Query 044800
Match_columns 267
No_of_seqs 94 out of 110
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 11:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044800.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044800hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jifa_ d.32.1.2 (A:) Bleomyci 39.0 5.4 0.00039 26.8 1.4 11 245-255 104-114 (122)
2 d1xrka_ d.32.1.2 (A:) Bleomyci 34.6 7 0.00051 25.8 1.4 11 245-255 103-113 (120)
3 d1ecsa_ d.32.1.2 (A:) Bleomyci 30.5 8.7 0.00063 25.9 1.3 10 246-255 102-111 (120)
4 d1yq2a3 b.18.1.5 (A:4-219) bet 23.4 15 0.0011 28.8 1.7 12 176-187 148-159 (216)
5 d1pj5a1 b.44.2.1 (A:743-830) N 23.0 29 0.0021 23.7 3.0 37 169-216 17-53 (88)
6 d1jz8a3 b.18.1.5 (A:13-219) be 22.2 16 0.0012 28.2 1.7 12 176-187 139-150 (207)
7 d1tg7a2 b.18.1.27 (A:667-848) 20.1 21 0.0015 27.7 1.9 14 174-187 91-104 (182)
8 d2ix0a1 b.40.4.5 (A:83-172) Ex 17.6 88 0.0064 21.4 4.7 29 102-132 2-30 (90)
9 d2pjsa1 d.32.1.2 (A:3-113) Unc 16.7 24 0.0018 22.6 1.3 11 245-255 96-106 (111)
10 d1kw3b2 d.32.1.3 (B:133-288) 2 16.2 21 0.0016 25.9 1.0 16 245-260 114-129 (156)
No 1
>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}
Probab=39.02 E-value=5.4 Score=26.76 Aligned_cols=11 Identities=27% Similarity=0.570 Sum_probs=9.8
Q ss_pred ceeeeecCCCC
Q 044800 245 EAFYMMNPDSN 255 (267)
Q Consensus 245 EsFyMinPdg~ 255 (267)
.+||+.|||||
T Consensus 104 ~~~~~~DPdGn 114 (122)
T d1jifa_ 104 REFAVRDPAGN 114 (122)
T ss_dssp EEEEEECTTCC
T ss_pred EEEEEECCCCC
Confidence 48999999997
No 2
>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}
Probab=34.61 E-value=7 Score=25.77 Aligned_cols=11 Identities=27% Similarity=0.607 Sum_probs=9.6
Q ss_pred ceeeeecCCCC
Q 044800 245 EAFYMMNPDSN 255 (267)
Q Consensus 245 EsFyMinPdg~ 255 (267)
-+||+.|||||
T Consensus 103 ~~~~~~DPdGn 113 (120)
T d1xrka_ 103 REFALRDPAGN 113 (120)
T ss_dssp EEEEEECTTCC
T ss_pred EEEEEECCCCC
Confidence 46899999997
No 3
>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}
Probab=30.47 E-value=8.7 Score=25.92 Aligned_cols=10 Identities=20% Similarity=0.488 Sum_probs=9.0
Q ss_pred eeeeecCCCC
Q 044800 246 AFYMMNPDSN 255 (267)
Q Consensus 246 sFyMinPdg~ 255 (267)
.||+.|||||
T Consensus 102 ~~~~~DPDGn 111 (120)
T d1ecsa_ 102 MAALVDPDGT 111 (120)
T ss_dssp EEEEECTTSC
T ss_pred EEEEECCCCC
Confidence 4899999997
No 4
>d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=23.35 E-value=15 Score=28.77 Aligned_cols=12 Identities=25% Similarity=0.722 Sum_probs=10.4
Q ss_pred eeEecCceeeee
Q 044800 176 RTYCNGKKCGFA 187 (267)
Q Consensus 176 tmYCNGRK~GYA 187 (267)
.+||||+.+|+.
T Consensus 148 ~V~vNG~~vG~~ 159 (216)
T d1yq2a3 148 KVWVNGQEIGVG 159 (216)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEeEE
Confidence 588999999975
No 5
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase, C-terminal domain {Arthrobacter globiformis [TaxId: 1665]}
Probab=23.03 E-value=29 Score=23.69 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=22.8
Q ss_pred ccccceeeeEecCceeeeeeeecCChhHHHHHHHhcccccccccccCC
Q 044800 169 LLEEPMWRTYCNGKKCGFATRRECGAKEWKVLKAVEPISMGAGVLPGT 216 (267)
Q Consensus 169 LleepvWtmYCNGRK~GYAvRRe~t~~D~~VL~~l~~VSmGAGVLP~~ 216 (267)
.-.||+| .||++|||-..=--+.. -.-++|-|.||..
T Consensus 17 ~g~epI~---~~g~~VG~vTS~~~Sp~--------l~k~Iala~v~~~ 53 (88)
T d1pj5a1 17 LGKEPVF---YKEQAVGYVTSAAYGYT--------VAKPIAYSYLPGT 53 (88)
T ss_dssp CSCCEEE---ETTEEEEECCSEEEETT--------TTEEEEEEEEETT
T ss_pred CCCCeEE---ECCEEEEEEECCeECch--------hccceEEEEEecC
Confidence 3457776 79999999765432211 0135666788854
No 6
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]}
Probab=22.25 E-value=16 Score=28.20 Aligned_cols=12 Identities=33% Similarity=1.019 Sum_probs=10.3
Q ss_pred eeEecCceeeee
Q 044800 176 RTYCNGKKCGFA 187 (267)
Q Consensus 176 tmYCNGRK~GYA 187 (267)
++||||+.||+.
T Consensus 139 ~V~vNG~~vG~~ 150 (207)
T d1jz8a3 139 HLWCNGRWVGYG 150 (207)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEEEe
Confidence 578999999974
No 7
>d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]}
Probab=20.12 E-value=21 Score=27.68 Aligned_cols=14 Identities=14% Similarity=-0.019 Sum_probs=11.9
Q ss_pred eeeeEecCceeeee
Q 044800 174 MWRTYCNGKKCGFA 187 (267)
Q Consensus 174 vWtmYCNGRK~GYA 187 (267)
...+|+||+.||+-
T Consensus 91 ~~~VwlNG~~vG~h 104 (182)
T d1tg7a2 91 GHSIWINETYVGSW 104 (182)
T ss_dssp CEEEEETTEEEEEE
T ss_pred eeEEEECCEEEeee
Confidence 46789999999974
No 8
>d2ix0a1 b.40.4.5 (A:83-172) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=17.61 E-value=88 Score=21.44 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=22.7
Q ss_pred ceEEEEEeecCCCceeeeeecCCCCCCeEEE
Q 044800 102 PRVTGTLFGSKRGHVHFAFQKDPNSPPAFLV 132 (267)
Q Consensus 102 t~vTGTlFG~RrGrV~faiQedp~~~P~lLL 132 (267)
|+++||++ +++...|-+-+||+-.--++|
T Consensus 2 trfVGr~~--~~~~~~fVvPd~~ri~~~I~I 30 (90)
T d2ix0a1 2 TRFVGKVQ--GKNDRLAIVPDHPLLKDAIPC 30 (90)
T ss_dssp SEEEEEEE--SCSSSEEEEESCTTCCSCEEE
T ss_pred ccEEEEEE--EeCCEEEEEeCCCcccccccc
Confidence 68999996 666788999999986554544
No 9
>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=16.74 E-value=24 Score=22.65 Aligned_cols=11 Identities=9% Similarity=0.480 Sum_probs=9.5
Q ss_pred ceeeeecCCCC
Q 044800 245 EAFYMMNPDSN 255 (267)
Q Consensus 245 EsFyMinPdg~ 255 (267)
..||+-|||||
T Consensus 96 ~~~~~~DP~Gn 106 (111)
T d2pjsa1 96 QRLFLRDPFGK 106 (111)
T ss_dssp EEEEEECTTSC
T ss_pred EEEEEECCCCC
Confidence 47899999997
No 10
>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}
Probab=16.24 E-value=21 Score=25.92 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=11.8
Q ss_pred ceeeeecCCCCCCCce
Q 044800 245 EAFYMMNPDSNGTPEL 260 (267)
Q Consensus 245 EsFyMinPdg~~GpEL 260 (267)
-+||..||||+..-|+
T Consensus 114 ~s~Y~~DP~G~~~~E~ 129 (156)
T d1kw3b2 114 LSFYADTPSPMIEVEF 129 (156)
T ss_dssp EEEEEECSSTTCEEEE
T ss_pred EEEEEECCCCCeEEEE
Confidence 3799999999743344
Done!