BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044807
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 63/87 (72%)
Query: 10 TAVAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPEC 69
T P+ ++ GLD+ TI+S++K+ L ES+ LPG N C ICLSEY S+ET++C+PEC
Sbjct: 213 TTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPEC 272
Query: 70 KHCFHAECIDEWPRLNDKCPVCINSAT 96
HCFH +CIDEW +++ CPVC NS +
Sbjct: 273 DHCFHVQCIDEWLKIHSSCPVCRNSRS 299
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 4 QLNSTPTAVAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSS-ACSICLSEYLSQET 62
Q N A+ P I+ GLDE I+S++K L ES+ LPG N C ICLSEY S+ET
Sbjct: 273 QRNVAIAALQPNEVIVTTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKET 332
Query: 63 IKCIPECKHCFHAECIDEWPRLNDKCPVCINSATPVH 99
++CIPEC HCFH+ECID W +++ CP+C NS +P
Sbjct: 333 VRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSPAR 369
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 14 PQPPIMIMGLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHC 72
P + +GLDE TI+S++K+ L ES+ LP G N C ICLSEY ++ET++C+PEC+HC
Sbjct: 290 PSNEVARIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHC 349
Query: 73 FHAECIDEWPRLNDKCPVCINSATPVH 99
FH ECID W +L+ CPVC ++ +P+
Sbjct: 350 FHTECIDAWLKLHSSCPVCRSNPSPLR 376
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 11 AVAPQPPIMIM---GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIP 67
A Q P +M GLD+ TI++F+K+ L ES+ L G N C ICLSEY S+ET++ IP
Sbjct: 278 ATVMQQPREVMARRGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIP 337
Query: 68 ECKHCFHAECIDEWPRLNDKCPVCINS 94
EC HCFH ECID W +++ CP+C NS
Sbjct: 338 ECDHCFHVECIDVWLKIHGSCPLCRNS 364
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 56/77 (72%)
Query: 21 MGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
+GLD I+S+ ++VL +S+ LP PN+ CSICL +Y ++E ++CIPEC HCFH +C+DE
Sbjct: 65 LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDE 124
Query: 81 WPRLNDKCPVCINSATP 97
W R + CP+C NS P
Sbjct: 125 WLRTSATCPLCRNSPAP 141
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 57/81 (70%)
Query: 14 PQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCF 73
P+ + GLD+ TI+ ++ + L ES+ PG N C ICLSEY+S+ET++ IPEC HCF
Sbjct: 280 PREVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCF 339
Query: 74 HAECIDEWPRLNDKCPVCINS 94
HA+CID W +++ CP+C NS
Sbjct: 340 HAKCIDVWLKIHGSCPLCRNS 360
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSAC-SICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLDE TI+S+ K++ E+K GP +++C +ICL +Y + ++ +P+C H FH +CID
Sbjct: 121 GLDEDTIQSYPKILYSEAK---GPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 177
Query: 81 WPRLNDKCPVCINSATPV 98
W RLN CPVC S P
Sbjct: 178 WLRLNPTCPVCRTSPLPT 195
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 18 IMIMGLDECTIKSFQKL--------VLEESKCLPGPNS-SACSICLSEYLSQETIKCIPE 68
+++ GLD I S+ K V+ G + CSICL EY+ +E ++ +PE
Sbjct: 95 VVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPE 154
Query: 69 CKHCFHAECIDEWPRLNDKCPVCINSATP 97
CKH FH C+D W +LN CPVC NS P
Sbjct: 155 CKHYFHVYCLDAWLKLNGSCPVCRNSPLP 183
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 18 IMIMGLDECTIKSFQKLVLEESKC-----LPGPNSSACSICLSEYLSQETIKCIPECKHC 72
+ ++GL E IK F KL EE++ +S CSICL++Y + I+ +P+C H
Sbjct: 92 VEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHL 151
Query: 73 FHAECIDEWPRLNDKCPVCINSATP 97
FH C+D W RL+ CPVC S P
Sbjct: 152 FHDNCVDPWLRLHPTCPVCRTSPLP 176
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 19 MIMGLDECTIKSFQKLVLEESKCLPGPN------SSACSICLSEYLSQETIKCIPECKHC 72
+++GLD+ I S+ K + + + CSICL EY E ++ +PECKH
Sbjct: 101 VVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHY 160
Query: 73 FHAECIDEWPRLNDKCPVCINSATP 97
FH C+D W +LN CPVC NS P
Sbjct: 161 FHLCCLDAWLKLNGSCPVCRNSPLP 185
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCL-PGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD IKSF V E++ + PG C +CL+E+ ET++ +P C H FHA+C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 81 WPRLNDKCPVCINSATP 97
W + CP+C P
Sbjct: 116 WLSHSSTCPICRAKVVP 132
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GL++ I+SF + E K L G C+ICLSE+ QET++ +P C H FHA CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 81 WPRLNDKCPVC 91
W CPVC
Sbjct: 154 WLSSWSTCPVC 164
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD I++F K L G + CS+CL+E+ ET++ IP+C H FH CID
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 81 WPRLNDKCPVCINSATPVHADYV 103
W R + CP+C PV + +
Sbjct: 175 WLRSHTTCPLCRADLIPVPGESI 197
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD I++F K L G + C +CL+E+ ET++ IP+C H FH CID
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 81 WPRLNDKCPVCINSATPVHADYVN 104
W R CP+C + PV + V+
Sbjct: 149 WLRSQTTCPLCRANLVPVPGESVS 172
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 13 APQPPIMIM-------GLDECTIKSFQKLVLEESKCLPG-----PNSSACSICLSEYLSQ 60
+ Q P+MI GLDE I++ ++ + G NS CS+CL+E+
Sbjct: 85 SDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQED 144
Query: 61 ETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSAT 96
E ++ IP C H FH +CID W + N CP+C S +
Sbjct: 145 EKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVS 180
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
G+ +KSFQ + LPG ++ C+ICLSE++++E +K +P C H FH CID+W
Sbjct: 104 GVKRKALKSFQTVSYSTELNLPGLDTE-CAICLSEFVAEERVKLLPTCHHGFHVRCIDKW 162
Query: 82 PRLNDKCPVC 91
+ CP C
Sbjct: 163 LSSHSSCPTC 172
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GL++ ++SF + E K L G C+ICLSE++ +ET++ +P C H FHA CID
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 81 WPRLNDKCPVC 91
W CP C
Sbjct: 154 WLSSQSTCPAC 164
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GL + I SF + + K L G C+ICL+E+ +ET++ +P C H FHA CID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 81 WPRLNDKCPVCINSATP 97
W CPVC S P
Sbjct: 159 WLSSRSTCPVCRASLPP 175
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
GLD+ IK L++ + N + CSICL E+ E+++ +P+C H FH CID W
Sbjct: 127 GLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRW 186
Query: 82 PRLNDKCPVC 91
+ + CP+C
Sbjct: 187 LKSHSNCPLC 196
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
GLD I+SF V S + + C+ICLSE+ ++T++ I C+H FH+ CID W
Sbjct: 77 GLDPFIIRSFP--VFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLW 134
Query: 82 PRLNDKCPVC 91
L+ CPVC
Sbjct: 135 FELHKTCPVC 144
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD TI++F V E K G + C+ICL+E+ ET++ +P+C H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 81 WPRLNDKCPVC 91
W + + CPVC
Sbjct: 155 WLQGHVTCPVC 165
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
G+D+ I+SF + E K G C+ICL E+ +E ++ +P C H FHA CIDE
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 81 WPRLNDKCPVC 91
W CPVC
Sbjct: 151 WLSSRSTCPVC 161
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD +++F + + K G C+ICL+E+ ET++ +P+C H FH CID
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158
Query: 81 WPRLNDKCPVC 91
W + CPVC
Sbjct: 159 WLEAHVTCPVC 169
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 RQQQLNSTPTAVAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQ 60
R+ +V QPP GLD I S V+ + G + C++CLS +
Sbjct: 56 RRSAFQDLSFSVVSQPPKR--GLDSLVIASLPTFVVGIKNDVAG---TECAVCLSLLEEK 110
Query: 61 ETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSATPVH 99
+ + +P CKH FH C+D W CPVC A P H
Sbjct: 111 DNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSH 149
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 23 LDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWP 82
LDE IKS V + K SS CS+CLSE+ E+++ +P+C H FH CID W
Sbjct: 134 LDESLIKSIT--VYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 191
Query: 83 RLNDKCPVC 91
+ + CP+C
Sbjct: 192 KSHSNCPLC 200
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 11 AVAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECK 70
A + + P+ GLD ++S +V KC + C++CLS+ + + + +P C
Sbjct: 84 AQSQEDPLHNAGLDSKILQSIHVVVF---KCTDFKDGLECAVCLSDLVDGDKARVLPRCN 140
Query: 71 HCFHAECIDEWPRLNDKCPVCINSATPV 98
H FH +CID W + + CP+C N+ V
Sbjct: 141 HGFHVDCIDMWFQSHSTCPLCRNTVGSV 168
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD I++F + E K + G C++CL E+ ET++ +P C H FHA+C+D
Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDV 165
Query: 81 WPRLNDKCPVC 91
W + CP+C
Sbjct: 166 WLSEHSTCPLC 176
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 22 GLDECTIKSFQKLV---LEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECI 78
GLD ++SF ++ESK G C+ICL+E ET++ +P C H FH +CI
Sbjct: 95 GLDNAVVESFPVFAYSSVKESKI--GSKDLECAICLNELEDHETVRLLPICNHLFHIDCI 152
Query: 79 DEWPRLNDKCPVCINSAT 96
D W + CPVC ++ T
Sbjct: 153 DTWLYSHATCPVCRSNLT 170
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSA-CSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GLD+ I+S L L L G CS+CLS++ S E ++ +P+C+H FH CID+
Sbjct: 97 GLDKTAIES---LPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQ 153
Query: 81 WPRLNDKCPVC 91
W + CP+C
Sbjct: 154 WLEQHATCPLC 164
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 22 GLDECTIKSFQKLVLEESKCLPG-PNSSACSICLSEYLSQETIKCIPECKHCFHAECIDE 80
GL+E IKS + + + K G + S CS+CLSE+ E+++ +P+C H FH CID
Sbjct: 116 GLNESMIKS---ITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172
Query: 81 WPRLNDKCPVC 91
W + + CP+C
Sbjct: 173 WLKSHSNCPLC 183
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 47 SSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
S CS+CLSE+ +E ++ IP C H FH +CID W + N CP+C
Sbjct: 135 SQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLC 179
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 20 IMGLDECTIKSFQKLVLEESKCLP-GPNSSACSICLSEYLSQETIKCIPECKHCFHAECI 78
+ GLDE I SF + E K G C++C+ E+ ET++ +PEC H FHA+C+
Sbjct: 65 VRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCV 124
Query: 79 DEWPRLNDKCPVCINS--ATPVHADYVNP 105
W + CP+C P Y+NP
Sbjct: 125 SVWLSDHSTCPLCRVDLCLQPGERSYLNP 153
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
GLD+ I+S K L CS+CLS++ E ++ +P+C+H FH CID+W
Sbjct: 98 GLDKKAIESLPFFRFSALKGLK--QGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQW 155
Query: 82 PRLNDKCPVCIN 93
+ CP+C N
Sbjct: 156 LEQHATCPLCRN 167
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 2 QQQLNSTPTAVAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQE 61
+ N + P P +GLD I+SF E + + CSICL+E++ +
Sbjct: 110 HRNRNRPSNLIQPSNPPENLGLDSKIIESFP----EYPYSVKDHGTDQCSICLTEFMDDD 165
Query: 62 TIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
TI+ I C H FH CID W + CPVC
Sbjct: 166 TIRLISTCNHSFHTICIDLWFEGHKTCPVC 195
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGP--------NSSACSICLSEYLSQETIKCIPECKHCF 73
GLD+ IK+ + + C P N C++CL E+ + ++ +P C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 74 HAECIDEWPRLNDKCPVC 91
H ECIDEW R + CP+C
Sbjct: 180 HLECIDEWLRSHPNCPLC 197
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
GL + S + + C G CSICLSE + + + +P+C H FH ECID W
Sbjct: 102 GLTSFELSSLPIVFFRQDSCKDGLE---CSICLSELVKGDKARLLPKCNHSFHVECIDMW 158
Query: 82 PRLNDKCPVCINS 94
+ + CP+C N+
Sbjct: 159 FQSHSTCPICRNT 171
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGP-----NSSACSICLSEYLSQETIKCIPECKHCFHAE 76
GL + ++S + ++ G +S+ C+ICL+++ E I+ +P C H FH E
Sbjct: 69 GLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVE 128
Query: 77 CIDEWPRLNDKCPVCINSATPVHAD 101
CID+W CP C TPV D
Sbjct: 129 CIDKWLVSRSSCPSCRRILTPVRCD 153
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 50 CSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSATP 97
C++CL+ + E ++ +P+CKH FH EC+D W + CP+C P
Sbjct: 146 CAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDP 193
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 48 SACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
S C++CL E+ +++ ++ +P+C H FH ECID W N CP+C
Sbjct: 120 SDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLC 163
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 46 NSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSATPVHADYVNP 105
+++ CS+CL E+ E+++ +P C H FH +CID W + + CP+C + T V +P
Sbjct: 153 HTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASP 212
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 8 TPTAVAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIP 67
+ + V +P GLD ++S V +K N C ICLS++ ET+K IP
Sbjct: 101 STSVVVSRPYSFRRGLDSQAVRSLP--VYRYTKAAKQRNED-CVICLSDFEEGETVKVIP 157
Query: 68 ECKHCFHAECIDEWPRLNDKCPVC 91
C H FH +C+D W CP+C
Sbjct: 158 HCGHVFHVDCVDTWLSSYVTCPLC 181
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 46 NSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
NS C++CLS++ ++ ++ +P C H FHA+CID W N CP+C
Sbjct: 113 NSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLC 158
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 48 SACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSATPVHAD 101
+ C +C S++ S++ ++ +P C H FHA+C+D+W + N CP+C A+ VH D
Sbjct: 394 TLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWLKTNRTCPICRADASEVHRD 446
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 45 PNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
P +CS+CL ++ ET++ +P C H FH CID+W R + CP+C
Sbjct: 171 PEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLC 217
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 42 LPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
LP P + C++CL + +++ ++ +P CKH FH +C+D W L CP+C
Sbjct: 319 LPEPGTETCAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLC 367
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
G+ + ++ F + LPG + C ICLS+++S E ++ +P+C H FH CID+W
Sbjct: 108 GIKKKALRMFPVVSYSPEMNLPGLDEE-CVICLSDFVSGEQLRLLPKCNHGFHVRCIDKW 166
Query: 82 PRLNDKCPVCIN 93
+ + CP C N
Sbjct: 167 LQQHLTCPKCRN 178
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 22 GLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEW 81
G+++ ++ F + LPG C ICLS+++S E I+ +P+C H FH CID+W
Sbjct: 109 GINKKALRMFPVVSYSPEMNLPGLGEE-CVICLSDFVSGEQIRMLPKCHHGFHVRCIDKW 167
Query: 82 PRLNDKCPVC 91
+ + CP C
Sbjct: 168 LQQHLTCPKC 177
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 42 LPGPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVC 91
LP P + C++CL + +++ ++ +P CKH FH +C+D W L CP+C
Sbjct: 317 LPDPGAETCAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLC 365
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 1 RQQQLNSTPTA--VAPQPPIMIMGLDECTIKSFQKLVLEESKCLPGPNSSACSICLSEYL 58
R N T A P GL+ IKS L + CS+CLSE+
Sbjct: 28 RSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTAL---FAMECSVCLSEFK 84
Query: 59 SQETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSATPV 98
E+ + +P CKH FH CID W + CP+C + P
Sbjct: 85 DNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPF 124
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 44 GPNSSACSICLSEYLSQETIKCIPECKHCFHAECIDEWPRLNDKCPVCINSATPVHAD 101
G +S+ C+IC++E+ E I+ +P C H FH CID+W CP C PV D
Sbjct: 107 GDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCD 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,514,832
Number of Sequences: 539616
Number of extensions: 1512534
Number of successful extensions: 3770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 3369
Number of HSP's gapped (non-prelim): 509
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)