BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044800
MKPNMAKTSQDFSSKRHFHWTKKVGTDDDDHHHHAHDQAPTFKAPANTTEEEKNVNTNTK
PFHQASMQTPKKKLPAVAVARLRTVLSTFGKHRSNLPLGLGPRVTGTLFGSKRGHVHFAF
QKDPNSPPAFLVELATPISGLVREMASGLVRIALECDKEKEDEKKAVRLLEEPMWRTYCN
GKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGTGDEAEANADGEIMYMRAKFERIVG
SRDSEAFYMMNPDSNGTPELSVYLLRV

High Scoring Gene Products

Symbol, full name Information P value
AT5G23100 protein from Arabidopsis thaliana 1.8e-69
AT3G25640 protein from Arabidopsis thaliana 8.8e-59
MIZ1
AT2G41660
protein from Arabidopsis thaliana 1.1e-41
AT2G21990 protein from Arabidopsis thaliana 1.5e-35
AT4G39610 protein from Arabidopsis thaliana 2.4e-35
AT5G06990 protein from Arabidopsis thaliana 6.5e-35
AT2G37880 protein from Arabidopsis thaliana 5.2e-33
AT5G42680 protein from Arabidopsis thaliana 8.5e-33
AT1G76610 protein from Arabidopsis thaliana 1.8e-30
AT1G21050 protein from Arabidopsis thaliana 6.4e-28
AT5G65340 protein from Arabidopsis thaliana 1.1e-25
AT2G22460 protein from Arabidopsis thaliana 1.6e-24

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044800
        (267 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2178312 - symbol:AT5G23100 "AT5G23100" species...   704  1.8e-69   1
TAIR|locus:2102360 - symbol:AT3G25640 "AT3G25640" species...   563  8.8e-59   2
TAIR|locus:2062647 - symbol:MIZ1 "AT2G41660" species:3702...   442  1.1e-41   1
TAIR|locus:2052541 - symbol:AT2G21990 "AT2G21990" species...   384  1.5e-35   1
TAIR|locus:2122546 - symbol:AT4G39610 "AT4G39610" species...   382  2.4e-35   1
TAIR|locus:2169454 - symbol:AT5G06990 "AT5G06990" species...   378  6.5e-35   1
TAIR|locus:2065609 - symbol:AT2G37880 "AT2G37880" species...   360  5.2e-33   1
TAIR|locus:2165477 - symbol:AT5G42680 "AT5G42680" species...   358  8.5e-33   1
TAIR|locus:2011766 - symbol:AT1G76610 "AT1G76610" species...   336  1.8e-30   1
TAIR|locus:2199577 - symbol:AT1G21050 "AT1G21050" species...   312  6.4e-28   1
TAIR|locus:2168257 - symbol:AT5G65340 "AT5G65340" species...   291  1.1e-25   1
TAIR|locus:2041238 - symbol:AT2G22460 "AT2G22460" species...   280  1.6e-24   1


>TAIR|locus:2178312 [details] [associations]
            symbol:AT5G23100 "AT5G23100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB006708
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 eggNOG:NOG318006 EMBL:BT010427 EMBL:AK221794
            IPI:IPI00544891 RefSeq:NP_197701.1 UniGene:At.31025
            EnsemblPlants:AT5G23100.1 GeneID:832374 KEGG:ath:AT5G23100
            TAIR:At5g23100 InParanoid:Q9FN45 OMA:VGSDEND PhylomeDB:Q9FN45
            ProtClustDB:CLSN2916210 Genevestigator:Q9FN45 Uniprot:Q9FN45
        Length = 277

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 160/286 (55%), Positives = 185/286 (64%)

Query:     9 SQDFSSKRH--FHWTKKVGTXXXXXXXXXXXQAPTFKAPAXXXXXXXXXXXXXXPFHQAS 66
             ++DF+SKRH  FHWT+KVG+             P    P                   ++
Sbjct:     2 AKDFASKRHNSFHWTRKVGSDENDDVSS---HKPL---PHHNNTKPSSSSSSSS----SN 51

Query:    67 MQTPKKKLPAVAVARLRTVLSTFGKHR-SNLPLGLGPRVTGTLFGSKRGHVHFAFQKDPN 125
             + T KKKL + AV+RLR+V++T  + R  N   GLG RV GTLFGS+RGHVHF+ QKDPN
Sbjct:    52 VITHKKKLQSFAVSRLRSVIATLSRARPGNQNSGLGSRVVGTLFGSRRGHVHFSIQKDPN 111

Query:   126 SPPAFLVELATPISGLVREMASGLVRIALX---------------------XXXXXXXXX 164
             SPPAFL+ELATPISGLV+EMASGLVRIAL                               
Sbjct:   112 SPPAFLIELATPISGLVKEMASGLVRIALECDKGKEEEEGEEKNGTLRHGGGDKTKTTTT 171

Query:   165 XAV--RLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGTGD-EAE 221
              AV  RL+EEPMWRTYCNGKKCGFATRRECG KE KVLKA+E +SMGAGVLP T +    
Sbjct:   172 AAVSRRLVEEPMWRTYCNGKKCGFATRRECGEKEKKVLKALEMVSMGAGVLPETEEIGGG 231

Query:   222 ANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLRV 267
                 G+IMYMRAKFERIVGSRDSEAFYMMNPDSNG PELS+YLLR+
Sbjct:   232 GGGGGDIMYMRAKFERIVGSRDSEAFYMMNPDSNGAPELSIYLLRI 277


>TAIR|locus:2102360 [details] [associations]
            symbol:AT3G25640 "AT3G25640" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] GO:GO:0009506 EMBL:CP002686 InterPro:IPR006460
            Pfam:PF04759 TIGRFAMs:TIGR01570 EMBL:BT002833 EMBL:BT015122
            IPI:IPI00516785 RefSeq:NP_189192.1 UniGene:At.37346 PRIDE:Q84WS4
            EnsemblPlants:AT3G25640.1 GeneID:822151 KEGG:ath:AT3G25640
            eggNOG:NOG318006 OMA:LETAAYK ProtClustDB:CLSN2915434
            ArrayExpress:Q84WS4 Genevestigator:Q84WS4 Uniprot:Q84WS4
        Length = 267

 Score = 563 (203.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
 Identities = 116/177 (65%), Positives = 131/177 (74%)

Query:    99 GLGPRVTGTLFGSKRGHVHFAFQKDPNSPPAFLVELATPISGLVREMASGLVRIALXXXX 158
             GLG RV GTLFG++RGHV+FA Q DP   PA L++L TP S LVREMASGLVRIAL    
Sbjct:    93 GLGFRVVGTLFGNRRGHVYFAVQDDPTRLPAVLIQLPTPTSVLVREMASGLVRIALETAA 152

Query:   159 XXXXXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGT-- 216
                      +LLEE  WRTYCNGKKCG+A R+ECG  EWKVLKAV PI+MGAGVLP T  
Sbjct:   153 YKTDSKK--KLLEESTWRTYCNGKKCGYAARKECGEAEWKVLKAVGPITMGAGVLPATTT 210

Query:   217 -----GDEAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPD-SNGTPELSVYLLRV 267
                  G+ A  +  GE+MYMRA+FER+VGSRDSEAFYMMNPD S+G PELSVY LRV
Sbjct:   211 TVDEEGNGAVGSEKGELMYMRARFERVVGSRDSEAFYMMNPDVSSGGPELSVYFLRV 267

 Score = 58 (25.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query:     1 MKPNMAKTSQD--FS-SKRHFHWTKK 23
             MK  +A TS D  FS SKR+F+W KK
Sbjct:     1 MKSILANTSLDSSFSLSKRYFNWKKK 26


>TAIR|locus:2062647 [details] [associations]
            symbol:MIZ1 "AT2G41660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0032541
            "cortical endoplasmic reticulum" evidence=IDA] [GO:0009658
            "chloroplast organization" evidence=IMP] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC002510 GO:GO:0009658 EMBL:AF345340
            EMBL:BT026058 EMBL:AK227967 IPI:IPI00522963 PIR:T00822
            RefSeq:NP_565953.1 UniGene:At.12407 PaxDb:O22227 PRIDE:O22227
            EnsemblPlants:AT2G41660.1 GeneID:818764 KEGG:ath:AT2G41660
            TAIR:At2g41660 eggNOG:NOG286298 HOGENOM:HOG000238116
            InParanoid:O22227 OMA:LRSFINI PhylomeDB:O22227
            ProtClustDB:CLSN2917310 ArrayExpress:O22227 Genevestigator:O22227
            InterPro:IPR006460 Pfam:PF04759 TIGRFAMs:TIGR01570 Uniprot:O22227
        Length = 297

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 91/176 (51%), Positives = 116/176 (65%)

Query:   100 LGPRVTGTLFGSKRGHVHFAFQKDPNSPPAFLVELATPISGLVREMASGLVRIALXXXXX 159
             LG RVTGTL+G KRGHV F+ Q +  S P  L++LA   + LV+EM+SGLVRIAL     
Sbjct:   125 LGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKR 184

Query:   160 XXXXXXAVRLLEEPMWRTYCNGKKCGFATRR--ECGAKEWKVLKAVEPISMGAGVLPG-- 215
                     +L +EP W  YCNG+KCG+A  R   C   +W+VL  V  +++GAGV+P   
Sbjct:   185 HRS---GTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPK 241

Query:   216 TGDEAEANADG----EIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLRV 267
             T D+      G    E++YMR KFER+VGSRDSEAFYMMNPD NG PELS++LLR+
Sbjct:   242 TIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLRI 297


>TAIR|locus:2052541 [details] [associations]
            symbol:AT2G21990 "AT2G21990" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007019
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 EMBL:AY219047 EMBL:AY649268 IPI:IPI00547263
            PIR:F84607 RefSeq:NP_179790.1 UniGene:At.39498 PaxDb:Q9SJ00
            PRIDE:Q9SJ00 EnsemblPlants:AT2G21990.1 GeneID:816735
            KEGG:ath:AT2G21990 TAIR:At2g21990 eggNOG:NOG244385
            InParanoid:Q9SJ00 OMA:DSEMAYM PhylomeDB:Q9SJ00
            ProtClustDB:CLSN2683722 ArrayExpress:Q9SJ00 Genevestigator:Q9SJ00
            Uniprot:Q9SJ00
        Length = 252

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 77/177 (43%), Positives = 113/177 (63%)

Query:    91 KHRSNLPLGLGPRVTGTLFGSKRGHVHFAFQKDPNSPPAFLVELATPISGLVREMASGLV 150
             +HRS      G RVTGTLFG ++G V  + Q+ P   P+ +VELA     L +E++ G+V
Sbjct:    83 QHRSG---SSGSRVTGTLFGYRKGRVSLSIQESPRCLPSLVVELAMQTMVLQKELSGGMV 139

Query:   151 RIALXXXXXXXXXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGA 210
             RIAL            +++++EP+W  + NGKK G+  +R+   ++  V++ + P+SMGA
Sbjct:   140 RIALETEKRGDKEK--IKIMDEPLWTMFSNGKKTGYGVKRDATEEDLNVMELLRPVSMGA 197

Query:   211 GVLPGTGDEAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLRV 267
             GVLPG   E E   D E+ YMRA FER+VGS+DSE FYM++P+ N  PELS++ +RV
Sbjct:   198 GVLPGN-TEFEG-PDSEMAYMRAYFERVVGSKDSETFYMLSPEGNNGPELSIFFVRV 252


>TAIR|locus:2122546 [details] [associations]
            symbol:AT4G39610 "AT4G39610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 EMBL:AL161595
            EMBL:AL078620 HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 ProtClustDB:CLSN2683722 EMBL:BT005270
            EMBL:AK118419 IPI:IPI00523208 PIR:T09377 RefSeq:NP_195671.1
            UniGene:At.31080 EnsemblPlants:AT4G39610.1 GeneID:830115
            KEGG:ath:AT4G39610 TAIR:At4g39610 InParanoid:Q9SV97 OMA:HNTSRIT
            PhylomeDB:Q9SV97 ArrayExpress:Q9SV97 Genevestigator:Q9SV97
            Uniprot:Q9SV97
        Length = 264

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 75/171 (43%), Positives = 110/171 (64%)

Query:   103 RVTGTLFGSKRGHVHFAFQKDPNSPPAFLVELATPISGLVREMASGLVRIALXXXXX--- 159
             R+TGTLFG ++G V  + Q++P   P+ +VELA   + L +E+++G+VRIAL        
Sbjct:    96 RITGTLFGYRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRA 155

Query:   160 ---XXXXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGT 216
                         +LEEP+W  YC G+K G+  +RE   ++  V++ + P+SMGAGVLPG 
Sbjct:   156 DNNNSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLPGN 215

Query:   217 GDEAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLRV 267
               E+E   DGE+ YMRA FER++GS+DSE FYM++P+ N  PELS + +RV
Sbjct:   216 S-ESEG-PDGEMAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVRV 264


>TAIR|locus:2169454 [details] [associations]
            symbol:AT5G06990 "AT5G06990" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB010697
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 EMBL:DQ132723 IPI:IPI00539149 RefSeq:NP_196316.1
            UniGene:At.54758 EnsemblPlants:AT5G06990.1 GeneID:830590
            KEGG:ath:AT5G06990 TAIR:At5g06990 eggNOG:NOG297236
            InParanoid:Q9FL47 OMA:AGDLAYM PhylomeDB:Q9FL47
            ProtClustDB:CLSN2713897 Genevestigator:Q9FL47 Uniprot:Q9FL47
        Length = 261

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 77/175 (44%), Positives = 112/175 (64%)

Query:   101 GPRVTGTLFGSKRGHVHFAFQKDPNSPPAFLVELATPISGLVREMASGLVRIALXXXXXX 160
             G RVTGTLFG ++  V+ A Q++P S P  L+ELA P   L++++  GLVRIAL      
Sbjct:    90 GTRVTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGKLLQDLGVGLVRIALECEKKP 149

Query:   161 XXXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLP-GTGDE 219
                    ++++EP+W  YCNGKK G+  +R+   ++  V++ +  +SMGAGVLP  +G  
Sbjct:   150 SEKT---KIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLHAVSMGAGVLPVSSGAI 206

Query:   220 AEANA-------DGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLRV 267
              E +        +G++ YMRA FER++GSRDSE +YMMNPD N  PELS++ +RV
Sbjct:   207 TEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNSGPELSIFFVRV 261


>TAIR|locus:2065609 [details] [associations]
            symbol:AT2G37880 "AT2G37880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 EMBL:DQ446607 IPI:IPI00540938 PIR:C84798
            RefSeq:NP_565873.1 UniGene:At.37363 PRIDE:Q1PEW0
            EnsemblPlants:AT2G37880.1 GeneID:818364 KEGG:ath:AT2G37880
            TAIR:At2g37880 OMA:MYMRANY PhylomeDB:Q1PEW0 ProtClustDB:CLSN2688768
            Genevestigator:Q1PEW0 Uniprot:Q1PEW0
        Length = 247

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 77/167 (46%), Positives = 106/167 (63%)

Query:   104 VTGTLFGSKRGHVHFAFQKDPNS-PPAFLVELATPISGLVREMASGLVRIALXXXXXXXX 162
             V GT+FG ++GHV F  Q D  S  P  L+EL+   S LV EM SGLVR+AL        
Sbjct:    81 VIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIATSQLVHEMGSGLVRVALECPTRPEL 140

Query:   163 XXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLP---GTGDE 219
                 +R +  P+W  +CNG+K GFA RR    +   +LK +E +++GAGVLP   G G  
Sbjct:   141 KSCLLRSV--PVWTMFCNGRKLGFAVRRSANEETRMMLKRLESMTVGAGVLPSGSGLGGS 198

Query:   220 AEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLR 266
              E++ D E+MYMRA +E +VGS DSE+F+++NPD+N   ELS++LLR
Sbjct:   199 DESDTD-EVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLR 244


>TAIR|locus:2165477 [details] [associations]
            symbol:AT5G42680 "AT5G42680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB007647
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 EMBL:BT014788 EMBL:BT015690 IPI:IPI00544983
            RefSeq:NP_001190452.1 RefSeq:NP_199082.1 UniGene:At.30159
            PaxDb:Q9FMZ6 PRIDE:Q9FMZ6 DNASU:834277 EnsemblPlants:AT5G42680.1
            EnsemblPlants:AT5G42680.2 GeneID:834277 KEGG:ath:AT5G42680
            TAIR:At5g42680 eggNOG:NOG270449 InParanoid:Q9FMZ6 OMA:LSSGCKM
            PhylomeDB:Q9FMZ6 ProtClustDB:CLSN2686612 Genevestigator:Q9FMZ6
            Uniprot:Q9FMZ6
        Length = 238

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 78/177 (44%), Positives = 111/177 (62%)

Query:    92 HRSNLPLGLGPRVTGTLFGSKRGHVHFAFQKDPNSPPAFLVELATPISGLVREMASGLVR 151
             HR   PL      TGT+FG ++G V  A Q+DP+  P F++EL    S L +EMAS  VR
Sbjct:    67 HRR--PLLKDYATTGTIFGFRKGRVFLAIQEDPHCLPIFIIELPMLTSALQKEMASETVR 124

Query:   152 IALXXXXXXXXXXXAVRLLEEPMWRTYCNGKKCGFATRRE-CGAKEWKVLKAVEPISMGA 210
             IAL             ++LEE +W  YCNG+K G++ RR+    +E  V+ A+  +SMGA
Sbjct:   125 IALESETKTSRK----KVLEEYVWGIYCNGRKIGYSIRRKNMSEEEMYVIDALRGVSMGA 180

Query:   211 GVLPGTGDEAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGT-PELSVYLLR 266
             GVLP   ++ +   +GE+ YMRA+F+R++GS+DSEA YM+NP+ +G   ELS+Y LR
Sbjct:   181 GVLP-CKNQYDQETEGEMTYMRARFDRVIGSKDSEALYMINPEGSGQGTELSIYFLR 236


>TAIR|locus:2011766 [details] [associations]
            symbol:AT1G76610 "AT1G76610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC015450 InterPro:IPR006460
            Pfam:PF04759 TIGRFAMs:TIGR01570 ProtClustDB:CLSN2682776
            EMBL:AY773831 IPI:IPI00523062 PIR:C96794 RefSeq:NP_177787.1
            UniGene:At.50810 UniGene:At.68756 EnsemblPlants:AT1G76610.1
            GeneID:843994 KEGG:ath:AT1G76610 TAIR:At1g76610 InParanoid:Q9C9J7
            OMA:RETTEND PhylomeDB:Q9C9J7 Genevestigator:Q9C9J7 Uniprot:Q9C9J7
        Length = 226

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 74/168 (44%), Positives = 98/168 (58%)

Query:   101 GPRVTGTLFGSKRGHVHFAFQKD--PNSPPAFLVELATPISGLVREMASGLVRIALXXXX 158
             G  VTGT +G +RGHV F  Q D  P+SPP  L+ELA P + L REM  G +RIAL    
Sbjct:    73 GVVVTGTFYGHRRGHVSFCLQDDTRPSSPPLLLLELAVPTAALAREMEEGFLRIALRSKS 132

Query:   159 XXXXXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGTGD 218
                     V     P+W  YCNG+K GFA RRE    +   L+ ++ +S+GAGV+P    
Sbjct:   133 NRRSSIFNV-----PVWSMYCNGRKFGFAVRRETTENDVGFLRLMQSVSVGAGVIP---- 183

Query:   219 EAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLR 266
                   +GE +Y+RAKFER+ GS DSE+F+M+N       ELS++L R
Sbjct:   184 ------NGETLYLRAKFERVTGSSDSESFHMVNQGGGYGQELSIFLSR 225


>TAIR|locus:2199577 [details] [associations]
            symbol:AT1G21050 "AT1G21050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 EMBL:BT024463 IPI:IPI00526824 RefSeq:NP_564130.1
            UniGene:At.41674 DNASU:838699 EnsemblPlants:AT1G21050.1
            GeneID:838699 KEGG:ath:AT1G21050 TAIR:At1g21050 eggNOG:NOG284676
            InParanoid:Q2HIW8 OMA:REFRHRR PhylomeDB:Q2HIW8
            ProtClustDB:CLSN2682776 Genevestigator:Q2HIW8 Uniprot:Q2HIW8
        Length = 245

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 65/165 (39%), Positives = 99/165 (60%)

Query:   104 VTGTLFGSKRGHVHFAFQKDP-NSPPAFLVELATPISGLVREM-ASGLVRIALXXXXXXX 161
             V+GT FG +RG V F  Q     S P  L+ELA P + L +EM   G++RIAL       
Sbjct:    87 VSGTFFGHRRGRVSFCLQDAAVGSSPLLLLELAVPTAALAKEMDEEGVLRIALECDRRRS 146

Query:   162 XXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGTGDEAE 221
                 +  + + P+W  +CNG+K GFA RR+    +   L+ ++ +S+GAGV+P   ++  
Sbjct:   147 SNSRSSSIFDVPVWSMFCNGRKMGFAVRRKVTENDAVFLRMMQSVSVGAGVVPSEEED-- 204

Query:   222 ANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLR 266
                  +++Y+RA+FER+ GS DSE+F+MMNP  +   ELS++LLR
Sbjct:   205 -----QMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLR 244


>TAIR|locus:2168257 [details] [associations]
            symbol:AT5G65340 "AT5G65340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB011479
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 ProtClustDB:CLSN2686465 EMBL:BT010415
            EMBL:AK175638 IPI:IPI00537820 RefSeq:NP_201337.1 UniGene:At.28913
            EnsemblPlants:AT5G65340.1 GeneID:836659 KEGG:ath:AT5G65340
            TAIR:At5g65340 eggNOG:NOG287791 OMA:WRLLRTI PhylomeDB:Q9FKQ4
            Genevestigator:Q9FKQ4 Uniprot:Q9FKQ4
        Length = 253

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 65/168 (38%), Positives = 93/168 (55%)

Query:   105 TGTLFGSKRGHVHFAFQKDPN---SPPAFLVELATPISGLVREMASGLVRIALXXXXXXX 161
             TGT+FG +RG V+F  Q   +   +P   L+EL  P   L REM  G++RIAL       
Sbjct:    84 TGTIFGFRRGKVNFCIQATNSKTLNPIIVLLELTVPTEVLAREMQGGVLRIALESNNNDG 143

Query:   162 XXX---XAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGTGD 218
                    +  LL  P+W  YCNG+K GFA +RE    E   LK + P++ GAGV+   G+
Sbjct:   144 YDSHEDSSSSLLTTPLWNMYCNGRKVGFAIKREPSKSELAALKVLTPVAEGAGVV--NGE 201

Query:   219 EAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVYLLR 266
             E        +MY+RA F+R+ GS DSE+F++++P      ELS++  R
Sbjct:   202 EINREKSDHMMYLRASFKRVFGSFDSESFHLVDPRGIIGQELSIFFSR 249


>TAIR|locus:2041238 [details] [associations]
            symbol:AT2G22460 "AT2G22460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
            HOGENOM:HOG000238116 InterPro:IPR006460 Pfam:PF04759
            TIGRFAMs:TIGR01570 EMBL:AY231426 EMBL:AY954794 IPI:IPI00520425
            RefSeq:NP_179832.2 UniGene:At.39434 UniGene:At.68865 DNASU:816778
            EnsemblPlants:AT2G22460.1 GeneID:816778 KEGG:ath:AT2G22460
            TAIR:At2g22460 eggNOG:NOG244287 OMA:DELMYLR PhylomeDB:Q84RJ3
            ProtClustDB:CLSN2686465 Genevestigator:Q84RJ3 Uniprot:Q84RJ3
        Length = 245

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 65/182 (35%), Positives = 98/182 (53%)

Query:    85 VLSTFGKHRSNLPLGLGPRVTGTLFGSKRGHVHFAFQKDPNSPPA-FLVELATPISGLVR 143
             + S     RS+  L     VTGT+FG ++G ++F  Q    S     L+ELA P + L R
Sbjct:    67 IKSRTSSFRSSSSLS-SSTVTGTIFGYRKGKINFCIQTPRKSTNLDLLLELAVPTTVLAR 125

Query:   144 EMASGLVRIALXXXXXXXXXXXAVRLLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAV 203
             EM  G +RI L               L +P W  YCNGK+ G+A +R     +   L A+
Sbjct:   126 EMREGALRIVLERNNEKQDDDS---FLSKPFWNMYCNGKRVGYARKRSPSQDDMTALTAL 182

Query:   204 EPISMGAGVLPGTGDEAEANADGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGTPELSVY 263
               + +GAGV+  TG E     D E+MY+RA F R+ GS++SE+F++++P  N   ELS++
Sbjct:   183 SKVVVGAGVV--TGKEL-GRFDDELMYLRASFRRVNGSKESESFHLIDPAGNIGQELSIF 239

Query:   264 LL 265
             ++
Sbjct:   240 IV 241


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      267       231   0.00084  113 3  11 22  0.40    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  12
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  182 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.02u 0.16s 17.18t   Elapsed:  00:00:00
  Total cpu time:  17.02u 0.16s 17.18t   Elapsed:  00:00:00
  Start:  Fri May 10 11:04:24 2013   End:  Fri May 10 11:04:24 2013

Back to top