BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044813
(352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 167/351 (47%), Gaps = 49/351 (13%)
Query: 9 GGSSVPVKFPFQIINNLESLNPRCRYPRFELLCSR-NKTILMLPRSGLFAVRNIDYNLQT 67
G VP++FPF C +P F LLC+ N T+L LP SG F V+ IDY Q
Sbjct: 40 GPLEVPIRFPF------------CDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQ 87
Query: 68 LDINDPLNCLPKRFLDNFSLEDSPFEQKIYGNFTFLNCSSSSSSSNHVPEHHRTVACLST 127
+ INDP NCL KR L F++ SPF + +TFL C + +P + ++ CLS
Sbjct: 88 IYINDPENCLAKRLL-TFNISGSPFSPRFDTLYTFLTCPNELV----LPSWYPSIPCLSN 142
Query: 128 ENYTVLAVPSRFYNETKLPMLPVPSSCEVIRADVMVPVSGGYWNG-----LEDDIRLSWS 182
+ A + E+ LP SC++++ + VP + L + L W+
Sbjct: 143 STSSFFATSNFALAESMLP------SCQIVK-RIYVPADSPFAETRFSSYLNQSLLLEWN 195
Query: 183 DPHCAPCEYRGEVCKFTNDDTSLV--VGCSNSGKESVKYDAIIIGIGFGTPGALFIIALG 240
P+C CE C F N + V G SG S A++I + LF+
Sbjct: 196 SPNCRGCEIDYLRCGFKNKASPEVKCFGAKKSGHLSRAVVAVLICLSIIGAVILFVT--- 252
Query: 241 CYLCSKVWTHDPQRHRRRQPTTELSTSTVVAS---------LDKPTIESYPKTIVGVSGR 291
C + H+ R RR + +TV+ LD+ TIE Y +G S R
Sbjct: 253 ---CIAIRIHNTPR--RRHWAVPAAAATVMQQPREVMATRGLDQSTIEKYKTMELGESRR 307
Query: 292 QPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
P N CPICLS Y K+T+R IP+C+H FHA CID WL+++ SCP+CR
Sbjct: 308 PPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCR 358
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 167/340 (49%), Gaps = 15/340 (4%)
Query: 9 GGSSVPVKFPFQIINNLESLNPRCRYPRFELLCSRN-KTILMLPRSGLFAVRNIDYNLQT 67
G V V+FPF +++ L C + F L C+ + KT L LP SG F VR IDY Q
Sbjct: 32 GRDDVHVRFPFWLLSKQPEL---CGHAGFNLQCTASPKTALKLPNSGTFLVREIDYLSQQ 88
Query: 68 LDINDPLNCLPKRFLDNFSLEDSPFEQKIYGNFTFLNCSSSSSSSNHVPEHHRTVACLST 127
+ + DP NCL ++ L F + SPF ++TFL+C + + S+ ++ CL
Sbjct: 89 IRLYDPENCLARKLL-TFDISRSPFSALYLVSYTFLSCPNEVAKSSRF----DSIPCLGN 143
Query: 128 ENYTVLAVPSRFYNETKLPMLPVPSSCEVIRADVMVPVSGGYWNGLED-DIRLSWSDPHC 186
+ LA S ++ LP + + +V + ++ + + D D+ L W P C
Sbjct: 144 STTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDSPSC 203
Query: 187 APCEYRGEVCKFTNDDTSLVVGC---SNSGKESVKYDAIIIGIGFGTPGALFIIALGCYL 243
+ CE C F +TSL V C NSG + II + P +F + +
Sbjct: 204 SDCERDFLRCGF-RSNTSLQVKCFPFENSGYNTEPQVLKIILLSIIGPLTIFATCIAVGV 262
Query: 244 CSKVWTHDPQRHRRRQPTTELSTSTVVASLDKPTIESYPKTIVGVSGRQPKPNDN-TCPI 302
C+ + + + V LD+ IESY KT +G S R P ND+ CPI
Sbjct: 263 CTSERFASLIQRNVAIAALQPNEVIVTTGLDESIIESYKKTELGESRRLPGNNDDIVCPI 322
Query: 303 CLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
CLS Y K+T+R IP+C+H FH+ CID WL+++ SCP+CR
Sbjct: 323 CLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCR 362
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 168/353 (47%), Gaps = 43/353 (12%)
Query: 12 SVPVKFPFQIINNLESLNPR-CRYPRFELLCSRNK-TILMLPRSGLFAVRNIDYNLQTLD 69
SV +FPF + S P C Y F L+C + T L LP+S F V+ IDY Q +
Sbjct: 38 SVVARFPFSLF----SYQPESCGYSGFNLICKDDANTTLKLPKSEPFLVKEIDYETQRIR 93
Query: 70 INDPLNCLPKRFLDNFSLEDSPFEQKIYGNFTFLNCSSSSSSSNHVPEHHRTVACLSTEN 129
+NDP NCL +R L NF SPF N+TFL C + ++ R + CL
Sbjct: 94 LNDPENCLARRLL-NFDPSGSPFSFLRSRNYTFLICPKEA----NITASFRAIDCLGNTT 148
Query: 130 YTVLAVPSRFYNETKLPMLPVPSSCEVIRADVMVPVS-----GGYWNGLED-DIRLSWSD 183
+ V +F N + +PSSC + + + +P S Y +G D+ L W
Sbjct: 149 SSFFVV--QFEN-----LGSMPSSCHIFKI-LPLPFSWFVAYTTYPDGQNSRDMWLKWDS 200
Query: 184 PHCAPCEYR-GEVCKFTNDDTSLVV-------GCSNSGKESVKYDAIIIGIGFGTPGALF 235
P C CE R C F N+ + V G N+G + +K I+ + P
Sbjct: 201 PDCRDCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGLQVLK----IMCLSLVGPLTAL 256
Query: 236 IIALGCYLCS--KVWTHDPQRHRRR---QPTTELSTSTVVASLDKPTIESYPKTIVGVSG 290
+G +CS +V + Q R T++ S LD+ TIESY K +G S
Sbjct: 257 TFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESR 316
Query: 291 RQPK-PNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
R P ND CPICLS Y K+T+R +P+C H FH CID WL++++SCPVCR
Sbjct: 317 RLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCR 369
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 169/359 (47%), Gaps = 61/359 (16%)
Query: 9 GGSSVPVKFPFQIINNLESLNPRCRYPRFELLCSR-NKTILMLPRSGLFAVRNIDYNLQT 67
G VP++FPF C + RF L C+ NKT+L LP SG F VR+IDY Q
Sbjct: 40 GPLEVPIRFPF------------CNHARFNLHCTDLNKTVLELPMSGTFLVRDIDYRRQK 87
Query: 68 LDINDPLNCLPKRFLDNFSLEDSPFEQKIYGNFTFLNCSSSSSSSNHVPEHHRTVACLST 127
+ INDP NCL KR L F++ SPF +TFL+C + +P + ++ CLS
Sbjct: 88 IYINDP-NCLAKRLL-TFNISGSPFSPHFDILYTFLSCPNEVV----LPSWYPSIPCLSN 141
Query: 128 ENYTVLAVPSRFYNETKLPMLPVPSSCEVIRADVMVPVSGGYWNGL------EDDIRLSW 181
+ A + ++ LP SC++++ + VP + + + L W
Sbjct: 142 STSSFFATSNYSLAQSMLP------SCQIVK-RLHVPATSPFGETRFSSDLNNQSLLLEW 194
Query: 182 SDPHC-APCEYRGEVCKFTNDDTSLVVGCSNSGKESVKYDA--IIIGIGFGTPGALFIIA 238
+ P C A C G K S + CS S YD+ + I + + +I+
Sbjct: 195 ALPDCRAKC--LGATKKTGTIYNSNIFSCSFS----FLYDSRELFINGNLSSGVLVLVIS 248
Query: 239 LGCYL------CSKVWTHDPQRHRRRQPTTELSTSTVVAS---------LDKPTIESYPK 283
L C + +D +R + ++ +TV+ LD+ TIE++ K
Sbjct: 249 LSAVTVFVFPTCIAIRLYDSERF-----DSAIAAATVMQQPREVMARRGLDQSTIETFKK 303
Query: 284 TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
+G S R N CPICLS Y K+T+R IP+C+H FH CID WL+++ SCP+CR
Sbjct: 304 MELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCR 362
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 28/306 (9%)
Query: 53 SGLFAVRNIDYNLQTLDINDPLNCLPKRFLDNFSLEDSPFEQKIYGNFTFLNCSSSSSSS 112
SG F V I+Y Q + I+DP NC+ KR L F+ SPF +TFL C +
Sbjct: 2 SGTFLVDEINYQKQQISISDPENCMVKRLL-TFNTSGSPFSYGFSFYYTFLTCPNEVV-- 58
Query: 113 NHVPEHH-RTVACLSTENYTVLAVPSRFYNETKLPMLPVPSSCEVIRADVMVPVSGGYWN 171
+P ++ CLS + A + +++ +P SC++++ + VPV Y +
Sbjct: 59 --IPVWSLMSIPCLSNSTSSFFATSNLTFSKL------LPPSCQIVKG-LYVPVDVIYKD 109
Query: 172 GLEDD-----------IRLSWSDPHCAPCEYRGEVCKFTNDDTSLVVGCSNSGKES-VKY 219
+ ++ + L WS P+C CE C F N + V ++ E+ +
Sbjct: 110 VITEEKGFSTVPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEVKYLADPPDETKSRL 169
Query: 220 DAIIIGIGF-GTPGALFIIALGCYLCSKVWTHDPQRHR--RRQPTTELSTSTVVASLDKP 276
+II + G A I A+ Y + Q R T + V LD+
Sbjct: 170 RPLIITLCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVVVTTGLDQS 229
Query: 277 TIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNA 336
TIESY K +G S R P N CPICLS Y K+T+R +P+C+H FH CID+WL++++
Sbjct: 230 TIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHS 289
Query: 337 SCPVCR 342
SCPVCR
Sbjct: 290 SCPVCR 295
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 17/131 (12%)
Query: 224 IGIGFGTPGALFI------IALGCYLCSKVWTHDPQRHRRRQPTTEL------STSTVVA 271
+G+G+G A+ I I L Y+C + + R + T+++ + V
Sbjct: 11 VGLGYGIAIAVSILVLISFIMLASYICIRS-----KSTGRDEATSDVVLDLPSPAAEVKL 65
Query: 272 SLDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
LD+P IESYP+ ++G S R P+PN+ C ICL Y+ ++ +R IP+CNH FH C+D+W
Sbjct: 66 GLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEW 125
Query: 332 LRMNASCPVCR 342
LR +A+CP+CR
Sbjct: 126 LRTSATCPLCR 136
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 263 ELSTSTVVASLDKPTIESYPK------TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTI 316
+L VV LD+ I SYPK T S D TC ICL YK + LR +
Sbjct: 95 DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMM 154
Query: 317 PKCNHYFHAYCIDKWLRMNASCPVCR 342
P+C HYFH C+D WL++N SCPVCR
Sbjct: 155 PECKHYFHLCCLDAWLKLNGSCPVCR 180
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 265 STSTVVASLDKPTIESYPK---------TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRT 315
S + VV LD I SYPK + G + + TC ICL Y ++ LR
Sbjct: 92 SGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRM 151
Query: 316 IPKCNHYFHAYCIDKWLRMNASCPVCR 342
+P+C HYFH YC+D WL++N SCPVCR
Sbjct: 152 MPECKHYFHVYCLDAWLKLNGSCPVCR 178
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 273 LDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWL 332
LD+ TI+SYPK I+ + P + C ICL YK K LR +P CNH FH CID WL
Sbjct: 122 LDEDTIQSYPK-ILYSEAKGPT-TASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWL 179
Query: 333 RMNASCPVCR 342
R+N +CPVCR
Sbjct: 180 RLNPTCPVCR 189
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 264 LSTSTVVASLDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHY 322
++ +TV LD TIE++P + V ++ C ICL+ ++ +TLR +PKC+H
Sbjct: 87 VTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHV 146
Query: 323 FHAYCIDKWLRMNASCPVCRKRLRFKSP 350
FH +CI WL+ + +CPVCR L ++P
Sbjct: 147 FHPHCIGAWLQGHVTCPVCRTNLAEQTP 174
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 265 STSTVVASLDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFH 324
++S + LDK IES P + S + C +CLS+++ + LR +PKC H FH
Sbjct: 90 ASSDRFSGLDKTAIESLP--LFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFH 147
Query: 325 AYCIDKWLRMNASCPVCRKRL 345
CID+WL +A+CP+CR R+
Sbjct: 148 IGCIDQWLEQHATCPLCRDRV 168
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 273 LDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
L+K IES+P + V G + C ICLS ++ ++TLR +P C+H FHA CID W
Sbjct: 95 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 154
Query: 332 LRMNASCPVCRKRLRFK 348
L ++CPVCR L K
Sbjct: 155 LSSWSTCPVCRANLSLK 171
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 239 LGCYLCSKVWTHDPQRHRRRQPTTELSTSTVVASLDKPTIESYPKTIVGVSGRQPKPNDN 298
+G + S V + + Q T++ + + L ++ PK + P
Sbjct: 119 IGPAMLSAVQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRI----TDTSPEIV 174
Query: 299 TCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRL 345
+C +CL ++ +T+R++P C+H FH CIDKWLR +ASCP+CR+ L
Sbjct: 175 SCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 267 STVVASLDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAY 326
S+ + LDK IES P S + C +CLS+++ + LR +PKC H FH
Sbjct: 93 SSRFSGLDKKAIESLP--FFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIG 150
Query: 327 CIDKWLRMNASCPVCRKRL 345
CID+WL +A+CP+CR R+
Sbjct: 151 CIDQWLEQHATCPLCRNRV 169
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 228 FGTPGALFIIALGCYLCSKV---WTHDP-QRHRRRQPTTELSTSTVVASLDKPTIESYPK 283
F T + II L ++ + + H R + E+ S L+K +ES+P
Sbjct: 46 FPTETVIAIIVLAIFISLSMVACFLHKTFYRAEVEAASQEVFHSRARRGLEKELVESFPI 105
Query: 284 TIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
+ V G + C ICLS + K+TLR +P C+H FHA CID WL ++CP CR
Sbjct: 106 FLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACR 165
Query: 343 KRLRFK 348
L K
Sbjct: 166 ANLSLK 171
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 271 ASLDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCID 329
+ +D+ IES P G +SG + + C +CL+R++P + LR +PKC H FH C+D
Sbjct: 119 SGIDRSVIESLPVFRFGALSGHK---DGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 175
Query: 330 KWLRMNASCPVCRKRL 345
WL +++CP+CR R+
Sbjct: 176 TWLDAHSTCPLCRYRV 191
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 238 ALGCYL-CSKVWTHDPQRHRRRQPTTELSTSTVVASLDKPTIESYPKTIVGVSGRQPKPN 296
AL C L ++ +T D Q L L K ++ P + G K
Sbjct: 53 ALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKAT 112
Query: 297 DNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLRFKSP 350
+ C ICL ++ + +R +PKCNH FH CID WL +SCP CR+ L + P
Sbjct: 113 E--CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQP 164
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 273 LDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
LD +E++P + V ++ + C ICL+ ++ +TLR +PKC+H FH +CID W
Sbjct: 100 LDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAW 159
Query: 332 LRMNASCPVCRKRL 345
L + +CPVCR L
Sbjct: 160 LEAHVTCPVCRANL 173
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 273 LDKPTIESYPK-TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
L +E PK TI G + N ++C +CL ++ +T+R++P C+H FH CID W
Sbjct: 168 LTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNW 227
Query: 332 LRMNASCPVCRKRL 345
L + SCP+CR+ +
Sbjct: 228 LLRHGSCPMCRRDI 241
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 263 ELSTSTVVASLDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNH 321
E+ S V +DK IES+P + V + C ICL ++ ++ LR +P C+H
Sbjct: 82 EVLHSRVRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSH 141
Query: 322 YFHAYCIDKWLRMNASCPVCRKRLRFKS 349
FHA CID+WL ++CPVCR L KS
Sbjct: 142 TFHANCIDEWLSSRSTCPVCRANLSLKS 169
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 222 IIIGIGFGTPGALFIIALGCYLCSKVWTHD--------------------PQRHRRRQPT 261
++I I FG F++A L SK +D P+R + P
Sbjct: 61 LVIAI-FGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPF 119
Query: 262 TELSTSTVVASLDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNH 321
L +ST A LD I+ + K N C ICL + ++LR +PKCNH
Sbjct: 120 A-LESST--AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNH 176
Query: 322 YFHAYCIDKWLRMNASCPVCRKRL 345
FH CID+WL+ +++CP+CR ++
Sbjct: 177 TFHVVCIDRWLKSHSNCPLCRAKI 200
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 273 LDKPTIESYPK-TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
LD +ES+P V + D C ICL+ + +T+R +P CNH FH CID W
Sbjct: 96 LDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTW 155
Query: 332 LRMNASCPVCRKRLRFKS 349
L +A+CPVCR L KS
Sbjct: 156 LYSHATCPVCRSNLTAKS 173
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 273 LDKPTIESYPKTI-VGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
LD I+S+P + G +P + C +CL+ +K +TLR +P C H FHA C+D W
Sbjct: 57 LDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIW 116
Query: 332 LRMNASCPVCRKRL 345
L +++CP+CR ++
Sbjct: 117 LSHSSTCPICRAKV 130
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 221 AIIIGIGFGTPGALFIIALGCYLCSKVWTHDPQRHRRRQPTTELSTSTVVAS------LD 274
A+II + T L L C +C K P H T E V + L
Sbjct: 47 AVIIAMLMFT---LLFSMLACCVCYKYTNTSP--HGTSSDTEEGGHGEVAFTRRTSRGLG 101
Query: 275 KPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLR 333
K I S+P + V G + C ICL+ ++ ++TLR +P C+H FHA CID WL
Sbjct: 102 KDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLS 161
Query: 334 MNASCPVCRKRL 345
++CPVCR L
Sbjct: 162 SRSTCPVCRASL 173
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 223 IIGIGFGTPGALFIIALGCYLCSKVWTH-DPQRHRRR----QPTTELSTSTVVASLDKPT 277
+IGI T L + C W D R RRR P S V LD+
Sbjct: 48 VIGI-LATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRGLDESA 106
Query: 278 IESYP------KTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
I + P + +V Q K N C +CL+ ++ + LR IP C H FH CID W
Sbjct: 107 IRAIPVFKFKKRDVVAGEEDQSK-NSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIW 165
Query: 332 LRMNASCPVCRKRLRFKSPF 351
L+ NA+CP+CR + ++ F
Sbjct: 166 LQGNANCPLCRTSVSCEASF 185
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Query: 271 ASLDKPTIESYP----KTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAY 326
A +D+ I++ P KT++G+ + + + C +CL + + LR +PKC+H FH
Sbjct: 94 AEIDQSFIDALPLLHYKTMIGL-----RHDLSDCAVCLREFTAEDELRLLPKCSHAFHVE 148
Query: 327 CIDKWLRMNASCPVCR 342
CID WL N++CP+CR
Sbjct: 149 CIDTWLLTNSTCPLCR 164
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 273 LDKPTIESYPKT-IVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
L ++ PK I G + N ++C +CL ++ +T+R++P C+H FH CID W
Sbjct: 163 LTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNW 222
Query: 332 LRMNASCPVCRKRL 345
L + SCP+CR+ L
Sbjct: 223 LFRHGSCPMCRRDL 236
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 271 ASLDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCID 329
+ LD+ I++ P + G V+ +P D C +CL+ + LR +P C+H FH +CID
Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFD--CAVCLNEFSDTDKLRLLPVCSHAFHLHCID 236
Query: 330 KWLRMNASCPVCRKRL 345
WL N++CP+CR+ L
Sbjct: 237 TWLLSNSTCPLCRRSL 252
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 251 DPQRHRRRQPTTELSTSTVVASLDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPK 310
D +R + + E S+V+ SL P + V+ R N C +CLS+++P+
Sbjct: 75 DSRRFSGHRVSPETERSSVLDSL--PIFK-----FSSVTRRSSSMNSGDCAVCLSKFEPE 127
Query: 311 QTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRL 345
LR +P C H FHA CID WL N +CP+CR L
Sbjct: 128 DQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPL 162
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLRFKS 349
CP+CL+ ++ ++LR +PKCNH FH CID WL + +CP+CR + S
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMIS 226
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
Query: 271 ASLDKPTIESYP----KTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAY 326
+ +D+ I++ P K+IVG+ + P D CP+CL ++ + LR +PKC+H FH
Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGL---KISPFD--CPVCLCEFETEDKLRLLPKCSHAFHVE 152
Query: 327 CIDKWLRMNASCPVCRKRL 345
CID WL +++CP+CR L
Sbjct: 153 CIDTWLLSHSTCPLCRSNL 171
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
Query: 268 TVVASLDKPTIESYP-------KTI-VGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKC 319
T LD IE++P KT+ +G + CP+CL+ ++ +TLR IP+C
Sbjct: 85 TTEPGLDASVIETFPTFPYSTVKTLRIGKEALE-------CPVCLNEFEDDETLRLIPQC 137
Query: 320 NHYFHAYCIDKWLRMNASCPVCRKRL 345
H FH CID WLR +CP+CR L
Sbjct: 138 CHVFHPGCIDAWLRSQTTCPLCRANL 163
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 270 VASLDKPTIESYPK-----TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFH 324
V L + I+ +PK V S ++ + C ICL+ YK +R +P CNH FH
Sbjct: 94 VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFH 153
Query: 325 AYCIDKWLRMNASCPVCR 342
C+D WLR++ +CPVCR
Sbjct: 154 DNCVDPWLRLHPTCPVCR 171
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLRFKSPF 351
C +CLS ++ ++ LR IP C+H FH CID WL+ NA+CP+CR R+ + F
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
C +CLS ++ ++LR +PKCNH FH CID WL+ +++CP+CR
Sbjct: 142 CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
C +CLS ++ ++LR +PKCNH FH CID WL+ +++CP+CR
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 242 YLCSKVWTHDPQRHRRRQPTTELSTSTVVA----SLDKPTIESYPKTIVGVSGRQPKPND 297
YL +K H RR +LS S V LD I S P +VG+ ND
Sbjct: 47 YLYAKFVLH------RRSAFQDLSFSVVSQPPKRGLDSLVIASLPTFVVGIK------ND 94
Query: 298 ---NTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
C +CLS + K R +P C H FH C+D WL ++CPVCR
Sbjct: 95 VAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLRFKS 349
C +CLS R +P C+H+FH CID WL+ N++CP+CRKR+ K
Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQ 137
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 273 LDKPTIESYPK-TIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKW 331
LD IE++P V + C +CL+ ++ +TLR IPKC H FH CID W
Sbjct: 116 LDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAW 175
Query: 332 LRMNASCPVCRKRL 345
LR + +CP+CR L
Sbjct: 176 LRSHTTCPLCRADL 189
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 297 DNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
D C ICLS + + LR +PKCNH FH CIDKWL+ + +CP CR
Sbjct: 132 DEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 252 PQRHRRRQPTTELSTSTVVA-------SLDKPTIESYPKTIVGVSGRQPKPNDNTCPICL 304
P+ R LSTS VV+ LD + S P V + K + C ICL
Sbjct: 88 PRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLP---VYRYTKAAKQRNEDCVICL 144
Query: 305 SRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLRF 347
S ++ +T++ IP C H FH C+D WL +CP+CR F
Sbjct: 145 SDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLF 187
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 273 LDKPTIESYPKTIVG-VSGRQP-KPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDK 330
LDK +E++P + G V R K C +CL+ + LR +P C H FH CID
Sbjct: 104 LDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDP 163
Query: 331 WLRMNASCPVCRKRL 345
WL +CP+CR L
Sbjct: 164 WLAAAVTCPLCRANL 178
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 273 LDKPTIESYPKTIV----GVSGRQPKPNDNT-CPICLSRYKPKQTLRTIPKCNHYFHAYC 327
L K ++S P++ SG + D+T C ICL+ + + +R +P C H FH C
Sbjct: 70 LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129
Query: 328 IDKWLRMNASCPVCRKRL 345
IDKWL +SCP CR+ L
Sbjct: 130 IDKWLVSRSSCPSCRRIL 147
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 273 LDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWL 332
LD IES+P+ V + C ICL+ + T+R I CNH FH CID W
Sbjct: 131 LDSKIIESFPEYPYSVKDH----GTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWF 186
Query: 333 RMNASCPVCRKRL 345
+ +CPVCR+ L
Sbjct: 187 EGHKTCPVCRREL 199
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 273 LDKPTIESYPKTIVGVSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWL 332
L K IE P + Q + C +C S ++ +Q LR +P CNH FHA C+DKWL
Sbjct: 371 LTKADIEQLPSYRFNLENHQSE--QTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWL 427
Query: 333 RMNASCPVCR 342
+ N +CP+CR
Sbjct: 428 KTNRTCPICR 437
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLR 346
C ICL K + R++PKC+H FH C+DKWL + SCP+CR+ ++
Sbjct: 176 CTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAVK 222
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 291 RQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCR 342
R P D C ICL Y+ LR +P CNH+FH CIDKWL +N+ CP+C+
Sbjct: 329 RSLSPEDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCK 379
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 300 CPICLSRYKPKQTLRTIPKCNHYFHAYCIDKWLRMNASCPVCRKRLRF 347
C +CL + ++LR +P+C+H FH CID WL+ +++CP+CR + F
Sbjct: 157 CSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITF 204
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 273 LDKPTIESY-PKTIVGVSGRQPKPNDNT----CPICLSRYKPKQTLRTIPKCNHYFHAYC 327
L + IE+ PK +VG + + C ICLS Y + R P C H +HA C
Sbjct: 98 LKQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALC 157
Query: 328 IDKWLRMNASCPVCRKRL 345
ID WL+ + +CP CRK L
Sbjct: 158 IDAWLKNHLTCPTCRKDL 175
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 268 TVVASLDKPTIESYPKTIVG-VSGRQPKPNDNTCPICLSRYKPKQTLRTIPKCNHYFHAY 326
T V LD+ I S+P + V R+ C +C+ ++ +TLR +P+C H FHA
Sbjct: 63 TAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHAD 122
Query: 327 CIDKWLRMNASCPVCRKRL 345
C+ WL +++CP+CR L
Sbjct: 123 CVSVWLSDHSTCPLCRVDL 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,941,478
Number of Sequences: 539616
Number of extensions: 6239811
Number of successful extensions: 17238
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 16719
Number of HSP's gapped (non-prelim): 601
length of query: 352
length of database: 191,569,459
effective HSP length: 118
effective length of query: 234
effective length of database: 127,894,771
effective search space: 29927376414
effective search space used: 29927376414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)