Your job contains 1 sequence.
>044814
MPMAVLRNSLASISAQIEPRFRFRTMNIIASKNRNPNQNIQQKVIPHCQVIPGADSREIN
HIVEETFGRYTSKALKRNGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHS
QTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAV
YAQKETCSEELNVERLVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSS
LPDVYTHFRKSIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLELHSPKVSKGMRFV
GGESAALGRVNEYFWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRYIYEEVKSY
ERERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDG
CTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNY
GNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALPKERRNFPGGSYIEQ
IVSLKHGNINQNRNQNDSLTRTGRRNNFKGKHAQVNR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044814
(577 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 1204 1.9e-122 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 630 1.6e-73 2
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 630 1.6e-73 2
TAIR|locus:2061961 - symbol:PHR2 "photolyase/blue-light r... 539 5.6e-52 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 429 2.6e-40 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 342 1.1e-38 2
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 340 2.4e-37 2
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 360 4.9e-37 2
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 376 4.0e-33 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 376 7.9e-33 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 360 1.4e-32 1
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 368 8.0e-32 1
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 303 2.0e-31 2
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 303 2.0e-31 2
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 352 3.7e-30 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 347 4.4e-30 1
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 326 1.3e-29 2
SGD|S000005913 - symbol:PHR1 "DNA photolyase involved in ... 319 2.5e-28 2
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 332 5.5e-28 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 335 1.4e-27 1
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 331 2.2e-27 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 266 3.2e-27 2
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 330 4.3e-27 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 330 4.3e-27 1
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 329 5.6e-27 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 329 5.6e-27 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 243 1.1e-26 2
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 288 1.1e-26 2
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 326 1.2e-26 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 324 2.5e-26 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 324 2.5e-26 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 324 2.6e-26 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 323 2.7e-26 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 250 2.8e-26 2
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 323 2.9e-26 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 250 3.2e-26 2
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 247 4.7e-26 2
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 289 5.4e-26 2
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 247 6.1e-26 2
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 247 6.1e-26 2
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 246 1.2e-25 2
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 243 1.7e-25 2
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 315 2.2e-25 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 314 2.8e-25 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 310 1.2e-24 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 308 5.8e-24 2
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 202 1.5e-23 3
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 278 3.2e-21 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 207 3.3e-21 2
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 246 4.5e-21 2
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 246 9.7e-21 2
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 246 1.0e-20 2
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 200 2.4e-19 2
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 216 3.0e-19 2
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 190 5.3e-18 2
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 242 2.7e-17 1
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 211 8.1e-15 1
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 189 6.6e-14 1
TAIR|locus:2122654 - symbol:AT4G25290 species:3702 "Arabi... 203 7.0e-14 2
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 205 2.8e-13 1
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 1204 (428.9 bits), Expect = 1.9e-122, P = 1.9e-122
Identities = 220/446 (49%), Positives = 300/446 (67%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
I RNDLR+ DNE A ++E ++P+YC DPRH Q TYH+ FPKTG R +FL++ +
Sbjct: 9 ICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSV 68
Query: 144 ADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYA-QKETCSEELNVERLVRKNLQ 202
DLR L G LL+R GKPE+++ L K G+ + A +E SEE +VE + L+
Sbjct: 69 KDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVE----EKLK 124
Query: 203 QVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDH-SSLPDVYTHFRKSIEAKCTVRGC 261
++ N +++ WG+T+YH DD+PF H LPDVYT FRK++EA+ VR
Sbjct: 125 EICCQ--------NKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPV 176
Query: 262 IRIPSSFGPPPSVVDWGSVPLIEQLELHSPKVSKGMRFV--GGESAALGRVNEYFWKKDL 319
+ P PPS ++ G +P + L P F GGE+ AL R+ YFW +
Sbjct: 177 LSTPEQVKSPPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEALARLKHYFWDTNA 236
Query: 320 LKVYKETRNEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLFELMW 379
+ YKETRN M+G D+STKFSPWLA G ISPRYIYE++K YE ER AN STYWV+FEL+W
Sbjct: 237 VATYKETRNGMIGVDFSTKFSPWLALGCISPRYIYEQIKKYEVERTANQSTYWVIFELLW 296
Query: 380 RDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGF 439
RDYF+F++LKYGN +F++ G + W+ D K+F++W++G TG P +DANM+EL++TGF
Sbjct: 297 RDYFKFVALKYGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGF 356
Query: 440 MSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYF 499
MSNRGRQ SFL +D+G+DWR+GAEWFE L+D+D CSNYGNW Y AG+GNDPRE+R F
Sbjct: 357 MSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRENRKF 416
Query: 500 SIPKQAQNYDREGEYVAYWLPQLKAL 525
++ KQ +YD G+YV W+P+L+ +
Sbjct: 417 NMIKQGLDYDNNGDYVRQWVPELRGI 442
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 630 (226.8 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 131/286 (45%), Positives = 177/286 (61%)
Query: 234 IPFDHSSLPDVYTHFRKSIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLELHSPKV 293
+PF +LP +T FRK +E ++ + P PP W +PL++ + P
Sbjct: 143 LPFALEALPSTFTQFRKQVET-ISLSAPMGYPHVL--PPIEQGW-QLPLMDIVT--EPNH 196
Query: 294 SKGMRFVGGESAALGRVNEYFWKKDLLKV-YKETRNEMLGPDYSTKFSPWLASGSISPRY 352
S FVGGE A L YF LL YKETRN + G DYSTKFSPWLA G++SP+
Sbjct: 197 SA---FVGGEQAGLTHCQNYF--SSLLPSRYKETRNGLDGMDYSTKFSPWLALGAVSPKT 251
Query: 353 IYEEVKSYERERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQK 412
IY ++ YE ANDSTYW+ FEL+WR+YF + + +YG LF G + + S +
Sbjct: 252 IYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQ 311
Query: 413 LFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLL 472
F W+ G T +P+++A M++L+ TG+MSNRGRQ+ S LV ++G+DWR GA +FET L+
Sbjct: 312 RFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLV 371
Query: 473 DYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYW 518
DYD SN+GNW Y AGVG DPR R F++ KQA YD +GE+VA W
Sbjct: 372 DYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTYDPKGEFVAKW 417
Score = 131 (51.2 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 47/180 (26%), Positives = 76/180 (42%)
Query: 80 KGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYC---VDP---RHSQTTYHFGFPKTGA 133
K + + WF NDLRV DN L +A + ++ +YC + P R++Q T + G
Sbjct: 3 KKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQT------QWGE 56
Query: 134 LRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNV 193
+ +FL + LADL +L G L + P + + L +Y S+E
Sbjct: 57 AKKRFLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQA 116
Query: 194 ERLVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIE 253
+ ++ V + Q+ + PQL PF +LP +T FRK +E
Sbjct: 117 IARIHQDFSSVHIHQQALHSLLSEPQL--------------PFALEALPSTFTQFRKQVE 162
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 630 (226.8 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 131/286 (45%), Positives = 177/286 (61%)
Query: 234 IPFDHSSLPDVYTHFRKSIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLELHSPKV 293
+PF +LP +T FRK +E ++ + P PP W +PL++ + P
Sbjct: 143 LPFALEALPSTFTQFRKQVET-ISLSAPMGYPHVL--PPIEQGW-QLPLMDIVT--EPNH 196
Query: 294 SKGMRFVGGESAALGRVNEYFWKKDLLKV-YKETRNEMLGPDYSTKFSPWLASGSISPRY 352
S FVGGE A L YF LL YKETRN + G DYSTKFSPWLA G++SP+
Sbjct: 197 SA---FVGGEQAGLTHCQNYF--SSLLPSRYKETRNGLDGMDYSTKFSPWLALGAVSPKT 251
Query: 353 IYEEVKSYERERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQK 412
IY ++ YE ANDSTYW+ FEL+WR+YF + + +YG LF G + + S +
Sbjct: 252 IYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQ 311
Query: 413 LFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLL 472
F W+ G T +P+++A M++L+ TG+MSNRGRQ+ S LV ++G+DWR GA +FET L+
Sbjct: 312 RFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLV 371
Query: 473 DYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYW 518
DYD SN+GNW Y AGVG DPR R F++ KQA YD +GE+VA W
Sbjct: 372 DYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTYDPKGEFVAKW 417
Score = 131 (51.2 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 47/180 (26%), Positives = 76/180 (42%)
Query: 80 KGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYC---VDP---RHSQTTYHFGFPKTGA 133
K + + WF NDLRV DN L +A + ++ +YC + P R++Q T + G
Sbjct: 3 KKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQT------QWGE 56
Query: 134 LRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNV 193
+ +FL + LADL +L G L + P + + L +Y S+E
Sbjct: 57 AKKRFLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQA 116
Query: 194 ERLVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIE 253
+ ++ V + Q+ + PQL PF +LP +T FRK +E
Sbjct: 117 IARIHQDFSSVHIHQQALHSLLSEPQL--------------PFALEALPSTFTQFRKQVE 162
>TAIR|locus:2061961 [details] [associations]
symbol:PHR2 "photolyase/blue-light receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0003913 "DNA photolyase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AC002535 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:AF053366 EMBL:AY087383
IPI:IPI00547753 PIR:T00425 RefSeq:NP_182281.1 UniGene:At.10721
UniGene:At.69338 ProteinModelPortal:Q8LB72 SMR:Q8LB72 STRING:Q8LB72
PaxDb:Q8LB72 PRIDE:Q8LB72 EnsemblPlants:AT2G47590.1 GeneID:819372
KEGG:ath:AT2G47590 GeneFarm:2668 TAIR:At2g47590
HOGENOM:HOG000240044 InParanoid:Q8LB72 OMA:TNWLMFE PhylomeDB:Q8LB72
ProtClustDB:CLSN2683619 Genevestigator:Q8LB72 GermOnline:AT2G47590
Uniprot:Q8LB72
Length = 447
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 134/348 (38%), Positives = 193/348 (55%)
Query: 71 TSKALKRNGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPK 130
++ AL+R A+VWFRNDLRV DNE L A D VLPVYC DPR + GF K
Sbjct: 109 SAAALRR----AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSS-GFDK 163
Query: 131 TGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEE 190
TG RAQFLIE +++LRKNL RG NL++R GKPE ++ LAK GA AVYA +E +E
Sbjct: 164 TGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDE 223
Query: 191 LNVERLVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRK 250
+ E + +++ + ++K WG+T+YHLDD+PF LP Y F+
Sbjct: 224 VKAEGKIETAMKEEGV------------EVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKD 271
Query: 251 SIEAKCTVRGCIRIPSSFGPPPSV--VDWGSVPLIEQLELH-SPKVSKGMR--FVGGESA 305
++ K +R I PS V+ G +P + L + +P+ S+ + VGGE+
Sbjct: 272 KVQ-KLEIRKTIAALDQLKSLPSRGDVELGDIPSLLDLGISPTPRTSQEGKPTMVGGETE 330
Query: 306 ALGRVNEYF--WKKDLLKV-YKETRNEMLGPDYSTKFSPWLASGSISPRYIYEEVK---- 358
AL R+ + + L K K N + G ++S K SPWLA GSISPR +++E+K
Sbjct: 331 ALTRLKSFAADCQARLSKGNQKGGNNSVFGANFSCKISPWLAMGSISPRSMFDELKKTIS 390
Query: 359 -----SYERERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHL-GGP 400
+ R + W+++EL+WRD+FRFI+ KY ++ + GP
Sbjct: 391 ASTTSTTPRNGPGDTGLNWLMYELLWRDFFRFITKKYSSAKTQVEAGP 438
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 133/463 (28%), Positives = 218/463 (47%)
Query: 79 GKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQT---TYHFGFPKTGALR 135
G G +++WFR LRV DN AL A SE + PV+ +DP + ++ + G + G R
Sbjct: 23 GSG-SLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNR 81
Query: 136 AQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
+FL+E L DL +L G LL+ G+P E++ + + K C E + +
Sbjct: 82 IRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKV------KRLCFE-YDTDP 134
Query: 196 LVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSI-EA 254
+ +V + S P ++ H+ I + P Y F K E
Sbjct: 135 YYQALDVKVKDYASSTGVEVFSPVSHTLFNPA--HI--IEKNGGKPPLSYQSFLKVAGEP 190
Query: 255 KCTVRGCIRIPSSFGPPPSVVDWG--SVPLIEQLELHSPKVSKGMRFVGGESAALGRVNE 312
C + SS P + + G VP +E+L + + F GGES AL R+ +
Sbjct: 191 SCAKSELVMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTK 250
Query: 313 YFWKKDLLKVYKETRNE---MLGPDYSTKFSPWLASGSISPRYIYEEVKS-YERERVAND 368
K + +++ + + L P +T SP+L G +S RY Y+ +++ Y+ +
Sbjct: 251 SISDKAWVANFEKPKGDPSAFLKPA-TTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTS 309
Query: 369 STYWVLFELMWRDYFRFISLKYGNSLFH-LGGPRKL-EYKWSQDQKLFESWRDGCTGYPL 426
+L +L+WR++F + +G F + G R + W++D + +WRDG TGYP
Sbjct: 310 PPVSLLGQLLWREFF--YTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPW 367
Query: 427 IDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTY 485
IDA M +L G+M + R FL R D+ I W G + FE L+D D N GNW +
Sbjct: 368 IDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMW 427
Query: 486 GAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALPKE 528
+ + +R +S + YD +G+Y+ ++LP LK +PK+
Sbjct: 428 LSCSSFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQ 470
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 342 (125.4 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 91/299 (30%), Positives = 153/299 (51%)
Query: 244 VYTHFRKSIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLELHSPKVSKGM-RFVGG 302
++T F K I A R + P F ++ ++ L H P S+G ++ G
Sbjct: 141 IFTPFWKHINASLQPRKTLAAPKKFSQHRAIKS-DNLETWNLLPKH-PDWSQGFDQWKPG 198
Query: 303 ESAALGRVNEYFWKKDLLKVYKETRNEMLGPDYSTK--FSPWLASGSISPRYIYEEV-KS 359
E A + ++ K+ LK Y R+ PD S+ SP+L G IS R ++ + ++
Sbjct: 199 EKNAQIVLKKFI--KENLKNYPAHRDR---PDISSTSHLSPYLHFGEISIRQVWTAITQA 253
Query: 360 YERERVANDSTYWVLFELMWRDYFRFISLKY---GNSLFHLGGPRKLE-YKWSQDQKLFE 415
+++ + L +L+WR++ ++ + G S F + + +KW +++
Sbjct: 254 TIQDKNLQKAADVFLRQLIWREFAYYLLWHFPQMGRSNFR----NQFDNFKWKKNKNWLR 309
Query: 416 SWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYD 475
+W+ G TGYP++DA M+EL TG+M NR R I SFLV+D+ IDWR G +WF LLD D
Sbjct: 310 AWQKGLTGYPIVDAGMRELWCTGYMHNRVRMIVASFLVKDLMIDWREGEKWFWNTLLDAD 369
Query: 476 PCSNYGNWTYGAGVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKALPKERRNFP 533
+N W + AG G D R F+ Q++ +D +G Y+ W+P+L +P + ++P
Sbjct: 370 LANNALGWQWIAGCGPDAAPYFRIFNPILQSKKFDPDGTYIKRWIPELAKVPSKYIHYP 428
Score = 115 (45.5 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
I WFR DLR+ DN AL++A S++ ++P+Y +D + G + +L L
Sbjct: 4 IFWFRQDLRLSDNPALVEAAKSADHLIPLYILDDQ---------LKMLGDAQRWWLHHSL 54
Query: 144 ADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVY 181
+ L+ L +G +L+++ G + ++ L K + +Y
Sbjct: 55 SSLQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIY 92
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 340 (124.7 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 81/260 (31%), Positives = 142/260 (54%)
Query: 272 PSVVDWGSVPLIEQLELHSPKVS-KGMRFVGGESAALGRVNEYFWKKDLLKVYKETRNEM 330
P V GS+ + L+ P+ S F E AA+ ++ ++ ++ Y++ R +
Sbjct: 173 PKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFC--QNGAGEYEQQR-DF 229
Query: 331 LGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDS-TYWVLFELMWRDYFRFISLK 389
+ +++ S LA+G +SPR + + + + + + + W L EL+WR+++R + +
Sbjct: 230 PAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVW-LNELIWREFYRHL-IT 287
Query: 390 YGNSLF-HLGGPRKLE-YKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQI 447
Y SL H + +W + ++W++G TGYP++DA M++L+ TG+M NR R I
Sbjct: 288 YHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMI 347
Query: 448 ACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRED-RYFSIPKQAQ 506
SFLV+D+ IDWR G +F + L+D D +N G W + A G D R F+ Q +
Sbjct: 348 TASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGE 407
Query: 507 NYDREGEYVAYWLPQLKALP 526
+D EGE++ WLP+L+ +P
Sbjct: 408 KFDHEGEFIRQWLPELRDVP 427
Score = 107 (42.7 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 59/199 (29%), Positives = 88/199 (44%)
Query: 84 IVWFRNDLRVLDNEALLKAW-DSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
+VWFR DLR+ DN AL A +SS VL +Y PR T H P+ +A+ +
Sbjct: 5 LVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAT--HNMSPR----QAELINAQ 58
Query: 143 LADLRKNLMNRGLNLLIRHGKP----EEIIPSL-AKSFGAHAVYA-QKETCSEELNVERL 196
L L+ L +G+ LL R EI+ + A++ H Y Q E +VE
Sbjct: 59 LNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVE-- 116
Query: 197 VRKNLQQVVLSSQSNDKSTNHPQLKLIWGT-TMYHLDDIPFDHSSLPDVYTHFRKSIEAK 255
V + L+ VV + D S P ++ G MY + PF ++ L R+ + +
Sbjct: 117 VERALRNVVC--EGFDDSVILPPGAVMTGNHEMYKVFT-PFKNAWLK----RLREGMP-E 168
Query: 256 CTVRGCIRIPSSFGPPPSV 274
C +R S P PS+
Sbjct: 169 CVAAPKVRSSGSIEPSPSI 187
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 360 (131.8 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 78/234 (33%), Positives = 131/234 (55%)
Query: 299 FVGGESAALGRVNEYFWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRYIYEEVK 358
F GE L R+ E+ K Y + RN + G + ++K SP+ ASGS+S R + +
Sbjct: 294 FPAGEHEGLRRLEEFLEKAT---AYDDERNFLSG-ETTSKLSPYFASGSLSARTAVAKAR 349
Query: 359 SYERERVAN-DSTY--WVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYK---WSQDQK 412
+++ ++ Y W+ E+ WRD+++ + + + + K E+ WS +
Sbjct: 350 EANAGKISRGEAGYISWIS-EVAWRDFYKHVLVHW--PFICMNKCFKFEFTNIDWSYNNT 406
Query: 413 LFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLL 472
FE+W G TGYPL+DA M++L T +M NR R + SFL +D+ IDWR G +F L+
Sbjct: 407 HFEAWAAGKTGYPLVDAAMRQLHATAWMHNRCRMVVSSFLCKDLLIDWRRGERYFMEHLI 466
Query: 473 DYDPCSNYGNWTYGAGVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKAL 525
D D SN+G W +G+ G DP+ R F+ +Q++ +D +GE++ W+P+L+ +
Sbjct: 467 DGDFASNHGGWGFGSSTGVDPQPYFRIFNPIRQSERFDPDGEFIRRWVPELRGV 520
Score = 98 (39.6 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 70 YTSKALKRNGK--GVAIV-WFRNDLRVLDNEALLKAWD-SSEMVLPV---YCVDPRHSQT 122
YT + ++N A+V WF++DLR+ DN AL A+ + E +P+ Y + P
Sbjct: 61 YTETSAQQNAMTANAAVVHWFKSDLRLHDNRALQMAYRVAREHKIPLIGLYILSPE--DL 118
Query: 123 TYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLI-----RHGKPEEIIPSLAKSFGA 177
T H P R + L L+++L + L + R P II +L + +GA
Sbjct: 119 TAHLSSPA----RVDLTLRTLEQLKRDLGELDVPLYMETQACRKDIPRRII-NLCQEWGA 173
Query: 178 HAVYAQKETCSEELNVE-RLVR 198
+ ++A E +EL E +L+R
Sbjct: 174 NHLFANLEYEVDELRREAKLIR 195
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 376 (137.4 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 132/457 (28%), Positives = 204/457 (44%)
Query: 87 FRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADL 146
FR LR+ DN ALL A SSE+V PVY +D ++ H G ALR FL++ L DL
Sbjct: 9 FRKGLRLHDNPALLAALQSSEVVYPVYILDRAFMTSSMHIG-----ALRWHFLLQSLEDL 63
Query: 147 RKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVY--AQKETCSEELNVE-RLVRKNLQQ 203
R +L G LL+ G+ E ++ + + V A+ E +E+ R + + L
Sbjct: 64 RSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRGLGEELGF 123
Query: 204 VVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIEAKCTVRGCIR 263
VLS + L+L GT P P Y F + + +R
Sbjct: 124 QVLSLMGHSLYNTQRILELNGGT--------P------PLTYKRFLRILSLLGDPEVPVR 169
Query: 264 IPSS--F---GPPP-SVVDWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYF--- 314
P++ F PP + + VPL L++ +S + GGES L R+ ++
Sbjct: 170 NPTAEDFQRCSPPELGLAECYGVPLPTDLKIPPESISP---WRGGESEGLQRLEQHLADQ 226
Query: 315 -WKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPR-YIYEEVKSYERERVANDSTYW 372
W K K N +L P +T SP+ ++G +S R + Y Y + + +
Sbjct: 227 GWVASFTKP-KTVPNSLL-PS-TTGLSPYFSTGCLSVRSFFYRLSNIYAQAKHHSLPPVS 283
Query: 373 VLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMK 432
+ +L+WR++F ++ N G P L+ +W +D + W+ TG+P IDA M
Sbjct: 284 LQGQLLWREFFYTVASATPNFTKMAGNPICLQIRWYEDAERLHKWKTAQTGFPWIDAIMT 343
Query: 433 ELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGN 491
+L G++ + R A FL R D+ I W G + FE LLD D N GNW + +
Sbjct: 344 QLRQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAF 403
Query: 492 DPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALPKE 528
R F + + D EG+Y+ +LP LK P +
Sbjct: 404 FHHYTRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSK 440
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 376 (137.4 bits), Expect = 7.9e-33, P = 7.9e-33
Identities = 132/457 (28%), Positives = 204/457 (44%)
Query: 87 FRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADL 146
FR LR+ DN ALL A SSE+V PVY +D ++ H G ALR FL++ L DL
Sbjct: 27 FRKGLRLHDNPALLAALQSSEVVYPVYILDRAFMTSSMHIG-----ALRWHFLLQSLEDL 81
Query: 147 RKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVY--AQKETCSEELNVE-RLVRKNLQQ 203
R +L G LL+ G+ E ++ + + V A+ E +E+ R + + L
Sbjct: 82 RSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRGLGEELGF 141
Query: 204 VVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIEAKCTVRGCIR 263
VLS + L+L GT P P Y F + + +R
Sbjct: 142 QVLSLMGHSLYNTQRILELNGGT--------P------PLTYKRFLRILSLLGDPEVPVR 187
Query: 264 IPSS--F---GPPP-SVVDWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYF--- 314
P++ F PP + + VPL L++ +S + GGES L R+ ++
Sbjct: 188 NPTAEDFQRCSPPELGLAECYGVPLPTDLKIPPESISP---WRGGESEGLQRLEQHLADQ 244
Query: 315 -WKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPR-YIYEEVKSYERERVANDSTYW 372
W K K N +L P +T SP+ ++G +S R + Y Y + + +
Sbjct: 245 GWVASFTKP-KTVPNSLL-PS-TTGLSPYFSTGCLSVRSFFYRLSNIYAQAKHHSLPPVS 301
Query: 373 VLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMK 432
+ +L+WR++F ++ N G P L+ +W +D + W+ TG+P IDA M
Sbjct: 302 LQGQLLWREFFYTVASATPNFTKMAGNPICLQIRWYEDAERLHKWKTAQTGFPWIDAIMT 361
Query: 433 ELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGN 491
+L G++ + R A FL R D+ I W G + FE LLD D N GNW + +
Sbjct: 362 QLRQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAF 421
Query: 492 DPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALPKE 528
R F + + D EG+Y+ +LP LK P +
Sbjct: 422 FHHYTRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSK 458
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 360 (131.8 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 113/402 (28%), Positives = 184/402 (45%)
Query: 132 GALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEEL 191
G+ +L + D++K L G L+IR G +E I SL + G AVY + L
Sbjct: 43 GSASKWWLHHAIIDVKKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPDRL 102
Query: 192 NVERLVRKNLQQV-VLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRK 250
+ ++ L+ ++ + N P + T Y + PF +++ H K
Sbjct: 103 QSNQKMKMMLEHKGMICKEFNSHLLLEPWVIKKKDNTEYKVFT-PF-YNAFQKQVIH--K 158
Query: 251 SIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRV 310
I +++G +P S SV + +P I H + + E A
Sbjct: 159 PISKVQSIKGGNSLPVSL----SVSELHLLPTIPWTS-HMESIWEPT-----EEGAYKTW 208
Query: 311 NEYFWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRYIYEEV--KSYERE-RVAN 367
E+F K L Y E R + + + +P+L+ G IS + IY + KS E + +
Sbjct: 209 KEFFSSK--LASYSEGR-DFPNQNAHSMLAPYLSFGQISVKLIYHYLINKSTESQCSLFE 265
Query: 368 DSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLI 427
+ +L+WR++ ++ Y + + + W+ +++L W+ G TGYP I
Sbjct: 266 KQVNSFIRQLIWREFSYYLLYHYPFTAYKPLNKSFEHFPWNNEEELLRVWQKGDTGYPFI 325
Query: 428 DANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 487
DA M+EL TGFM NR R SFLV+ + I W+ GA+WF LLD D +N W + A
Sbjct: 326 DAGMRELWQTGFMHNRTRMAVASFLVKHLLIPWQEGAKWFMDTLLDADIANNTMGWQWVA 385
Query: 488 GVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKALPKE 528
G G D R F+ Q + +D+ GEY+ W+P+LK +P +
Sbjct: 386 GSGADASPYFRIFNPITQGEKFDKNGEYIRKWVPELKDMPNK 427
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 37/98 (37%), Positives = 50/98 (51%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
IV F+ D R+ DN AL +A S E+V PVY H +T F G+ +L +
Sbjct: 6 IVMFQKDFRLYDNPALFEAAQSGEVV-PVYV----HDET---FSM---GSASKWWLHHAI 54
Query: 144 ADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVY 181
D++K L G L+IR G +E I SL + G AVY
Sbjct: 55 IDVKKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVY 92
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 368 (134.6 bits), Expect = 8.0e-32, P = 8.0e-32
Identities = 126/481 (26%), Positives = 219/481 (45%)
Query: 61 HIVEETFGR-YTSKALKRNGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRH 119
H++ G ++ KA + I WFR LR+ DN AL+ A + P++ +DP
Sbjct: 10 HVIRRLCGGLHSPKATTMSHN--TIHWFRKGLRLHDNPALIAALKDCRHIYPLFLLDPWF 67
Query: 120 SQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHA 179
+ T + G R +FLIE L DL +L L + G P E++P L K +
Sbjct: 68 PKNT------RIGINRWRFLIEALKDLDSSLKKLNSRLFVVRGSPTEVLPKLFKQWKITR 121
Query: 180 VYAQKETCSEELNVERLVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHS 239
+ + +T + ++ V K L+ + + T P++ T+Y++D I +++
Sbjct: 122 LTFEVDTEPYSQSRDKEVMK------LAKEYGVEVT--PKIS----HTLYNIDRIIDENN 169
Query: 240 S-LPDVYTHFRKSIEAKCTVRGCIRIPSSF---GPPPSVVD-----WGSVPLIEQLELHS 290
P Y + ++A + I P++ G + D +G +P +E L L +
Sbjct: 170 GKTPMTYIRLQSVVKAMGHPKKPIPAPTNEDMRGVSTPLSDDHEEKFG-IPTLEDLGLDT 228
Query: 291 PKVSKGMRFVGGESAALGRVNEYFWKKD-LLKVYK-ETRNEMLGPDYSTKFSPWLASGSI 348
+ + F GGE AL R++E+ + + + K K +T L P +T SP++ G +
Sbjct: 229 SSLGPHL-FPGGEQEALRRLDEHMERTNWVCKFEKPKTSPNSLIPS-TTVLSPYVRFGCL 286
Query: 349 SPRYIYEEVKSYERERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWS 408
S R + + R + +D + +L+WR++F ++ N G ++ W
Sbjct: 287 SARIFWWRLADVYRGKTHSDPPVSLHGQLLWREFFYTTAVGIPNFNKMEGNSACVQVDWD 346
Query: 409 QDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWF 467
+ + +WR+ TG+P IDA M +L G++ + R FL R D+ I W G + F
Sbjct: 347 NNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVF 406
Query: 468 ETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALPK 527
E LLD D N GNW + + + R +S + D+ G+Y+ +LP LK P
Sbjct: 407 EELLLDSDWSLNAGNWQWLSASTFFHQYFRVYSPIAFGKKTDKHGDYIKKYLPVLKKFPT 466
Query: 528 E 528
E
Sbjct: 467 E 467
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 303 (111.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 69/219 (31%), Positives = 123/219 (56%)
Query: 317 KDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRY----IYEEVKSYERERVANDSTYW 372
++ ++ Y + R + + ++ SP+LA G +S R +Y E E ++ + W
Sbjct: 218 RERVQDYHQAR-DFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGE---LSEGAQVW 273
Query: 373 VLFELMWRDYFRFI-----SLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLI 427
L EL+WR++++ + +L G +LE+ W+ ++K F+ W +G TGYP++
Sbjct: 274 -LSELIWREFYQHLVAIEPNLSKSRDFVEWGA--RLEW-WNDNEK-FQLWCEGKTGYPIV 328
Query: 428 DANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 487
DA M++L+ TG+M NR R I SFL +D+ IDWR G +F + L+D D +N G W + A
Sbjct: 329 DAAMRQLNQTGWMHNRLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCA 388
Query: 488 GVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKAL 525
G D + R F+ Q + +D G+++ W+P+L+++
Sbjct: 389 STGCDGQPYFRIFNPVSQGEKFDPNGDFIRRWVPELRSV 427
Score = 104 (41.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
+VWFR DLR DN AL A +S + V +Y P Q H P ++A + L
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPE--QWHQHHLAP----IQADLIWRRL 56
Query: 144 ADLRKNLMNRGLNLLIRHGKPEEI----IPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
A+L++ L + L + + + LAK+ A V A ++ +E ++L ++
Sbjct: 57 AELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQ 116
Query: 200 NL-QQVVLSSQSNDKSTNHP 218
L +Q ++ S +DK P
Sbjct: 117 LLSEQGIIWSAFDDKCVLPP 136
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 303 (111.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 69/219 (31%), Positives = 123/219 (56%)
Query: 317 KDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRY----IYEEVKSYERERVANDSTYW 372
++ ++ Y + R + + ++ SP+LA G +S R +Y E E ++ + W
Sbjct: 218 RERVQDYHQAR-DFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGE---LSEGAQVW 273
Query: 373 VLFELMWRDYFRFI-----SLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLI 427
L EL+WR++++ + +L G +LE+ W+ ++K F+ W +G TGYP++
Sbjct: 274 -LSELIWREFYQHLVAIEPNLSKSRDFVEWGA--RLEW-WNDNEK-FQLWCEGKTGYPIV 328
Query: 428 DANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 487
DA M++L+ TG+M NR R I SFL +D+ IDWR G +F + L+D D +N G W + A
Sbjct: 329 DAAMRQLNQTGWMHNRLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCA 388
Query: 488 GVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKAL 525
G D + R F+ Q + +D G+++ W+P+L+++
Sbjct: 389 STGCDGQPYFRIFNPVSQGEKFDPNGDFIRRWVPELRSV 427
Score = 104 (41.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
+VWFR DLR DN AL A +S + V +Y P Q H P ++A + L
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPE--QWHQHHLAP----IQADLIWRRL 56
Query: 144 ADLRKNLMNRGLNLLIRHGKPEEI----IPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
A+L++ L + L + + + LAK+ A V A ++ +E ++L ++
Sbjct: 57 AELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQ 116
Query: 200 NL-QQVVLSSQSNDKSTNHP 218
L +Q ++ S +DK P
Sbjct: 117 LLSEQGIIWSAFDDKCVLPP 136
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 352 (129.0 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 136/492 (27%), Positives = 233/492 (47%)
Query: 77 RNGKGVAIVWFRNDLRVLDNEALLKAWD-----SSEMVLPVYCVDPRHSQTTYHFGFPKT 131
R+GK A++WFR DLR+ DN+A A D + + +Y P SQ H P
Sbjct: 7 RSGKH-ALMWFRQDLRLTDNQAFTAACDWVRQHHAAKLKAIYIATP--SQWHQHDIAP-- 61
Query: 132 GALRAQFLIECLADLRKNLMNRGLNL-LIRHGKPEEIIPSLAKSF-GAHA---VYAQKET 186
++ F+ + L + L++ G+ LI+ +I P+ S+ H+ V+A +E
Sbjct: 62 --IQLDFIQRHVNLLAQGLVSLGVEFELIQLDSFRDI-PAFLTSYCEEHSIGRVFAGQEP 118
Query: 187 CSEELNVERLVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYT 246
E+N ++ + ++ + S S++ P L MY + PF
Sbjct: 119 ---EINEQKRDQACVEAGIPLSLSDEHCLLPPGTVLNLSGDMYRVFT-PFSRK------- 167
Query: 247 HFRKSIEAKCTVRGCIRIPSSFG-----PPPSVV-DWGSVPLIEQLELHSPK-------- 292
+R+ + AK + + +P+ G P P + GS L ++ S K
Sbjct: 168 -WRE-VAAKQAILP-LGVPAPLGSILSEPKPLFFKNIGSTYLAASKDIASSKKGFNQTAP 224
Query: 293 --VSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISP 350
+ ++ GE A +N++ +K ++ YK+ R + D ++ SP+LA G +SP
Sbjct: 225 NPLISSEQWAAGEGQAKRLLNQFIQQK--VQDYKQDR-DFPAIDGTSVISPYLAIGVLSP 281
Query: 351 RYIYEEVKSYERERVANDST---YWVLFELMWRDYFR-----FISLKYGNSLFHLGGPRK 402
R + E + +D++ W L EL+WR+++R F L GN+ F+
Sbjct: 282 RQCVAALLQRFPEVIVDDTSPGRTW-LNELIWREFYRHLLVAFPDLSKGNN-FNRQADHV 339
Query: 403 LEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRM 462
L W +Q F +W +G TGYP++DA M++L+ TG+M NR R + SFL + + IDWR
Sbjct: 340 L---WRNNQSEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLIDWRW 396
Query: 463 GAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQ 521
G +F L+D D +N G W + AG G D + R F+ Q++ +D +G ++ +LP+
Sbjct: 397 GERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFIRKYLPE 456
Query: 522 LKALPKERRNFP 533
L + R + P
Sbjct: 457 LASWGVTRLHQP 468
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 347 (127.2 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 130/465 (27%), Positives = 211/465 (45%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
++W R+DLRV DN AL A + L VY + P +Q H + F + L
Sbjct: 3 LIWLRSDLRVHDNTALTAAMERGP-TLAVYLLSP--AQWRSH----DDADCKVDFWLRNL 55
Query: 144 ADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRKNLQQ 203
+L K L + LLIR + P + + C++ L +E L N Q+
Sbjct: 56 VELEKALGALNVPLLIREADTWDQAPEVLSTL-----------CTQ-LKIEGL-HLN-QE 101
Query: 204 VVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSS-LPDVYTHFRKSIEAK--CTVRG 260
++ D++ K T Y LD + F S L +F+ + K C R
Sbjct: 102 YGINETRRDQAVQKALEKAGVQVTSY-LDQLLFKPGSILTKTGNYFQVFTQFKKVCYNRM 160
Query: 261 CIRIPSSFGPPPSV----VDWGSVPLIEQLE-LHSPKVSKGMR--FVGGESAALGRVNEY 313
+P P + + S+P +Q+E +P SK +R + GE+ A R+ +
Sbjct: 161 HQAMPQPVRTPKAQQSLSIKSDSIP--DQVEGFATP--SKALRDLWPAGEAEARRRMATF 216
Query: 314 FWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRY-IYEEVKSYERERVAND--ST 370
+ + YK R+ P S + S +LA+G ISPR ++ + S + E D +
Sbjct: 217 ADAQ--ISYYKTERDFPAKPGTS-QLSAYLAAGVISPRQCLHAALGSNQGEFETGDVGTV 273
Query: 371 YWVLFELMWRDYFRFISLKYGNSLFHLG-GPRKLEYKWSQDQKLFESWRDGCTGYPLIDA 429
W+ EL+WR++++ + Y H P KW + +W++ TG P+IDA
Sbjct: 274 TWIN-ELLWREFYKHTLVGYPRVSRHRAFRPETEALKWRDAPEELLAWQEARTGLPIIDA 332
Query: 430 NMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGV 489
M++L TG+M NR R + FL +++ IDW G +F L+D D SN G W + +
Sbjct: 333 AMRQLLETGWMHNRLRMVVAMFLTKNLLIDWHEGERFFMRHLIDGDLASNNGGWQWSSST 392
Query: 490 GNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKALPKERRNFP 533
G D R F+ Q++ +D EG ++ WLP+L L K++ + P
Sbjct: 393 GTDSAPYFRIFNPLSQSERFDPEGVFIKRWLPELADLNKKQIHDP 437
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 326 (119.8 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 72/205 (35%), Positives = 117/205 (57%)
Query: 340 SPWLASGSISPRYIYEEVKSYERER-VANDSTY--WVLFELMWRDYFRFISLKYGNSLFH 396
SP+LA+G ISPR++ + + + VA+DS W L E++WR+++R + H
Sbjct: 241 SPYLAAGVISPRFVLRLLLNKHPDLLVASDSEEFSW-LNEIIWREFYRHLLFHEQRLCKH 299
Query: 397 LGGPRKL-EYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRD 455
E W D LF++W G TGYPL+DA M++L+ TG+M NR R + SFL +
Sbjct: 300 QCYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKH 359
Query: 456 MGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRED-RYFSIPKQAQNYDREGEY 514
+ IDWR+G ++F L+D D SN G W + A G D + R F+ +Q++ +D +G +
Sbjct: 360 LLIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIRQSERFDPKGVF 419
Query: 515 VAYWLPQLKALPKERRNFPGGSYIE 539
+ ++P+L + + +FP YI+
Sbjct: 420 IRKYIPELNNISDKAIHFPH-QYIK 443
Score = 56 (24.8 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 84 IVWFRNDLRVLDNEAL 99
++W RNDLR DN AL
Sbjct: 2 LLWLRNDLRTHDNPAL 17
>SGD|S000005913 [details] [associations]
symbol:PHR1 "DNA photolyase involved in photoreactivation"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000719 "photoreactive repair" evidence=TAS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IEA;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;TAS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 SGD:S000005913 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 EMBL:BK006948 GO:GO:0000166
GO:GO:0003677 GO:GO:0003729 GO:GO:0018298 GO:GO:0000719
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 GeneTree:ENSGT00500000044813 KO:K01669
GO:GO:0003904 EMBL:X03183 EMBL:M11578 EMBL:Z75294 PIR:S67298
RefSeq:NP_015031.1 ProteinModelPortal:P05066 SMR:P05066
DIP:DIP-6327N IntAct:P05066 MINT:MINT-688138 STRING:P05066
PaxDb:P05066 PeptideAtlas:P05066 EnsemblFungi:YOR386W GeneID:854568
KEGG:sce:YOR386W CYGD:YOR386w OMA:CEDANAR OrthoDB:EOG4XPTQ3
NextBio:977015 Genevestigator:P05066 GermOnline:YOR386W
Uniprot:P05066
Length = 565
Score = 319 (117.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 82/255 (32%), Positives = 133/255 (52%)
Query: 303 ESAALGRVNEYFWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRYIYEEV-KSYE 361
E AAL R+ ++ K Y + +ML ++ S ++ +G IS R I + +S
Sbjct: 308 EEAALSRLKDFLGTKS--SKYNNEK-DMLYLGGTSGLSVYITTGRISTRLIVNQAFQSCN 364
Query: 362 RERVA-----NDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLE---YKWSQDQKL 413
+ ++ N ST + E+ WRD++R + + +G P +L+ KW +
Sbjct: 365 GQIMSKALKDNSSTQNFIKEVAWRDFYRHCMCNWPYT--SMGMPYRLDTLDIKWENNPVA 422
Query: 414 FESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLD 473
FE W G TG P++DA M++L TG+++NR R I SFL +++ IDWR G WF L+D
Sbjct: 423 FEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLID 482
Query: 474 YDPCSNYGNWTYGAGVGNDPRED-RYFSIPKQAQNYDREGEYVAYWLPQLKALPKER-RN 531
D SN G W + + G D + R F++ QA+ YD + +V W+P+L + +R N
Sbjct: 483 GDSSSNVGGWGFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPELISSENKRPEN 542
Query: 532 FPGGSYIEQIVSLKH 546
+P + +V LKH
Sbjct: 543 YP-----KPLVDLKH 552
Score = 64 (27.6 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 73 KALKRNGKGVAIV--WFRNDLRVLDNEALLKA 102
K K + + V+ V WFRNDLR+ DN L K+
Sbjct: 65 KKQKTSFENVSTVMHWFRNDLRLYDNVGLYKS 96
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 332 (121.9 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 102/385 (26%), Positives = 172/385 (44%)
Query: 150 LMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRKNLQQVVLSSQ 209
L + G L++R G ++ +L GA AV+ +E + + + ++ LQQ + ++
Sbjct: 65 LGDMGSRLILRRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTALQQAGIEAR 124
Query: 210 SNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIEAKCTVRGCIRIPSSFG 269
S G ++ + VYT F +++ + V P+
Sbjct: 125 S------------FGGALLFEPWTVETGAGGFYKVYTPFWRAVSQR-EVSAPDPAPARVR 171
Query: 270 PPPSVVDWGSVPLIEQLELHSPKVSKGMRFVG-----GESAALGRVNEYFWKKDLLKVYK 324
PP + W + L +P + +G V GE+AAL R++ + + Y
Sbjct: 172 PPEA---WPGSEALSDWGLGAP-MRRGAAVVATHQAPGEAAALERLDRFIATG--IGQYD 225
Query: 325 ETRNEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLFELMWRDYFR 384
R+ G ST S L+ G I PR ++ + T+ L +L+WRD+
Sbjct: 226 ACRDLPAGDGTST-LSDALSLGEIGPRTLWHRAGEAAHKGAQGAETF--LKQLVWRDFAY 282
Query: 385 FISLKYGNSLFHLGGPRKLEYKWSQD--QKLFESWRDGCTGYPLIDANMKELSMTGFMSN 442
+ + L P + W+ D F +W G TG PL+DA M+E+ +TG M N
Sbjct: 283 HLMYHTPHLLSENWRPGWEVFPWATDPADPGFVAWTRGRTGVPLVDAAMREMYVTGRMHN 342
Query: 443 RGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRED-RYFSI 501
R R IA S+L + + + W++G +WF CL D+DP +N W + AG G D R F+
Sbjct: 343 RARMIAASYLTKHLMVHWKLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRIFNP 402
Query: 502 PKQAQNYDREGEYVAYWLPQLKALP 526
QA+ +D +G Y +W+ + +A P
Sbjct: 403 ETQAKKFDPKGRYRNHWIAEGQAEP 427
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 335 (123.0 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 123/458 (26%), Positives = 200/458 (43%)
Query: 86 WFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLAD 145
WFR LR+ DN +L + + V VY +DP + G G R +FL++CL D
Sbjct: 8 WFRKGLRLHDNPSLRDSILGAHSVRCVYILDP------WFAGSSNVGISRWRFLLQCLED 61
Query: 146 LRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRKNLQQVV 205
L +L L + G+P ++ P L K + + + + + SE ER
Sbjct: 62 LDASLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYD--SEPFGKER-------DAA 112
Query: 206 LSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSI---EAKCTVRGC 261
+ +N+ ++ + T+Y LD I + P Y F+ I EA T
Sbjct: 113 IKKLANEAGV---EVIVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAET 169
Query: 262 IRIPSSFGP--PPSVVDWGS---VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWK 316
I GP P D VP +E+L + +S + + GGE+ AL R+ + +
Sbjct: 170 ITA-EVMGPCTTPLSDDHDEKFGVPSLEELGFDTEGLSSAV-WPGGETEALTRLERHLER 227
Query: 317 KDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWV 373
K + ++ R N +L T SP+L G +S R Y ++ R+ N S
Sbjct: 228 KAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLS 285
Query: 374 LF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDAN 430
L+ +L+WR++F + N F G P ++ W ++ + W +G TG+P IDA
Sbjct: 286 LYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAI 343
Query: 431 MKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGV 489
M +L G++ + R FL R D+ I W G + FE LLD D N G+W +
Sbjct: 344 MTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMW-LSC 402
Query: 490 GNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
+ ++ + P + D G+Y+ +LP L+ P
Sbjct: 403 SSFFQQFFHCYCPVSFGRRTDPNGDYIRRYLPVLRGFP 440
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 331 (121.6 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 123/463 (26%), Positives = 198/463 (42%)
Query: 80 KGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
+ + WFR LR+ DN AL + ++ Y V P + + GA R +FL
Sbjct: 5 RSTLVHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVGANRWRFL 64
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
+ L DL L L + GKP E+ P + KS+ + ET E +V R
Sbjct: 65 QQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTF--ETDIEPYSVTRDAA- 121
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLD-DIPFDHSSLPDVYTHFRKSIEAKCTV 258
+Q+ L+ + H T+Y+ + I + P Y F +E + V
Sbjct: 122 -VQK--LAKAEGVRVETH------CSHTIYNPELVIAKNLGKAPITYQKFLGIVE-QLKV 171
Query: 259 RGCIRIPSSFG----PPPSVVDWGS-----VPLIEQLELHSPKVSKGMRFVGGESAALGR 309
+ +P PP V+ P ++QL + P+ +F GGE+ AL R
Sbjct: 172 PKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQL-VKRPEELGPNKFPGGETEALRR 230
Query: 310 VNEYFWKKDLLKVYK----ETRNEMLGPDYSTKFSPWLASGSISPRYIYEEVKSY-ERER 364
+ E KD + V + T L P +T SP+L G +S R +++K +R+
Sbjct: 231 MEESL--KDEIWVARFEKPNTAPNSLEPS-TTVLSPYLKFGCLSARLFNQKLKEIIKRQP 287
Query: 365 VANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFESWRDGCTGY 424
+ ++ +LMWR+++ ++ N LG ++ W + E+W G TGY
Sbjct: 288 KHSQPPVSLIGQLMWREFYYTVAAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGY 347
Query: 425 PLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNW 483
P IDA M++L G++ + R FL R D+ I W G FE LLD D N GNW
Sbjct: 348 PFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNW 407
Query: 484 TYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALP 526
+ + + R +S + D +G Y+ ++P+L P
Sbjct: 408 MWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYP 450
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 266 (98.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 77/257 (29%), Positives = 122/257 (47%)
Query: 279 SVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYF-----WKKDLLKVYKETRNEMLGP 333
+VP + L L +V + + GGES AL R+ ++F W + K + N +L P
Sbjct: 213 AVPSLADLGL---QVEAEVLWPGGESHALQRLEKHFQSQQGWVANFSKP-RTIPNSLL-P 267
Query: 334 DYSTKFSPWLASGSISPRYIYEEVKS-YERERVANDSTYWVLFELMWRDYFRFISLKYGN 392
+T SP+L+ G +S R Y + S Y + + + + +++WR++F ++ N
Sbjct: 268 S-TTGLSPYLSLGCLSVRTFYHRLNSIYAQSKNHSLPPVSLQGQVLWREFFYTVASATPN 326
Query: 393 SLFHLGGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFL 452
G L+ W D + E WR TG+P IDA M +L G++ + R FL
Sbjct: 327 FTKMEGNSICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFL 386
Query: 453 VR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDRE 511
R D+ I W G + FE LLD D N GNW + + + R F + + D +
Sbjct: 387 TRGDLWISWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTDPQ 446
Query: 512 GEYVAYWLPQLKALPKE 528
GEY+ +LP LK P +
Sbjct: 447 GEYLRKYLPVLKNFPSQ 463
Score = 114 (45.2 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 33/90 (36%), Positives = 43/90 (47%)
Query: 87 FRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADL 146
FR LR+ DN +LL A SS + PVY +D Q H G ALR +FL++ L DL
Sbjct: 30 FRKGLRLHDNPSLLGALASSSALYPVYVLDRVFLQGAMHMG-----ALRWRFLLQSLEDL 84
Query: 147 RKNLMNRGLNLLIRHGKPEEIIPSLAKSFG 176
L G L + G I+ L +G
Sbjct: 85 DTRLQAIGSRLFVLCGSTANILRELVAQWG 114
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 330 (121.2 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 122/465 (26%), Positives = 205/465 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + +S + + GGE+ AL R
Sbjct: 164 EMPADTITSDV-IGKCTTPLSDDHDEKYG-VPSLEELGFDTDGLSSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 330 (121.2 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 122/465 (26%), Positives = 205/465 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + +S + + GGE+ AL R
Sbjct: 164 EMPADTITSDV-IGKCTTPLSDDHDEKYG-VPSLEELGFDTDGLSSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 329 (120.9 bits), Expect = 5.6e-27, P = 5.6e-27
Identities = 122/465 (26%), Positives = 205/465 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + +S + + GGE+ AL R
Sbjct: 164 EIPVETITSEV-IEKCTTPLSDDHDEKYG-VPSLEELGFDTDGLSSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 329 (120.9 bits), Expect = 5.6e-27, P = 5.6e-27
Identities = 122/465 (26%), Positives = 205/465 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + +S + + GGE+ AL R
Sbjct: 164 EIPVETITSEV-IEKCTTPLSDDHDEKYG-VPSLEELGFDTDGLSSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKR 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 243 (90.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 71/255 (27%), Positives = 121/255 (47%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + +S + + GGE+ AL R+ + +K + ++ R N +L
Sbjct: 192 VPSLEELGFDTDGLSSAV-WPGGETEALTRLERHLERKAWVANFERPRMNANSLLASP-- 248
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y ++ ++ N S L+ +L+WR++F + N F
Sbjct: 249 TGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFF--YTAATNNPRF 306
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 307 DKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQ-AQNYDRE 511
R D+ I W G + FE LLD D N G+W + + ++ + P + D
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSINAGSWMW-LSCSSFFQQFFHCYCPVGFGRRTDPN 425
Query: 512 GEYVAYWLPQLKALP 526
G+Y+ +LP L+ P
Sbjct: 426 GDYIRRYLPVLRGFP 440
Score = 135 (52.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER 109
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 288 (106.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 74/217 (34%), Positives = 110/217 (50%)
Query: 326 TRNEMLGPDYSTKF-SPWLASGSISPRYIYEEVK------SYERERVANDSTYWVLFELM 378
++N +T F SP L G +S R ++ V+ + E +S L +
Sbjct: 236 SKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIG 295
Query: 379 WRDYFRFISLKYGNSLFH-LGGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMT 437
R+Y R+IS + S L G K + W+ D+ F++WR G TGYPL+DA M+EL T
Sbjct: 296 LREYSRYISFNHPYSHERPLLGHLKF-FPWAVDENYFKAWRQGRTGYPLVDAGMRELWAT 354
Query: 438 GFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-D 496
G++ +R R + SF V+ + + WR G ++F LLD D S+ W Y G D RE D
Sbjct: 355 GWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFD 414
Query: 497 RYFSIPKQAQNYDREGEYVAYWLPQLKALPKERRNFP 533
R + + +D GEYV WLP+L LP + + P
Sbjct: 415 RIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHP 451
Score = 88 (36.0 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 81 GVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLI 140
G +IVWFR DLRV DN AL A + V+ ++ P + YH P G + +L
Sbjct: 12 GCSIVWFRRDLRVEDNPALAAAVRAGP-VIALFVWAPEE-EGHYH---P--GRVSRWWLK 64
Query: 141 ECLADLRKNLMNRGLNLLIRHGKPEEI-IPSLAKSFGAHAVY 181
LA L +L + G L+ + + + KS GA ++
Sbjct: 65 NSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIF 106
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 326 (119.8 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 121/465 (26%), Positives = 206/465 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL LL+ G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + +S + + GGE+ AL R
Sbjct: 164 EIPVETITSEV-IEKCTTPLSDDHDEKYG-VPSLEELGFDTDGLSSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + ++ + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERRAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQ-IACSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R +AC D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 324 (119.1 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 123/466 (26%), Positives = 207/466 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ V VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALRECIRGADTVRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER--LV 197
++CL DL NL L + G+P ++ P L K + + + + SE ER +
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEYD--SEPFGKERDAAI 113
Query: 198 RKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSIEAKC 256
+K L+S++ + +++ T+Y LD I + P Y F+ I
Sbjct: 114 KK------LASEAGVEVI----VRI--SHTLYDLDKIIELNGGQPPLTYKRFQTLISRME 161
Query: 257 TVRGCIRI--PSSFGPPPSVVD------WGSVPLIEQLELHSPKVSKGMRFVGGESAALG 308
+ + P + V +G VP +E+L + + + + GGE+ AL
Sbjct: 162 PLEMPVETITPEVMQKCTTPVSDDHDEKYG-VPSLEELGFDTDGLPSAV-WPGGETEALT 219
Query: 309 RVNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERV 365
R+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 220 RLERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVK 277
Query: 366 ANDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCT 422
N S L+ +L+WR++F + N F G P ++ W ++ + W +G T
Sbjct: 278 KNSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRT 335
Query: 423 GYPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYG 481
G+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G
Sbjct: 336 GFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAG 395
Query: 482 NWTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
+W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 396 SWMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 324 (119.1 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 123/466 (26%), Positives = 207/466 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ V VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALRECIRGADTVRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER--LV 197
++CL DL NL L + G+P ++ P L K + + + + SE ER +
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEYD--SEPFGKERDAAI 113
Query: 198 RKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSIEAKC 256
+K L+S++ + +++ T+Y LD I + P Y F+ I
Sbjct: 114 KK------LASEAGVEVI----VRI--SHTLYDLDKIIELNGGQPPLTYKRFQTLISRME 161
Query: 257 TVRGCIRI--PSSFGPPPSVVD------WGSVPLIEQLELHSPKVSKGMRFVGGESAALG 308
+ + P + V +G VP +E+L + + + + GGE+ AL
Sbjct: 162 PLEMPVETITPEVMQKCTTPVSDDHDEKYG-VPSLEELGFDTDGLPSAV-WPGGETEALT 219
Query: 309 RVNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERV 365
R+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 220 RLERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVK 277
Query: 366 ANDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCT 422
N S L+ +L+WR++F + N F G P ++ W ++ + W +G T
Sbjct: 278 KNSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRT 335
Query: 423 GYPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYG 481
G+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G
Sbjct: 336 GFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAG 395
Query: 482 NWTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
+W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 396 SWMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 324 (119.1 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 123/466 (26%), Positives = 207/466 (44%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ V VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALRECIRGADTVRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER--LV 197
++CL DL NL L + G+P ++ P L K + + + + SE ER +
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEYD--SEPFGKERDAAI 113
Query: 198 RKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSIEAKC 256
+K L+S++ + +++ T+Y LD I + P Y F+ I
Sbjct: 114 KK------LASEAGVEVI----VRI--SHTLYDLDKIIELNGGQPPLTYKRFQTLISRME 161
Query: 257 TVRGCIRI--PSSFGPPPSVVD------WGSVPLIEQLELHSPKVSKGMRFVGGESAALG 308
+ + P + V +G VP +E+L + + + + GGE+ AL
Sbjct: 162 PLEMPVETITPEVMQKCTTPVSDDHDEKYG-VPSLEELGFDTDGLPSAV-WPGGETEALT 219
Query: 309 RVNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERV 365
R+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 220 RLERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVK 277
Query: 366 ANDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCT 422
N S L+ +L+WR++F + N F G P ++ W ++ + W +G T
Sbjct: 278 KNSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRT 335
Query: 423 GYPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYG 481
G+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G
Sbjct: 336 GFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAG 395
Query: 482 NWTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
+W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 396 SWMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 323 (118.8 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 120/465 (25%), Positives = 204/465 (43%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + + P D +G VP +E+L + + + + GGE+ AL R
Sbjct: 164 EIPVETITSEV-VEKCTTPLSDDHDEKYG-VPSLEELGFDTDGLPSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 440
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 250 (93.1 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 70/254 (27%), Positives = 120/254 (47%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 211 VPSLEELGFPTEGLGPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP-- 267
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y + ++ N + LF +L+WR++F + N F
Sbjct: 268 TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF--YTAATNNPRF 325
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 326 DRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 385
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREG 512
R D+ + W G F+ LLD D N G+W + + + + + D G
Sbjct: 386 RGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSG 445
Query: 513 EYVAYWLPQLKALP 526
+Y+ +LP+LKA P
Sbjct: 446 DYIRRYLPKLKAFP 459
Score = 123 (48.4 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN ALL A + V VY +DP + ++ G R +FL++
Sbjct: 24 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASS------SVGINRWRFLLQS 77
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
L DL +L L + G+P ++ P L K +G + + + SE ER
Sbjct: 78 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYD--SEPFGKER 128
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 323 (118.8 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 117/452 (25%), Positives = 199/452 (44%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN AL +A + ++ V VY +DP + G G R +FL+E
Sbjct: 5 SVHWFRKGLRLHDNPALQEALNGADTVRCVYILDP------WFAGSANVGVNRWRFLLES 58
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER--LVRKN 200
L DL +L L + G+P ++ P L K + + + + SE ER + K
Sbjct: 59 LEDLDTSLRKLNSRLSVVRGQPTDVFPRLFKEWNVTRLTFEYD--SEPYGKERDAAIIKM 116
Query: 201 LQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDH-SSLPDVYTHFRKSIEAKCTVR 259
Q+ + + + T + ++I H + F ++ + RK + T
Sbjct: 117 AQEYGVETVVRNSHTLYNPDRIIEMNN--HSPPLTFKRFQAIVNRLELPRKPLPT-ITQE 173
Query: 260 GCIRIPSSFGPPPSVVDWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDL 319
R + +G VP +E+L + S + + GGE+ AL R+N++ +K
Sbjct: 174 QMARCRTQISDNHDE-HYG-VPSLEELGFRTQGDSLHV-WKGGETEALERLNKHLDRKAW 230
Query: 320 LKVYKETR--NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-E 376
+ ++ R + L P T SP+L G +S R Y ++ + S LF +
Sbjct: 231 VANFERPRISGQSLFPS-PTGLSPYLRFGCLSCRVFYYNLRDLFMKLRRRSSPPLSLFGQ 289
Query: 377 LMWRDYFRFISLKYGNSLFHL-GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELS 435
L+WR++F N H+ G P ++ W + + W +G TG+P IDA M +L
Sbjct: 290 LLWREFFYTAGTNNPN-FDHMEGNPICVQIPWDHNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 436 MTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPR 494
G++ + R FL R D+ I W G + FE LLD D N G+W + + +
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWESGMKVFEELLLDADWSVNAGSWMWLSCSAFFQQ 408
Query: 495 EDRYFSIPKQAQNYDREGEYVAYWLPQLKALP 526
+ + D G+Y+ ++P+LK P
Sbjct: 409 FFHCYCPVGFGRRTDPSGDYIRRYIPKLKDYP 440
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 250 (93.1 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 70/254 (27%), Positives = 120/254 (47%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 232 VPSLEELGFPTEGLGPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP-- 288
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y + ++ N + LF +L+WR++F + N F
Sbjct: 289 TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF--YTAATNNPRF 346
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 347 DRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 406
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREG 512
R D+ + W G F+ LLD D N G+W + + + + + D G
Sbjct: 407 RGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSG 466
Query: 513 EYVAYWLPQLKALP 526
+Y+ +LP+LKA P
Sbjct: 467 DYIRRYLPKLKAFP 480
Score = 123 (48.4 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN ALL A + V VY +DP + ++ G R +FL++
Sbjct: 45 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASS------SVGINRWRFLLQS 98
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
L DL +L L + G+P ++ P L K +G + + + SE ER
Sbjct: 99 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYD--SEPFGKER 149
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 247 (92.0 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 276 DWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLG 332
D VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 206 DTYGVPSLEELGFPTEGLGPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLA 264
Query: 333 PDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYG 391
T SP+L G +S R Y + ++ N + LF +L+WR++F +
Sbjct: 265 SP--TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF--YTAATN 320
Query: 392 NSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIAC 449
N F G P ++ W ++ + W +G TG+P IDA M +L G++ + R
Sbjct: 321 NPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVA 380
Query: 450 SFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNY 508
FL R D+ + W G F+ LLD D N G+W + + + + +
Sbjct: 381 CFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRT 440
Query: 509 DREGEYVAYWLPQLKALP 526
D G+Y+ +LP+LK P
Sbjct: 441 DPSGDYIRRYLPKLKGFP 458
Score = 124 (48.7 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 71 TSKALKRNGKGVAIV-WFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFP 129
T A G + V WFR LR+ DN ALL A + V VY +DP + ++
Sbjct: 10 TVPAQSMGADGASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASS------ 63
Query: 130 KTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSE 189
G R +FL++ L DL +L L + G+P ++ P L K +G + + + SE
Sbjct: 64 SVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYD--SE 121
Query: 190 ELNVER 195
ER
Sbjct: 122 PFGKER 127
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 289 (106.8 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 82/240 (34%), Positives = 123/240 (51%)
Query: 302 GESAALGRVNEYFWKKDLLKVYKETRNEMLGPDYSTKFSPWLASGSISPRYIYE--EVKS 359
G S A +NE+ +K L+ Y + +++G S SP+L G IS R++++ +K
Sbjct: 213 GWSNADKLLNEFI-EKQLID-YAKNSKKVVGNSTSL-LSPYLHFGEISVRHVFQCARMKQ 269
Query: 360 --YERERVAN--DSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQDQKLFE 415
+ R++ + +S L + R+Y R+I + + + W D F+
Sbjct: 270 IIWARDKNSEGEESADLFLRGIGLREYSRYICFNFPFTHEQSLLSHLRFFPWDADVDKFK 329
Query: 416 SWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAEWFETCLLDYD 475
+WR G TGYPL+DA M+EL TG+M NR R I SF V+ + + W+ G ++F LLD D
Sbjct: 330 AWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDAD 389
Query: 476 -PCSNYGNWTYGAGVGNDPRE-DRYFSIPKQAQNYDREGEYVAYWLPQLKALPKERRNFP 533
C G W Y +G D E DR + Q YD EGEY+ WLP+L LP E + P
Sbjct: 390 LECDILG-WQYISGSIPDGHELDRLDNPALQGAKYDPEGEYIRQWLPELARLPTEWIHHP 448
Score = 78 (32.5 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 39/129 (30%), Positives = 56/129 (43%)
Query: 84 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECL 143
IVWFR DLR+ DN AL A V PV+ P Y P G ++ + L
Sbjct: 8 IVWFRRDLRIEDNPALAAAAHEGS-VFPVFIWCPEEEGQFY----P--GRASRWWMKQSL 60
Query: 144 ADLRKNLMNRGLNL-LIR-HGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRKNL 201
A L ++L G +L LI+ H I+ + + GA V L + V++ L
Sbjct: 61 AHLSQSLKALGSDLTLIKTHNTISAILDCIRVT-GATKVVFNHLYDPVSLVRDHTVKEKL 119
Query: 202 QQVVLSSQS 210
+ +S QS
Sbjct: 120 VERGISVQS 128
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 247 (92.0 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 71/258 (27%), Positives = 120/258 (46%)
Query: 276 DWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLG 332
D VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 206 DTYGVPSLEELGFPTEGLGPAV-WQGGETEALVRLDKHLERKAWVANYERPRMNANSLLA 264
Query: 333 PDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYG 391
T SP+L G +S R Y + R+ N + LF +L+WR++F +
Sbjct: 265 SP--TGLSPYLRFGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFF--YTAATN 320
Query: 392 NSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIAC 449
N F G P ++ W ++ + W +G TG+P IDA M +L G++ + R
Sbjct: 321 NPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVA 380
Query: 450 SFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNY 508
FL R D+ + W G F+ LLD D N G+W + + + + +
Sbjct: 381 CFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRT 440
Query: 509 DREGEYVAYWLPQLKALP 526
D G+Y+ +LP+LK P
Sbjct: 441 DPSGDYIRRYLPKLKGFP 458
Score = 123 (48.4 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN ALL A + V VY +DP + ++ G R +FL++
Sbjct: 23 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASS------SVGINRWRFLLQS 76
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
L DL +L L + G+P ++ P L K +G + + + SE ER
Sbjct: 77 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYD--SEPFGKER 127
Score = 40 (19.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 65 ETFGRYTSKALKRNGK--GVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQT 122
E FG+ A+ + K GV +V N + D + +++ + + L Y R
Sbjct: 121 EPFGKERDAAIMKMAKEAGVEVVT-ENSHTLYDLDRIIEL-NGQKPPL-TY---KRFQAL 174
Query: 123 TYHFGFPK--TGALRAQFLIECLADLRKN 149
PK GA+ +Q + C A++++N
Sbjct: 175 ISRMELPKKPVGAVSSQHMENCRAEIQEN 203
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 247 (92.0 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 71/258 (27%), Positives = 120/258 (46%)
Query: 276 DWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLG 332
D VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 206 DTYGVPSLEELGFPTEGLGPAV-WQGGETEALVRLDKHLERKAWVANYERPRMNANSLLA 264
Query: 333 PDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYG 391
T SP+L G +S R Y + R+ N + LF +L+WR++F +
Sbjct: 265 SP--TGLSPYLRFGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFF--YTAATN 320
Query: 392 NSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIAC 449
N F G P ++ W ++ + W +G TG+P IDA M +L G++ + R
Sbjct: 321 NPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVA 380
Query: 450 SFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNY 508
FL R D+ + W G F+ LLD D N G+W + + + + +
Sbjct: 381 CFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRT 440
Query: 509 DREGEYVAYWLPQLKALP 526
D G+Y+ +LP+LK P
Sbjct: 441 DPSGDYIRRYLPKLKGFP 458
Score = 123 (48.4 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN ALL A + V VY +DP + ++ G R +FL++
Sbjct: 23 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASS------SVGINRWRFLLQS 76
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
L DL +L L + G+P ++ P L K +G + + + SE ER
Sbjct: 77 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYD--SEPFGKER 127
Score = 40 (19.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 65 ETFGRYTSKALKRNGK--GVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQT 122
E FG+ A+ + K GV +V N + D + +++ + + L Y R
Sbjct: 121 EPFGKERDAAIMKMAKEAGVEVVT-ENSHTLYDLDRIIEL-NGQKPPL-TY---KRFQAL 174
Query: 123 TYHFGFPK--TGALRAQFLIECLADLRKN 149
PK GA+ +Q + C A++++N
Sbjct: 175 ISRMELPKKPVGAVSSQHMENCRAEIQEN 203
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 246 (91.7 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 69/254 (27%), Positives = 119/254 (46%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 231 VPSLEELGFPTEGLGPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP-- 287
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y + ++ N + LF +L+WR++F + N F
Sbjct: 288 TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF--YTAATNNPRF 345
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 346 DRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 405
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREG 512
R D+ + W G F+ LLD D N G+W + + + + + D G
Sbjct: 406 RGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSG 465
Query: 513 EYVAYWLPQLKALP 526
+Y+ +LP+LK P
Sbjct: 466 DYIRRYLPKLKGFP 479
Score = 122 (48.0 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 71 TSKALKRNGKGVAIV-WFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFP 129
+S A +G + V WFR LR+ DN ALL A + V VY +DP + ++
Sbjct: 31 SSPAPAAGAEGASSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASS------ 84
Query: 130 KTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSE 189
G R +FL++ L DL +L L + G+P ++ P ++ +G + + + SE
Sbjct: 85 SVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPGYSREWGVTRLTFEYD--SE 142
Query: 190 ELNVER 195
ER
Sbjct: 143 PFGKER 148
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 243 (90.6 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 70/258 (27%), Positives = 119/258 (46%)
Query: 276 DWGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLG 332
D VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 207 DTYGVPSLEELGFPTEGLGPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLA 265
Query: 333 PDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYG 391
T SP+L G +S R Y + ++ N + LF +L+WR++F +
Sbjct: 266 SP--TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF--YTAATN 321
Query: 392 NSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIAC 449
N F G P ++ W ++ + W +G TG+P IDA M +L G++ + R
Sbjct: 322 NPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVA 381
Query: 450 SFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNY 508
FL R D+ + W G F+ LLD D N G+W + + + + +
Sbjct: 382 CFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRT 441
Query: 509 DREGEYVAYWLPQLKALP 526
D G+Y+ +LP LK P
Sbjct: 442 DPSGDYIRRYLPILKGFP 459
Score = 123 (48.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN ALL A + V VY +DP + ++ G R +FL++
Sbjct: 24 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASS------SVGINRWRFLLQS 77
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
L DL +L L + G+P ++ P L K +G + + + SE ER
Sbjct: 78 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYD--SEPFGKER 128
Score = 37 (18.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 65 ETFGRYTSKALKRNGK--GVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQT 122
E FG+ A+ + K GV +V N + D + +++ + + L Y R
Sbjct: 122 EPFGKERDAAIMKMAKEAGVEVVT-ENSHTLYDLDKIIEL-NGQKPPL-TY---KRFQAI 175
Query: 123 TYHFGFPK--TGALRAQFLIECLADLRKN 149
PK G++ +Q + C AD++ N
Sbjct: 176 ISRMELPKKPVGSVTSQQMESCRADIQDN 204
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 315 (115.9 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 121/466 (25%), Positives = 204/466 (43%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + + + + GGE+ AL R
Sbjct: 164 EIPVETITSEV-IEKCTTPLSDDHDEKYG-VPSLEELGFDTDGLPSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAY-WLPQLKALP 526
W + + ++ + P + D G+Y+ +LP L+ P
Sbjct: 397 WMW-LSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRRYLPVLRGFP 441
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 314 (115.6 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 116/460 (25%), Positives = 204/460 (44%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN AL A + + +Y +DP + ++ G R +FL++
Sbjct: 14 SVHWFRRGLRLHDNPALQAALRGAASLRCIYILDPWFAASS------AVGINRWRFLLQS 67
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRKNLQ 202
L DL +L L + G+P ++ P L K +G + + + SE ER +
Sbjct: 68 LEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLAFEYD--SEPFGKER----DAA 121
Query: 203 QVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSIEAKCTVRGC 261
+ L+ ++ ++ + T+Y+LD I + + P Y F+ I +
Sbjct: 122 IIKLAKEAG------VEVVIENSHTLYNLDRIIELNGNKPPLTYKRFQAIISRMELPKKP 175
Query: 262 IRIPSSFGPPPSVVD--------WGSVPLIEQLELHSPKVSKGMRFVGGESAALGRVNEY 313
+ S VD +G VP +E+L + ++ + + GGE+ AL R++++
Sbjct: 176 VSSIVSQQMETCKVDIQENHDDVYG-VPSLEELGFPTDGLAPAV-WQGGETEALARLDKH 233
Query: 314 FWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDST 370
+K + Y+ R N +L T SP+L G +S R Y + ++ N +
Sbjct: 234 LERKAWVANYERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYYRLWELYKKVKRNSTP 291
Query: 371 YWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLI 427
L+ +L+WR++F + N F G P ++ W ++ + W +G TG+P I
Sbjct: 292 PLSLYGQLLWREFF--YTAATNNPKFDRMEGNPICIQIPWDKNPEALAKWAEGKTGFPWI 349
Query: 428 DANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYG 486
DA M +L G++ + R FL R D+ I W G F+ LLD D N G+W +
Sbjct: 350 DAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWL 409
Query: 487 AGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALP 526
+ + + + D G+YV +LP+LK P
Sbjct: 410 SCSAFFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFP 449
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 310 (114.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 123/462 (26%), Positives = 202/462 (43%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
+I WFR LR+ DN AL +A ++ V VY +DP + G G R +FL++C
Sbjct: 5 SIHWFRKGLRLHDNPALQEAVRGADTVRCVYFLDP------WFAGSSNLGVNRWRFLLQC 58
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRKNLQ 202
L DL NL L + G+P + P L K + + + + SE ER ++
Sbjct: 59 LDDLDSNLRKLNSRLFVVRGQPANVFPRLFKEWKISRLTFEYD--SEPFGKERDAA--IK 114
Query: 203 QVVLSSQSND-KSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSIEAKCTVRG 260
++ + + T+H T+Y+LD I + P Y F+ I
Sbjct: 115 KLAMEAGVEVIVKTSH---------TLYNLDKIIELNGGQPPLTYKRFQTLISRMDPPEM 165
Query: 261 CIRIPSS--FG--PPPSVVDWGS---VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEY 313
+ S+ G P D G VP +E+L + + + GGE+ AL R+ +
Sbjct: 166 PVETLSNSIMGCCVTPVSEDHGDKYGVPSLEELGFDIEGLPSAV-WPGGETEALTRIERH 224
Query: 314 FWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDST 370
+K + ++ R N +L T SP+L G +S R Y ++ R +V ST
Sbjct: 225 LERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYR-KVKKTST 281
Query: 371 YWV-LF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPL 426
+ L+ +L+WR++F + N F G P + W ++ + W + TG+P
Sbjct: 282 PPLSLYGQLLWREFFYTAATT--NPRFDKMEGNPICVRIPWDKNPEALAKWAEAKTGFPW 339
Query: 427 IDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTY 485
IDA M +L G++ + R FL R D+ I W G + FE LLD D N G+W +
Sbjct: 340 IDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMW 399
Query: 486 GAGVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
+ ++ + P + D G+++ +LP L+ P
Sbjct: 400 -LSCSSFFQQFFHCYCPVGFGRRTDPNGDFIRRYLPILRGFP 440
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 308 (113.5 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 119/460 (25%), Positives = 202/460 (43%)
Query: 86 WFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLAD 145
WFR LR+ DN +L + ++ + VY +DP + G G R +FL++CL D
Sbjct: 8 WFRKGLRLHDNPSLRDSIKGADNLRCVYILDP------WFAGSSNVGISRWRFLLQCLED 61
Query: 146 LRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER--LVRKNLQQ 203
L +L L + G+P ++ P L K + + + + SE +R +RK
Sbjct: 62 LDASLRKLNSRLFVIRGQPTDVFPRLFKEWKISRLSYEYD--SEPFGKDRDAAIRK---- 115
Query: 204 VVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFRKSIEAKCTVRG-- 260
L++++ ++ + T+Y LD I F+ P Y F+ I V
Sbjct: 116 --LATEAG------VEVFVRISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMDPVEMPA 167
Query: 261 ---CIRIPSSFGPPPSVVDWGS---VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYF 314
I P S D + VP +E+L + +S + + GGE+ AL R+ +
Sbjct: 168 ETITAEIMGKCSTPVSD-DHDNKFGVPSLEELGFETEGLSTAV-WPGGETEALTRLERHL 225
Query: 315 WKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVANDSTY 371
+K + ++ R N +L T SP+L G +S R Y ++ R+ N +
Sbjct: 226 ERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSTPS 283
Query: 372 WVLF-ELMWRDYFRFISLKYGNSLFHLG--GPRKLEYKWSQDQKLFESWRDGCTGYPLID 428
L+ +L+WR++F + N F P ++ W ++ + W +G TG+P ID
Sbjct: 284 LSLYGQLLWREFF--YTAATNNPHFDKMEFNPICVQIPWDRNPEALAKWAEGQTGFPWID 341
Query: 429 ANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGA 487
A M +L G++ + R FL R D+ I W G + FE LLD D N G+W +
Sbjct: 342 AIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMW-L 400
Query: 488 GVGNDPREDRYFSIPKQ-AQNYDREGEYVAYWLPQLKALP 526
+ ++ + P + D G+Y+ +LP L+ P
Sbjct: 401 SCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPILRGFP 440
Score = 37 (18.1 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 529 RRNFPGGSYIEQIVSLKHG 547
RR P G YI + + + G
Sbjct: 420 RRTDPNGDYIRRYLPILRG 438
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 202 (76.2 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 45/132 (34%), Positives = 72/132 (54%)
Query: 401 RKLEYKWSQDQ--KLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQ-IACSFLVRD-M 456
RK EY+ +Q F W G TG+P IDA M++L + G++ + GR +AC FL R
Sbjct: 372 RKFEYEVDSEQAESWFRRWEAGQTGFPWIDALMRQLRVEGWIHHLGRHSVAC-FLTRGGC 430
Query: 457 GIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVA 516
+ W G + FE LLD++P N GNW + + + R +S + +D +G ++
Sbjct: 431 YVSWERGLDVFEELLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPISFGKKWDPDGTFIR 490
Query: 517 YWLPQLKALPKE 528
W+P+L +L K+
Sbjct: 491 KWVPELASLDKK 502
Score = 133 (51.9 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 79 GKGVAIVWFRNDLRVLDNEALLKAWDSSEMVL-PVYCVDPRHSQTTYHFGFPKTGAL-RA 136
G I WFR DLR+ D+ AL A D VL P++ DP H+ + G L R
Sbjct: 2 GSARVIYWFRTDLRLHDSPALQAALDLDPAVLWPIFTWDP-------HYVYRSRGGLNRW 54
Query: 137 QFLIECLADLRKNL--MNRGLNLLIRHGKPEEIIPSLAKSFGA-HAVYAQKETCSEELNV 193
Q+L++C DL ++ +N L + P+ + P L K++ H V+ +K+T +
Sbjct: 55 QYLLDCQNDLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVF-EKDTDAYARQR 113
Query: 194 ERLVRKNLQ 202
+ +V+K Q
Sbjct: 114 DEVVKKAAQ 122
Score = 60 (26.2 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 31/129 (24%), Positives = 55/129 (42%)
Query: 233 DIPFDHS-SLPDVYTHFRKSIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLELHSP 291
++P D + LPDV + AK G + + P D+ ++ +E+L + P
Sbjct: 182 EMPLDFNLDLPDVGQDYN----AKWRSEGKEKAYGAIAGPNG--DF-AIETLEELG-YPP 233
Query: 292 KVSKGMRFVGGESAALGRVNEYFWKKDLLKVYK--ETRNEMLGPDYSTKFSPWLASGSIS 349
+ + GGES AL ++ + ++ +T P +T SP + GS+S
Sbjct: 234 ATTP---YKGGESLALRELDAIIENQVYTATFRKPQTSPAAFEPQSTTLLSPAMHFGSLS 290
Query: 350 PRYIYEEVK 358
R Y V+
Sbjct: 291 VRLFYHRVQ 299
Score = 47 (21.6 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 43/168 (25%), Positives = 71/168 (42%)
Query: 125 HFGFPKTGAL-RAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSL-AKSFGAHAVYA 182
H+ + G L R Q+L++C DL ++ N LN + E SL K F A V
Sbjct: 42 HYVYRSRGGLNRWQYLLDCQNDLSASITN--LNPRSKLFVLREAPQSLFPKLFKAWKV-- 97
Query: 183 QKETCSEELNVERLVRKNLQQVVLSSQSNDKSTNHPQLKLI--WGTTMYHLDDIPFDHSS 240
E+ + + R+ +VV K+ +K+I +G T++ D I +
Sbjct: 98 -THLVFEK-DTDAYARQR-DEVV------KKAAQAAGVKVITRYGRTLWDSDAIVKANGG 148
Query: 241 LPDVYTHFRKSIEAKCTVRGCIRIPSSFGPPPSVVDWGSVPLIEQLEL 288
P + +++ AK G I P P ++ D G +PL L+L
Sbjct: 149 EPTMSMARLRTVGAKV---GSI--PRPIPAPKALPDPGEMPLDFNLDL 191
Score = 45 (20.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 333 PD--YSTKFSPWLASGSISPRYIYEEVKSYERE 363
PD + K+ P LAS + +YIYE K+ E E
Sbjct: 484 PDGTFIRKWVPELAS--LDKKYIYEPWKAPEAE 514
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 278 (102.9 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 113/464 (24%), Positives = 197/464 (42%)
Query: 81 GV-AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
GV A+ WFR LR+ DN AL + ++ + VY +DP + G G R +FL
Sbjct: 2 GVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP------WFAGSSNVGINRWRFL 55
Query: 140 IECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLVRK 199
++CL DL NL L + G+P ++ P L K + + + + SE ER
Sbjct: 56 LQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYD--SEPFGKER---- 109
Query: 200 NLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDI-PFDHSSLPDVYTHFR------KSI 252
+ + + ++ + T+Y LD I + P Y F+ + +
Sbjct: 110 ---DAAIKKLATEAGV---EVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPL 163
Query: 253 EAKC-TVRGCIRIPSSFGPPPSVVD--WGSVPLIEQLELHSPKVSKGMRFVGGESAALGR 309
E T+ + I P D +G VP +E+L + + + + GGE+ AL R
Sbjct: 164 EIPVETITSEV-IEKCTTPLSDDHDEKYG-VPSLEELGFDTDGLPSAV-WPGGETEALTR 220
Query: 310 VNEYFWKKDLLKVYKETR---NEMLGPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
+ + +K + ++ R N +L T SP+L G +S R Y ++ ++
Sbjct: 221 LERHLERKAWVANFERPRMNANSLLASP--TGLSPYLRFGCLSCRLFYFKLTDLYKKVKK 278
Query: 367 NDSTYWVLF-ELMWRDYFRFISLKYGNSLFHL--GGPRKLEYKWSQDQKLFESWRDGCTG 423
N S L+ +L+WR++F + N F G P ++ W ++ + W +G TG
Sbjct: 279 NSSPPLSLYGQLLWREFF--YTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTG 336
Query: 424 YPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGAEWFETCLLDYDPCSNYGN 482
+P IDA M +L G++ + R FL R D+ I W G + + L+Y N +
Sbjct: 337 FPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVKKHLFLNYRESVNLKS 396
Query: 483 WTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKALP 526
+ + + + +S + +G +LP L+ P
Sbjct: 397 FQWLNQPTHQHQVVHEYSPLLMGSRDEEKGNNKRRYLPVLRGFP 440
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 207 (77.9 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 67/256 (26%), Positives = 117/256 (45%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKET--RNEM-LGPDYS 336
VPL+E+L + ++ + + GGES AL R+ + D ++E R +M P +
Sbjct: 192 VPLLEELGFDTEGLAPAV-WPGGESEALKRMERHLGP-DSTVAWQENFERPKMNASPLMA 249
Query: 337 TKF--SPWLASGSISPRYIYEEVKSYERERVANDSTYWVLFE-LMWRDYFRFISLKYGNS 393
+ SP+L G +S R Y ++ ++ N + L++ ++WR++F + N
Sbjct: 250 SPLGLSPYLRFGCLSCRLFYCKLTQLYKKVKKNMNPSISLYDKILWREFF--YTAATNNP 307
Query: 394 LFHL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSF 451
F G P + W ++ + W + TG+P IDA M +L G++ + R F
Sbjct: 308 RFDRMEGNPICIRIPWDRNAEALAKWAEAKTGFPWIDAIMMQLRQEGWIHHLARHAVACF 367
Query: 452 LVR-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDR 510
L R D+ I W G + FE LLD D N G+W + + + + D
Sbjct: 368 LTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRIDP 427
Query: 511 EGEYVAYWLPQLKALP 526
G+++ +LP L+ P
Sbjct: 428 NGDFIRRYLPVLRDFP 443
Score = 122 (48.0 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 31/93 (33%), Positives = 49/93 (52%)
Query: 83 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIEC 142
++ WFR LR+ DN ALL+A + ++ + VY +DP + G G R +FL++
Sbjct: 5 SVHWFRKGLRLHDNPALLEALNGADTLRCVYFLDP------WFAGASNLGVNRWRFLLQS 58
Query: 143 LADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSF 175
L DL +L L + G+P +I P L K +
Sbjct: 59 LEDLDASLRKLNSCLFVIRGQPADIFPRLFKEW 91
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 246 (91.7 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 69/254 (27%), Positives = 119/254 (46%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + + + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 228 VPSLEELGFPTEGLGPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP-- 284
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y + ++ N + LF +L+WR++F + N F
Sbjct: 285 TGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF--YTAATNNPRF 342
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 343 DRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 402
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREG 512
R D+ + W G F+ LLD D N G+W + + + + + D G
Sbjct: 403 RGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSG 462
Query: 513 EYVAYWLPQLKALP 526
+Y+ +LP+LK P
Sbjct: 463 DYIRRYLPKLKGFP 476
Score = 78 (32.5 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 SKALKRNGKGVAIV-WFRNDLRVLDNEALLKAWDSSEMVLPVYCVDP 117
++A G G + V WFR LR+ DN ALL A + V VY +DP
Sbjct: 29 TQAPAARGDGASSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDP 75
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 246 (91.7 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 70/254 (27%), Positives = 120/254 (47%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + ++ + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 150 VPSLEELGFPTDGLAPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP-- 206
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y + ++ N + L+ +L+WR++F + N F
Sbjct: 207 TGLSPYLRFGCLSCRLFYYHLWELYKKVKRNSTPPLSLYGQLLWREFF--YTAATNNPKF 264
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 265 DRMEGNPICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 324
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREG 512
R D+ I W G F+ LLD D N G+W + + + + + D G
Sbjct: 325 RGDLWISWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSG 384
Query: 513 EYVAYWLPQLKALP 526
+YV +LP+LK P
Sbjct: 385 DYVKRYLPKLKGFP 398
Score = 72 (30.4 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 132 GALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEEL 191
G R +FL++ L DL +L L + G+P ++ P L K +G + + + SE
Sbjct: 6 GINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYD--SEPF 63
Query: 192 NVER 195
ER
Sbjct: 64 GKER 67
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 246 (91.7 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 70/254 (27%), Positives = 120/254 (47%)
Query: 280 VPLIEQLELHSPKVSKGMRFVGGESAALGRVNEYFWKKDLLKVYKETR---NEMLGPDYS 336
VP +E+L + ++ + + GGE+ AL R++++ +K + Y+ R N +L
Sbjct: 156 VPSLEELGFPTDGLAPAV-WQGGETEALARLDKHLERKAWVANYERPRMNANSLLASP-- 212
Query: 337 TKFSPWLASGSISPRYIYEEVKSYERERVANDSTYWVLF-ELMWRDYFRFISLKYGNSLF 395
T SP+L G +S R Y + ++ N + L+ +L+WR++F + N F
Sbjct: 213 TGLSPYLRFGCLSCRLFYYHLWELYKKVKRNSTPPLSLYGQLLWREFF--YTAATNNPKF 270
Query: 396 HL--GGPRKLEYKWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLV 453
G P ++ W ++ + W +G TG+P IDA M +L G++ + R FL
Sbjct: 271 DRMEGNPICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 330
Query: 454 R-DMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREG 512
R D+ I W G F+ LLD D N G+W + + + + + D G
Sbjct: 331 RGDLWISWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSG 390
Query: 513 EYVAYWLPQLKALP 526
+YV +LP+LK P
Sbjct: 391 DYVKRYLPKLKGFP 404
Score = 72 (30.4 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 132 GALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEEL 191
G R +FL++ L DL +L L + G+P ++ P L K +G + + + SE
Sbjct: 12 GINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYD--SEPF 69
Query: 192 NVER 195
ER
Sbjct: 70 GKER 73
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 200 (75.5 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 57/175 (32%), Positives = 86/175 (49%)
Query: 376 ELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQ-DQKLFESWRDGCTGYPLIDANMKEL 434
+L+WR+YF +S+ N G L W++ D+ L + WR G TG+PLID M++L
Sbjct: 311 QLIWREYFYTMSVNNPNYDRMEGNEICLTIPWAKPDENLLQRWRLGQTGFPLIDGAMRQL 370
Query: 435 SMTGFMSNRGRQIACSFLVRDMGI--DWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGND 492
G++ + R +FL R G+ W G + F LLD D GNW + + +
Sbjct: 371 LAEGWLHHTLRNTVATFLTRG-GLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSSAFE 429
Query: 493 PREDRYF-SIPKQ-AQNYDREGEYVAYWLPQLKALPKERRNFPGGSYIEQIVSLK 545
D + P A+ D EG Y+ ++P+LK LPKE + P EQ V +
Sbjct: 430 RLLDSSLVTCPVALAKRLDPEGVYIRRYVPELKNLPKEYIHEPWRLSAEQQVKFE 484
Score = 109 (43.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 80 KGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFL 139
+G ++WFR+ LR+ DN ALL A + + +P+ V ++ G G R +FL
Sbjct: 4 RGANVLWFRHGLRLHDNPALLAALEEKDQGIPLIPVFIFDGESA---GTKSVGYNRMRFL 60
Query: 140 IECLADLRKNLMN----RGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
++ L DL + L + RG L + G+P I L + H + A+ + C N ER
Sbjct: 61 LDSLQDLDEQLQSATEGRG-RLFVFEGEPTLIFRRLHEQVRLHKICAELD-CEPIWN-ER 117
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 216 (81.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 75/252 (29%), Positives = 119/252 (47%)
Query: 290 SPKVSKGMRFVGGESAALGRVNEYFWKKD--LLKVY---KETRNEMLGPDYSTKFSPWLA 344
+P +S +++GGE+ AL + +++ L Y + + E L P T S L
Sbjct: 214 NPDISH-QQWMGGETKALECLGHRLKQEEEAFLGGYFLPTQAKPEFLVPP--TSMSAALR 270
Query: 345 SGSISPRYIYEEVKS-YER----ERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGG 399
G +S R Y V YE+ + N + +L+WR+YF +S+ +
Sbjct: 271 FGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHITGQLIWREYFYTMSVHNPHYAEMEAN 330
Query: 400 PRKLEYKWSQ--DQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRD-M 456
P L W + D L + W++G TG+P+IDA M++L G++ + R I +FL R +
Sbjct: 331 PICLNIPWYEPKDDSL-DRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGAL 389
Query: 457 GIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYF-SIP-KQAQNYDREGEY 514
I W G + F LLD D GNW + + + D + P A+ D +GEY
Sbjct: 390 WISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPIALARRLDPKGEY 449
Query: 515 VAYWLPQLKALP 526
V +LP+LK LP
Sbjct: 450 VRRYLPELKNLP 461
Score = 91 (37.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 32/94 (34%), Positives = 47/94 (50%)
Query: 84 IVWFRNDLRVLDNEALLKAWDS----SEMV--LPVYCVDPRHSQTTYHFGFPKTGALRAQ 137
I+WFR+ LR+ DN +LL+A + SE V P++ D + T GF R +
Sbjct: 6 ILWFRHGLRLHDNPSLLEALRNDGTGSESVRLYPIFIFDGESAGTKL-VGFN-----RMK 59
Query: 138 FLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSL 171
FL+E LADL + L G L + G ++ L
Sbjct: 60 FLLESLADLDRQLREIGGQLYVFKGNAVNVMRRL 93
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 190 (71.9 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 53/170 (31%), Positives = 84/170 (49%)
Query: 376 ELMWRDYFRFISLKYGNSLFHLGGPRKLEYKWSQ-DQKLFESWRDGCTGYPLIDANMKEL 434
+L+WR+YF +S+ N G L W++ ++ L +SWR G TG+PLID M++L
Sbjct: 311 QLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQL 370
Query: 435 SMTGFMSNRGRQIACSFLVRDMGI--DWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGND 492
G++ + R +FL R G+ W G + F LLD D GNW + + +
Sbjct: 371 LAEGWLHHTLRNTVATFLTRG-GLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFE 429
Query: 493 PREDRYF-SIPKQ-AQNYDREGEYVAYWLPQLKALPKERRNFPGGSYIEQ 540
D + P A+ D +G Y+ ++P+L +PKE + P EQ
Sbjct: 430 RLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQ 479
Score = 107 (42.7 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 80 KGVAIVWFRNDLRVLDNEALLKAW---DSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRA 136
+G ++WFR+ LR+ DN ALL A D ++PV+ D + G G R
Sbjct: 4 RGANVIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESA------GTKNVGYNRM 57
Query: 137 QFLIECLADLRKNLM----NRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELN 192
+FL++ L D+ L RG LL+ G+P I L + H + +++ C N
Sbjct: 58 RFLLDSLQDIDDQLQAATDGRG-RLLVFEGEPAYIFRRLHEQVRLHRICIEQD-CEPIWN 115
Query: 193 VER 195
ER
Sbjct: 116 -ER 117
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 242 (90.2 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 120/492 (24%), Positives = 211/492 (42%)
Query: 84 IVWFRNDLRVLDNEALLKAW------DSSEMV--LPVYCVDPRHSQTTYHFGFPKTGALR 135
I+WFR+ LR+ DN +LL+A SSE V P++ D + T G R
Sbjct: 6 ILWFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRI------VGYNR 59
Query: 136 AQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 195
+FL+E LADL + + G LL+ G ++ L + K+ C E+ + E
Sbjct: 60 MKFLLESLADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNI------KKLCYEQ-DCEP 112
Query: 196 LVRKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIEAK 255
+ ++ V ++ D +W ++ I + P Y F ++
Sbjct: 113 IWKERDDAVAKLCRTMDVRCVENVSHTLWNP----IEVIQTNGDIPPLTYQMFLHTVNII 168
Query: 256 CTVRGCIRIPS----SFGPPPSVVDWGSVPLIEQLE------LHSPKVSK--GMRFVGGE 303
+ P+ FG P+++ + L +Q+ +H ++ +++GGE
Sbjct: 169 GDPPRPVGAPNFEYVEFGRVPALLA-SELKLCQQMPAPDDFGIHYDGNARIAFQKWIGGE 227
Query: 304 SAALGRVNEYFWKKD--LLKVY---KETRNEMLGPDYSTKFSPWLASGSISPRYIYEEV- 357
+ AL + +++ + Y + + E+LGP +T S L G +S R Y V
Sbjct: 228 TRALEALGARLKQEEEAFREGYYLPTQAKPEILGP--ATSMSAALRFGCLSVRMFYWCVH 285
Query: 358 ----KSYERERVANDSTYWVLFELMWRDYFRFISLKYGNSLFHLGGPRKLEYKW--SQDQ 411
K + + + +L+WR+YF +S++ + P L W +D
Sbjct: 286 DLFAKVQSNSQFKYPGGHHITGQLIWREYFYTMSVQNPHYGEMERNPICLNIPWYKPEDD 345
Query: 412 KLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRD-MGIDWRMGAEWFETC 470
L W++G TG+P+IDA M++L G++ + R I +FL R + + W G + F
Sbjct: 346 SLTR-WKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGGLWLSWEEGLQHFLKY 404
Query: 471 LLDYDPCSNYGNWTYGAGVGNDPREDRY-FSIP-KQAQNYDREGEYVAYWLPQLKALPKE 528
LLD D GNW + + + D + P A+ D +G+YV +LP+L P +
Sbjct: 405 LLDADWSVCAGNWMWVSSSAFERLLDSSKCTCPIALARRLDPKGDYVKRYLPELANYPAQ 464
Query: 529 RRNFPGGSYIEQ 540
+ P + EQ
Sbjct: 465 FVHEPWKASREQ 476
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 211 (79.3 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 45/123 (36%), Positives = 64/123 (52%)
Query: 406 KWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRDMGIDWRMGAE 465
+WS D ++W+ G TGYPL+DA M++L TG+M+N R + SFL+ + W+ G
Sbjct: 3 RWSSDHAHLKAWQRGRTGYPLVDAAMRQLWQTGWMNNYMRHVVASFLIAYLHFPWQEGYR 62
Query: 466 WFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKAL 525
WF+ L+D D + W G G D I A D G +V W P+LKAL
Sbjct: 63 WFQDTLVDADVAIDAMMWQNGGMCGLDHWNFVMHPIDA-ALTCDPCGTFVRQWCPELKAL 121
Query: 526 PKE 528
P +
Sbjct: 122 PDD 124
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 189 (71.6 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 42/124 (33%), Positives = 61/124 (49%)
Query: 406 KWSQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVR-DMGIDWRMGA 464
+W +D + W+ TG+P IDA M +L G++ + R A FL R D+ I W G
Sbjct: 1 RWYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGM 60
Query: 465 EWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDREGEYVAYWLPQLKA 524
+ FE LLD D N GNW + + R F + + D EG+Y+ +LP LK
Sbjct: 61 KVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQYIRKYLPILKN 120
Query: 525 LPKE 528
P +
Sbjct: 121 FPSK 124
>TAIR|locus:2122654 [details] [associations]
symbol:AT4G25290 species:3702 "Arabidopsis thaliana"
[GO:0003913 "DNA photolyase activity" evidence=IEA;ISS] [GO:0006281
"DNA repair" evidence=IEA;ISS] InterPro:IPR006050
InterPro:IPR000073 Pfam:PF00875 EMBL:CP002687 GO:GO:0006281
PRINTS:PR00111 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 IPI:IPI00518108 RefSeq:NP_194259.4 UniGene:At.44762
ProteinModelPortal:F4JSJ6 SMR:F4JSJ6 PRIDE:F4JSJ6
EnsemblPlants:AT4G25290.1 GeneID:828632 KEGG:ath:AT4G25290
OMA:VHGFGAF Uniprot:F4JSJ6
Length = 692
Score = 203 (76.5 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 65/210 (30%), Positives = 101/210 (48%)
Query: 78 NGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQ 137
N A+VWF++DLRV D+ LL A V+P+Y +D R + Y T L +
Sbjct: 32 NEGSTAVVWFKHDLRVDDHPGLLAA-SKHRAVIPLYVLD-RRILSRY-----TTDTL--E 82
Query: 138 FLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLV 197
I L DLRK L +G NL++R+G E +I L K A V+ ++E V V
Sbjct: 83 LAIIALEDLRKTLKKQGSNLMLRYGNAENVIEDLVKEVRAPFVFVEEEVEYHLCEVLDAV 142
Query: 198 RKNLQQVVLSSQSNDKSTNHPQLKLIWGTTMYHLDDIPFDHSSLPDVYTHFRKSIEAKCT 257
+ L+ V LS +S P++ + W T Y ++ + LP + F+K ++ T
Sbjct: 143 KNKLEGVSLSGES-------PRI-VAWRTPFYESQNL----TDLPQSWEEFKK-LKLPLT 189
Query: 258 VRGCIRIPSSFGPPPSVVDWGSVPLIEQLE 287
+ + F P S + WGSVP ++ L+
Sbjct: 190 LPVPA---AKFSSPGSELQWGSVPTLDDLK 216
Score = 57 (25.1 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 332 GPDYSTKFSPWLASGSISPRYIYEEVKSYERERVA 366
G + F P L G +S R ++ E YE+ER A
Sbjct: 320 GASFFKLFGPVLCLGIVSRRSVHYEAIEYEKERNA 354
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 205 (77.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 72/245 (29%), Positives = 116/245 (47%)
Query: 298 RFVGGESAALGRVNEYFWKKD--LLKVY---KETRNEMLGPDYSTKFSPWLASGSISPRY 352
R+ GGE+ AL + +++ + Y + R + L P S S L G +S R
Sbjct: 175 RWTGGEAKALELLGRRLKQEEEAFREGYYLPTQARPDFLAPPSS--MSAALRFGCLSVRM 232
Query: 353 IYEEVKS-YERERVAND----STYWVLFELMWRDYFRFISLKYGN-SLFHLGGPRKLEYK 406
Y V + R + N + + +L+WR+YF +S+ + ++ L P L
Sbjct: 233 FYWCVHDLFARVQANNQLKHPGGHHITGQLIWREYFYTMSVHNPHYAVMELN-PICLNIP 291
Query: 407 W--SQDQKLFESWRDGCTGYPLIDANMKELSMTGFMSNRGRQIACSFLVRD-MGIDWRMG 463
W ++D L + W++G TG+PLIDA M++L G++ + R I +FL R + I W G
Sbjct: 292 WYEAKDDSL-DRWKEGRTGFPLIDAAMRQLMAEGWLHHILRNITATFLTRGGLWISWEAG 350
Query: 464 AEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYF--SIPKQAQNYDREGEYVAYWLPQ 521
+ F LLD D GNW + + + D S A+ D +GEYV +LP+
Sbjct: 351 VQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPVALARRLDPKGEYVKRYLPE 410
Query: 522 LKALP 526
L+ P
Sbjct: 411 LEKFP 415
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 577 577 0.00081 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 631 (67 KB)
Total size of DFA: 376 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.34u 0.11s 50.45t Elapsed: 00:00:02
Total cpu time: 50.36u 0.11s 50.47t Elapsed: 00:00:02
Start: Fri May 10 11:37:15 2013 End: Fri May 10 11:37:17 2013