BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044803
(141 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+GFIS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGFISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+GFIS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGFISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+GFIS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGFISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+GFIS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGFISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+GFIS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGFISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + +S +D
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDID 132
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 29/127 (22%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K+ +++ +L+EAF VFD +G+G IS EL+
Sbjct: 70 SLMARKMKEQDSE-----------------------EELIEAFKVFDRDGNGLISAAELR 106
Query: 121 NVLSRLG 127
+V++ LG
Sbjct: 107 HVMTNLG 113
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 29/127 (22%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K+ +++ +L+EAF VFD +G+G IS EL+
Sbjct: 70 SLMARKMKEQDSE-----------------------EELIEAFKVFDRDGNGLISAAELR 106
Query: 121 NVLSRLG 127
+V++ LG
Sbjct: 107 HVMTNLG 113
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++++ + + E++ EAF VFD +G+G+IS EL+
Sbjct: 362 IM---MARKMKDTDSEEEIR--------------------EAFRVFDKDGNGYISAAELR 398
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 399 HVMTNLGEKLTDEE 412
Score = 31.6 bits (70), Expect = 0.15, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 423
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 33/134 (24%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K+ D E ++ EAF VFD +G+GFIS EL+
Sbjct: 70 TMMA-------RKMKDSE------------------EEIREAFRVFDKDGNGFISAAELR 104
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 105 HVMTNLGEKLTDEE 118
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D E
Sbjct: 5 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 59 FLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEE 118
FL K +++ +L EAF VFD +G+GFIS E
Sbjct: 65 FLNLMARKMKDTDSE-----------------------EELKEAFRVFDKDGNGFISAAE 101
Query: 119 LQNVLSRLG--LWDEK 132
L++V++ LG L DE+
Sbjct: 102 LRHVMTNLGEKLTDEE 117
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 81 ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 128
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 334 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 370
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 371 HVMTNLGEKLTDEE 384
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 348 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 395
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 68 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 104
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 105 HVMTNLGEKLTDEE 118
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 337 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 373
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 374 HVMTNLGEKLTDEE 387
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 398
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 337 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 373
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 374 HVMTNLGEKLTDEE 387
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 398
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ +L EAF VFD +G+GFIS EL+
Sbjct: 70 NLMARKMKDTDSE-----------------------EELKEAFRVFDKDGNGFISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 84 ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 32/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++ + D E++ EAF VFD +G+G+IS EL+
Sbjct: 66 ----TMMARKMKDTDSEEIR--------------------EAFRVFDKDGNGYISAAELR 101
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 102 HVMTNLGEKLTDEE 115
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 33/55 (60%)
Query: 1 MCPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
M + +++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++++D
Sbjct: 72 MKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANID 126
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 72 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 108
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 109 HVMTNLGEKLTDEE 122
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 133
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 76 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 112
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 113 HVMTNLGEKLTDEE 126
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 137
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 74 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 110
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 111 HVMTNLGEKLTDEE 124
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 135
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEXLTDEE 121
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADID 132
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEXLTDEE 120
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADID 131
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 66 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 102
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 103 HVMTNLGEKLTDEE 116
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 127
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 31/48 (64%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++++D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANID 131
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 67 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 103
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 104 HVMTNLGEKLTDEE 117
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 81 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 128
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D E
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 59 FLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEE 118
FL K +++ ++ EAF VFD +G+G+IS E
Sbjct: 69 FLTMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAE 105
Query: 119 LQNVLSRLG--LWDEK 132
L++V++ LG L DE+
Sbjct: 106 LRHVMTNLGEKLTDEE 121
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADID 132
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 71 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 108 HVMTNLGEKLTDEE 121
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 69 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 105
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 106 HVMTNLGEKLTDEE 119
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 83 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 130
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 68 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 104
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 105 HVMTNLGEKLTDEE 118
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 68 TMMARKMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 104
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 105 HVMTNLGEKLTDEE 118
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K D E K L EAF VFD +G+GFIS EL+
Sbjct: 70 NLMARKMKDT-----DSEEK------------------LKEAFRVFDKDGNGFISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 107 HVMTNLGEKLTDEE 120
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
L+ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 29/129 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
+ + F DK+GD ++ EL ++ +G + EL + G ++D E
Sbjct: 8 QVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPE 67
Query: 59 FLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEE 118
FL K +N+ ++ EAF VFD +G+GF+S E
Sbjct: 68 FLGMMARKMKDTDNE-----------------------EEIREAFRVFDKDGNGFVSAAE 104
Query: 119 LQNVLSRLG 127
L++V++RLG
Sbjct: 105 LRHVMTRLG 113
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ VS EL ++ R+G +LS EE++ + + D
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTD 131
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLF 61
A+ + F DK+ +S EL ++ +G+ S E+ + + +D N EF
Sbjct: 9 QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSE 68
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
F +S+Q K +D E +LLEAF VFD NGDG IS EL++
Sbjct: 69 FLALMSRQL--KCNDSE------------------QELLEAFKVFDKNGDGLISAAELKH 108
Query: 122 VLSRLG 127
VL+ +G
Sbjct: 109 VLTSIG 114
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLS 41
C +L FK DKNGD +S EL +L IG +L+
Sbjct: 79 CNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 118
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
EAF +FD + G IS EL V+ LGL
Sbjct: 15 EAFALFDKDNSGSISASELATVMRSLGL 42
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 23/126 (18%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLF 61
A+ + F DK+ + +S EL ++ +G+ S E+ + + +D N EF
Sbjct: 9 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 68
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
F +S+Q K +D E +LLEAF VFD NGDG IS EL++
Sbjct: 69 FLALMSRQL--KSNDSE------------------QELLEAFKVFDKNGDGLISAAELKH 108
Query: 122 VLSRLG 127
VL+ +G
Sbjct: 109 VLTSIG 114
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELE 46
+L FK DKNGD +S EL +L IG +L+ E++
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
EAF +FD + +G IS EL V+ LGL
Sbjct: 15 EAFALFDKDNNGSISSSELATVMRSLGL 42
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++++ + + E++ EAF VFD +G+G+IS EL+
Sbjct: 372 TM---MARKMKDTDSEEEIR--------------------EAFRVFDKDGNGYISAAELR 408
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 409 HVMTNLGEKLTDEE 422
Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 433
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 23/124 (18%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLFFW 63
A+ + F DK+ + +S EL ++ +G+ S E+ + + +D N EF F
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 64 KSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVL 123
+S+Q K +D E +LLEAF VFD NGDG IS EL++VL
Sbjct: 70 ALMSRQL--KSNDSE------------------QELLEAFKVFDKNGDGLISAAELKHVL 109
Query: 124 SRLG 127
+ +G
Sbjct: 110 TSIG 113
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELE 46
+L FK DKNGD +S EL +L IG +L+ ELE
Sbjct: 84 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
EAF +FD + +G IS EL V+ LGL
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGL 41
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 23/126 (18%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLF 61
A+ + F DK+ + +S EL ++ +G+ S E+ + + +D N EF
Sbjct: 8 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
F +S+Q K +D E +LLEAF VFD NGDG IS EL++
Sbjct: 68 FLALMSRQL--KSNDSE------------------QELLEAFKVFDKNGDGLISAAELKH 107
Query: 122 VLSRLG 127
VL+ +G
Sbjct: 108 VLTSIG 113
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELE 46
+L FK DKNGD +S EL +L IG +L+ E++
Sbjct: 84 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
EAF +FD + +G IS EL V+ LGL
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGL 41
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++++ + + E++ EAF VFD +G+G+IS EL+
Sbjct: 371 TM---MARKMKDTDSEEEIR--------------------EAFRVFDKDGNGYISAAELR 407
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 408 HVMTNLGEKLTDEE 421
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLFFW 63
A+ + F DK+GD ++ +EL ++ +G + EL+ + + D N +F F
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 64 KSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVL 123
++++ + + E++ EAF VFD +G+G+IS EL++V+
Sbjct: 371 TMMARKMKDTDSEEEIR--------------------EAFRVFDKDGNGYISAAELRHVM 410
Query: 124 SRLG--LWDEK 132
+ LG L DE+
Sbjct: 411 TNLGEKLTDEE 421
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++++ + + E++ EAF VFD +G+G+IS EL+
Sbjct: 370 TM---MARKMKDTDSEEEIR--------------------EAFRVFDKDGNGYISAAELR 406
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 407 HVMTNLGEKLTDEE 420
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 371 TMMARWMKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 407
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 408 HVMTNLGEKLTDEE 421
Score = 30.8 bits (68), Expect = 0.24, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++ + D E ++ EAF VFD +G+G+IS EL+
Sbjct: 370 ----TMMARKMKYTDSEE-------------------EIREAFRVFDKDGNGYISAAELR 406
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 407 HVMTNLGEKLTDEE 420
Score = 31.2 bits (69), Expect = 0.21, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++ + D E ++ EAF VFD +G+G+IS EL+
Sbjct: 371 ----TMMARKMKYTDSEE-------------------EIREAFRVFDKDGNGYISAAELR 407
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 408 HVMTNLGEKLTDEE 421
Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++ + D E ++ EAF VFD +G+G+IS EL+
Sbjct: 370 ----TMMARKMKYTDSEE-------------------EIREAFRVFDKDGNGYISAAELR 406
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 407 HVMTNLGEKLTDEE 420
Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 370
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
++ + D E ++ EAF VFD +G+G+IS EL+
Sbjct: 371 ----TMMARKMKYTDSEE-------------------EIREAFRVFDKDGNGYISAAELR 407
Query: 121 NVLSRLG--LWDEK 132
+V++ LG L DE+
Sbjct: 408 HVMTNLGEKLTDEE 421
Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL + +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TXXARKXKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V + LG L DE+
Sbjct: 107 HVXTNLGEKLTDEE 120
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL + +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL + +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL 70
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 71 TXXARKXKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 107
Query: 121 NVLSRLG--LWDEK 132
+V + LG L DE+
Sbjct: 108 HVXTNLGEKLTDEE 121
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL + +G +L+ EE++ + ++ +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADID 132
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL + +G + EL+ + G +++ EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFL 69
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K +++ ++ EAF VFD +G+G+IS EL+
Sbjct: 70 TXXARCXKDTDSE-----------------------EEIREAFRVFDKDGNGYISAAELR 106
Query: 121 NVLSRLG--LWDEK 132
+V + LG L DE+
Sbjct: 107 HVXTNLGEKLTDEE 120
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL + +G +L+ EE++ + ++ +D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLF 61
A+ + F Q DK G +++ EL L+ +G + EL+ + ++ + N F
Sbjct: 8 QIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
F ++KQ + E++ EAF +FD +GDGFIS EL+
Sbjct: 68 FCGIMAKQMRETDTEEEMR--------------------EAFKIFDRDGDGFISPAELRF 107
Query: 122 VLSRLG 127
V+ LG
Sbjct: 108 VMINLG 113
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ FK D++GD +S EL +++ +G +++ EE++ + ++ D
Sbjct: 84 EMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFD 131
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S++EL ++ +G + EEL++ + G ++D EFL
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L E F +FD N DG+I EEL
Sbjct: 77 VMMVRQMKEDAKGKSEEE--------------------LAECFRIFDRNADGYIDAEELA 116
Query: 121 NVLSRLG 127
+ G
Sbjct: 117 EIFRASG 123
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L F+ D+N D + EEL + G ++ EE+ES + +D +EFL
Sbjct: 94 ELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLK 153
Query: 62 FWKSI 66
+ +
Sbjct: 154 MMEGV 158
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 31/136 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
++ + F DK+GD ++ +EL ++ +G + EL+ + G ++D E
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 59 FLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEE 118
FL K +++ +L EAF VFD + +GFIS E
Sbjct: 69 FLNLMARKMKDTDSE-----------------------EELKEAFRVFDKDQNGFISAAE 105
Query: 119 LQNVLSRLG--LWDEK 132
L++V++ LG L DE+
Sbjct: 106 LRHVMTNLGEKLTDEE 121
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ F+ DK+ + +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 31/136 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
++ + F DK+GD ++ +EL ++ +G + EL+ + G ++D E
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 59 FLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEE 118
FL K +++ +L EAF VFD + +GFIS E
Sbjct: 69 FLNLMARKMKDTDSE-----------------------EELKEAFRVFDKDQNGFISAAE 105
Query: 119 LQNVLSRLG--LWDEK 132
L++V++ LG L DE+
Sbjct: 106 LRHVMTNLGEKLTDEE 121
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ F+ DK+ + +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S++EL ++ +G + EEL++ + G ++D EFL
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L E F +FD N DG+I EEL
Sbjct: 77 VMMVRQMKEDAKGKSEEE--------------------LAELFRIFDRNADGYIDAEELA 116
Query: 121 NVLSRLG 127
+ G
Sbjct: 117 EIFRASG 123
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ D+N D + EEL + G ++ EE+ES + +D +EFL
Sbjct: 94 ELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLK 153
Query: 62 FWKSI 66
+ +
Sbjct: 154 MMEGV 158
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S +EL ++ +G + EEL++ + G ++D EFL
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L + F +FD N DGFI EEL
Sbjct: 80 VMMVRQMKEDAKGKSEEE--------------------LADCFRIFDKNADGFIDIEELG 119
Query: 121 NVLSRLG 127
+L G
Sbjct: 120 EILRATG 126
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS------LDLNEFL 60
AD RIF DKN D + +EEL +L G ++ E++E + S +D +EFL
Sbjct: 99 ADCFRIF---DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Query: 61 FFWKSI 66
+ +
Sbjct: 156 KMMEGV 161
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S +EL ++ +G + EEL++ + G ++D EFL
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L F +FD N DGFI EEL
Sbjct: 80 VMMVRQMKEDAKGKSEEE--------------------LANCFRIFDKNADGFIDIEELG 119
Query: 121 NVLSRLG 127
+L G
Sbjct: 120 EILRATG 126
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS------LDLNEFLF 61
+L F+ DKN D + +EEL +L G ++ E++E + S +D +EFL
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 62 FWKSI 66
+ +
Sbjct: 157 MMEGV 161
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 43.1 bits (100), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLFFW 63
A+ + F DK+GD ++ ++L ++ +G + EL+ + + D N +F F
Sbjct: 311 AEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFL 370
Query: 64 KSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVL 123
++++ + + E++ EAF VF +G+G+IS +L++V+
Sbjct: 371 TMMARKMKDTDSEEEIR--------------------EAFRVFGKDGNGYISAAQLRHVM 410
Query: 124 SRLG--LWDEK 132
+ LG L DE+
Sbjct: 411 TNLGEKLTDEE 421
Score = 27.3 bits (59), Expect = 3.3, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ K+G+ +S +L ++ +G +L+ EE++ + ++ +D
Sbjct: 385 EIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGID 432
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S +EL ++ +G + EEL++ + G ++D EFL
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L F +FD N DGFI EEL
Sbjct: 80 VMMVRQMKEDAKGKSEEE--------------------LANCFRIFDKNADGFIDIEELG 119
Query: 121 NVLSRLG 127
+L G
Sbjct: 120 EILRATG 126
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS------LDLNEFLF 61
+L F+ DKN D + +EEL +L G + E++E + S +D +EFL
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 62 FWKSI 66
+ +
Sbjct: 157 MMEGV 161
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 25/133 (18%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN---EFLF 61
D + F DK+GD +++EEL ++ + + EEL+ + + D N EF
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
F ++K KV D + + +L EAF VFD + +G+IS EL++
Sbjct: 68 FLSLMAK----KVKDTDAE----------------EELKEAFKVFDKDQNGYISASELRH 107
Query: 122 VLSRLG--LWDEK 132
V+ LG L DE+
Sbjct: 108 VMINLGEKLTDEE 120
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ FK DK+ + +S EL ++ +G +L+ EE+E + ++ LD
Sbjct: 84 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 131
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S +EL ++ +G + EEL++ + G ++D EFL
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L + F +FD N DGFI EEL
Sbjct: 80 VMMVRQMKEDAKGKSEEE--------------------LEDCFRIFDKNADGFIDIEELG 119
Query: 121 NVLSRLG 127
+L G
Sbjct: 120 EILRATG 126
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS------LDLNEFLF 61
+L+ F+ DKN D + +EEL +L G ++ E++E + S +D +EFL
Sbjct: 97 ELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 62 FWKSI 66
+ +
Sbjct: 157 MMEGV 161
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 26/127 (20%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F D +G +S +EL ++ +G + EEL++ + G ++D EFL
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 61 FFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQ 120
K++ + E L F +FD N DGFI EEL
Sbjct: 77 VMMVRQMKEDAKGKSEEE--------------------LANCFRIFDKNADGFIDIEELG 116
Query: 121 NVLSRLG 127
+L G
Sbjct: 117 EILRATG 123
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS------LDLNEFLF 61
+L F+ DKN D + +EEL +L G ++ E++E + S +D +EFL
Sbjct: 94 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 153
Query: 62 FWKSI 66
+ +
Sbjct: 154 MMEGV 158
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 37/136 (27%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFF 62
L R F+QLD++G + +E L ++G+ L E E G +LDL EFL
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
+ Q V + AF D +GDG ++ ++L+ V
Sbjct: 99 LRPPMSQAREAV------------------------IAAAFAKLDRSGDGVVTVDDLRGV 134
Query: 123 LS-------RLGLWDE 131
S R G W E
Sbjct: 135 YSGRAHPKVRSGEWTE 150
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
D++RIFK+ D NGD ++SL EL L +G S +E++ + G +D NEF+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 62 FWKS 65
F +
Sbjct: 63 FCNA 66
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMI 141
D+ F FD NGDG IS EL + L LG S + RM+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMM 44
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
D++RIFK+ D NGD ++SL EL L +G S +E++ + G +D NEF+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 62 FWKS 65
F +
Sbjct: 62 FCNA 65
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMI 141
D+ F FD NGDG IS EL + L LG S + RM+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMM 43
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 24/127 (18%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFFWKSI 66
A L+ F +D + Q++ EEL L+R+G L E+ + +D + + + + I
Sbjct: 27 AGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFI 86
Query: 67 SKQ---NNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVL 123
+ N + +DH L AF FD +G G+I+ +ELQ
Sbjct: 87 AATLHLNKIEREDH---------------------LFAAFTYFDKDGSGYITPDELQQAC 125
Query: 124 SRLGLWD 130
G+ D
Sbjct: 126 EEFGVED 132
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFFWKSISK 68
L+ +FK +D + ++ +EL L+R+G L E++ + + +D + + + + I+
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 69 QNN-NKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ NK++ E +L+ AF+ FD +G G+I+ +E+Q G
Sbjct: 72 TVHLNKLEREE-------------------NLVSAFSYFDKDGSGYITLDEIQQACKDFG 112
Query: 128 LWD 130
L D
Sbjct: 113 LDD 115
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VLS LG
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLG 115
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSL 54
AD FK D+ G +S EL +L +G RLS EE++ + + L
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDL 132
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VLS LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLG 114
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSL 54
AD FK D+ G +S EL +L +G RLS EE++ + + L
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDL 131
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L+EAF VFD +G+G IS EL++V++ LG
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLG 38
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIG------VRLSLEELESFVGKSSLD 55
P AD +RIFK+ D NGD ++S EL L+ +G VR + E+++ G +
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDT-DGDGFIS 64
Query: 56 LNEFLFFWKS 65
+EF F ++
Sbjct: 65 FDEFTDFARA 74
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 103 FNVFDLNGDGFISCEELQNVLSRLG 127
F FD NGDG IS EL + L LG
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG 41
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VLS LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLG 114
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSL 54
AD FK D+ G +S EL +L +G RLS EE++ + + L
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDL 131
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS EL++V++ LG L DE+
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 46
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 57
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VL+ LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALG 114
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS EL++V++ LG L DE+
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 45
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 56
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VL+ LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALG 114
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VL+ LG
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALG 114
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS EL++V++ LG L DE+
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 43
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 54
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS EL++V++ LG L DE+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 42
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 53
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VL+ LG
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALG 111
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS EL++V++ LG L DE+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 39
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 50
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VL+ LG
Sbjct: 82 ADYMEAFKTFDREGQGFISGAELRHVLTALG 112
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+D +EAF FD G GFIS EL++VL+ LG
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALG 111
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS EL++V++ LG L DE+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 42
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 53
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF VFD +G+G+IS EL++V++ LG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 PLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFF 62
P A+ +RIFK+ D NGD ++S EL L+ +G ++ +E++ + + D + F+ F
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISF 63
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 14/25 (56%)
Query: 103 FNVFDLNGDGFISCEELQNVLSRLG 127
F FD NGDG IS EL L LG
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG 39
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEF-LFFWKSIS 67
+Q F+ DK+ D +VS+EEL L +G + EL + G+ L+ EF L +K++
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ--LNAKEFDLATFKTVY 64
Query: 68 KQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ + ++L+AF D G+G I EL+ +L LG
Sbjct: 65 RKPIKTPTEQ------------------SKEMLDAFRALDKEGNGTIQEAELRQLLLNLG 106
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF VFD +G+G+IS +L++V++ LG L DE+
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEE 44
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/48 (22%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S +L ++ +G +L+ EE++ + ++ +D
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADID 55
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
+L EAF VFD + +GFIS EL++V++ LG L DE+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 41
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ F+ DK+ + +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 52
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKV 74
D +S +EL ++ +G + EEL+ + G ++D +EFL K ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 75 DDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ E+ SDL F +FD N DG+I EEL+ +L G
Sbjct: 93 SEEEL-----------------SDL---FRMFDKNADGYIDLEELKIMLQATG 125
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 62 FWKSI 66
F K +
Sbjct: 156 FMKGV 160
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKV 74
D +S +EL ++ +G + EEL+ + G ++D +EFL K ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 75 DDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ E+ SDL F +FD N DG+I EEL+ +L G
Sbjct: 93 TEEEL-----------------SDL---FRMFDKNADGYIDLEELKIMLQATG 125
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 62 FWKSI 66
F K +
Sbjct: 156 FMKGV 160
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
DLQ F+ D++GD ++++EL + +G L EEL++ + ++ +D
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVD 54
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
DL AF FD +GDG I+ +EL+ ++ LG
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLG 36
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 62 FWKSI 66
F K +
Sbjct: 156 FMKGV 160
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 26/110 (23%)
Query: 24 VSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDH 77
+S +EL ++ +G + EEL+ + G ++D +EFL K ++ +
Sbjct: 36 ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEE 95
Query: 78 EVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
E+ SDL F +FD N DG+I EEL+ +L G
Sbjct: 96 EL-----------------SDL---FRMFDKNADGYIDLEELKIMLQATG 125
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFF 62
L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL F
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 76
Query: 63 WKSI 66
K +
Sbjct: 77 MKGV 80
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 99 LLEAFNVFDLNGDGFISCEELQNVLSRLG 127
L + F +FD N DG+I EEL+ +L G
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATG 45
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS---LDLNEFLF--F 62
D + F D+ GD +++L ++ ++ +G + E+ +G S ++ + F F
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEF 64
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
+ NNK D +E VFD G+G + EL++V
Sbjct: 65 LPMLQAAANNK------------------DQGTFEDFVEGLRVFDKEGNGTVMGAELRHV 106
Query: 123 LSRLG 127
L+ LG
Sbjct: 107 LATLG 111
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGK------SSLDLNEFL 60
++R FK DK+G ++S +EL L + + +EELES + + +D NEF+
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFF 62
L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL F
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 71
Query: 63 WKSI 66
K +
Sbjct: 72 MKGV 75
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 99 LLEAFNVFDLNGDGFISCEELQNVLSRLG 127
L + F +FD N DG+I EEL+ +L G
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATG 40
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 62 FWKSI 66
F K +
Sbjct: 68 FMKGV 72
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L + F +FD N DG+I EEL+ +L G
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATG 37
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 21/79 (26%)
Query: 49 VGKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDL 108
+G+ + L E L ++ +S ++ D + +EAF FD
Sbjct: 58 MGEKAYKLEEILPIYEEMSSKDTGTAAD---------------------EFMEAFKTFDR 96
Query: 109 NGDGFISCEELQNVLSRLG 127
G G IS E++NVL LG
Sbjct: 97 EGQGLISSAEIRNVLKMLG 115
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + LEEL +L+ G ++ +++E + +D +EFL
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 62 FWKSI 66
F K +
Sbjct: 66 FMKGV 70
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 103 FNVFDLNGDGFISCEELQNVLSRLG 127
F +FD N DG+I EEL+ +L G
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQATG 35
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
++ EAF V D +G+G+IS EL++V++ LG L DE+
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEE 66
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+++ F+ DK+G+ +S EL ++ +G +L+ EE++ + ++ +D
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 77
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G+ + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 61 FFWKSISK 68
I K
Sbjct: 70 TMMARIMK 77
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
EAF+++D +GDG I+ +EL V+ LGL
Sbjct: 14 EAFSLYDKDGDGTITTKELGTVMRSLGL 41
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF VFD +G+GFIS +EL + LG
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLG 66
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKV 74
D +S +EL ++ +G + EEL+ + G ++D +EFL K ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 75 DDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ E+ SDL F +FD N DG+I +EL+ +L G
Sbjct: 93 SEEEL-----------------SDL---FRMFDKNADGYIDLDELKIMLQATG 125
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFF 62
L +F+ DKN D + L+EL +L+ G ++ +++E + +D +E L F
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEF 156
Query: 63 WKSI 66
K +
Sbjct: 157 MKGV 160
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L EAF VFD + +G+IS EL++V+ LG
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLG 39
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ FK DK+ + +S EL ++ +G +L+ EE+E + ++ LD
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 57
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++L AF VFD NGDG I +E + ++ ++G
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVG 38
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 11 RIFKQLDKNGDDQVSLEELNWLLERIGVR-LSLEELESFV------GKSSLDLNEFL 60
R FK D NGD + +E ++++++G L+ E+E + G +D+ EF+
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 33.5 bits (75), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKV 74
D +S +EL ++ +G + EEL+ + G ++D +EFL K ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 75 DDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ E+ SDL F +FD N DG+I +EL+ +L G
Sbjct: 93 SEEEL-----------------SDL---FRMFDKNADGYIDLDELKIMLQATG 125
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + L+EL +L+ G ++ +++E + +D +E+L
Sbjct: 96 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLE 155
Query: 62 FWKSI 66
F K +
Sbjct: 156 FMKGV 160
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG--LWDEK 132
+L EAF VFD + +G+IS EL++V+ LG L DE+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 41
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLD 55
+L+ FK DK+ + +S EL ++ +G +L+ EE+E + ++ LD
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 52
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFF 62
L +F+ DKN D + L+EL +L+ G ++ +++E + +D +EFL F
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 67
Query: 63 WKSI 66
K +
Sbjct: 68 MKGV 71
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 99 LLEAFNVFDLNGDGFISCEELQNVLSRLG 127
L + F +FD N DG+I +EL+ +L G
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATG 36
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLG 127
EAF++FD +GDG I+ +EL V+ LG
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 33.1 bits (74), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLG 127
EAF++FD +GDG I+ +EL V+ LG
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGL 128
++ EAF++FD+N DGF+ EL+ + LG
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGF 54
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 44 PSTLDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 30/128 (23%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEEL-----NWLLERIGVRLSLEELES----FVGKSSLDL 56
T +L IF+ +DKNGD Q+ +EL E + V L ++ES +G + D
Sbjct: 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAV-FDLPQIESEVDAILGAADFDR 403
Query: 57 NEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLE-AFNVFDLNGDGFIS 115
N ++ + + ++ + K D LE AF FD +G+G IS
Sbjct: 404 NGYIDYSEFVTVAMDRK-------------------SLLSKDKLESAFQKFDQDGNGKIS 444
Query: 116 CEELQNVL 123
+EL +V
Sbjct: 445 VDELASVF 452
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
S+ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLG 40
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
++ + F DK+GD ++ +EL ++ +G + EL+ + G ++D E
Sbjct: 8 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 59 FL 60
FL
Sbjct: 68 FL 69
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 43 PSTLDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++FD +GDG I+ +EL V+ LG
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
A+ + F DK+GD ++ +EL ++ +G + EL+ + G ++D EFL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKS--------SLDL 56
TA+ + F+ D+ GD ++ + ++ +G + E+ +G +L
Sbjct: 7 QTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKF 66
Query: 57 NEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISC 116
+FL ++I+K + D +E VFD G+G +
Sbjct: 67 EQFLPMMQTIAKNKDQGC---------------------FEDYVEGLRVFDKEGNGTVMG 105
Query: 117 EELQNVLSRLG 127
E+++VL LG
Sbjct: 106 AEIRHVLVTLG 116
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFF 62
L +F+ DKN D + L+EL +L+ G ++ +++E + +D +EFL F
Sbjct: 97 LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Query: 63 WKSI 66
K +
Sbjct: 157 MKGV 160
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 26/113 (23%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKV 74
D +S +EL ++ +G + EEL+ + G ++D +EFL K ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 75 DDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ E+ SDL F + D N DG+I +EL+ +L G
Sbjct: 93 SEEEL-----------------SDL---FRMXDKNADGYIDLDELKIMLQATG 125
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 48 STLDELFEELDKNGDGEVSFEEFQVLVKKI 77
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 45 STLDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 45 STLDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 44 STLDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 44 STLDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 29/126 (23%)
Query: 10 QRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV-------GKSSLDLNEFLFF 62
+ +FK++D NGD VS EE+ + + + E+L + G +D NEF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
+ SI Q+ + D ++ L + + D++GDG ++ EE+ +
Sbjct: 62 YGSIQGQD---LSDDKI------------------GLKVLYKLMDVDGDGKLTKEEVTSF 100
Query: 123 LSRLGL 128
+ G+
Sbjct: 101 FKKHGI 106
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 29/126 (23%)
Query: 10 QRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV-------GKSSLDLNEFLFF 62
+ +FK++D NGD VS EE+ + + + E+L + G +D NEF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
+ SI Q+ + D ++ L + + D++GDG ++ EE+ +
Sbjct: 62 YGSIQGQD---LSDDKI------------------GLKVLYKLMDVDGDGKLTKEEVTSF 100
Query: 123 LSRLGL 128
+ G+
Sbjct: 101 FKKHGI 106
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 44 STLDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLG 127
EAFN+ D N DGFI E+L ++L+ +G
Sbjct: 11 EAFNMIDQNRDGFIDKEDLHDMLASMG 37
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFFWKSIS 67
+ + F +D+N D + E+L+ +L +G + E LE + ++ +N +F
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGE 67
Query: 68 KQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
K N +D + AF FD GFI + L+ +L+ +G
Sbjct: 68 KLNGTDPEDV---------------------IRNAFACFDEEASGFIHEDHLRELLTTMG 106
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 45 STLDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDKNGD +VS EE L+++I
Sbjct: 43 STLDELFEELDKNGDGEVSFEEFQVLVKKI 72
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKS--------SLDL 56
TA+ + F+ D+ GD ++ + ++ +G + E+ +G +L
Sbjct: 5 QTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKF 64
Query: 57 NEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISC 116
+FL ++I+K + D +E VFD G+G +
Sbjct: 65 EQFLPMMQTIAKNKDQGC---------------------FEDYVEGLRVFDKEGNGTVMG 103
Query: 117 EELQNVLSRLG 127
E+++VL LG
Sbjct: 104 AEIRHVLVTLG 114
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.3 bits (72), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 30/129 (23%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEEL-----NWLLERIGVRLSLEELESFV----GKSSLD 55
T +L IF+ +DKNGD Q+ +EL E + V L ++ES V G + D
Sbjct: 61 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAV-FDLPQIESEVDAILGAADFD 119
Query: 56 LNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLE-AFNVFDLNGDGFI 114
N ++ + + ++ + K D LE AF FD +G+G I
Sbjct: 120 RNGYIDYSEFVTVAMDRK-------------------SLLSKDKLESAFQKFDQDGNGKI 160
Query: 115 SCEELQNVL 123
S +EL +V
Sbjct: 161 SVDELASVF 169
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 29/128 (22%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS--------LDLNEF 59
D + F D+ GD +++ ++ + +G + E+ +G S + EF
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 60 LFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEEL 119
L ++ + NNK D +E VFD G+G + EL
Sbjct: 67 LPMLQAAA---NNK------------------DQGTFEDFVEGLRVFDKEGNGTVMGAEL 105
Query: 120 QNVLSRLG 127
++VL+ LG
Sbjct: 106 RHVLATLG 113
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 32.3 bits (72), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSG 134
S+ EAF +FD GFI+ E LQ VL + G+ E +
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAA 43
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 99 LLEAFNVFDLNGDGFISCEELQNVLSRLG 127
L +AF FD G G+I LQ+ L LG
Sbjct: 81 LRQAFRTFDPEGTGYIPKAALQDALLNLG 109
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRL 126
D EAF +FD +GDG I+ EEL V+ L
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSL 39
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
D + F DK+GD +++EEL ++ + + EEL+ + G +++ +E
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 59 FL 60
FL
Sbjct: 68 FL 69
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
D LE F VFD G+G + EL++VL+ LG
Sbjct: 88 DYLEGFRVFDKEGNGKVMGAELRHVLTTLG 117
Score = 26.2 bits (56), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 13 FKQLDKNGDDQVSLEELNWLLERIGVRLSLEELES 47
F+ DK G+ +V EL +L +G +++ EE+E+
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVET 127
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 29/128 (22%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS--------LDLNEF 59
D + F D+ GD +++ ++ + +G + E+ +G S + EF
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 68
Query: 60 LFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEEL 119
L ++ + NNK D +E VFD G+G + EL
Sbjct: 69 LPMLQAAA---NNK------------------DQGTFEDFVEGLRVFDKEGNGTVMGAEL 107
Query: 120 QNVLSRLG 127
++VL+ LG
Sbjct: 108 RHVLATLG 115
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 29/125 (23%)
Query: 10 QRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV-------GKSSLDLNEFLFF 62
+ +FKQLD NGD VS EE+ + + E+L + G +DL EF F
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSS-KRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
++ +Q+ + D +V L + + D +GDG ++ EE+
Sbjct: 62 AAAVKEQD---LSDEKV------------------GLKILYKLMDADGDGKLTKEEVTTF 100
Query: 123 LSRLG 127
+ G
Sbjct: 101 FKKFG 105
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRL 126
D EAF +FD +GDG I+ EEL V+ L
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSL 39
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
D + F DK+GD +++EEL ++ + + EEL+ + G +++ +E
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 59 FL 60
FL
Sbjct: 68 FL 69
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 12 IFKQLDKNGDDQVSLEELNWLLERI 36
+F++LDKNGD +VS EE L+++I
Sbjct: 52 LFQELDKNGDGEVSFEEFQVLVKKI 76
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+L +F+ DKN D + L+EL +L+ G ++ +++E + +D +EFL
Sbjct: 96 ELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 62 FWKSI 66
F K +
Sbjct: 156 FMKGV 160
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKV 74
D +S +EL ++ +G + EEL+ + G ++D +EFL K ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 75 DDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+ E+ SDL F ++D N DG+I +EL+ +L G
Sbjct: 93 SEEEL-----------------SDL---FRMWDKNADGYIDLDELKIMLQATG 125
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLW 129
+L EAF FD + DG+I+C +L N + +G
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGYM 57
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 3 PLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFF 62
P +L+ F++ DK+ D ++ +L + +G + EL + +++L + F
Sbjct: 21 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 80
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
D V+ +L +AF FD NGDG IS EL+
Sbjct: 81 -------------DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREA 127
Query: 123 LSRL 126
+ +L
Sbjct: 128 MRKL 131
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLW 129
+L EAF FD + DG+I+C +L N + +G
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYM 43
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 3 PLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFF 62
P +L+ F++ DK+ D ++ +L + +G + EL + +++L + F
Sbjct: 7 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 66
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
D V+ +L +AF FD NGDG IS EL+
Sbjct: 67 -------------DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREA 113
Query: 123 LSRL 126
+ +L
Sbjct: 114 MRKL 117
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L EAF FD + DG+I+C +L N + +G
Sbjct: 11 ELREAFREFDKDKDGYINCRDLGNCMRTMG 40
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLW 129
+L EAF FD + DG+I+C +L N + +G
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYM 43
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 13/124 (10%)
Query: 3 PLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFF 62
P +L+ F++ DK+ D ++ +L + +G + EL + +++L + F
Sbjct: 7 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 66
Query: 63 WKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNV 122
D V+ +L +AF FD NGDG IS EL+
Sbjct: 67 -------------DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREA 113
Query: 123 LSRL 126
+ L
Sbjct: 114 MRAL 117
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEK 132
++ EAF++FD +G G I +EL+ + LG +K
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK 65
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 26/125 (20%)
Query: 8 DLQRIFKQLDKNGDDQVSLEEL--------NWLLERIGVRLSLEELESFVGKSSLDLNEF 59
+L IFK+LDKNGD Q+ +EL N+ E ++ EE+++ + + D N +
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGY 415
Query: 60 LFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEEL 119
+ + + IS + ++ E + L AFN+FD + G I+ EEL
Sbjct: 416 IEYSEFISVCMDKQILFSEER------------------LRRAFNLFDTDKSGKITKEEL 457
Query: 120 QNVLS 124
N+
Sbjct: 458 ANLFG 462
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L EAF + D + DGFI E+L+++ S LG
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLG 46
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 99 LLEAFNVFDLNGDGFISCEELQNVLSRLG 127
L AF++FD +G GFI + L+++L +G
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRL 126
+L +AF FD NGDG IS EL+ + +L
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKL 36
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLER-IGVRLSLEELESFV------GKSSLDLNEFL 60
+L+ F++ D NGD ++S EL + + +G ++ ++E + G +D EF+
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEK 132
++ EAF++FD +G G I +EL+ + LG +K
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKK 66
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L F +FD N DGFI EEL +L G
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATG 40
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS------LDLNEFLF 61
+L F+ DKN D + +EEL +L G + E++E + S +D +EFL
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 62 FWKSIS 67
+ +
Sbjct: 71 MMEGVQ 76
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEK 132
++ EAF++FD +G G I +EL+ + LG +K
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK 63
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 29/126 (23%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+++ F D +G + +EL + +G EE++ + G ++D EFL
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
+ + +++ ++L+AF +FD + G I+ ++L+
Sbjct: 89 MMTAKMGERDSR-----------------------EEILKAFRLFDDDNSGTITIKDLRR 125
Query: 122 VLSRLG 127
V LG
Sbjct: 126 VAKELG 131
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 1 MCPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSL 54
M L +L+ F+ LDK + ++ L W+L+ +G L+ +E+E+ + G ++
Sbjct: 1 MEDLDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTV 60
Query: 55 DLNEF 59
D EF
Sbjct: 61 DYEEF 65
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AFN++D+N DG+I+ EE+ +++ +
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAI 167
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGL 128
++ EAF++FD N DGF+ EL+ LG
Sbjct: 24 EIYEAFSLFDXNNDGFLDYHELKVAXKALGF 54
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AFN++D+N DG+I+ EE+ ++ +
Sbjct: 14 AFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L +F++LDK GD +VS EE L+++I
Sbjct: 44 STLDELFEELDKAGDGEVSFEEFQVLVKKI 73
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 10 QRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV-------GKSSLDLNEFLFF 62
+ +FK++D NGD VS EE+ + + + E+L + G +D NEF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 63 WKSI 66
+ SI
Sbjct: 62 YGSI 65
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEK 132
++ EAF++FD +G G I +EL+ + LG +K
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK 43
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 29/126 (23%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLF 61
+++ F D +G + +EL + +G EE++ + G ++D EFL
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 62 FWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQN 121
+ + +++ ++++AF +FD + G IS + L+
Sbjct: 69 MMTAKMGERDSR-----------------------EEIMKAFRLFDDDETGKISFKNLKR 105
Query: 122 VLSRLG 127
V LG
Sbjct: 106 VAKELG 111
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++ D++ DGF+S E+++ + +LG
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 48
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
+L AF +FD N DG+I EEL +L G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++ D++ DGF+S E+++ + +LG
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 36
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMI 141
++ EAF++FD +G G I +EL+ + LG +K + +MI
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE--EIKKMI 48
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 31/135 (22%)
Query: 5 HTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNE 58
+++ F D +G + ++EL + +G EE++ + G ++ +
Sbjct: 4 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 63
Query: 59 FLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEE 118
FL ++ Q ++ D E ++L+AF +FD + G IS +
Sbjct: 64 FL----TVMTQKMSEKDTKE-------------------EILKAFKLFDDDETGKISFKN 100
Query: 119 LQNVLSRLG--LWDE 131
L+ V LG L DE
Sbjct: 101 LKRVAKELGENLTDE 115
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++ D++ DGF+S E+++ + +LG
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 37
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++ D++ DGF+S E+++ + +LG
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 37
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF++ D++ DGF+S E+++ + +LG
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLG 34
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLGLW 129
++L AF D NGDG+++ ELQ + L +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAY 39
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLL 33
A+L+ FK+LD NGD V+ EL +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFM 33
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF + D N DGFI +L+ + S LG
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLG 53
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF + D N DGFI +L+ + S LG
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLG 53
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 100 LEAFNV----FDLNGDGFISCEELQNVLSRLGL 128
LEAF V FDLNG+G I L+ +L +LG+
Sbjct: 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV 79
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF + D N DGFI +L+ + S LG
Sbjct: 20 EMKEAFTMIDQNRDGFIDINDLKEMFSSLG 49
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRLG 127
AF++FD +G G IS +EL V+ LG
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
EAF +FD + +G IS EL V+ LGL
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGL 41
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEEL 29
T +L +IF+QLD NGD Q+ +EL
Sbjct: 313 TKELTQIFRQLDNNGDGQLDRKEL 336
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRLG 127
AF++FD +G G IS +EL V+ LG
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLG 39
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
FN++D+N DG+I+ EE+ +++ +
Sbjct: 97 TFNLYDINKDGYINKEEMMDIVKAI 121
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRLG 127
AF++FD +G G IS +EL V+ LG
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEEL 29
T +L +IF+QLD NGD Q+ +EL
Sbjct: 39 TKELTQIFRQLDNNGDGQLDRKEL 62
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
FN++D+N DG+I+ EE+ +++ +
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAI 154
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRL 126
+L EAF ++D G+G+IS + ++ +L+ L
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAEL 32
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
+L+ F+ DK G+ +S + + +L + LS E+L++ + G ++D EF+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 100 LEAFNVFDLNGDGFISCEELQNVLSR 125
L F FD++G+G IS EEL+ + R
Sbjct: 132 LIPFKFFDIDGNGKISVEELKRIFGR 157
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
FN++D+N DG+I+ EE+ +++ +
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRL 126
+L EAF ++D G+G+IS + ++ +L+ L
Sbjct: 92 ELREAFRLYDKEGNGYISTDVMREILAEL 120
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 8 DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFL 60
+L+ F+ DK G+ +S + + +L + LS E+L++ + G ++D EF+
Sbjct: 92 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
FN++D+N DG+I+ EE+ +++ +
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
D EAF V D N DG I ++L+ + +G
Sbjct: 26 DFKEAFTVIDQNADGIIDKDDLRETFAAMG 55
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
D EAF V D N DG I ++L+ + +G
Sbjct: 8 DFKEAFTVIDQNADGIIDKDDLRETFAAMG 37
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++ EAF + D N DGFI +L+ S LG
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLG 32
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGL 128
++ EAF++FD +G G I +EL+ LG
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAXRALGF 62
>pdb|3K6S|A Chain A, Structure Of Integrin Alphaxbeta2 Ectodomain
pdb|3K6S|C Chain C, Structure Of Integrin Alphaxbeta2 Ectodomain
pdb|3K6S|E Chain E, Structure Of Integrin Alphaxbeta2 Ectodomain
pdb|3K6S|G Chain G, Structure Of Integrin Alphaxbeta2 Ectodomain
pdb|3K71|A Chain A, Structure Of Integrin Alphax Beta2 Ectodomain
pdb|3K71|C Chain C, Structure Of Integrin Alphax Beta2 Ectodomain
pdb|3K71|E Chain E, Structure Of Integrin Alphax Beta2 Ectodomain
pdb|3K71|G Chain G, Structure Of Integrin Alphax Beta2 Ectodomain
pdb|3K72|A Chain A, Structure Of Integrin Alphax Beta2
pdb|3K72|C Chain C, Structure Of Integrin Alphax Beta2
Length = 1095
Score = 27.7 bits (60), Expect = 2.3, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 3 PLHTADLQRIFKQ---LDKN-GDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNE 58
P+ AD QR F +KN G D + + L G+ S L+S + S+L+LN
Sbjct: 732 PMLAADAQRYFTASLPFEKNCGADHICQDNL-------GISFSFPGLKSLLVGSNLELNA 784
Query: 59 FLFFW 63
+ W
Sbjct: 785 EVMVW 789
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 7 ADLQRIFKQLDKNGDDQVSLEELNWLLERI 36
+ L + +++DKNGD +VS EE ++++I
Sbjct: 45 STLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AF ++DLN DG+I+ +E+ +++ +
Sbjct: 104 AFELYDLNHDGYITFDEMLTIVASV 128
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLG 127
EAF +FD + D ++ EEL V+ LG
Sbjct: 18 EAFQLFDKDNDNKLTAEELGTVMRALG 44
>pdb|2POK|A Chain A, Crystal Structure Of A M20 Family Metallo Peptidase From
Streptococcus Pneumoniae
pdb|2POK|B Chain B, Crystal Structure Of A M20 Family Metallo Peptidase From
Streptococcus Pneumoniae
Length = 481
Score = 27.3 bits (59), Expect = 2.8, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 9 LQRIFKQLDKNGDDQVSL 26
L++I KQLDKNG D+V L
Sbjct: 369 LEKIRKQLDKNGFDKVEL 386
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 102 AFNVFDLNGDGFISCEELQNVL---SRLGLWDEKSGKDCTRMI 141
AF VFD++ DG I+ EL +VL ++ G E+ +MI
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMI 172
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AFN++D+N DG I+ EE+ ++ +
Sbjct: 170 AFNLYDINKDGCITKEEMLAIMKSI 194
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRLG 127
AF++FD +G G IS + L V+ LG
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLG 50
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
D EAF V D N DG I ++L+ + +G
Sbjct: 13 DFKEAFTVIDQNRDGIIDKDDLRETFAAMG 42
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLGL 128
+L+E F D +G G IS EL LS G+
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNAALSSAGV 58
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEEL 29
T +L IF ++DKNGD Q+ EL
Sbjct: 358 TKELTAIFHKMDKNGDGQLDRAEL 381
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEEL 29
T +L IF ++DKNGD Q+ EL
Sbjct: 357 TKELTAIFHKMDKNGDGQLDRAEL 380
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 6 TADLQRIFKQLDKNGDDQVSLEEL 29
T +L IF ++DKNGD Q+ EL
Sbjct: 334 TKELTAIFHKMDKNGDGQLDRAEL 357
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AF+++DL+G+G+IS E+ ++ +
Sbjct: 104 AFSMYDLDGNGYISKAEMLEIVQAI 128
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 10 QRIFKQLDKNGDDQVSLEEL 29
++IF+Q+D N D ++SLEE
Sbjct: 150 EKIFRQMDTNRDGKLSLEEF 169
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 102 AFNVFDLNGDGFISCEELQNVL 123
AF VFD++ DG I+ EL ++L
Sbjct: 127 AFRVFDVDNDGEITTAELAHIL 148
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
E + FDLNG+G I L+ +L +LG+
Sbjct: 55 EKYMEFDLNGNGDIDIMSLKRMLEKLGV 82
>pdb|3SP1|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase (Cyss) From
Borrelia Burgdorferi
pdb|3SP1|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase (Cyss) From
Borrelia Burgdorferi
Length = 501
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 22 DQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN 57
D V L LN L+ G + E +SFV K S DLN
Sbjct: 365 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLN 400
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
D ++AF VFD G +S +L+ +L+ LG
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLG 35
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 101 EAFNVFDLNGDGFISCEELQNVLSRLGL 128
E + FDLNG+G I L+ +L +LG+
Sbjct: 36 EKYMEFDLNGNGDIDIMSLKRMLEKLGV 63
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 13 FKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSS 53
+ + D NG+ + + L +LE++GV + EL+ +G+ S
Sbjct: 38 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVS 78
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
D ++AF VFD G +S +L+ +L+ LG
Sbjct: 84 DFVKAFQVFDKESTGKVSVGDLRYMLTGLG 113
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AF ++D++ DG+IS EL VL +
Sbjct: 81 AFRIYDMDKDGYISNGELFQVLKMM 105
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AF ++D++ DG+IS EL VL +
Sbjct: 80 AFRIYDMDKDGYISNGELFQVLKMM 104
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AF ++D++ DG+IS EL VL +
Sbjct: 95 AFRIYDMDKDGYISNGELFQVLKMM 119
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 102 AFNVFDLNGDGFISCEELQNVLSRL 126
AF ++D++ DG+IS EL VL +
Sbjct: 94 AFRIYDMDKDGYISNGELFQVLKMM 118
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 32/59 (54%)
Query: 9 LQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFFWKSIS 67
L+ +FK +D + ++ +EL L+R+G L E++ + + +D + + + + I+
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 83
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLGL 128
++ EAF++FD N G I EL+ + LG
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGF 38
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 10 QRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLN 57
+R+F++ DKN D ++SL+E + + E++ F + +D N
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGN 51
>pdb|1XZ0|A Chain A, Crystal Structure Of Cd1a In Complex With A Synthetic
Mycobactin Lipopeptide
pdb|1XZ0|C Chain C, Crystal Structure Of Cd1a In Complex With A Synthetic
Mycobactin Lipopeptide
Length = 279
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLS 41
C LH+ + F QL G D VS + +WL + ++
Sbjct: 102 CELHSGKVSGSFLQLAYQGSDFVSFQNNSWLPYPVAGNMA 141
>pdb|1ONQ|A Chain A, Crystal Structure Of Cd1a In Complex With A Sulfatide
pdb|1ONQ|C Chain C, Crystal Structure Of Cd1a In Complex With A Sulfatide
Length = 283
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLS 41
C LH+ + F QL G D VS + +WL + ++
Sbjct: 102 CELHSGKVSGSFLQLAYQGSDFVSFQNNSWLPYPVAGNMA 141
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 13 FKQLDKNGDDQVSLEELNWLLERIGVRLSLEELE 46
F+ DK+ + + EL ++L +G +LS EE++
Sbjct: 82 FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMD 115
>pdb|3R0X|A Chain A, Crystal Structure Of Selenomethionine Incorporated Apo
D-Serine Deaminase From Salmonella Tyhimurium
Length = 448
Score = 25.8 bits (55), Expect = 7.5, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFVG 50
DDQ + L WL + G+RL L G
Sbjct: 362 DDQTXYDXLGWLAQEEGIRLEPSALAGXAG 391
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 106 FDLNGDGFISCEELQNVLSRLGLWDEKSG 134
FD +G G++ +ELQN++ L +K+G
Sbjct: 25 FDADGSGYLEGKELQNLIQELLQARKKAG 53
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWL 32
C + + R F+ LDKNG Q+ + WL
Sbjct: 137 CLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 167
>pdb|2NV4|A Chain A, Crystal Structure Of Upf0066 Protein Af0241 In Complex
With S-Adenosylmethionine. Northeast Structural Genomics
Consortium Target Gr27
pdb|2NV4|B Chain B, Crystal Structure Of Upf0066 Protein Af0241 In Complex
With S-Adenosylmethionine. Northeast Structural Genomics
Consortium Target Gr27
Length = 147
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 97 SDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMI 141
SD + +FD DG E L++++ + W +K+ +D R++
Sbjct: 26 SDAVSEIAIFDEYADGLHKIENLRHII--VLYWXDKASRDKLRVV 68
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWL 32
C + + R F+ LDKNG Q+ + WL
Sbjct: 148 CLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 178
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 2 CPLHTADLQRIFKQLDKNGDDQVSLEELNWL 32
C + + R F+ LDKNG Q+ + WL
Sbjct: 148 CLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 178
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 98 DLLEAFNVFDLNGDGFISCEELQNVLSRLG 127
++L+AF +FD + G I+ ++L+ V LG
Sbjct: 10 EILKAFRLFDDDNSGTITIKDLRRVAKELG 39
>pdb|3R0Z|A Chain A, Crystal Structure Of Apo D-Serine Deaminase From
Salmonella Typhimurium
Length = 448
Score = 25.8 bits (55), Expect = 9.3, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 21 DDQVSLEELNWLLERIGVRLSLEELESFVG 50
DDQ + L WL + G+RL L G
Sbjct: 362 DDQTMYDMLGWLAQEEGIRLEPSALAGMAG 391
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,765,332
Number of Sequences: 62578
Number of extensions: 123798
Number of successful extensions: 1111
Number of sequences better than 100.0: 255
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 479
Number of HSP's gapped (non-prelim): 489
length of query: 141
length of database: 14,973,337
effective HSP length: 89
effective length of query: 52
effective length of database: 9,403,895
effective search space: 489002540
effective search space used: 489002540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)