1| putative RNA-binding regulatory protein (pumilio family)
[Trypanosoma vivax Y486]
Length = 834
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 46/240 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
IV L K + GS +Q +L+ D IF ++ DL+TD +G ++ +QKL+ L
Sbjct: 319 IVSLCKEQDGSRLVQCLLN--DPKNVNLIFNELFPRVHDLITDVFGNYV---LQKLLDTL 373
Query: 101 V--GSPCISLV--ISAAYRRFK---------------------------------DMMFS 123
G C L+ +S + + D +F
Sbjct: 374 PSEGDMCQQLIEQVSGKLKEYSFQMYGCRVVQKILEKALPSKRAEVFIELKDSLIDCIFD 433
Query: 124 KEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINE---MRGPRRGG 180
+ A+ V K +E + E K E+L + M +EL+ H GC L + G
Sbjct: 434 QNANHVAQKLIEVIPE-KMELLMDSIMPQLKELSRHPYGCRVLQCIFEKCSTTPGVNIRP 492
Query: 181 LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+L+ + H D GNYVVQH + ++ S L LS + S++ EK
Sbjct: 493 VLEAVLDHIHEYVMDQYGNYVVQHAILNSPEDIRQRFVSQLTPHVYALSCSKFASNVAEK 552
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 94/258 (36%), Gaps = 58/258 (22%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
+V + + GS F+Q+ L S +F + + + LMTD +G ++ +
Sbjct: 847 MVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 906
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS R + +
Sbjct: 907 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNG 966
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 967 NHVVQKCIECVQPQAFQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELH 1026
Query: 187 SHAEFLS------------------------KDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
H E L KD GNYV+QHVL G + KI + ++
Sbjct: 1027 QHFEQLGQKYQGVSLEMTPQTYYTVSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVR 1086
Query: 223 GKFEELSLLRCGSHLVEK 240
GK LS + S++VEK
Sbjct: 1087 GKVLALSQHKFASNVVEK 1104
>gi|167392498|ref|XP_001740184.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165895862|gb|EDR23451.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 437
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK+L + +FE + L YGC R +QK++++L S + ++
Sbjct: 166 GNYVIQKLLEHGTKKHVHLLFEKLQGNVVKLSLHMYGC---RVIQKILEVL-SSEEVRII 221
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNF 169
+ + + + VI K ++ E + E + H GC +
Sbjct: 222 SAEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQRL 281
Query: 170 INEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELS 229
I + + D + + LS + GNYV+QH++ G + KI + +KGK E S
Sbjct: 282 IEKNSQNCVKRVTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRIKIVNNIKGKLYEYS 341
Query: 230 LLRCGSHLVEK 240
+ + S++VEK
Sbjct: 342 MKKYSSNVVEK 352
>gi|167389199|ref|XP_001738858.1| pumilio [Entamoeba dispar SAW760]
gi|165897686|gb|EDR24768.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 440
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 41/239 (17%)
Query: 38 DYDIVLLGKTEGGSLFLQKMLS-GKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKL 96
+Y + L K + GS +Q L+ K+ IT ++F+++ ++LM D +G ++ +QK
Sbjct: 124 NYTVTDLCKDQQGSRRIQTFLTTAKEFEIT-ELFDSIKGDLYELMNDLFGNYV---VQKF 179
Query: 97 IKL-----------------------LVGSPCISLVISAAYRRFKDMMFSKEASS----- 128
I+L + G I VI + + +F++ S
Sbjct: 180 IELGNDKLRQFVHSIIRGRVVELSKHMYGCRVIQKVIERSNTNENERIFNEIEKSIIELI 239
Query: 129 -------VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGL 181
VI K +E E ++LY A + + H GC + I + +
Sbjct: 240 EDQNGNHVIQKIIENYWECIEKILY-ALQGQIEKYSGHGFGCRVMQRIIEKRFDNFNNQI 298
Query: 182 LDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
+ + LS + GNYV+QH+L G+ E I + ++ F E SLL+ S+++EK
Sbjct: 299 FQELQGNIIVLSMNQFGNYVIQHLLEFGNDIIREAIINEVEHVFFESSLLKFSSNVMEK 357
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 94/258 (36%), Gaps = 58/258 (22%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSM------- 93
+V + + GS F+Q+ L +F + + + LMTD +G ++ +
Sbjct: 855 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 914
Query: 94 QKLI-----------------------KLLVGSPCISLVISAAYRRFKDMMF----SKEA 126
QKL K L VIS R + +
Sbjct: 915 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNG 974
Query: 127 SSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLIS 186
+ V+ KC+E + Q + + A L+TH GC + + + +L+ +
Sbjct: 975 NHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELH 1034
Query: 187 SHAEFLS------------------------KDPSGNYVVQHVLGLGDLKYSEKICSLLK 222
H+E L KD GNYV+QHVL G + KI + ++
Sbjct: 1035 QHSEQLGQKYQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVR 1094
Query: 223 GKFEELSLLRCGSHLVEK 240
GK LS + S++VEK
Sbjct: 1095 GKVLVLSQHKFASNVVEK 1112
>gi|68476406|ref|XP_717664.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
Length = 783
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 104/261 (39%), Gaps = 64/261 (24%)
Query: 41 IVLLGKTEGGSLFLQK-MLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHL---------- 89
I+ L K + G FLQ+ +++ ++T+ IF +Y +LM D +G +L
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATL---IFNEIYFKAVELMIDPFGNYLIQKLFTMINL 504
Query: 90 -----------------------ARSMQKLIKLLVGSPCISLVISAAYRRFKDMMFSKEA 126
RS+QKLI ++ + I ++ Y +
Sbjct: 505 EQRLVLINQCSNELFRIALDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNG 564
Query: 127 SSVIIKCLETLD------------------EQKNEVLYLAAMNHFRELATHVRGCVSLNN 168
+ V+ K L + + +N+ ++ + +A H GC L
Sbjct: 565 NHVVQKILTKFNTISSDSNSSDSNRDGVQHQNQNQFIFDIIQANLLYIACHRHGCCVLQR 624
Query: 169 FINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGL----GDLKYSEK-----ICS 219
++ + L I+ H LS DP GNYVVQ+VL GD + ++ I
Sbjct: 625 CLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDIIIQ 684
Query: 220 LLKGKFEELSLLRCGSHLVEK 240
+K F +LSL + GS+++EK
Sbjct: 685 EIKSNFIQLSLHKFGSNVIEK 705
>gi|71656275|ref|XP_816687.1| pumilio/PUF RNA binding protein 9 [Trypanosoma cruzi strain CL
Brener]
gi|70881832|gb|EAN94836.1| pumilio/PUF RNA binding protein 9, putative [Trypanosoma cruzi]
Length = 535
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 99/254 (38%), Gaps = 51/254 (20%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMT---DGYGCHLARSMQKLI 97
+ L EG S+ L M S I+ + E + D+ T D +GCH+ R++ +
Sbjct: 226 VELACAVEGRSMLLAAMRSQDAMVISTMVNEIIA----DVETVALDNHGCHVLRALMDYM 281
Query: 98 K-----LLVGSPCISLV-----ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYL 147
LLV S +LV +S RR +F K +I ++ + YL
Sbjct: 282 DAEKTALLVSSFNETLVLNLCTVSQYTRRILQALFEKP----LIDLQPIVNVLASNAQYL 337
Query: 148 AAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLG 207
AA GC+SL ++ L+ + +S DP GNYVVQ +
Sbjct: 338 AATQQ---------GCISLMRVFELCNAEQKAQLMAPLVPLFTHISLDPFGNYVVQCAIE 388
Query: 208 LGDLKYSEK-ICSLLKGKFEELSLLRCGSHLVEKYQR-----PS---------IFTPC-- 250
+ + + S G+ +S + S+ VEK + P+ IF P
Sbjct: 389 RSEKTVAAQYTVSCFAGELLNMSCNKYASNAVEKIIKVCGDVPAVRRLLMDELIFNPAAL 448
Query: 251 ----QHKYGNFVIQ 260
Q +GNFV+Q
Sbjct: 449 LQMVQDSFGNFVVQ 462
>gi|22330960|ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4
gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana]
Length = 1003
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
Query: 50 GSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLLVGSPCISLV 109
G+ +QK + ++ E V + L YGC + + ++++L + + +
Sbjct: 714 GNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKEL 773
Query: 110 ISAAYRRFKDMMFSKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLN-- 167
+ + D + + VI KC+E L + + + + L+TH GC +
Sbjct: 774 DGSVMKCVHD----QNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRV 829
Query: 168 -NFINEMRGPRRGGLLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFE 226
I+++ R +++ I L++D GNYV+QH++ G +I + L G+
Sbjct: 830 LEHIDDIETQRI--IMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIV 887
Query: 227 ELSLLRCGSHLVEK 240
++S + S++VEK
Sbjct: 888 KMSQQKFASNVVEK 901
>gi|322707325|gb|EFY98904.1| hypothetical protein MAA_06043 [Metarhizium anisopliae ARSEF 23]
Length = 852
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 107/277 (38%), Gaps = 54/277 (19%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCH------------ 88
+V + GS F+Q+ L +S ++F + LM D +G +
Sbjct: 461 LVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQV 520
Query: 89 ----LARSMQ-KLIKLLVGSPCISLVISAAYRRF--KDMMFSKE-------------ASS 128
LA M+ K++ L V +V A + +KE +
Sbjct: 521 QKKVLAEKMKGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELEPEILRVIRDQNGNH 580
Query: 129 VIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGLLDLISSH 188
V+ K +E + Q + + A LA+H GC + + + ++ + +
Sbjct: 581 VVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDKMEIMMELHAS 640
Query: 189 AEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK-------Y 241
A+ L D GNYV QHV+ G + ++ L+ + LS + S++VEK
Sbjct: 641 AQILITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQLLTLSKHKFASNVVEKCIEHGTAE 700
Query: 242 QRPSI-----------FTPCQH----KYGNFVIQQAL 263
QR SI +P Q +YGN+VIQ+ L
Sbjct: 701 QRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLL 737
>gi|70924044|ref|XP_734934.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508134|emb|CAH81823.1| hypothetical protein PC000011.05.0 [Plasmodium chabaudi chabaudi]
Length = 173
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 32/132 (24%)
Query: 181 LLDLISSHAEFLSKDPSGNYVVQHVLGLGDLKYSEKICSLLKGKFEELSLLRCGSHLVEK 240
L++ ISS+ L +D GNYVVQ++L +G+ K + +I L E+ ++ + S+++EK
Sbjct: 13 LVNKISSNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEK 72
Query: 241 YQRPSIFTPCQH--------------------KYGNFVIQQALRVTKGFQMTERNIIQEL 280
T C+ KYGN+VIQ+AL V ++T+
Sbjct: 73 CLTIGT-TKCRKMMINGLLKKGKNILKNVILDKYGNYVIQRALSVAPEPELTK------- 124
Query: 281 GQSSFIQGIVPF 292
++GI P+
Sbjct: 125 ----LVEGIKPY 132
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 98/263 (37%), Gaps = 68/263 (25%)
Query: 41 IVLLGKTEGGSLFLQKMLSGKDSTITYKIFEAVYKYPFDLMTDGYGCHLARSMQKLIKLL 100
+V + + GS F+Q+ L +F + + + LMTD +G ++ +QK +
Sbjct: 840 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYV---IQKFFEF- 895
Query: 101 VGSPCISLV----------------------------ISAAYRRFKDMMF---------- 122
GSP L IS+ + D++
Sbjct: 896 -GSPDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVIGDIVRELDGHVLKCV 954
Query: 123 -SKEASSVIIKCLETLDEQKNEVLYLAAMNHFRELATHVRGCVSLNNFINEMRGPRRGGL 181
+ + V+ KC+E + Q + + A L+TH GC + + + +
Sbjct: 955 KDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1014
Query: 182 LDLISSHAEFLS------------------------KDPSGNYVVQHVLGLGDLKYSEKI 217
L+ + H+E L KD GNYV+QHVL G + KI
Sbjct: 1015 LEELHQHSEQLGQKYQAVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKI 1074
Query: 218 CSLLKGKFEELSLLRCGSHLVEK 240
+ ++GK LS + S++VEK
Sbjct: 1075 VAEVRGKVLALSQHKFASNVVEK 1097
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,633,971,384
Number of Sequences: 23463169
Number of extensions: 187712751
Number of successful extensions: 407250
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 296
Number of HSP's that attempted gapping in prelim test: 400440
Number of HSP's gapped (non-prelim): 4884
length of query: 304
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 162
effective length of database: 9,027,425,369
effective search space: 1462442909778
effective search space used: 1462442909778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)